Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0006248

Physical Location & Seq

Genomic Coordinates Reverse (-)

36800539 .. 36804385

Gene Structure 3847 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g44130.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2049 bp

ATGGCTAGTAGGGAACACGAAACGAGCGCGCAACCGTGGGGGACGTTAGAGGAGCTTTTGCTCGTGTGCGCCGTGAACCGCCACGGCCCCAACAGCTGGGACTCCGTCGCGTCGGAGCTTCACTCCCGAAGCTCCTCGTCCTCCGCCGCGCCGGCCCTCACTCCTCACAGCTGTAGGGACAAGTTCGACGACCTCAGACGCAGATACGACGCCGCCGCCGACGCAGACGGCGGCGTTGATGTGATGGTTGACGAGCTCCGCAGGCTAAGGGTCGAGGAGCTCCGCCGCGAGGTCCGCCGCCGCGACGTTTCGATCGTGTCGTTGGAGTCGAAGGTGAAGAAGATGGAGGAGGACAGAGACCGGAGCTTGAATCCGCCGCCGCCGCCTCCGGCAGAGGATCTCCATCGCGGCGGCGGAGGAGAAGAAACAGCGCCATCGGAGAAACTCGCCGGAAAATCAAACTCCGGCGAGGACTTCGTCTCCGATTCCTCGGAACGCGAGAACCGATCCTTCAACGAGTCCAATTCCACAAGCCAGCGAAGCGACGCGAAGCCAAACGGCGTCGTCGAGAAAAAAGCGGAAGCCGACGTGGCGCCCGGCCCGGGATCAGATCCGGCCCAGCCTCAGACCCGATCCGAACCGGCCTCCGCCAACGGGAAAGTGATCGACGACGACGACGTGGATGGAGGAGAGCCGTCGGGTCGACCCGACGAGGTGGTCGGGGCGAAACGGGCGGTGGAGAAGGAGGTGAGGAAGCAGAACAACAGCGATGTGCAAAGCTCGGCTAGCTTGTCGAGGAAGAGGAAACGACGTCGTAAAGGTGGCGAGAGTAGCAGCGGCGAAGAGCCCGAGGGTGGTGAGGAAGTTTCTCCCGCCACCACGAAACGGGTTAAGCTCGTTAAACTTGAGCCGTTGGTCAAGGTCCTCAGGCTCGTCCGCTCTCATCGGCTCGGCTCCGTTTTCCAGCGCCGGCTTCGGAGCCAGGAGTCACAAAGGTACAAGAACCTTATTAGAGAACACGTGGACCTCCACGTGGTCCAATCCAGGCTCGACAAAGGGGTCTACAAAGACTGCAGCCACAAGTTCTTCCGCGACCTCCTCCTCGTCTTCAGCAACGCCGTCGTCTTCTACCGCAAGGCCGCGCCGGAACACGTGGCGGCTCTAGAGCTACGCTCGCTGGTGTTGAAGGAAATGAACGACCAGCTACCGAAACCTCAACCCGCCGTGAGTACAGTGAAGCCAAAGCCCAACATAGAGTCGGATATCACTACTACTACTACTACAACGTCCATGAGACCCAGCAAGTCGTCTTCGATTGTTGTGTGTGGTAAACGTGGTTCCATCAATGCATTATCGGAGAACAAGAAAGGAACTGTTCGGAAGGTGGAGGTGGAAGAGAAAGAAGCGAAGGTGAAGGTTGAAGACATTGATGCTACGGTGAAGGTCGAGGAGAAGGGTGTGAGGAAGAGAAGGTCGACTCAAGAAAGAAGGGGAGGGGGAAGGCTGAGGACGACGACGACGAACAGGAAGAATGTAGACGCGAAGACGAATGTTAATGAGTCCGGCGGAAATGGAGTGAGTTTGCATGAGGGTTTGGAGGTGGTGAAGACGGAGAAGAAAGAAGACCTGAAGAAGAAGCAAGGCGCCGCGAGCTTCTTGAAGAGAATGAAGCAGAATAGTGGGAGAGGAGTTGGGCGGGGTAGTAATGGGTCGGATGTTTCAGAGGATGAGAGCAAGGATTGCATGGTGGATGAAGAAGAGGAGGATGAGGTGGAGGTAGAGCAGGAAGAAAAGAAGAAAAAGAGGACAGGTAGGAAGAAAACGGACCAGGTGGAGAAGAAAGAGAGGGTGACTCGTAGCGCTAGTGGAAATCGGGGAAGGCGAGGGGGAAGAGGACAGGAGAGCGGTGGGAGGGGGAGGAGAGGGGTCGGGCGGCCGCCTAAGAAACCAGAGACGGCGGTGGCTGGAAGCGGAAAGAGGGGGAGAGACAATGGCGAGGCGGATCAGGTGGGAAGTGCAGGGAGGCCGAGGAAACGAACAAGGAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain Myb_DNA-binding

