Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000435.1

Orthogroup ID

OG0002215

Physical Location & Seq

Genomic Coordinates Forward (+)

103021 .. 108019

Gene Structure 4999 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000435.1_g000025.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1965 bp

atgacacatgataacaccggatttggatcactcagggagaagaagaagaacatggtgatcacccaccggaatcagaatctggaaaaagtgaaattagaagttgacccacagttgctctacttccatgtaaaaccaatgggctccaggaagcaaacagaattgtctctacgatcagaaatggtcaagccgaggacaaaaggcggaatggcctcctccggcaggaacagaagttccggggaccttgcctattatcgcggcacgagagaccaggaagcatacaagactcacgatgaagatgaagaagaggaggaggagatgggaatggagttcgtaattatgacagaagtgttcaacgccgtttcagccatgacaattgcatacgtgagcctacaagaggcccacaacccgtgggacccggagaagctgagggcggctgacgtggcggtggtgggggagctgagaaggctgggagacttaagagagaggtacttgaggagaagatgttacggcggaggtagtggtgatatgctgagggaggcggtggtgccgtacgaggcggcaatcgaggagctgaagaaagaggtgaagggtagagatatggaggttgacaatctgaaagagaagctcaagagcattattggagaggccaatagcgggaagaagagcaggaattctatgtctaggagaaaggtccattgcattactcaagtttcaacagctcctgccccagaattgttcgagggggcaatgagcggagttagagaggcatcagacaccttcactatagttctcctctctctcatgcgtgcggctcactgggatatcgctgcggtcgttcgctccattgaagccactactgccacagctacgaggatcagcgcttcctctgtaatccaaactcaacgtgccaacgccaagttcgctcttcagtcctacatttcccgaaaagtctttcaaggcttcgaccacgagagcttctacatggataacggcctctcctcagttctcagcccagaccagtatcgccgggactgcttcgccgaatattgtgacatcaaaaacatggactccacagagcttctcaatatccagccctcgtgtaactttggcaagttttgctccaacaagtacttggctattgttcatcccaagatggaggagtcattcttcggtgacttggagcagagacaacaagttgtagaaggcaggaaccctaggagtcagttttacaggcagttcttggagttggctaaggcgatgtggttgcttcacttgctggcgttctcgcttgaccctgcaccaagtcagtttgaggctagcagaggatctgattttcatccagactacatggacagtgttctcaagtctccaggacaagttccttcggctcaagttgttgggtttcccttaattccagggttcaagcttggcaatgggactacaaaaagaccagtcccattggagcactgcctattttactccggaaaactttacaagatatgtgaaagtgaaagcttcattcctcagggcttcaaagctgcaaaagatacattcaagaaaaagaatagtcctgccactggcggattctttgcaaggacaatccttgtggaggaccgaaagagtgactggttcttatcgtttgattacatttcaggtttcggtcttgggttagggaattcggaaggtgacccgaatttcctaacaagtggtatcaagagcaaggtttcaagagctagaggaaagatggggattgaagacgtcgagacaaaagttgataaatttgatgggcatgattttgttatgtggaggtctcaaataactaactatttgaatctgaagaaattgtccaagcttggcactcaagctttaggagctgaaaaaggtggattaggaggagctcgacactcaagctttaggagctattcgactatcgctatcaaacgaagttcgacgcgatgtgattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0008150 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009639 GO:0009959 GO:0050896

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF641

Protein Analysis

654

Amino Acids

73.45

Weight (kDa)

8.9

Isoelectric Point (pI)

