Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0002215

Physical Location & Seq

Genomic Coordinates Reverse (-)

74146740 .. 74149078

Gene Structure 2339 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ34371

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1434 bp

ATGGCGGCAAAGGTTTCGAATTTCTCGGATTTGGTTCAGAGGGTGGCCGCTTCTTGCTTGCTGCACCCACTTGGCGCCGGCAGGAACGGTGACTTCGCCGTGAATGGCGCCGAAGATGAGGATGATTTCAGTGAGCTCGAGTTGGATGAGCCGGAGGAGGAAGTGAGAGAAGAGGAGGAGATTGGTGGTGGAGGAGGGTTTAGGGTTAGGGAGGAGGGGTCAAGGAAGGAGGTAATGGAGATGGAGATGGCAATGTGGGAAGTGTTTGACGCCGTTTCGGCAATGAAGAAGGCCTACGCTGGCCTGCAGAAGGCGCATAGCCCTTGGGACCCGGAGAAGATAAGGGTGGCCGACATTGCGGTGGTGGGGGAGCTGAGGAAGCTTGGAGTGTTGAGGGATAGGTTTAGGAGGAGATGTTCTGGCAGTGGAGGTCATAGAGGTGGAAGAGCGGTGGCGGGGGGTACACTGAGGGAGGTGGTGGCACCATATGAGGCGACCGTGGAGGAGCTGAAGAAGGAGGTGAAGGCTAAGGAAGTAGAGATTGATAACCTCAAGGAAAAGCTCAGTAGTGTAGTTAATGGCTCCAACGGGAATAATGGCAAGGGCAGATCTATCTCAAGGAGGAAGGTAGGTTGCAGTCAACTTCAAGTTGTAGCTGCTCCAGCACCGGATCTGTTTGAGGCAACAATGAGCCAAGTGAAAGAGGCATCAAAGTCCTTCACTTTATTGCTCCTCTCTCTCATGCGTGCCGCTCATTGGGACATTGCTGCAGCTGTGCGTTCCATTGAAGCTGCCACTGTCACTGCCATTACCACAACAGCTATTAACACATCCTCCATTCTCACAACGACCCAGAATGGCAGTGCCAAGTATGCTCTCCAGTCCTACATTTCCAGCAAAATGTTCCAAGGCTTTGATCACGAGACATTCTACATGGACGGTAGCCTCTCCTCGCTTCTCAACCCAGATCAGTACCGCCGTGATTGCTTCACTCAATACCGTGACATGAAGGCCATGGATCCTGCCGAGCTTCTTGGAATATTGCCCACGTGTCACTTTGGCAAGTTCTGCTCAAACAAGTACTTGGCCATAATTCATCCCAAGATGGAAGAGTCATTGTTTGGAGACTTGGATCAGCGACGGCAGGTCTTAGATGGAAACCACCCCAGGAGTGAGTTTTACAGTCAGTTCTTGGGGATGGCTAAAGCAGTCTGGTCACTGCACTTGCTGGCCTTCTCTCTTGACCCAACACCTAGTCAATTTGAGGCTACTAGAGGTGCTGAGTTTCATCCACACTACATGGAAAGTGTTGTCAAGTTTTCGGGTGGGCGGGTTCCTTCGGGTCAGGTTGTCGGGTTTCCTGTAAGTCCTGGGTTCAAGCTTGGAAATGGGTCTATTATCAAGGCCAGAGTTTACCTAGTTTCCAGGGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0008150 GO:0009314 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009639 GO:0009959 GO:0050896

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF641

Protein Analysis

477

Amino Acids

52.42

Weight (kDa)

6.18

Isoelectric Point (pI)

