Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0002215

Physical Location & Seq

Genomic Coordinates Reverse (-)

76635402 .. 76637160

Gene Structure 1759 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG446100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1503 bp

ATGGTGATCACCCACCGGGATCAGAACCTGGAAAAAGTGAAATTAGAAGTTGACCCACAGTTGCTCTACTTCCATGTAAAGCCAATAGGCTCCGGGAAGCAAACAGAATTGTCTCTGCGATCAGAAATGGTCAAGCCGAGGACAAAAGGAGGAATGGCGGGAAGGTTTTGGAATTTCTCCGATCTAATTCAGCAAGTGTCAGCTGCTTGCAACCTCCGCCCACCCGCCTCCTCCGGCAGGAACAGAAGTTCCGGTGACCTAGCTGATTATTGCGGCACGAGAGACCAGGAAGCATACAAGACTCACGATGAAGATGAAGATGAAGAAGAGGAGGAGGTGATGGGAATGGAGTTCGTAGTTATGACAGAAGTATTCAACGCCGTTTCAGCCATGACAATTGCATACGTGAGCCTACAAGAAGCCCACAACCCATGGGACCCGGAGAAGCTGAGGGCGGCTGACGTGGCGGTGGTGGGGGAGCTGAGAAGGCTGGGAGAGTTAAGAGAGAGGTACTTGAGGAGAAGATGTTACGGCGGAGGTAGTGGTGATATGCTGAGGGAGGCGGTAGTGCCGTACGAGGCGGCAATCGATGAGCTGAAGAGAGAGGTGAAGGCTAGAGACATGGAGGTTGACAATCTCAAAGAGAAGCTCAAGAGCATTATTGGAGAGACCAATAGCGGGAAAAAGAGCTGGACGTCTCTGTCTAGGAGAAAGGTCAATTGCATTACTCAAGTTCCAGCAGCTCCTGCACCAGAATTGTTCGAGGGGGCAATGAGCGGAGTTAGAGACGCATTAGACACCTTCACTATAGTTCTCCTCTCTCTCATGCGTGCGGCTCACTGGGATATTGCTGCGGCCGTACGCTCCATTGAAGCCGCCACTGCCACAGCTACGAGGATCAGCGCTTCCTCTGTAATCCAAACTCAACGTGCCAACGCCAAGTTCGCTCTTCAGTCCTACATTTCCCGTAAAGTCTTTCAAGGCTTCGACCACGAGAGCTTCTACATGGATAACGGCCTCTCCTCAGTTCTCAGCCCAGACCAGTATCACCGGGACTGCTTCGCCGAATATTGTGACATGAAAAGCATGGACTCCGCAGAGCTTCTCAATATTCAGCCCTCGTGTAACTTTGGGAAGTTTTGCTCCAACAAGTACTTGGCTATTGTTCATCCCAAGATGGAGGAGTCATTCTTCGGAGACTTGGAGCAGAGACAACAAGTTGTAGAAGGCAGGCATCCTAGGAGTCAGTTTTACAGGCAGTTCTTGGAGTTGGCTAAGGCGATGTGGTTGCTTCACTTGCTGGCGTTCTCGCTTGACCCTGCACCAAGTCAGTTTGAGGCTGGCAGAGGAGCTGATTTTCATCCAGACTACATGGAGAGTGTTCTCAAGTCTCCAGGACAAGTTCCTTCGGGTCAAGTTGTTGGGTTTCCCTTAATTCCAGGGTTCAAGCTTGGCAATGGGTCGATTATTAAGGCCAGAGTTTACCTTGTATCCAAGAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0008150 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009639 GO:0009959 GO:0050896

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF641

Protein Analysis

500

Amino Acids

56.04

Weight (kDa)

6.07

Isoelectric Point (pI)

