Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0002215

Physical Location & Seq

Genomic Coordinates Forward (+)

16350682 .. 16356014

Gene Structure 5333 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00013290.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1494 bp

ATGTTTCCTAATTTCTTTACTTGTTGCTCGCTTCTTGAAACTTCAAGGGAGAAGAAGAAGAACATGGTGATCACCCACCGGAATCAGAATCTGGAAAAAGTGAAATTAGAAGTTGACCCACAGTTGCTCTACTTCTATGTAAAACCAATGGGCTCCAGGAAGCAAACAGAATTGTCTCTACGATCAGAAATGGTCAAGCCGAGGACAAAAGGCGGAATGGCCTCCTCCGGCAGGAACAGAAGTTCCGGGGACCTCGCCTATTATCGCGGCACAAGAGACCAGGAAGCATACAAGACTCACGATGAAGATGAAGAAGAGGATCAGGAGGAGATGGGAATGGAGTTCGTAATTATGACAGAAGTGTTCAACGCCGTTTCAGCCATGACAATTGCATACGTGAGCCTACAAGAGGCCCACAACCCGTGGGACCCGGAGAAGCTGAGGGCGGCTGACGTGGCGGTGGTGGGGGAGCTGAGAAGGCTGGGAGACTTAAGAGAGAGGTACTTGAGGAGAAGATGTTACGGCGGAGGTAGTGGTGATGTGCTGAGGGAGGCGGTGGTGCCGTACGAGGCGGCAATCGAGGAGCTGAAGAAAGAGGTGAAGGGTAGAGATATGGAGGTTGACAATCTGAAAGAGAAGCTCAAGAGCATTATTGGAGAGGCCAATAGCGGGAAGAAGAGCAGGAATTCTATGTCTAGGAGAAAGGTCCATTGCATTAGTCAAGTTTCAACAGCTCCTGCCCCAGAATTGTTCGAGGGGGCAATGAGCGGAGTTAGAGAGGCATCAGACACCTTCACTATAGTTCTCCTTTCTCTCATGCGTGCGGCTCACTGGGATATCGCTGCGGTCGTTCGCTCCATTGAAGCCACTACTGCCACAGCTACGAGGATCAGCGCTTCCTCTGTAATCCAAACTCAACGTGCCAACGCCAAGTTCGCTCTTCAGTCCTACATTTCCCGAAAAGTCTTTCAAGGCTTCGACCACGAGAGCTTCTACATGGATAACGGCCTCTCCTCAGTTCTCAGCCCAGACCAGTATCGCCGGGACTGCTTCGCCGAATATTGTGACATAAAAAACATGGACTCCACAGAGCTTCTCAATATCCAGCCCTCGTGTAACTTTGGCAAGTTTTGCTCCAACAAGTACTTGGCTATTGTTCATCCCAAGATGGAGGAGTCATTCTTCGGAGACTTGGAGCAGAGACAACAAGTTGTAGAAGGCAGGAACCCTAGGAGTCAGTTTTACAGGCAGTTCTTGGAGTTGGCTAAGGCGATGTGGTTGCTTCACTTGCTGGCGTTCTCGCTTGACCCTGCACCAAGTCAGTTTGAGGCTAGCAGAGGATCTGATTTTCATCCAGACTACATGGACAGTGTTCTCAAGTCTCCAGGACAAGTTCCTTCGGCTCAAGTTGTTGGGTTTCCCTTAATTCCAGGGTTCAAGCTTGGCAATGGGTCCATTATTAAGGCCAGAGTTTACCTTGTATCCAAGAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0008150 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009639 GO:0009959 GO:0050896

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF641

Protein Analysis

497

Amino Acids

56.18

Weight (kDa)

7.99

Isoelectric Point (pI)