45.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002215)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58960 AT5G58960 AT5G58960
fragaria_vesca	FvH4_3g37820 FvH4_3g37850
malus_domestica	MD03G1078100.v1.1 MD11G1082800.v1.1
prunus_persica	Prupe.6G063100_v2.0.a1
pyrus_communis	pycom03g06240 pycom11g07090
rosa_chinensis	RchiOBHm_Chr5g0068001 RchiOBHm_Chr5g0068051 RchiOBHm_Chr5g0068071
rosa_laevigata	RLG00000035951 RLG00000035952
rosa_multiflora	Rmu_co8216896.1_g000001 Rmu_co8424771.1_g000001 Rmu_sc0000435.1_g000019 Rmu_sc0000435.1_g000025 Rmu_sc0000435.1_g000034
rosa_roxburghii	Rroxscaffold_1G00012550 Rroxscaffold_1G00012560 Rroxscaffold_1G00013280 Rroxscaffold_1G00013290
rosa_rugosa	Rorug05G0387200 Rorug05G0387600 Rorug05G0388100
rosa_samantha	Rh5AG446100 Rh5AG446300 Rh5AG446400 Rh5BG463600 Rh5BG464000 Rh5BG464300 Rh5CG485500 Rh5CG486000 Rh5CG486300 Rh5DG477600 Rh5DG478000 Rh5DG478300
rosa_wichuraiana	Rw5G041670 Rw5G041680 Rw5G041710 Rw5G041720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1761
AccB1I	GGYRCC	1 cut(s)	544
AccBSI	CCGCTC	1 cut(s)	753
AccII	CGCG	2 cut(s)	255, 1954
AccIII	TCCGGA	1 cut(s)	1481
AclWI	GGATC	3 cut(s)	34, 881, 1333
AcsI	RAATTY	4 cut(s)	670, 1675, 1693, 1778
AcuI	CTGAAG	3 cut(s)	593, 911, 1856
AcyI	GRCGYC	1 cut(s)	1758
AfaI	GTAC	3 cut(s)	488, 551, 1130
AfeI	AGCGCT	1 cut(s)	880
AfiI	CCNNNNNNNGG	5 cut(s)	219, 394, 654, 1577, 1609
AflII	CTTAAG	1 cut(s)	475
AjiI	CACGTC	1 cut(s)	439
AjnI	CCWGG	4 cut(s)	143, 267, 1369, 1414
AjuI	GAANNNNNNNTTGG	2 cut(s)	902, 934
AloI	GAACNNNNNNTCC	4 cut(s)	214, 215, 246, 247
Alw21I	GWGCWC	2 cut(s)	1467, 1900
Alw26I	GTCTC	7 cut(s)	168, 258, 465, 1180, 1371, 1757, 1815
AlwI	GGATC	3 cut(s)	34, 881, 1333
AlwNI	CAGNNNCTG	2 cut(s)	79, 722
Aor13HI	TCCGGA	1 cut(s)	1481
Aor51HI	AGCGCT	1 cut(s)	880
AoxI	GGCC	4 cut(s)	207, 396, 645, 991
ApeKI	GCWGC	2 cut(s)	827, 1538
ApoI	RAATTY	4 cut(s)	670, 1675, 1693, 1778
AspA2I	CCTAGG	1 cut(s)	1214
AspLEI	GCGC	1 cut(s)	881
AspS9I	GGNCC	5 cut(s)	238, 397, 412, 691, 1612
AsuC2I	CCSGG	3 cut(s)	235, 416, 1028
AsuHPI	GGTGA	6 cut(s)	52, 67, 533, 595, 1184, 1697
AsuNHI	GCTAGC	1 cut(s)	1316
AvaII	GGWCC	4 cut(s)	238, 412, 691, 1612
AvrII	CCTAGG	1 cut(s)	1214
AxyI	CCTNAGG	1 cut(s)	1524
BanI	GGYRCC	1 cut(s)	544
BanII	GRGCYC	2 cut(s)	143, 1900
BauI	CACGAG	3 cut(s)	259, 968, 1096
BbsI	GAAGAC	1 cut(s)	1761