46.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF641	PF04859	77 - 194	1.3e-34	Plant protein of unknown function (DUF641)
GIL1_IRKI_C	PF24994	421 - 472	2.2e-10	GIL1/IRKI C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002215)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G58960 AT5G58960 AT5G58960
fragaria_vesca	FvH4_3g37820 FvH4_3g37850
malus_domestica	MD03G1078100.v1.1 MD11G1082800.v1.1
prunus_persica	Prupe.6G063100_v2.0.a1
pyrus_communis	pycom03g06240 pycom11g07090
rosa_chinensis	RchiOBHm_Chr5g0068001 RchiOBHm_Chr5g0068051 RchiOBHm_Chr5g0068071
rosa_laevigata	RLG00000035951 RLG00000035952
rosa_multiflora	Rmu_co8216896.1_g000001 Rmu_co8424771.1_g000001 Rmu_sc0000435.1_g000019 Rmu_sc0000435.1_g000025 Rmu_sc0000435.1_g000034
rosa_roxburghii	Rroxscaffold_1G00012550 Rroxscaffold_1G00012560 Rroxscaffold_1G00013280 Rroxscaffold_1G00013290
rosa_rugosa	Rorug05G0387200 Rorug05G0387600 Rorug05G0388100
rosa_samantha	Rh5AG446100 Rh5AG446300 Rh5AG446400 Rh5BG463600 Rh5BG464000 Rh5BG464300 Rh5CG485500 Rh5CG486000 Rh5CG486300 Rh5DG477600 Rh5DG478000 Rh5DG478300
rosa_wichuraiana	Rw5G041670 Rw5G041680 Rw5G041710 Rw5G041720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1135
AccB1I	GGYRCC	3 cut(s)	74, 107, 481
AccBSI	CCGCTC	2 cut(s)	449, 752
AciI	CCGC	8 cut(s)	5, 48, 359, 449, 455, 750, 976, 1330
AclWI	GGATC	4 cut(s)	678, 1013, 1026, 1140
AcoI	YGGCCR	3 cut(s)	45, 348, 1086
AcsI	RAATTY	1 cut(s)	19
AcuI	CTGAAG	1 cut(s)	530
AcvI	CACGTG	1 cut(s)	1050
AcyI	GRCGYC	3 cut(s)	75, 108, 270
AfaI	GTAC	3 cut(s)	463, 974, 1082
AfiI	CCNNNNNNNGG	2 cut(s)	310, 756
AflIII	ACRYGT	1 cut(s)	1049
AgsI	TTSAA	3 cut(s)	647, 788, 1378
AhdI	GACNNNNNGTC	1 cut(s)	1145
AjnI	CCWGG	3 cut(s)	1166, 1369, 1424
AloI	GAACNNNNNNTCC	2 cut(s)	400, 432
Alw21I	GWGCWC	1 cut(s)	138
Alw26I	GTCTC	2 cut(s)	917, 1119
AlwI	GGATC	4 cut(s)	678, 1013, 1026, 1140
Ama87I	CYCGRG	1 cut(s)	137
AoxI	GGCC	8 cut(s)	45, 291, 301, 348, 1011, 1086, 1230, 1404
ApeKI	GCWGC	5 cut(s)	61, 656, 767, 770, 791
ApoI	RAATTY	1 cut(s)	19
AspLEI	GCGC	3 cut(s)	77, 110, 316
AspS9I	GGNCC	1 cut(s)	328
AsuC2I	CCSGG	1 cut(s)	332
AsuHPI	GGTGA	2 cut(s)	101, 532
AsuII	TTCGAA	1 cut(s)	17
AvaI	CYCGRG	1 cut(s)	137
AvaII	GGWCC	1 cut(s)	328
BalI	TGGCCA	1 cut(s)	1088
BamHI	GGATCC	1 cut(s)	1018
BanI	GGYRCC	3 cut(s)	74, 107, 481
BanII	GRGCYC	1 cut(s)	138