47.9

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF641	PF04859	116 - 224	2.3e-29	Plant protein of unknown function (DUF641)
GIL1_IRKI_C	PF24994	442 - 492	1.7e-08	GIL1/IRKI C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002215)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58960 AT5G58960 AT5G58960
fragaria_vesca	FvH4_3g37820 FvH4_3g37850
malus_domestica	MD03G1078100.v1.1 MD11G1082800.v1.1
prunus_persica	Prupe.6G063100_v2.0.a1
pyrus_communis	pycom03g06240 pycom11g07090
rosa_chinensis	RchiOBHm_Chr5g0068001 RchiOBHm_Chr5g0068051 RchiOBHm_Chr5g0068071
rosa_laevigata	RLG00000035951 RLG00000035952
rosa_multiflora	Rmu_co8216896.1_g000001 Rmu_co8424771.1_g000001 Rmu_sc0000435.1_g000019 Rmu_sc0000435.1_g000025 Rmu_sc0000435.1_g000034
rosa_roxburghii	Rroxscaffold_1G00012550 Rroxscaffold_1G00012560 Rroxscaffold_1G00013280 Rroxscaffold_1G00013290
rosa_rugosa	Rorug05G0387200 Rorug05G0387600 Rorug05G0388100
rosa_samantha	Rh5AG446100 Rh5AG446300 Rh5AG446400 Rh5BG463600 Rh5BG464000 Rh5BG464300 Rh5CG485500 Rh5CG486000 Rh5CG486300 Rh5DG477600 Rh5DG478000 Rh5DG478300
rosa_wichuraiana	Rw5G041670 Rw5G041680 Rw5G041710 Rw5G041720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	559
AccBSI	CCGCTC	1 cut(s)	768
AccII	CGCG	1 cut(s)	267
AclWI	GGATC	3 cut(s)	327, 896, 1348
AcsI	RAATTY	1 cut(s)	685
AcuI	CTGAAG	2 cut(s)	608, 926
AfaI	GTAC	3 cut(s)	503, 566, 1145
AfeI	AGCGCT	1 cut(s)	895
AfiI	CCNNNNNNNGG	3 cut(s)	231, 409, 669
AflII	CTTAAG	1 cut(s)	490
AgsI	TTSAA	7 cut(s)	38, 45, 367, 729, 863, 971, 1438
AjiI	CACGTC	1 cut(s)	454
AjnI	CCWGG	4 cut(s)	155, 279, 1384, 1429
AjuI	GAANNNNNNNTTGG	2 cut(s)	917, 949
AloI	GAACNNNNNNTCC	4 cut(s)	226, 227, 258, 259
AluBI	AGCT	9 cut(s)	439, 472, 586, 640, 734, 881, 990, 1093, 1441
AluI	AGCT	9 cut(s)	439, 472, 586, 640, 734, 881, 990, 1093, 1441
Alw26I	GTCTC	6 cut(s)	180, 270, 480, 1182, 1195, 1386
AlwI	GGATC	3 cut(s)	327, 896, 1348
AlwNI	CAGNNNCTG	2 cut(s)	91, 737
Aor51HI	AGCGCT	1 cut(s)	895
AoxI	GGCC	5 cut(s)	219, 411, 660, 1006, 1464
ApeKI	GCWGC	1 cut(s)	842
ApoI	RAATTY	1 cut(s)	685
AspA2I	CCTAGG	1 cut(s)	1229
AspLEI	GCGC	1 cut(s)	896
AspS9I	GGNCC	5 cut(s)	250, 412, 427, 706, 1452