44.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF641	PF04859	119 - 228	2.2e-30	Plant protein of unknown function (DUF641)
GIL1_IRKI_C	PF24994	445 - 495	2.4e-08	GIL1/IRKI C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002215)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58960 AT5G58960 AT5G58960
fragaria_vesca	FvH4_3g37820 FvH4_3g37850
malus_domestica	MD03G1078100.v1.1 MD11G1082800.v1.1
prunus_persica	Prupe.6G063100_v2.0.a1
pyrus_communis	pycom03g06240 pycom11g07090
rosa_chinensis	RchiOBHm_Chr5g0068001 RchiOBHm_Chr5g0068051 RchiOBHm_Chr5g0068071
rosa_laevigata	RLG00000035951 RLG00000035952
rosa_multiflora	Rmu_co8216896.1_g000001 Rmu_co8424771.1_g000001 Rmu_sc0000435.1_g000019 Rmu_sc0000435.1_g000025 Rmu_sc0000435.1_g000034
rosa_roxburghii	Rroxscaffold_1G00012550 Rroxscaffold_1G00012560 Rroxscaffold_1G00013280 Rroxscaffold_1G00013290
rosa_rugosa	Rorug05G0387200 Rorug05G0387600 Rorug05G0388100
rosa_samantha	Rh5AG446100 Rh5AG446300 Rh5AG446400 Rh5BG463600 Rh5BG464000 Rh5BG464300 Rh5CG485500 Rh5CG486000 Rh5CG486300 Rh5DG477600 Rh5DG478000 Rh5DG478300
rosa_wichuraiana	Rw5G041670 Rw5G041680 Rw5G041710 Rw5G041720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	700
AatII	GACGTC	1 cut(s)	698
AccBSI	CCGCTC	1 cut(s)	777
AclWI	GGATC	2 cut(s)	27, 905
AcoI	YGGCCR	1 cut(s)	855
AcsI	RAATTY	1 cut(s)	172
AcuI	CTGAAG	2 cut(s)	617, 935
AcyI	GRCGYC	1 cut(s)	695
AfaI	GTAC	4 cut(s)	512, 575, 861, 1154
AfeI	AGCGCT	1 cut(s)	904
AfiI	CCNNNNNNNGG	2 cut(s)	237, 678
AgsI	TTSAA	4 cut(s)	376, 872, 980, 1447
AjiI	CACGTC	1 cut(s)	463
AjnI	CCWGG	4 cut(s)	27, 285, 1393, 1438
AjuI	GAANNNNNNNTTGG	2 cut(s)	926, 958
AloI	GAACNNNNNNTCC	4 cut(s)	232, 233, 264, 265
Alw26I	GTCTC	9 cut(s)	117, 276, 612, 662, 702, 780, 1191, 1204, 1395
AlwI	GGATC	2 cut(s)	27, 905
AlwNI	CAGNNNCTG	2 cut(s)	28, 746
Aor51HI	AGCGCT	1 cut(s)	904
AoxI	GGCC	3 cut(s)	855, 1015, 1473
ApeKI	GCWGC	3 cut(s)	203, 740, 851
ApoI	RAATTY	1 cut(s)	172
AspA2I	CCTAGG	1 cut(s)	1238
AspLEI	GCGC	1 cut(s)	905
AspS9I	GGNCC	1 cut(s)	436
AsuC2I	CCSGG	4 cut(s)	17, 94, 440, 1052
AsuHPI	GGTGA	6 cut(s)	16, 266, 349, 557, 619, 1040
AvaII	GGWCC	1 cut(s)	436
AvrII	CCTAGG	1 cut(s)	1238