BarI	GAAGNNNNNNTAC	2 cut(s)	278, 310
BauI	CACGAG	1 cut(s)	920
BbrPI	CACGTG	1 cut(s)	1050
Bbv12I	GWGCWC	1 cut(s)	138
BbvCI	CCTCAGC	1 cut(s)	374
BbvI	GCAGC	5 cut(s)	48, 643, 754, 778, 782
BccI	CCATC	5 cut(s)	235, 241, 1099, 1148, 1192
BceAI	ACGGC	4 cut(s)	83, 257, 963, 1157
BcgI	CGANNNNNNTGC	1 cut(s)	31
BciT130I	CCWGG	3 cut(s)	1168, 1371, 1426
BclI	TGATCA	1 cut(s)	916
BcnI	CCSGG	1 cut(s)	332
BcoDI	GTCTC	2 cut(s)	917, 1119
BfaI	CTAG	3 cut(s)	1254, 1272, 1418
BfmI	CTRYAG	2 cut(s)	305, 768
BfoI	RGCGCY	2 cut(s)	78, 111
BfuAI	ACCTGC	1 cut(s)	1135
BglI	GCCNNNNNGGC	1 cut(s)	278
BglII	AGATCT	1 cut(s)	608
BisI	GCNGC	8 cut(s)	6, 48, 62, 657, 750, 768, 771, 792
BlsI	GCNGC	8 cut(s)	7, 49, 63, 658, 751, 769, 772, 793
BmcAI	AGTACT	1 cut(s)	1082
Bme1390I	CCNGG	4 cut(s)	332, 1168, 1371, 1426
Bme18I	GGWCC	1 cut(s)	328
BmeRI	GACNNNNNGTC	1 cut(s)	1145
BmeT110I	CYCGRG	1 cut(s)	137
BmgT120I	GGNCC	1 cut(s)	328
BmiI	GGNNCC	8 cut(s)	76, 109, 329, 330, 483, 583, 1020, 1335
BmrFI	CCNGG	4 cut(s)	332, 1168, 1371, 1426
BmsI	GCATC	1 cut(s)	716
BpmI	CTGGAG	2 cut(s)	645, 863
Bpu10I	CCTNAGC	2 cut(s)	374, 528
Bpu14I	TTCGAA	1 cut(s)	17
BpuEI	CTTGAG	2 cut(s)	536, 601
BpuMI	CCSGG	1 cut(s)	332
BsaAI	YACGTR	1 cut(s)	1050
BsaHI	GRCGYC	3 cut(s)	75, 108, 270
BsaJI	CCNNGG	7 cut(s)	323, 498, 907, 1014, 1166, 1370, 1425
BsaWI	WCCGGW	1 cut(s)	667
BsaXI	ACNNNNNCTCC	6 cut(s)	203, 233, 400, 430, 818, 848
Bsc4I	CCNNNNNNNGG	2 cut(s)	310, 756
Bse118I	RCCGGY	1 cut(s)	77
Bse1I	ACTGG	1 cut(s)	880
Bse3DI	GCAATG	4 cut(s)	258, 288, 354, 762
BseBI	CCWGG	3 cut(s)	1168, 1371, 1426
BseDI	CCNNGG	7 cut(s)	323, 498, 907, 1014, 1166, 1370, 1425
BseGI	GGATG	6 cut(s)	127, 151, 830, 1096, 1203, 1288
BseLI	CCNNNNNNNGG	2 cut(s)	310, 756
BseMI	GCAATG	4 cut(s)	258, 288, 354, 762
BseMII	CTCAG	4 cut(s)	365, 458, 577, 1272
BseNI	ACTGG	1 cut(s)	880
BseRI	GAGGAG	9 cut(s)	170, 188, 191, 207, 227, 424, 518, 722, 940
BseXI	GCAGC	5 cut(s)	48, 643, 754, 778, 782
BsgI	GTGCAG	2 cut(s)	47, 1205
Bsh1285I	CGRYCG	1 cut(s)	498
BshFI	GGCC	8 cut(s)	47, 293, 303, 350, 1013, 1088, 1232, 1406
BshNI	GGYRCC	3 cut(s)	74, 107, 481
BsiEI	CGRYCG	1 cut(s)	498
BsiHKAI	GWGCWC	1 cut(s)	138
BsiHKCI	CYCGRG	1 cut(s)	137
BsiSI	CCGG	4 cut(s)	78, 152, 332, 668
BslFI	GGGAC	2 cut(s)	341, 773
BslI	CCNNNNNNNGG	2 cut(s)	310, 756
BsmAI	GTCTC	2 cut(s)	917, 1119
BsmFI	GGGAC	2 cut(s)	341, 773
BsnI	GGCC	8 cut(s)	47, 293, 303, 350, 1013, 1088, 1232, 1406