AsuC2I	CCSGG	3 cut(s)	247, 431, 1043
AsuHPI	GGTGA	4 cut(s)	64, 79, 548, 610
AsuNHI	GCTAGC	1 cut(s)	1331
AvaII	GGWCC	4 cut(s)	250, 427, 706, 1452
AvrII	CCTAGG	1 cut(s)	1229
BanI	GGYRCC	1 cut(s)	559
BanII	GRGCYC	1 cut(s)	155
BauI	CACGAG	2 cut(s)	983, 1111
BbvCI	CCTCAGC	2 cut(s)	440, 545
BbvI	GCAGC	1 cut(s)	829
BccI	CCATC	2 cut(s)	325, 1162
BceAI	ACGGC	4 cut(s)	356, 538, 547, 1021
BcgI	CGANNNNNNTGC	2 cut(s)	1261, 1295
BciT130I	CCWGG	4 cut(s)	157, 281, 1386, 1431
BciVI	GTATCC	1 cut(s)	1492
BclI	TGATCA	1 cut(s)	69
BcnI	CCSGG	3 cut(s)	247, 431, 1043
BcoDI	GTCTC	6 cut(s)	180, 270, 480, 1182, 1195, 1386
BfaI	CTAG	3 cut(s)	696, 1230, 1332
BfmI	CTRYAG	1 cut(s)	798
BfoI	RGCGCY	1 cut(s)	897
BfrI	CTTAAG	1 cut(s)	490
BfuI	GTATCC	1 cut(s)	1492
BisI	GCNGC	5 cut(s)	268, 447, 573, 825, 843
BlnI	CCTAGG	1 cut(s)	1229
BlsI	GCNGC	5 cut(s)	269, 448, 574, 826, 844
BmcAI	AGTACT	1 cut(s)	1145
Bme1390I	CCNGG	7 cut(s)	157, 247, 281, 431, 1043, 1386, 1431
Bme18I	GGWCC	4 cut(s)	250, 427, 706, 1452
BmgBI	CACGTC	1 cut(s)	454
BmgT120I	GGNCC	5 cut(s)	250, 412, 427, 706, 1452
BmiI	GGNNCC	7 cut(s)	154, 251, 428, 429, 561, 1226, 1453
BmrFI	CCNGG	7 cut(s)	157, 247, 281, 431, 1043, 1386, 1431
BmrI	ACTGGG	1 cut(s)	841
BmsI	GCATC	1 cut(s)	791
BmtI	GCTAGC	1 cut(s)	1335
BmuI	ACTGGG	1 cut(s)	841
BpmI	CTGGAG	2 cut(s)	139, 1368
Bpu10I	CCTNAGC	3 cut(s)	440, 545, 1266
BpuEI	CTTGAG	4 cut(s)	526, 626, 1361, 1389
BpuMI	CCSGG	3 cut(s)	247, 431, 1043
BsaAI	YACGTR	1 cut(s)	397
BsaBI	GATNNNNATC	1 cut(s)	1350
BsaI	GGTCTC	1 cut(s)	270
BsaJI	CCNNGG	5 cut(s)	200, 246, 422, 1229, 1430
BsaWI	WCCGGW	1 cut(s)	78
BsaXI	ACNNNNNCTCC	6 cut(s)	502, 532, 995, 1025, 1067, 1097
Bsc4I	CCNNNNNNNGG	3 cut(s)	231, 409, 669
Bse1I	ACTGG	2 cut(s)	836, 1033
Bse3DI	GCAATG	3 cut(s)	709, 768, 1453
Bse8I	GATNNNNATC	1 cut(s)	1350
BseBI	CCWGG	4 cut(s)	157, 281, 1386, 1431
BseDI	CCNNGG	5 cut(s)	200, 246, 422, 1229, 1430
BseGI	GGATG	2 cut(s)	1159, 1351
BseJI	GATNNNNATC	1 cut(s)	1350
BseLI	CCNNNNNNNGG	3 cut(s)	231, 409, 669
BseMI	GCAATG	3 cut(s)	709, 768, 1453
BseMII	CTCAG	5 cut(s)	431, 464, 536, 1029, 1036
BseNI	ACTGG	2 cut(s)	836, 1033
BseRI	GAGGAG	6 cut(s)	214, 341, 523, 596, 1003, 1187