BauI	CACGAG	3 cut(s)	277, 992, 1120
BbvCI	CCTCAGC	2 cut(s)	449, 554
BbvI	GCAGC	3 cut(s)	190, 752, 838
BccI	CCATC	2 cut(s)	334, 1171
BceAI	ACGGC	5 cut(s)	365, 547, 556, 842, 1030
BcgI	CGANNNNNNTGC	2 cut(s)	1270, 1304
BciT130I	CCWGG	4 cut(s)	29, 287, 1395, 1440
BciVI	GTATCC	1 cut(s)	1501
BclI	TGATCA	1 cut(s)	6
BcnI	CCSGG	4 cut(s)	17, 94, 440, 1052
BcoDI	GTCTC	9 cut(s)	117, 276, 612, 662, 702, 780, 1191, 1204, 1395
BfaI	CTAG	4 cut(s)	260, 615, 705, 1239
BfmI	CTRYAG	1 cut(s)	807
BfoI	RGCGCY	1 cut(s)	906
BfuI	GTATCC	1 cut(s)	1501
BisI	GCNGC	9 cut(s)	204, 274, 456, 582, 741, 834, 852, 855, 876
BlnI	CCTAGG	1 cut(s)	1238
BlsI	GCNGC	9 cut(s)	205, 275, 457, 583, 742, 835, 853, 856, 877
BmcAI	AGTACT	1 cut(s)	1154
Bme1390I	CCNGG	8 cut(s)	17, 29, 94, 287, 440, 1052, 1395, 1440
Bme18I	GGWCC	1 cut(s)	436
BmgBI	CACGTC	1 cut(s)	463
BmgT120I	GGNCC	1 cut(s)	436
BmiI	GGNNCC	3 cut(s)	91, 437, 438
BmrFI	CCNGG	8 cut(s)	17, 29, 94, 287, 440, 1052, 1395, 1440
BmrI	ACTGGG	1 cut(s)	850
BmsI	GCATC	1 cut(s)	1243
BmuI	ACTGGG	1 cut(s)	850
BpmI	CTGGAG	1 cut(s)	1377
Bpu10I	CCTNAGC	3 cut(s)	449, 554, 1275
BpuEI	CTTGAG	4 cut(s)	535, 635, 714, 1370
BpuMI	CCSGG	4 cut(s)	17, 94, 440, 1052
Bsa29I	ATCGAT	1 cut(s)	588
BsaAI	YACGTR	1 cut(s)	406
BsaBI	GATNNNNATC	1 cut(s)	1359
BsaHI	GRCGYC	1 cut(s)	695
BsaI	GGTCTC	2 cut(s)	276, 662
BsaJI	CCNNGG	4 cut(s)	137, 431, 1238, 1439
BsaWI	WCCGGW	1 cut(s)	251
BsaXI	ACNNNNNCTCC	4 cut(s)	511, 541, 1004, 1034
Bsc4I	CCNNNNNNNGG	2 cut(s)	237, 678
Bse1I	ACTGG	2 cut(s)	845, 1042
Bse3DI	GCAATG	2 cut(s)	777, 1462
Bse8I	GATNNNNATC	1 cut(s)	1359
BseBI	CCWGG	4 cut(s)	29, 287, 1395, 1440
BseCI	ATCGAT	1 cut(s)	588
BseDI	CCNNGG	4 cut(s)	137, 431, 1238, 1439
BseGI	GGATG	3 cut(s)	1168, 1234, 1360
BseJI	GATNNNNATC	1 cut(s)	1359
BseLI	CCNNNNNNNGG	2 cut(s)	237, 678
BseMI	GCAATG	2 cut(s)	777, 1462
BseMII	CTCAG	5 cut(s)	440, 473, 545, 1038, 1045
BseNI	ACTGG	2 cut(s)	845, 1042
BseRI	GAGGAG	8 cut(s)	220, 344, 347, 532, 806, 1012, 1196, 1362
BseX3I	CGGCCG	1 cut(s)	855
BseXI	GCAGC	3 cut(s)	190, 752, 838
BseYI	CCCAGC	1 cut(s)	490
BsgI	GTGCAG	2 cut(s)	732, 1305
Bsh1285I	CGRYCG	1 cut(s)	858
BshFI	GGCC	3 cut(s)	857, 1017, 1475