BsoBI	CYCGRG	1 cut(s)	137
Bsp119I	TTCGAA	1 cut(s)	17
Bsp1286I	GDGCHC	1 cut(s)	138
Bsp143I	GATC	6 cut(s)	608, 670, 916, 967, 1018, 1132
Bsp19I	CCATGG	1 cut(s)	1014
BspACI	CCGC	8 cut(s)	5, 48, 359, 449, 455, 750, 976, 1330
BspANI	GGCC	8 cut(s)	47, 293, 303, 350, 1013, 1088, 1232, 1406
BspCNI	CTCAG	4 cut(s)	366, 459, 576, 1273
BspLI	GGNNCC	8 cut(s)	76, 109, 329, 330, 483, 583, 1020, 1335
BspMAI	CTGCAG	2 cut(s)	309, 772
BspMI	ACCTGC	1 cut(s)	1135
BspPI	GGATC	4 cut(s)	678, 1013, 1026, 1140
BspQI	GCTCTTC	1 cut(s)	439
BspT104I	TTCGAA	1 cut(s)	17
BspT107I	GGYRCC	3 cut(s)	74, 107, 481
BsrBI	CCGCTC	2 cut(s)	449, 752
BsrDI	GCAATG	4 cut(s)	258, 288, 354, 762
BsrFI	RCCGGY	1 cut(s)	77
BsrI	ACTGG	1 cut(s)	880
BssAI	RCCGGY	1 cut(s)	77
BssECI	CCNNGG	7 cut(s)	323, 498, 907, 1014, 1166, 1370, 1425
BssMI	GATC	6 cut(s)	608, 670, 916, 967, 1018, 1132
BssNI	GRCGYC	3 cut(s)	75, 108, 270
BssSI	CACGAG	1 cut(s)	920
BssT1I	CCWWGG	3 cut(s)	323, 907, 1014
Bst2BI	CACGAG	1 cut(s)	920
Bst2UI	CCWGG	3 cut(s)	1168, 1371, 1426
Bst4CI	ACNGT	6 cut(s)	89, 499, 799, 941, 1001, 1184
Bst6I	CTCTTC	3 cut(s)	165, 439, 1104
BstACI	GRCGYC	3 cut(s)	75, 108, 270
BstAPI	GCANNNNNTGC	1 cut(s)	1068
BstBAI	YACGTR	1 cut(s)	1050
BstBI	TTCGAA	1 cut(s)	17
BstC8I	GCNNGC	6 cut(s)	59, 79, 301, 305, 747, 1230
BstDEI	CTNAG	6 cut(s)	374, 467, 528, 563, 1150, 1281
BstDSI	CCRYGG	2 cut(s)	498, 1014
BstENI	CCTNNNNNAGG	1 cut(s)	308
BstF5I	GGATG	6 cut(s)	127, 151, 830, 1096, 1203, 1288
BstH2I	RGCGCY	2 cut(s)	78, 111
BstHHI	GCGC	3 cut(s)	77, 110, 316
BstKTI	GATC	6 cut(s)	611, 673, 919, 970, 1021, 1135
BstMAI	GTCTC	2 cut(s)	917, 1119
BstMBI	GATC	6 cut(s)	608, 670, 916, 967, 1018, 1132
BstMCI	CGRYCG	1 cut(s)	498
BstMWI	GCNNNNNNNGC	8 cut(s)	278, 313, 356, 379, 662, 872, 984, 1068
BstNI	CCWGG	3 cut(s)	1168, 1371, 1426
BstSCI	CCNGG	4 cut(s)	330, 1166, 1369, 1424
BstSFI	CTRYAG	2 cut(s)	305, 768
BstV1I	GCAGC	5 cut(s)	48, 643, 754, 778, 782
BstX2I	RGATCY	3 cut(s)	608, 670, 1018
BstYI	RGATCY	3 cut(s)	608, 670, 1018
BsuRI	GGCC	8 cut(s)	47, 293, 303, 350, 1013, 1088, 1232, 1406
BtgI	CCRYGG	2 cut(s)	498, 1014
BtsCI	GGATG	6 cut(s)	127, 151, 830, 1096, 1203, 1288
BtsI	GCAGTG	4 cut(s)	430, 801, 868, 1217
BtsIMutI	CAGTG	7 cut(s)	136, 430, 464, 795, 801, 868, 1217
BveI	ACCTGC	1 cut(s)	1135
Cac8I	GCNNGC	6 cut(s)	59, 79, 301, 305, 747, 1230