Protein Analysis

683

Amino Acids

75.18

Weight (kDa)

9.65

Isoelectric Point (pI)

60.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	11 - 61	9.6e-07	Myb-like DNA-binding domain
Bromodomain	PF00439	307 - 388	3.2e-08	Bromodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006248)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44430 AT3G60110
fragaria_vesca	FvH4_3g44130 FvH4_3g44130 FvH4_3g44130
malus_domestica	MD03G1017000.v1.1 MD11G1017600.v1.1 MD11G1018000.v1.1 MD11G1018200.v1.1
prunus_persica	Prupe.6G015400_v2.0.a1
pyrus_communis	pycom03g01460 pycom03g01470 pycom11g01250 pycom11g01320
rosa_chinensis	RchiOBHm_Chr5g0080461
rosa_laevigata	RLG00000036858
rosa_multiflora	Rmu_co8095392.1_g000001 Rmu_sc0020711.1_g000001 Rmu_sc0025164.1_g000001
rosa_roxburghii	Rroxscaffold_1G00002940
rosa_rugosa	Rorug05G0469000 Rorug05G0469100
rosa_samantha	Rh5AG522700 Rh5BG544300 Rh5CG567900 Rh5DG554600
rosa_wichuraiana	Rw0G023230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	716, 1058
AatII	GACGTC	1 cut(s)	814
AccB1I	GGYRCC	2 cut(s)	592, 1643
AccB7I	CCANNNNNTGG	1 cut(s)	96
AccBSI	CCGCTC	2 cut(s)	939, 1905
AccI	GTMKAC	4 cut(s)	703, 1062, 1475, 1536
AclWI	GGATC	6 cut(s)	405, 501, 605, 613, 627, 2010
AcoI	YGGCCR	1 cut(s)	1934
AcuI	CTGAAG	2 cut(s)	1093, 1649
AcvI	CACGTG	3 cut(s)	1021, 1033, 1153
AcyI	GRCGYC	5 cut(s)	210, 561, 593, 811, 1644
AfaI	GTAC	2 cut(s)	998, 1231
AfeI	AGCGCT	1 cut(s)	1861
AfiI	CCNNNNNNNGG	7 cut(s)	96, 289, 602, 654, 854, 885, 1033
AflIII	ACRYGT	2 cut(s)	1018, 1150
AgsI	TTSAA	5 cut(s)	370, 514, 1186, 1421, 1660
AjiI	CACGTC	2 cut(s)	589, 679
AjnI	CCWGG	3 cut(s)	981, 1043, 1827
Alw21I	GWGCWC	2 cut(s)	258, 282
Alw26I	GTCTC	5 cut(s)	351, 484, 1288, 1946, 1980
AlwI	GGATC	6 cut(s)	405, 501, 605, 613, 627, 2010
Ama87I	CYCGRG	2 cut(s)	601, 848
Aor51HI	AGCGCT	1 cut(s)	1861
AoxI	GGCC	8 cut(s)	85, 153, 598, 615, 642, 1137, 1934, 2024
ApeKI	GCWGC	2 cut(s)	834, 1074
AspS9I	GGNCC	9 cut(s)	86, 154, 292, 599, 616, 922, 1024, 1036, 1825
AsuC2I	CCSGG	3 cut(s)	597, 602, 603
AsuHPI	GGTGA	7 cut(s)	346, 760, 869, 1423, 1450, 1615, 1861