BshVI	ATCGAT	1 cut(s)	588
BsiEI	CGRYCG	1 cut(s)	858
BsiSI	CCGG	6 cut(s)	16, 93, 234, 252, 440, 1051
BsiWI	CGTACG	2 cut(s)	573, 859
BslFI	GGGAC	2 cut(s)	449, 1067
BslI	CCNNNNNNNGG	2 cut(s)	237, 678
BsmAI	GTCTC	9 cut(s)	117, 276, 612, 662, 702, 780, 1191, 1204, 1395
BsmBI	CGTCTC	2 cut(s)	702, 780
BsmFI	GGGAC	2 cut(s)	449, 1067
BsnI	GGCC	3 cut(s)	857, 1017, 1475
Bso31I	GGTCTC	2 cut(s)	276, 662
Bsp143I	GATC	5 cut(s)	6, 19, 119, 181, 897
Bsp19I	CCATGG	1 cut(s)	431
BspANI	GGCC	3 cut(s)	857, 1017, 1475
BspCNI	CTCAG	5 cut(s)	441, 474, 546, 1037, 1044
BspDI	ATCGAT	1 cut(s)	588
BspLI	GGNNCC	3 cut(s)	91, 437, 438
BspPI	GGATC	2 cut(s)	27, 905
BspQI	GCTCTTC	1 cut(s)	954
BspTNI	GGTCTC	2 cut(s)	276, 662
BsrBI	CCGCTC	1 cut(s)	777
BsrDI	GCAATG	2 cut(s)	777, 1462
BsrI	ACTGG	2 cut(s)	845, 1042
BssECI	CCNNGG	4 cut(s)	137, 431, 1238, 1439
BssMI	GATC	5 cut(s)	6, 19, 119, 181, 897
BssNI	GRCGYC	1 cut(s)	695
BssSI	CACGAG	3 cut(s)	277, 992, 1120
BssT1I	CCWWGG	2 cut(s)	431, 1238
Bst2BI	CACGAG	3 cut(s)	277, 992, 1120
Bst2UI	CCWGG	4 cut(s)	29, 287, 1395, 1440
Bst4CI	ACNGT	1 cut(s)	60
Bst6I	CTCTTC	3 cut(s)	321, 593, 954
BstACI	GRCGYC	1 cut(s)	695
BstAPI	GCANNNNNTGC	1 cut(s)	746
BstBAI	YACGTR	1 cut(s)	406
BstC8I	GCNNGC	5 cut(s)	208, 831, 1232, 1302, 1342
BstDEI	CTNAG	6 cut(s)	449, 482, 554, 1024, 1031, 1275
BstDSI	CCRYGG	1 cut(s)	431
BstEII	GGTNACC	1 cut(s)	254
BstENI	CCTNNNNNAGG	1 cut(s)	235
BstF5I	GGATG	3 cut(s)	1168, 1234, 1360
BstH2I	RGCGCY	1 cut(s)	906
BstHHI	GCGC	1 cut(s)	905
BstKTI	GATC	5 cut(s)	9, 22, 122, 184, 900
BstMAI	GTCTC	9 cut(s)	117, 276, 612, 662, 702, 780, 1191, 1204, 1395
BstMBI	GATC	5 cut(s)	6, 19, 119, 181, 897
BstMCI	CGRYCG	1 cut(s)	858
BstMWI	GCNNNNNNNGC	8 cut(s)	216, 386, 464, 487, 746, 881, 944, 1297
BstNI	CCWGG	4 cut(s)	29, 287, 1395, 1440
BstPI	GGTNACC	1 cut(s)	254
BstSCI	CCNGG	8 cut(s)	15, 27, 92, 285, 438, 1050, 1393, 1438
BstSFI	CTRYAG	1 cut(s)	807
BstV1I	GCAGC	3 cut(s)	190, 752, 838
BstZI	CGGCCG	1 cut(s)	855
Bsu15I	ATCGAT	1 cut(s)	588
BsuI	GTATCC	1 cut(s)	1501
BsuRI	GGCC	3 cut(s)	857, 1017, 1475
BsuTUI	ATCGAT	1 cut(s)	588
BtgI	CCRYGG	1 cut(s)	431
BtgZI	GCGATG	1 cut(s)	1295
BtrI	CACGTC	1 cut(s)	463
BtsCI	GGATG	3 cut(s)	1168, 1234, 1360