Bbv12I	GWGCWC	2 cut(s)	1467, 1900
BbvCI	CCTCAGC	2 cut(s)	425, 530
BbvI	GCAGC	2 cut(s)	814, 1525
BccI	CCATC	4 cut(s)	310, 1147, 1738, 1778
BceAI	ACGGC	4 cut(s)	341, 523, 532, 1006
BcgI	CGANNNNNNTGC	2 cut(s)	1246, 1280
BciT130I	CCWGG	4 cut(s)	145, 269, 1371, 1416
BclI	TGATCA	1 cut(s)	57
BcnI	CCSGG	3 cut(s)	235, 416, 1028
BcoDI	GTCTC	7 cut(s)	168, 258, 465, 1180, 1371, 1757, 1815
BfaI	CTAG	4 cut(s)	681, 1215, 1317, 1734
BfmI	CTRYAG	1 cut(s)	783
BfoI	RGCGCY	1 cut(s)	882
BfrI	CTTAAG	1 cut(s)	475
BisI	GCNGC	6 cut(s)	256, 432, 558, 810, 828, 1539
BlnI	CCTAGG	1 cut(s)	1214
BlsI	GCNGC	6 cut(s)	257, 433, 559, 811, 829, 1540
BmcAI	AGTACT	1 cut(s)	1130
Bme1390I	CCNGG	7 cut(s)	145, 235, 269, 416, 1028, 1371, 1416
Bme18I	GGWCC	4 cut(s)	238, 412, 691, 1612
BmgBI	CACGTC	1 cut(s)	439
BmgT120I	GGNCC	5 cut(s)	238, 397, 412, 691, 1612
BmiI	GGNNCC	6 cut(s)	142, 239, 413, 414, 546, 1211
BmrFI	CCNGG	7 cut(s)	145, 235, 269, 416, 1028, 1371, 1416
BmrI	ACTGGG	1 cut(s)	826
BmsI	GCATC	1 cut(s)	776
BmtI	GCTAGC	1 cut(s)	1320
BmuI	ACTGGG	1 cut(s)	826
BpiI	GAAGAC	1 cut(s)	1761
BpmI	CTGGAG	2 cut(s)	127, 1353
Bpu10I	CCTNAGC	3 cut(s)	425, 530, 1251
BpuEI	CTTGAG	7 cut(s)	511, 611, 690, 1346, 1374, 1845, 1891
BpuMI	CCSGG	3 cut(s)	235, 416, 1028
BsaAI	YACGTR	1 cut(s)	382
BsaBI	GATNNNNATC	2 cut(s)	25, 1335
BsaHI	GRCGYC	1 cut(s)	1758
BsaI	GGTCTC	2 cut(s)	258, 1815
BsaJI	CCNNGG	5 cut(s)	188, 234, 407, 1214, 1415
BsaWI	WCCGGW	3 cut(s)	17, 66, 1481
BsaXI	ACNNNNNCTCC	6 cut(s)	487, 517, 980, 1010, 1052, 1082
Bsc4I	CCNNNNNNNGG	5 cut(s)	219, 394, 654, 1577, 1609
Bse1I	ACTGG	5 cut(s)	821, 1018, 1451, 1582, 1631
Bse21I	CCTNAGG	1 cut(s)	1524
Bse3DI	GCAATG	3 cut(s)	694, 753, 1438
Bse8I	GATNNNNATC	2 cut(s)	25, 1335
BseAI	TCCGGA	1 cut(s)	1481
BseBI	CCWGG	4 cut(s)	145, 269, 1371, 1416
BseDI	CCNNGG	5 cut(s)	188, 234, 407, 1214, 1415
BseGI	GGATG	2 cut(s)	1144, 1336
BseJI	GATNNNNATC	2 cut(s)	25, 1335
BseLI	CCNNNNNNNGG	5 cut(s)	219, 394, 654, 1577, 1609
BseMI	GCAATG	3 cut(s)	694, 753, 1438
BseMII	CTCAG	7 cut(s)	46, 416, 449, 521, 1014, 1021, 1538
BseNI	ACTGG	5 cut(s)	821, 1018, 1451, 1582, 1631
BseXI	GCAGC	2 cut(s)	814, 1525
BseYI	CCCAGC	1 cut(s)	466
BsgI	GTGCAG	1 cut(s)	1281
Bsh1236I	CGCG	2 cut(s)	255, 1954
Bsh1285I	CGRYCG	1 cut(s)	834
BshFI	GGCC	4 cut(s)	209, 398, 647, 993
BshNI	GGYRCC	1 cut(s)	544
BsiEI	CGRYCG	1 cut(s)	834