BseXI	GCAGC	1 cut(s)	829
BseYI	CCCAGC	1 cut(s)	481
BsgI	GTGCAG	1 cut(s)	1296
Bsh1236I	CGCG	1 cut(s)	267
Bsh1285I	CGRYCG	1 cut(s)	849
BshFI	GGCC	5 cut(s)	221, 413, 662, 1008, 1466
BshNI	GGYRCC	1 cut(s)	559
BsiEI	CGRYCG	1 cut(s)	849
BsiSI	CCGG	5 cut(s)	79, 228, 246, 431, 1042
BsiWI	CGTACG	1 cut(s)	564
BslFI	GGGAC	3 cut(s)	263, 440, 1058
BslI	CCNNNNNNNGG	3 cut(s)	231, 409, 669
BsmAI	GTCTC	6 cut(s)	180, 270, 480, 1182, 1195, 1386
BsmFI	GGGAC	3 cut(s)	263, 440, 1058
BsnI	GGCC	5 cut(s)	221, 413, 662, 1008, 1466
Bso31I	GGTCTC	1 cut(s)	270
Bsp1286I	GDGCHC	1 cut(s)	155
Bsp143I	GATC	5 cut(s)	69, 182, 319, 888, 1340
BspANI	GGCC	5 cut(s)	221, 413, 662, 1008, 1466
BspCNI	CTCAG	5 cut(s)	432, 465, 537, 1028, 1035
BspFNI	CGCG	1 cut(s)	267
BspLI	GGNNCC	7 cut(s)	154, 251, 428, 429, 561, 1226, 1453
BspOI	GCTAGC	1 cut(s)	1335
BspPI	GGATC	3 cut(s)	327, 896, 1348
BspQI	GCTCTTC	2 cut(s)	671, 945
BspT107I	GGYRCC	1 cut(s)	559
BspTI	CTTAAG	1 cut(s)	490
BspTNI	GGTCTC	1 cut(s)	270
BsrBI	CCGCTC	1 cut(s)	768
BsrDI	GCAATG	3 cut(s)	709, 768, 1453
BsrI	ACTGG	2 cut(s)	836, 1033
BssECI	CCNNGG	5 cut(s)	200, 246, 422, 1229, 1430
BssMI	GATC	5 cut(s)	69, 182, 319, 888, 1340
BssSI	CACGAG	2 cut(s)	983, 1111
BssT1I	CCWWGG	1 cut(s)	1229
Bst2BI	CACGAG	2 cut(s)	983, 1111
Bst2UI	CCWGG	4 cut(s)	157, 281, 1386, 1431
Bst4CI	ACNGT	2 cut(s)	123, 1370
Bst6I	CTCTTC	3 cut(s)	309, 671, 945
BstAFI	CTTAAG	1 cut(s)	490
BstAPI	GCANNNNNTGC	1 cut(s)	1131
BstBAI	YACGTR	1 cut(s)	397
BstC8I	GCNNGC	4 cut(s)	29, 822, 1293, 1333
BstDEI	CTNAG	6 cut(s)	440, 473, 545, 1015, 1022, 1266
BstDSI	CCRYGG	1 cut(s)	422
BstENI	CCTNNNNNAGG	2 cut(s)	229, 407
BstF5I	GGATG	2 cut(s)	1159, 1351
BstFNI	CGCG	1 cut(s)	267
BstH2I	RGCGCY	1 cut(s)	897
BstHHI	GCGC	1 cut(s)	896
BstKTI	GATC	5 cut(s)	72, 185, 322, 891, 1343
BstMAI	GTCTC	6 cut(s)	180, 270, 480, 1182, 1195, 1386
BstMBI	GATC	5 cut(s)	69, 182, 319, 888, 1340
BstMCI	CGRYCG	1 cut(s)	849
BstMWI	GCNNNNNNNGC	8 cut(s)	377, 455, 478, 872, 935, 1047, 1131, 1288
BstNI	CCWGG	4 cut(s)	157, 281, 1386, 1431
BstSCI	CCNGG	7 cut(s)	155, 245, 279, 429, 1041, 1384, 1429
BstSFI	CTRYAG	1 cut(s)	798
BstUI	CGCG	1 cut(s)	267