BtsI	GCAGTG	1 cut(s)	879
BtsIMutI	CAGTG	2 cut(s)	838, 879
Cac8I	GCNNGC	5 cut(s)	208, 831, 1232, 1302, 1342
CaiI	CAGNNNCTG	2 cut(s)	28, 746
CfoI	GCGC	1 cut(s)	905
Cfr13I	GGNCC	1 cut(s)	436
ClaI	ATCGAT	1 cut(s)	588
CseI	GACGC	1 cut(s)	797
Csp6I	GTAC	4 cut(s)	511, 574, 860, 1153
CviAII	CATG	9 cut(s)	74, 391, 432, 622, 826, 1006, 1078, 1087, 1372
CviQI	GTAC	4 cut(s)	511, 574, 860, 1153
DdeI	CTNAG	6 cut(s)	449, 482, 554, 1024, 1031, 1275
DpnI	GATC	5 cut(s)	8, 21, 121, 183, 899
DpnII	GATC	5 cut(s)	6, 19, 119, 181, 897
DrdI	GACNNNNNNGTC	1 cut(s)	700
DseDI	GACNNNNNNGTC	1 cut(s)	700
EaeI	YGGCCR	1 cut(s)	855
EagI	CGGCCG	1 cut(s)	855
Eam1104I	CTCTTC	3 cut(s)	321, 593, 954
EarI	CTCTTC	3 cut(s)	321, 593, 954
EciI	GGCGGA	2 cut(s)	206, 549
EclXI	CGGCCG	1 cut(s)	855
Eco130I	CCWWGG	2 cut(s)	431, 1238
Eco31I	GGTCTC	2 cut(s)	276, 662
Eco47I	GGWCC	1 cut(s)	436
Eco47III	AGCGCT	1 cut(s)	904
Eco52I	CGGCCG	1 cut(s)	855
Eco57I	CTGAAG	2 cut(s)	617, 935
Eco91I	GGTNACC	1 cut(s)	254
EcoNI	CCTNNNNNAGG	1 cut(s)	235
EcoO109I	RGGNCCY	1 cut(s)	436
EcoO65I	GGTNACC	1 cut(s)	254
EcoRII	CCWGG	4 cut(s)	27, 285, 1393, 1438
EcoT14I	CCWWGG	2 cut(s)	431, 1238
ErhI	CCWWGG	2 cut(s)	431, 1238
Esp3I	CGTCTC	2 cut(s)	702, 780
FaeI	CATG	9 cut(s)	77, 394, 435, 625, 829, 1009, 1081, 1090, 1375
FaqI	GGGAC	2 cut(s)	449, 1067
FatI	CATG	9 cut(s)	73, 390, 431, 621, 825, 1005, 1077, 1086, 1371
FauI	CCCGC	3 cut(s)	151, 232, 671
FbaI	TGATCA	1 cut(s)	6
Fnu4HI	GCNGC	9 cut(s)	204, 274, 456, 582, 741, 834, 852, 855, 876
FokI	GGATG	3 cut(s)	1155, 1221, 1347
Fsp4HI	GCNGC	9 cut(s)	204, 274, 456, 582, 741, 834, 852, 855, 876
FspBI	CTAG	4 cut(s)	260, 615, 705, 1239
GlaI	GCGC	1 cut(s)	904
GluI	GCNGC	9 cut(s)	204, 274, 456, 582, 741, 834, 852, 855, 876
GsaI	CCCAGC	1 cut(s)	494
GsuI	CTGGAG	1 cut(s)	1377
HaeII	RGCGCY	1 cut(s)	906
HaeIII	GGCC	3 cut(s)	857, 1017, 1475
HapII	CCGG	6 cut(s)	16, 93, 234, 252, 440, 1051
HgaI	GACGC	1 cut(s)	797
HhaI	GCGC	1 cut(s)	905
Hin1I	GRCGYC	1 cut(s)	695
Hin1II	CATG	9 cut(s)	77, 394, 435, 625, 829, 1009, 1081, 1090, 1375
Hin6I	GCGC	1 cut(s)	903
HinP1I	GCGC	1 cut(s)	903
HincII	GTYRAC	2 cut(s)	52, 631
HindII	GTYRAC	2 cut(s)	52, 631