BsiHKAI	GWGCWC	2 cut(s)	1467, 1900
BsiSI	CCGG	7 cut(s)	18, 67, 216, 234, 416, 1027, 1482
BsiWI	CGTACG	1 cut(s)	549
BslFI	GGGAC	5 cut(s)	251, 425, 1043, 1439, 1450
BslI	CCNNNNNNNGG	5 cut(s)	219, 394, 654, 1577, 1609
BsmAI	GTCTC	7 cut(s)	168, 258, 465, 1180, 1371, 1757, 1815
BsmFI	GGGAC	5 cut(s)	251, 425, 1043, 1439, 1450
BsnI	GGCC	4 cut(s)	209, 398, 647, 993
Bso31I	GGTCTC	2 cut(s)	258, 1815
Bsp1286I	GDGCHC	3 cut(s)	143, 1467, 1900
Bsp13I	TCCGGA	1 cut(s)	1481
Bsp143I	GATC	5 cut(s)	26, 57, 170, 873, 1325
BspANI	GGCC	4 cut(s)	209, 398, 647, 993
BspCNI	CTCAG	7 cut(s)	45, 417, 450, 522, 1013, 1020, 1537
BspEI	TCCGGA	1 cut(s)	1481
BspFNI	CGCG	2 cut(s)	255, 1954
BspLI	GGNNCC	6 cut(s)	142, 239, 413, 414, 546, 1211
BspOI	GCTAGC	1 cut(s)	1320
BspPI	GGATC	3 cut(s)	34, 881, 1333
BspQI	GCTCTTC	2 cut(s)	656, 930
BspT107I	GGYRCC	1 cut(s)	544
BspTI	CTTAAG	1 cut(s)	475
BspTNI	GGTCTC	2 cut(s)	258, 1815
BsrBI	CCGCTC	1 cut(s)	753
BsrDI	GCAATG	3 cut(s)	694, 753, 1438
BsrI	ACTGG	5 cut(s)	821, 1018, 1451, 1582, 1631
BssECI	CCNNGG	5 cut(s)	188, 234, 407, 1214, 1415
BssMI	GATC	5 cut(s)	26, 57, 170, 873, 1325
BssNI	GRCGYC	1 cut(s)	1758
BssSI	CACGAG	3 cut(s)	259, 968, 1096
BssT1I	CCWWGG	1 cut(s)	1214
Bst2BI	CACGAG	3 cut(s)	259, 968, 1096
Bst2UI	CCWGG	4 cut(s)	145, 269, 1371, 1416
Bst4CI	ACNGT	2 cut(s)	111, 1355
Bst6I	CTCTTC	3 cut(s)	297, 656, 930
BstACI	GRCGYC	1 cut(s)	1758
BstAFI	CTTAAG	1 cut(s)	475
BstAPI	GCANNNNNTGC	1 cut(s)	1116
BstBAI	YACGTR	1 cut(s)	382
BstC8I	GCNNGC	3 cut(s)	807, 1278, 1318
BstDEI	CTNAG	8 cut(s)	32, 425, 458, 530, 1000, 1007, 1251, 1524
BstDSI	CCRYGG	1 cut(s)	407
BstEII	GGTNACC	1 cut(s)	1685
BstENI	CCTNNNNNAGG	3 cut(s)	217, 392, 1607
BstF5I	GGATG	2 cut(s)	1144, 1336
BstFNI	CGCG	2 cut(s)	255, 1954
BstH2I	RGCGCY	1 cut(s)	882
BstHHI	GCGC	1 cut(s)	881
BstKTI	GATC	5 cut(s)	29, 60, 173, 876, 1328
BstMAI	GTCTC	7 cut(s)	168, 258, 465, 1180, 1371, 1757, 1815
BstMBI	GATC	5 cut(s)	26, 57, 170, 873, 1325
BstMCI	CGRYCG	1 cut(s)	834
BstNI	CCWGG	4 cut(s)	145, 269, 1371, 1416
BstPI	GGTNACC	1 cut(s)	1685
BstSCI	CCNGG	7 cut(s)	143, 233, 267, 414, 1026, 1369, 1414
BstSFI	CTRYAG	1 cut(s)	783
BstUI	CGCG	2 cut(s)	255, 1954
BstV1I	GCAGC	2 cut(s)	814, 1525
BstV2I	GAAGAC	1 cut(s)	1761
BstX2I	RGATCY	1 cut(s)	1325
BstYI	RGATCY	1 cut(s)	1325
Bsu36I	CCTNAGG	1 cut(s)	1524
BsuRI	GGCC	4 cut(s)	209, 398, 647, 993
BtgI	CCRYGG	1 cut(s)	407