BstV1I	GCAGC	1 cut(s)	829
BstX2I	RGATCY	1 cut(s)	1340
BstYI	RGATCY	1 cut(s)	1340
BsuI	GTATCC	1 cut(s)	1492
BsuRI	GGCC	5 cut(s)	221, 413, 662, 1008, 1466
BtgI	CCRYGG	1 cut(s)	422
BtgZI	GCGATG	1 cut(s)	1286
BtrI	CACGTC	1 cut(s)	454
BtsCI	GGATG	2 cut(s)	1159, 1351
BtsIMutI	CAGTG	2 cut(s)	829, 1375
Cac8I	GCNNGC	4 cut(s)	29, 822, 1293, 1333
CaiI	CAGNNNCTG	2 cut(s)	91, 737
CfoI	GCGC	1 cut(s)	896
Cfr13I	GGNCC	5 cut(s)	250, 412, 427, 706, 1452
Csp6I	GTAC	3 cut(s)	502, 565, 1144
CviAII	CATG	6 cut(s)	64, 382, 817, 997, 1078, 1363
CviQI	GTAC	3 cut(s)	502, 565, 1144
DdeI	CTNAG	6 cut(s)	440, 473, 545, 1015, 1022, 1266
DpnI	GATC	5 cut(s)	71, 184, 321, 890, 1342
DpnII	GATC	5 cut(s)	69, 182, 319, 888, 1340
Eam1104I	CTCTTC	3 cut(s)	309, 671, 945
EarI	CTCTTC	3 cut(s)	309, 671, 945
EciI	GGCGGA	2 cut(s)	228, 540
Eco130I	CCWWGG	1 cut(s)	1229
Eco24I	GRGCYC	1 cut(s)	155
Eco31I	GGTCTC	1 cut(s)	270
Eco32I	GATATC	1 cut(s)	838
Eco47I	GGWCC	4 cut(s)	250, 427, 706, 1452
Eco47III	AGCGCT	1 cut(s)	895
Eco57I	CTGAAG	2 cut(s)	608, 926
EcoNI	CCTNNNNNAGG	2 cut(s)	229, 407
EcoO109I	RGGNCCY	2 cut(s)	250, 427
EcoRI	GAATTC	1 cut(s)	685
EcoRII	CCWGG	4 cut(s)	155, 279, 1384, 1429
EcoRV	GATATC	1 cut(s)	838
EcoT14I	CCWWGG	1 cut(s)	1229
EcoT38I	GRGCYC	1 cut(s)	155
ErhI	CCWWGG	1 cut(s)	1229
FaeI	CATG	6 cut(s)	67, 385, 820, 1000, 1081, 1366
FaqI	GGGAC	3 cut(s)	263, 440, 1058
FatI	CATG	6 cut(s)	63, 381, 816, 996, 1077, 1362
FauI	CCCGC	1 cut(s)	662
FbaI	TGATCA	1 cut(s)	69
Fnu4HI	GCNGC	5 cut(s)	268, 447, 573, 825, 843
FokI	GGATG	2 cut(s)	1146, 1338
FriOI	GRGCYC	1 cut(s)	155
Fsp4HI	GCNGC	5 cut(s)	268, 447, 573, 825, 843
FspBI	CTAG	3 cut(s)	696, 1230, 1332
GlaI	GCGC	1 cut(s)	895
GluI	GCNGC	5 cut(s)	268, 447, 573, 825, 843
GsaI	CCCAGC	1 cut(s)	485
GsuI	CTGGAG	2 cut(s)	139, 1368
HaeII	RGCGCY	1 cut(s)	897
HaeIII	GGCC	5 cut(s)	221, 413, 662, 1008, 1466
HapII	CCGG	5 cut(s)	79, 228, 246, 431, 1042
HhaI	GCGC	1 cut(s)	896
Hin1II	CATG	6 cut(s)	67, 385, 820, 1000, 1081, 1366
Hin6I	GCGC	1 cut(s)	894
HinP1I	GCGC	1 cut(s)	894
HincII	GTYRAC	2 cut(s)	115, 622
HindII	GTYRAC	2 cut(s)	115, 622
HindIII	AAGCTT	1 cut(s)	1439
HinfI	GANTC	6 cut(s)	82, 88, 295, 1082, 1175, 1234