HindIII	AAGCTT	1 cut(s)	1448
HinfI	GANTC	4 cut(s)	301, 1091, 1184, 1243
HpaII	CCGG	6 cut(s)	16, 93, 234, 252, 440, 1051
HphI	GGTGA	6 cut(s)	16, 266, 349, 557, 619, 1040
Hpy166II	GTNNAC	3 cut(s)	52, 631, 1483
Hpy188I	TCNGA	4 cut(s)	24, 124, 181, 1196
Hpy188III	TCNNGA	3 cut(s)	305, 652, 1364
Hpy8I	GTNNAC	3 cut(s)	52, 631, 1483
HpyAV	CCTTC	6 cut(s)	156, 480, 604, 811, 1220, 1416
HpyCH4III	ACNGT	1 cut(s)	60
HpyCH4IV	ACGT	4 cut(s)	405, 462, 695, 928
HpyCH4V	TGCA	5 cut(s)	210, 401, 723, 749, 1322
HpyF10VI	GCNNNNNNNGC	8 cut(s)	216, 386, 464, 487, 746, 881, 944, 1297
HpyF3I	CTNAG	6 cut(s)	449, 482, 554, 1024, 1031, 1275
HpySE526I	ACGT	4 cut(s)	405, 462, 695, 928
Hsp92I	GRCGYC	1 cut(s)	695
Hsp92II	CATG	9 cut(s)	77, 394, 435, 625, 829, 1009, 1081, 1090, 1375
HspAI	GCGC	1 cut(s)	903
KflI	GGGWCCC	1 cut(s)	436
Ksp22I	TGATCA	1 cut(s)	6
Kzo9I	GATC	5 cut(s)	6, 19, 119, 181, 897
LguI	GCTCTTC	1 cut(s)	954
LmnI	GCTCC	7 cut(s)	95, 478, 748, 869, 1148, 1204, 1349
Lsp1109I	GCAGC	3 cut(s)	190, 752, 838
LweI	GCATC	1 cut(s)	1243
MaeI	CTAG	4 cut(s)	260, 615, 705, 1239
MaeII	ACGT	4 cut(s)	405, 462, 695, 928
MaeIII	GTNAC	4 cut(s)	254, 527, 1073, 1124
MalI	GATC	5 cut(s)	8, 21, 121, 183, 899
MbiI	CCGCTC	1 cut(s)	777
MboI	GATC	5 cut(s)	6, 19, 119, 181, 897
MboII	GAAGA	8 cut(s)	323, 329, 335, 338, 534, 610, 941, 1183
MfeI	CAATTG	2 cut(s)	396, 718
MluCI	AATT	9 cut(s)	41, 107, 172, 186, 396, 718, 755, 1434, 1498
MlyI	GAGTC	4 cut(s)	295, 1085, 1193, 1252
MmeI	TCCRAC	1 cut(s)	1170
MseI	TTAA	3 cut(s)	500, 1433, 1470
MspA1I	CMGCKG	1 cut(s)	203
MspI	CCGG	6 cut(s)	16, 93, 234, 252, 440, 1051
MspR9I	CCNGG	8 cut(s)	17, 29, 94, 287, 440, 1052, 1395, 1440
MunI	CAATTG	2 cut(s)	396, 718
MvaI	CCWGG	4 cut(s)	29, 287, 1395, 1440
MwoI	GCNNNNNNNGC	8 cut(s)	216, 386, 464, 487, 746, 881, 944, 1297
NciI	CCSGG	4 cut(s)	17, 94, 440, 1052
NcoI	CCATGG	1 cut(s)	431
NdeII	GATC	5 cut(s)	6, 19, 119, 181, 897
NlaIII	CATG	9 cut(s)	77, 394, 435, 625, 829, 1009, 1081, 1090, 1375
NlaIV	GGNNCC	3 cut(s)	91, 437, 438
NmeAIII	GCCGAG	1 cut(s)	162
NmuCI	GTSAC	2 cut(s)	254, 1073
PciSI	GCTCTTC	1 cut(s)	954
Pfl23II	CGTACG	2 cut(s)	573, 859
PfoI	TCCNGGA	2 cut(s)	92, 1393