CfoI	GCGC	3 cut(s)	77, 110, 316
Cfr10I	RCCGGY	1 cut(s)	77
Cfr13I	GGNCC	1 cut(s)	328
CseI	GACGC	1 cut(s)	278
Csp6I	GTAC	3 cut(s)	462, 973, 1081
CviAII	CATG	5 cut(s)	742, 934, 1006, 1015, 1300
CviQI	GTAC	3 cut(s)	462, 973, 1081
DdeI	CTNAG	6 cut(s)	374, 467, 528, 563, 1150, 1281
DinI	GGCGCC	2 cut(s)	76, 109
DpnI	GATC	6 cut(s)	610, 672, 918, 969, 1020, 1134
DpnII	GATC	6 cut(s)	608, 670, 916, 967, 1018, 1132
DriI	GACNNNNNGTC	1 cut(s)	1145
EaeI	YGGCCR	3 cut(s)	45, 348, 1086
Eam1104I	CTCTTC	3 cut(s)	165, 439, 1104
Eam1105I	GACNNNNNGTC	1 cut(s)	1145
EarI	CTCTTC	3 cut(s)	165, 439, 1104
Ecl136II	GAGCTC	1 cut(s)	136
Eco130I	CCWWGG	3 cut(s)	323, 907, 1014
Eco147I	AGGCCT	1 cut(s)	293
Eco24I	GRGCYC	1 cut(s)	138
Eco47I	GGWCC	1 cut(s)	328
Eco53kI	GAGCTC	1 cut(s)	136
Eco57I	CTGAAG	1 cut(s)	530
Eco72I	CACGTG	1 cut(s)	1050
Eco88I	CYCGRG	1 cut(s)	137
EcoICRI	GAGCTC	1 cut(s)	136
EcoNI	CCTNNNNNAGG	1 cut(s)	308
EcoO109I	RGGNCCY	1 cut(s)	328
EcoRII	CCWGG	3 cut(s)	1166, 1369, 1424
EcoT14I	CCWWGG	3 cut(s)	323, 907, 1014
EcoT38I	GRGCYC	1 cut(s)	138
EgeI	GGCGCC	2 cut(s)	76, 109
EheI	GGCGCC	2 cut(s)	76, 109
ErhI	CCWWGG	3 cut(s)	323, 907, 1014
FaeI	CATG	5 cut(s)	745, 937, 1009, 1018, 1303
FaqI	GGGAC	2 cut(s)	341, 773
FatI	CATG	5 cut(s)	741, 933, 1005, 1014, 1299
FauI	CCCGC	2 cut(s)	448, 1323
FauNDI	CATATG	1 cut(s)	487
FbaI	TGATCA	1 cut(s)	916
Fnu4HI	GCNGC	8 cut(s)	6, 48, 62, 657, 750, 768, 771, 792
FokI	GGATG	6 cut(s)	134, 158, 817, 1083, 1210, 1275
FriOI	GRGCYC	1 cut(s)	138
Fsp4HI	GCNGC	8 cut(s)	6, 48, 62, 657, 750, 768, 771, 792
FspBI	CTAG	3 cut(s)	1254, 1272, 1418
GlaI	GCGC	3 cut(s)	76, 109, 315
GluI	GCNGC	8 cut(s)	6, 48, 62, 657, 750, 768, 771, 792
GsuI	CTGGAG	2 cut(s)	645, 863
HaeII	RGCGCY	2 cut(s)	78, 111
HaeIII	GGCC	8 cut(s)	47, 293, 303, 350, 1013, 1088, 1232, 1406
HapII	CCGG	4 cut(s)	78, 152, 332, 668
HgaI	GACGC	1 cut(s)	278
HhaI	GCGC	3 cut(s)	77, 110, 316
Hin1I	GRCGYC	3 cut(s)	75, 108, 270
Hin1II	CATG	5 cut(s)	745, 937, 1009, 1018, 1303
Hin6I	GCGC	3 cut(s)	75, 108, 314
HinP1I	GCGC	3 cut(s)	75, 108, 314
HincII	GTYRAC	1 cut(s)	641
HindII	GTYRAC	1 cut(s)	641
HindIII	AAGCTT	2 cut(s)	380, 1379
HinfI	GANTC	1 cut(s)	1112
HpaII	CCGG	4 cut(s)	78, 152, 332, 668
HphI	GGTGA	2 cut(s)	101, 532
Hpy166II	GTNNAC	3 cut(s)	464, 641, 1414
Hpy188I	TCNGA	2 cut(s)	28, 39
Hpy188III	TCNNGA	2 cut(s)	920, 1241
Hpy8I	GTNNAC	3 cut(s)	464, 641, 1414