HpaII	CCGG	5 cut(s)	79, 228, 246, 431, 1042
HphI	GGTGA	4 cut(s)	64, 79, 548, 610
Hpy166II	GTNNAC	3 cut(s)	115, 622, 1474
Hpy188I	TCNGA	6 cut(s)	87, 187, 630, 787, 1187, 1345
Hpy188III	TCNNGA	7 cut(s)	35, 92, 299, 323, 643, 957, 1355
Hpy8I	GTNNAC	3 cut(s)	115, 622, 1474
HpyAV	CCTTC	5 cut(s)	471, 595, 802, 1211, 1407
HpyCH4III	ACNGT	2 cut(s)	123, 1370
HpyCH4IV	ACGT	3 cut(s)	396, 453, 919
HpyCH4V	TGCA	3 cut(s)	392, 714, 1313
HpyF10VI	GCNNNNNNNGC	8 cut(s)	377, 455, 478, 872, 935, 1047, 1131, 1288
HpyF3I	CTNAG	6 cut(s)	440, 473, 545, 1015, 1022, 1266
HpySE526I	ACGT	3 cut(s)	396, 453, 919
Hsp92II	CATG	6 cut(s)	67, 385, 820, 1000, 1081, 1366
HspAI	GCGC	1 cut(s)	894
KflI	GGGWCCC	1 cut(s)	427
Ksp22I	TGATCA	1 cut(s)	69
Kzo9I	GATC	5 cut(s)	69, 182, 319, 888, 1340
LguI	GCTCTTC	2 cut(s)	671, 945
LmnI	GCTCC	7 cut(s)	158, 469, 583, 739, 860, 1139, 1195
Lsp1109I	GCAGC	1 cut(s)	829
LweI	GCATC	1 cut(s)	791
MaeI	CTAG	3 cut(s)	696, 1230, 1332
MaeII	ACGT	3 cut(s)	396, 453, 919
MaeIII	GTNAC	3 cut(s)	518, 1064, 1115
MalI	GATC	5 cut(s)	71, 184, 321, 890, 1342
MbiI	CCGCTC	1 cut(s)	768
MboI	GATC	5 cut(s)	69, 182, 319, 888, 1340
MfeI	CAATTG	1 cut(s)	387
MflI	RGATCY	1 cut(s)	1340
MhlI	GDGCHC	1 cut(s)	155
MluCI	AATT	9 cut(s)	10, 104, 170, 348, 387, 685, 746, 1425, 1489
MlyI	GAGTC	4 cut(s)	289, 1076, 1184, 1243
MmeI	TCCRAC	1 cut(s)	1161
MseI	TTAA	3 cut(s)	491, 1424, 1461
MspCI	CTTAAG	1 cut(s)	490
MspI	CCGG	5 cut(s)	79, 228, 246, 431, 1042
MspR9I	CCNGG	7 cut(s)	157, 247, 281, 431, 1043, 1386, 1431
MunI	CAATTG	1 cut(s)	387
MvaI	CCWGG	4 cut(s)	157, 281, 1386, 1431
MvnI	CGCG	1 cut(s)	267
MwoI	GCNNNNNNNGC	8 cut(s)	377, 455, 478, 872, 935, 1047, 1131, 1288
NciI	CCSGG	3 cut(s)	247, 431, 1043
NdeII	GATC	5 cut(s)	69, 182, 319, 888, 1340
NheI	GCTAGC	1 cut(s)	1331
NlaIII	CATG	6 cut(s)	67, 385, 820, 1000, 1081, 1366
NlaIV	GGNNCC	7 cut(s)	154, 251, 428, 429, 561, 1226, 1453
NmeAIII	GCCGAG	1 cut(s)	225
NmuCI	GTSAC	1 cut(s)	1064
PciSI	GCTCTTC	2 cut(s)	671, 945
PcsI	WCGNNNNNNNCGW	1 cut(s)	846
PfeI	GAWTC	2 cut(s)	82, 88
Pfl23II	CGTACG	1 cut(s)	564
PfoI	TCCNGGA	2 cut(s)	155, 1384
PkrI	GCNGC	5 cut(s)	269, 448, 574, 826, 844
PleI	GAGTC	4 cut(s)	289, 1076, 1183, 1242