PkrI	GCNGC	9 cut(s)	205, 275, 457, 583, 742, 835, 853, 856, 877
PleI	GAGTC	4 cut(s)	295, 1085, 1192, 1251
PpsI	GAGTC	4 cut(s)	295, 1085, 1192, 1251
Ppu21I	YACGTR	1 cut(s)	406
PpuMI	RGGWCCY	1 cut(s)	436
Psp5II	RGGWCCY	1 cut(s)	436
Psp6I	CCWGG	4 cut(s)	27, 285, 1393, 1438
PspEI	GGTNACC	1 cut(s)	254
PspFI	CCCAGC	1 cut(s)	490
PspGI	CCWGG	4 cut(s)	27, 285, 1393, 1438
PspLI	CGTACG	2 cut(s)	573, 859
PspN4I	GGNNCC	3 cut(s)	91, 437, 438
PspPI	GGNCC	1 cut(s)	436
PspPPI	RGGWCCY	1 cut(s)	436
PstNI	CAGNNNCTG	2 cut(s)	28, 746
PvuII	CAGCTG	1 cut(s)	203
RsaI	GTAC	4 cut(s)	512, 575, 861, 1154
RsaNI	GTAC	4 cut(s)	511, 574, 860, 1153
SapI	GCTCTTC	1 cut(s)	954
SaqAI	TTAA	3 cut(s)	500, 1433, 1470
SatI	GCNGC	9 cut(s)	204, 274, 456, 582, 741, 834, 852, 855, 876
Sau3AI	GATC	5 cut(s)	6, 19, 119, 181, 897
Sau96I	GGNCC	1 cut(s)	436
ScaI	AGTACT	1 cut(s)	1154
SchI	GAGTC	4 cut(s)	295, 1085, 1193, 1252
ScrFI	CCNGG	8 cut(s)	17, 29, 94, 287, 440, 1052, 1395, 1440
SfaNI	GCATC	1 cut(s)	1243
SfcI	CTRYAG	1 cut(s)	807
SinI	GGWCC	1 cut(s)	436
SmlI	CTYRAG	4 cut(s)	514, 650, 729, 1385
SmoI	CTYRAG	4 cut(s)	514, 650, 729, 1385
Sse9I	AATT	9 cut(s)	41, 107, 172, 186, 396, 718, 755, 1434, 1498
SspI	AATATT	2 cut(s)	1070, 1111
SspMI	CTAG	4 cut(s)	260, 615, 705, 1239
StyD4I	CCNGG	8 cut(s)	15, 27, 92, 285, 438, 1050, 1393, 1438
StyI	CCWWGG	2 cut(s)	431, 1238
TaaI	ACNGT	1 cut(s)	60
TaiI	ACGT	4 cut(s)	408, 465, 698, 931
TaqI	TCGA	4 cut(s)	588, 762, 987, 1463
TasI	AATT	9 cut(s)	41, 107, 172, 186, 396, 718, 755, 1434, 1498
TatI	WGTACW	1 cut(s)	1152
TauI	GCSGC	6 cut(s)	276, 458, 584, 836, 857, 878
Tru1I	TTAA	3 cut(s)	500, 1433, 1470
Tru9I	TTAA	3 cut(s)	500, 1433, 1470
TscAI	CASTG	2 cut(s)	845, 886
TseFI	GTSAC	2 cut(s)	254, 1073
TseI	GCWGC	3 cut(s)	203, 740, 851
Tsp45I	GTSAC	2 cut(s)	254, 1073
TspDTI	ATGAA	6 cut(s)	324, 330, 336, 1094, 1157, 1349
TspRI	CASTG	2 cut(s)	845, 886
VpaK11BI	GGWCC	1 cut(s)	436
XagI	CCTNNNNNAGG	1 cut(s)	235
XapI	RAATTY	1 cut(s)	172
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1153
XmaJI	CCTAGG	1 cut(s)	1238
XspI	CTAG	4 cut(s)	260, 615, 705, 1239
ZraI	GACGTC	1 cut(s)	696
ZrmI	AGTACT	1 cut(s)	1154

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.