Hpy99I	CGWCG	1 cut(s)	1143
HpyCH4III	ACNGT	6 cut(s)	89, 499, 799, 941, 1001, 1184
HpyCH4IV	ACGT	1 cut(s)	1049
HpyCH4V	TGCA	5 cut(s)	64, 307, 636, 770, 1222
HpyF10VI	GCNNNNNNNGC	8 cut(s)	278, 313, 356, 379, 662, 872, 984, 1068
HpyF3I	CTNAG	6 cut(s)	374, 467, 528, 563, 1150, 1281
HpySE526I	ACGT	1 cut(s)	1049
Hsp92I	GRCGYC	3 cut(s)	75, 108, 270
Hsp92II	CATG	5 cut(s)	745, 937, 1009, 1018, 1303
HspAI	GCGC	3 cut(s)	75, 108, 314
KasI	GGCGCC	2 cut(s)	74, 107
KflI	GGGWCCC	1 cut(s)	328
KroI	GCCGGC	1 cut(s)	77
KroNI	GCCGGC	1 cut(s)	79
Ksp22I	TGATCA	1 cut(s)	916
Kzo9I	GATC	6 cut(s)	608, 670, 916, 967, 1018, 1132
LguI	GCTCTTC	1 cut(s)	439
LmnI	GCTCC	5 cut(s)	370, 505, 587, 664, 735
Lsp1109I	GCAGC	5 cut(s)	48, 643, 754, 778, 782
LweI	GCATC	1 cut(s)	716
MaeI	CTAG	3 cut(s)	1254, 1272, 1418
MaeII	ACGT	1 cut(s)	1049
MaeIII	GTNAC	5 cut(s)	89, 799, 1001, 1052, 1215
MalI	GATC	6 cut(s)	610, 672, 918, 969, 1020, 1134
MbiI	CCGCTC	2 cut(s)	449, 752
MboI	GATC	6 cut(s)	608, 670, 916, 967, 1018, 1132
MboII	GAAGA	7 cut(s)	125, 182, 298, 349, 456, 523, 1121
MflI	RGATCY	3 cut(s)	608, 670, 1018
MhlI	GDGCHC	1 cut(s)	138
MlsI	TGGCCA	1 cut(s)	1088
MluCI	AATT	3 cut(s)	19, 1092, 1259
MluNI	TGGCCA	1 cut(s)	1088
Mly113I	GGCGCC	2 cut(s)	75, 108
MlyI	GAGTC	1 cut(s)	1121
MmeI	TCCRAC	2 cut(s)	123, 609
Mox20I	TGGCCA	1 cut(s)	1088
MroNI	GCCGGC	1 cut(s)	77
MscI	TGGCCA	1 cut(s)	1088
MseI	TTAA	2 cut(s)	576, 825
MslI	CAYNNNNRTG	2 cut(s)	359, 438
Msp20I	TGGCCA	1 cut(s)	1088
MspA1I	CMGCKG	1 cut(s)	773
MspI	CCGG	4 cut(s)	78, 152, 332, 668
MspR9I	CCNGG	4 cut(s)	332, 1168, 1371, 1426
MvaI	CCWGG	3 cut(s)	1168, 1371, 1426
MwoI	GCNNNNNNNGC	8 cut(s)	278, 313, 356, 379, 662, 872, 984, 1068
NaeI	GCCGGC	1 cut(s)	79
NarI	GGCGCC	2 cut(s)	75, 108
NciI	CCSGG	1 cut(s)	332
NcoI	CCATGG	1 cut(s)	1014
NdeI	CATATG	1 cut(s)	487
NdeII	GATC	6 cut(s)	608, 670, 916, 967, 1018, 1132
NgoMIV	GCCGGC	1 cut(s)	77
NlaIII	CATG	5 cut(s)	745, 937, 1009, 1018, 1303
NlaIV	GGNNCC	8 cut(s)	76, 109, 329, 330, 483, 583, 1020, 1335
NmeAIII	GCCGAG	1 cut(s)	1051
NmuCI	GTSAC	5 cut(s)	89, 799, 1001, 1052, 1215
NspV	TTCGAA	1 cut(s)	17
PaeR7I	CTCGAG	1 cut(s)	137
PceI	AGGCCT	1 cut(s)	293
PciSI	GCTCTTC	1 cut(s)	439
PdiI	GCCGGC	1 cut(s)	79
PkrI	GCNGC	8 cut(s)	7, 49, 63, 658, 751, 769, 772, 793
PleI	GAGTC	1 cut(s)	1120
PluTI	GGCGCC	2 cut(s)	78, 111
PmaCI	CACGTG	1 cut(s)	1050