PpsI	GAGTC	4 cut(s)	289, 1076, 1183, 1242
Ppu21I	YACGTR	1 cut(s)	397
PpuMI	RGGWCCY	2 cut(s)	250, 427
Psp5II	RGGWCCY	2 cut(s)	250, 427
Psp6I	CCWGG	4 cut(s)	155, 279, 1384, 1429
PspFI	CCCAGC	1 cut(s)	481
PspGI	CCWGG	4 cut(s)	155, 279, 1384, 1429
PspLI	CGTACG	1 cut(s)	564
PspN4I	GGNNCC	7 cut(s)	154, 251, 428, 429, 561, 1226, 1453
PspPI	GGNCC	5 cut(s)	250, 412, 427, 706, 1452
PspPPI	RGGWCCY	2 cut(s)	250, 427
PstNI	CAGNNNCTG	2 cut(s)	91, 737
PsuI	RGATCY	1 cut(s)	1340
RsaI	GTAC	3 cut(s)	503, 566, 1145
RsaNI	GTAC	3 cut(s)	502, 565, 1144
SapI	GCTCTTC	2 cut(s)	671, 945
SaqAI	TTAA	3 cut(s)	491, 1424, 1461
SatI	GCNGC	5 cut(s)	268, 447, 573, 825, 843
Sau3AI	GATC	5 cut(s)	69, 182, 319, 888, 1340
Sau96I	GGNCC	5 cut(s)	250, 412, 427, 706, 1452
ScaI	AGTACT	1 cut(s)	1145
SchI	GAGTC	4 cut(s)	289, 1076, 1184, 1243
ScrFI	CCNGG	7 cut(s)	157, 247, 281, 431, 1043, 1386, 1431
SduI	GDGCHC	1 cut(s)	155
SfaNI	GCATC	1 cut(s)	791
SfcI	CTRYAG	1 cut(s)	798
SinI	GGWCC	4 cut(s)	250, 427, 706, 1452
SmlI	CTYRAG	5 cut(s)	490, 505, 641, 1376, 1404
SmoI	CTYRAG	5 cut(s)	490, 505, 641, 1376, 1404
Sse9I	AATT	9 cut(s)	10, 104, 170, 348, 387, 685, 746, 1425, 1489
SspI	AATATT	1 cut(s)	1061
SspMI	CTAG	3 cut(s)	696, 1230, 1332
StyD4I	CCNGG	7 cut(s)	155, 245, 279, 429, 1041, 1384, 1429
StyI	CCWWGG	1 cut(s)	1229
TaaI	ACNGT	2 cut(s)	123, 1370
TaiI	ACGT	3 cut(s)	399, 456, 922
TaqI	TCGA	3 cut(s)	579, 753, 978
TasI	AATT	9 cut(s)	10, 104, 170, 348, 387, 685, 746, 1425, 1489
TatI	WGTACW	1 cut(s)	1143
TauI	GCSGC	4 cut(s)	270, 449, 575, 827
TfiI	GAWTC	2 cut(s)	82, 88
Tru1I	TTAA	3 cut(s)	491, 1424, 1461
Tru9I	TTAA	3 cut(s)	491, 1424, 1461
TscAI	CASTG	2 cut(s)	836, 1375
TseFI	GTSAC	1 cut(s)	1064
TseI	GCWGC	1 cut(s)	842
Tsp45I	GTSAC	1 cut(s)	1064
TspDTI	ATGAA	4 cut(s)	318, 324, 1148, 1340
TspRI	CASTG	2 cut(s)	836, 1375
Vha464I	CTTAAG	1 cut(s)	490
VpaK11BI	GGWCC	4 cut(s)	250, 427, 706, 1452
XagI	CCTNNNNNAGG	2 cut(s)	229, 407
XapI	RAATTY	1 cut(s)	685
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1144
XmaJI	CCTAGG	1 cut(s)	1229
XspI	CTAG	3 cut(s)	696, 1230, 1332
ZrmI	AGTACT	1 cut(s)	1145

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.