BtgZI	GCGATG	1 cut(s)	1271
BtrI	CACGTC	1 cut(s)	439
BtsCI	GGATG	2 cut(s)	1144, 1336
BtsI	GCAGTG	1 cut(s)	1465
BtsIMutI	CAGTG	4 cut(s)	814, 1360, 1465, 1575
Cac8I	GCNNGC	3 cut(s)	807, 1278, 1318
CaiI	CAGNNNCTG	2 cut(s)	79, 722
CfoI	GCGC	1 cut(s)	881
Cfr13I	GGNCC	5 cut(s)	238, 397, 412, 691, 1612
CseI	GACGC	1 cut(s)	1960
Csp6I	GTAC	3 cut(s)	487, 550, 1129
CspCI	CAANNNNNGTGG	2 cut(s)	1587, 1622
CviAII	CATG	9 cut(s)	8, 52, 125, 367, 802, 982, 1063, 1348, 1790
CviQI	GTAC	3 cut(s)	487, 550, 1129
DdeI	CTNAG	8 cut(s)	32, 425, 458, 530, 1000, 1007, 1251, 1524
DpnI	GATC	5 cut(s)	28, 59, 172, 875, 1327
DpnII	GATC	5 cut(s)	26, 57, 170, 873, 1325
Eam1104I	CTCTTC	3 cut(s)	297, 656, 930
EarI	CTCTTC	3 cut(s)	297, 656, 930
EciI	GGCGGA	3 cut(s)	216, 525, 1596
Ecl136II	GAGCTC	1 cut(s)	1898
Eco130I	CCWWGG	1 cut(s)	1214
Eco24I	GRGCYC	2 cut(s)	143, 1900
Eco31I	GGTCTC	2 cut(s)	258, 1815
Eco32I	GATATC	1 cut(s)	823
Eco47I	GGWCC	4 cut(s)	238, 412, 691, 1612
Eco47III	AGCGCT	1 cut(s)	880
Eco53kI	GAGCTC	1 cut(s)	1898
Eco57I	CTGAAG	3 cut(s)	593, 911, 1856
Eco81I	CCTNAGG	1 cut(s)	1524
Eco91I	GGTNACC	1 cut(s)	1685
EcoICRI	GAGCTC	1 cut(s)	1898
EcoNI	CCTNNNNNAGG	3 cut(s)	217, 392, 1607
EcoO109I	RGGNCCY	2 cut(s)	238, 412
EcoO65I	GGTNACC	1 cut(s)	1685
EcoRI	GAATTC	2 cut(s)	670, 1675
EcoRII	CCWGG	4 cut(s)	143, 267, 1369, 1414
EcoRV	GATATC	1 cut(s)	823
EcoT14I	CCWWGG	1 cut(s)	1214
EcoT38I	GRGCYC	2 cut(s)	143, 1900
ErhI	CCWWGG	1 cut(s)	1214
FaeI	CATG	9 cut(s)	11, 55, 128, 370, 805, 985, 1066, 1351, 1793
FaqI	GGGAC	5 cut(s)	251, 425, 1043, 1439, 1450
FatI	CATG	9 cut(s)	7, 51, 124, 366, 801, 981, 1062, 1347, 1789
FauI	CCCGC	1 cut(s)	647
FbaI	TGATCA	1 cut(s)	57
Fnu4HI	GCNGC	6 cut(s)	256, 432, 558, 810, 828, 1539
FokI	GGATG	2 cut(s)	1131, 1323
FriOI	GRGCYC	2 cut(s)	143, 1900
Fsp4HI	GCNGC	6 cut(s)	256, 432, 558, 810, 828, 1539
FspBI	CTAG	4 cut(s)	681, 1215, 1317, 1734
GlaI	GCGC	1 cut(s)	880
GluI	GCNGC	6 cut(s)	256, 432, 558, 810, 828, 1539
GsaI	CCCAGC	1 cut(s)	470
GsuI	CTGGAG	2 cut(s)	127, 1353
HaeII	RGCGCY	1 cut(s)	882
HaeIII	GGCC	4 cut(s)	209, 398, 647, 993
HapII	CCGG	7 cut(s)	18, 67, 216, 234, 416, 1027, 1482
HgaI	GACGC	1 cut(s)	1960
HhaI	GCGC	1 cut(s)	881
Hin1I	GRCGYC	1 cut(s)	1758
Hin1II	CATG	9 cut(s)	11, 55, 128, 370, 805, 985, 1066, 1351, 1793
Hin6I	GCGC	1 cut(s)	879
HinP1I	GCGC	1 cut(s)	879
HincII	GTYRAC	2 cut(s)	103, 607