PmlI	CACGTG	1 cut(s)	1050
PpsI	GAGTC	1 cut(s)	1120
Ppu21I	YACGTR	1 cut(s)	1050
PpuMI	RGGWCCY	1 cut(s)	328
Psp124BI	GAGCTC	1 cut(s)	138
Psp5II	RGGWCCY	1 cut(s)	328
Psp6I	CCWGG	3 cut(s)	1166, 1369, 1424
PspCI	CACGTG	1 cut(s)	1050
PspGI	CCWGG	3 cut(s)	1166, 1369, 1424
PspN4I	GGNNCC	8 cut(s)	76, 109, 329, 330, 483, 583, 1020, 1335
PspPI	GGNCC	1 cut(s)	328
PspPPI	RGGWCCY	1 cut(s)	328
PspXI	VCTCGAGB	1 cut(s)	137
PstI	CTGCAG	2 cut(s)	309, 772
PsuI	RGATCY	3 cut(s)	608, 670, 1018
PvuII	CAGCTG	1 cut(s)	773
RsaI	GTAC	3 cut(s)	463, 974, 1082
RsaNI	GTAC	3 cut(s)	462, 973, 1081
RseI	CAYNNNNRTG	2 cut(s)	359, 438
SacI	GAGCTC	1 cut(s)	138
SapI	GCTCTTC	1 cut(s)	439
SaqAI	TTAA	2 cut(s)	576, 825
SatI	GCNGC	8 cut(s)	6, 48, 62, 657, 750, 768, 771, 792
Sau3AI	GATC	6 cut(s)	608, 670, 916, 967, 1018, 1132
Sau96I	GGNCC	1 cut(s)	328
ScaI	AGTACT	1 cut(s)	1082
SchI	GAGTC	1 cut(s)	1121
ScrFI	CCNGG	4 cut(s)	332, 1168, 1371, 1426
SduI	GDGCHC	1 cut(s)	138
SfaNI	GCATC	1 cut(s)	716
SfcI	CTRYAG	2 cut(s)	305, 768
SfoI	GGCGCC	2 cut(s)	76, 109
Sfr274I	CTCGAG	1 cut(s)	137
SfuI	TTCGAA	1 cut(s)	17
SinI	GGWCC	1 cut(s)	328
SlaI	CTCGAG	1 cut(s)	137
SmiMI	CAYNNNNRTG	2 cut(s)	359, 438
SmlI	CTYRAG	3 cut(s)	137, 551, 616
SmoI	CTYRAG	3 cut(s)	137, 551, 616
Sse9I	AATT	3 cut(s)	19, 1092, 1259
SseBI	AGGCCT	1 cut(s)	293
SsiI	CCGC	8 cut(s)	5, 48, 359, 449, 455, 750, 976, 1330
SspDI	GGCGCC	2 cut(s)	74, 107
SspI	AATATT	1 cut(s)	1041
SspMI	CTAG	3 cut(s)	1254, 1272, 1418
SstI	GAGCTC	1 cut(s)	138
StuI	AGGCCT	1 cut(s)	293
StyD4I	CCNGG	4 cut(s)	330, 1166, 1369, 1424
StyI	CCWWGG	3 cut(s)	323, 907, 1014
TaaI	ACNGT	6 cut(s)	89, 499, 799, 941, 1001, 1184
TaiI	ACGT	1 cut(s)	1052
TaqI	TCGA	2 cut(s)	17, 138
TasI	AATT	3 cut(s)	19, 1092, 1259
TatI	WGTACW	1 cut(s)	1080
TauI	GCSGC	3 cut(s)	8, 50, 752
Tru1I	TTAA	2 cut(s)	576, 825
Tru9I	TTAA	2 cut(s)	576, 825
TscAI	CASTG	7 cut(s)	136, 430, 471, 802, 808, 868, 1224
TseFI	GTSAC	5 cut(s)	89, 799, 1001, 1052, 1215
TseI	GCWGC	5 cut(s)	61, 656, 767, 770, 791
Tsp45I	GTSAC	5 cut(s)	89, 799, 1001, 1052, 1215
TspDTI	ATGAA	4 cut(s)	299, 1022, 1085, 1277
TspRI	CASTG	7 cut(s)	136, 430, 471, 802, 808, 868, 1224
VpaK11BI	GGWCC	1 cut(s)	328
XagI	CCTNNNNNAGG	1 cut(s)	308
XapI	RAATTY	1 cut(s)	19
XhoI	CTCGAG	1 cut(s)	137
XspI	CTAG	3 cut(s)	1254, 1272, 1418
ZrmI	AGTACT	1 cut(s)	1082

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.