HindII	GTYRAC	2 cut(s)	103, 607
HindIII	AAGCTT	5 cut(s)	1424, 1513, 1850, 1863, 1909
HinfI	GANTC	8 cut(s)	70, 76, 283, 1067, 1160, 1219, 1584, 1831
HpaII	CCGG	7 cut(s)	18, 67, 216, 234, 416, 1027, 1482
HphI	GGTGA	6 cut(s)	52, 67, 533, 595, 1184, 1697
Hpy166II	GTNNAC	2 cut(s)	103, 607
Hpy188I	TCNGA	7 cut(s)	75, 175, 615, 772, 1330, 1681, 1836
Hpy8I	GTNNAC	2 cut(s)	103, 607
Hpy99I	CGWCG	2 cut(s)	1763, 1954
HpyAV	CCTTC	6 cut(s)	456, 580, 787, 1196, 1392, 1676
HpyCH4III	ACNGT	2 cut(s)	111, 1355
HpyCH4IV	ACGT	4 cut(s)	381, 438, 904, 1758
HpyCH4V	TGCA	5 cut(s)	377, 699, 1298, 1541, 1592
HpyF3I	CTNAG	8 cut(s)	32, 425, 458, 530, 1000, 1007, 1251, 1524
HpySE526I	ACGT	4 cut(s)	381, 438, 904, 1758
Hsp92I	GRCGYC	1 cut(s)	1758
Hsp92II	CATG	9 cut(s)	11, 55, 128, 370, 805, 985, 1066, 1351, 1793
HspAI	GCGC	1 cut(s)	879
KflI	GGGWCCC	1 cut(s)	412
Kpn2I	TCCGGA	1 cut(s)	1481
Ksp22I	TGATCA	1 cut(s)	57
Kzo9I	GATC	5 cut(s)	26, 57, 170, 873, 1325
LguI	GCTCTTC	2 cut(s)	656, 930
Lsp1109I	GCAGC	2 cut(s)	814, 1525
LweI	GCATC	1 cut(s)	776
MaeI	CTAG	4 cut(s)	681, 1215, 1317, 1734
MaeII	ACGT	4 cut(s)	381, 438, 904, 1758
MaeIII	GTNAC	6 cut(s)	503, 1049, 1100, 1172, 1622, 1685
MalI	GATC	5 cut(s)	28, 59, 172, 875, 1327
MbiI	CCGCTC	1 cut(s)	753
MboI	GATC	5 cut(s)	26, 57, 170, 873, 1325
MfeI	CAATTG	1 cut(s)	372
MflI	RGATCY	1 cut(s)	1325
MhlI	GDGCHC	3 cut(s)	143, 1467, 1900
MlyI	GAGTC	4 cut(s)	277, 1061, 1169, 1228
MmeI	TCCRAC	1 cut(s)	1146
MroI	TCCGGA	1 cut(s)	1481
MseI	TTAA	3 cut(s)	476, 1409, 1963
MspCI	CTTAAG	1 cut(s)	475
MspI	CCGG	7 cut(s)	18, 67, 216, 234, 416, 1027, 1482
MspR9I	CCNGG	7 cut(s)	145, 235, 269, 416, 1028, 1371, 1416
MunI	CAATTG	1 cut(s)	372
MvaI	CCWGG	4 cut(s)	145, 269, 1371, 1416
MvnI	CGCG	2 cut(s)	255, 1954
NciI	CCSGG	3 cut(s)	235, 416, 1028
NdeII	GATC	5 cut(s)	26, 57, 170, 873, 1325
NheI	GCTAGC	1 cut(s)	1316
NlaIII	CATG	9 cut(s)	11, 55, 128, 370, 805, 985, 1066, 1351, 1793
NlaIV	GGNNCC	6 cut(s)	142, 239, 413, 414, 546, 1211
NmeAIII	GCCGAG	1 cut(s)	213
NmuCI	GTSAC	4 cut(s)	1049, 1172, 1622, 1685
PciSI	GCTCTTC	2 cut(s)	656, 930
PcsI	WCGNNNNNNNCGW	1 cut(s)	831
PfeI	GAWTC	4 cut(s)	70, 76, 1584, 1831
Pfl23II	CGTACG	1 cut(s)	549
PfoI	TCCNGGA	2 cut(s)	143, 1369
PkrI	GCNGC	6 cut(s)	257, 433, 559, 811, 829, 1540
PleI	GAGTC	4 cut(s)	277, 1061, 1168, 1227
PpsI	GAGTC	4 cut(s)	277, 1061, 1168, 1227
Ppu21I	YACGTR	1 cut(s)	382
PpuMI	RGGWCCY	2 cut(s)	238, 412
Psp124BI	GAGCTC	1 cut(s)	1900
Psp5II	RGGWCCY	2 cut(s)	238, 412
Psp6I	CCWGG	4 cut(s)	143, 267, 1369, 1414
PspEI	GGTNACC	1 cut(s)	1685
PspFI	CCCAGC	1 cut(s)	466
PspGI	CCWGG	4 cut(s)	143, 267, 1369, 1414
PspLI	CGTACG	1 cut(s)	549
PspN4I	GGNNCC	6 cut(s)	142, 239, 413, 414, 546, 1211
PspPI	GGNCC	5 cut(s)	238, 397, 412, 691, 1612
PspPPI	RGGWCCY	2 cut(s)	238, 412
PstNI	CAGNNNCTG	2 cut(s)	79, 722
PsuI	RGATCY	1 cut(s)	1325
RsaI	GTAC	3 cut(s)	488, 551, 1130
RsaNI	GTAC	3 cut(s)	487, 550, 1129
SacI	GAGCTC	1 cut(s)	1900
SapI	GCTCTTC	2 cut(s)	656, 930
SaqAI	TTAA	3 cut(s)	476, 1409, 1963
SatI	GCNGC	6 cut(s)	256, 432, 558, 810, 828, 1539
Sau3AI	GATC	5 cut(s)	26, 57, 170, 873, 1325
Sau96I	GGNCC	5 cut(s)	238, 397, 412, 691, 1612
ScaI	AGTACT	1 cut(s)	1130
SchI	GAGTC	4 cut(s)	277, 1061, 1169, 1228
ScrFI	CCNGG	7 cut(s)	145, 235, 269, 416, 1028, 1371, 1416
SduI	GDGCHC	3 cut(s)	143, 1467, 1900
SfaNI	GCATC	1 cut(s)	776
SfcI	CTRYAG	1 cut(s)	783
SinI	GGWCC	4 cut(s)	238, 412, 691, 1612
SmlI	CTYRAG	8 cut(s)	475, 490, 626, 705, 1361, 1389, 1860, 1906
SmoI	CTYRAG	8 cut(s)	475, 490, 626, 705, 1361, 1389, 1860, 1906
SspI	AATATT	1 cut(s)	1046
SspMI	CTAG	4 cut(s)	681, 1215, 1317, 1734
SstI	GAGCTC	1 cut(s)	1900
StyD4I	CCNGG	7 cut(s)	143, 233, 267, 414, 1026, 1369, 1414
StyI	CCWWGG	1 cut(s)	1214
TaaI	ACNGT	2 cut(s)	111, 1355
TaiI	ACGT	4 cut(s)	384, 441, 907, 1761
TaqI	TCGA	7 cut(s)	564, 738, 963, 1761, 1900, 1925, 1949
TaqII	GACCGA	2 cut(s)	1629, 1649
TatI	WGTACW	1 cut(s)	1128
TauI	GCSGC	4 cut(s)	258, 434, 560, 812
TfiI	GAWTC	4 cut(s)	70, 76, 1584, 1831
Tru1I	TTAA	3 cut(s)	476, 1409, 1963
Tru9I	TTAA	3 cut(s)	476, 1409, 1963
TscAI	CASTG	4 cut(s)	821, 1360, 1472, 1582
TseFI	GTSAC	4 cut(s)	1049, 1172, 1622, 1685
TseI	GCWGC	2 cut(s)	827, 1538
Tsp45I	GTSAC	4 cut(s)	1049, 1172, 1622, 1685
TspDTI	ATGAA	5 cut(s)	306, 312, 1133, 1325, 1507
TspRI	CASTG	4 cut(s)	821, 1360, 1472, 1582
Vha464I	CTTAAG	1 cut(s)	475
VpaK11BI	GGWCC	4 cut(s)	238, 412, 691, 1612
XagI	CCTNNNNNAGG	3 cut(s)	217, 392, 1607
XapI	RAATTY	4 cut(s)	670, 1675, 1693, 1778
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1129
XmaJI	CCTAGG	1 cut(s)	1214
XspI	CTAG	4 cut(s)	681, 1215, 1317, 1734
ZraI	GACGTC	1 cut(s)	1759
ZrmI	AGTACT	1 cut(s)	1130

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.