AsuNHI	GCTAGC	1 cut(s)	785
AvaI	CYCGRG	2 cut(s)	601, 848
AvaII	GGWCC	5 cut(s)	292, 922, 1024, 1036, 1825
AxyI	CCTNAGG	1 cut(s)	926
BanI	GGYRCC	2 cut(s)	592, 1643
BanII	GRGCYC	3 cut(s)	258, 282, 849
BauI	CACGAG	1 cut(s)	62
BbrPI	CACGTG	3 cut(s)	1021, 1033, 1153
BbsI	GAAGAC	7 cut(s)	1099, 1117, 1302, 1428, 1550, 1613, 1629
Bbv12I	GWGCWC	2 cut(s)	258, 282
BbvCI	CCTCAGC	1 cut(s)	1505
BbvI	GCAGC	2 cut(s)	846, 1086
BccI	CCATC	6 cut(s)	238, 337, 411, 442, 677, 1349
BceAI	ACGGC	9 cut(s)	56, 100, 244, 574, 679, 895, 1103, 1208, 1971
BcgI	CGANNNNNNTGC	2 cut(s)	1102, 1136
BciT130I	CCWGG	3 cut(s)	983, 1045, 1829
BcnI	CCSGG	3 cut(s)	597, 602, 603
BcoDI	GTCTC	5 cut(s)	351, 484, 1288, 1946, 1980
BfaI	CTAG	4 cut(s)	6, 786, 1163, 1863
BfmI	CTRYAG	2 cut(s)	172, 1072
BfoI	RGCGCY	5 cut(s)	434, 596, 970, 1647, 1863
BglI	GCCNNNNNGGC	2 cut(s)	152, 590
Bme1390I	CCNGG	6 cut(s)	597, 602, 603, 983, 1045, 1829
Bme18I	GGWCC	5 cut(s)	292, 922, 1024, 1036, 1825
BmeT110I	CYCGRG	2 cut(s)	601, 848
BmgBI	CACGTC	2 cut(s)	589, 679
BmgT120I	GGNCC	9 cut(s)	86, 154, 292, 599, 616, 922, 1024, 1036, 1825
BmiI	GGNNCC	6 cut(s)	88, 594, 955, 980, 1339, 1645
BmrFI	CCNGG	6 cut(s)	597, 602, 603, 983, 1045, 1829
BmsI	GCATC	1 cut(s)	1420
BmtI	GCTAGC	1 cut(s)	789
BpiI	GAAGAC	7 cut(s)	1099, 1117, 1302, 1428, 1550, 1613, 1629
BplI	GAGNNNNNCTC	6 cut(s)	107, 139, 1157, 1189, 1837, 1869
Bpu10I	CCTNAGC	2 cut(s)	266, 1505
BpuEI	CTTGAG	2 cut(s)	926, 1464
BpuMI	CCSGG	3 cut(s)	597, 602, 603
BsaAI	YACGTR	3 cut(s)	1021, 1033, 1153
BsaBI	GATNNNNATC	1 cut(s)	402
BsaHI	GRCGYC	5 cut(s)	210, 561, 593, 811, 1644
BsaI	GGTCTC	2 cut(s)	351, 1288
BsaJI	CCNNGG	6 cut(s)	35, 82, 489, 601, 849, 2027
BsaWI	WCCGGW	1 cut(s)	360
BsaXI	ACNNNNNCTCC	2 cut(s)	464, 494
Bsc4I	CCNNNNNNNGG	7 cut(s)	96, 289, 602, 654, 854, 885, 1033
Bse118I	RCCGGY	3 cut(s)	151, 640, 969
Bse21I	CCTNAGG	1 cut(s)	926
Bse8I	GATNNNNATC	1 cut(s)	402
BseBI	CCWGG	3 cut(s)	983, 1045, 1829
BseDI	CCNNGG	6 cut(s)	35, 82, 489, 601, 849, 2027
BseGI	GGATG	5 cut(s)	688, 1720, 1732, 1756, 1771
BseJI	GATNNNNATC	1 cut(s)	402
BseLI	CCNNNNNNNGG	7 cut(s)	96, 289, 602, 654, 854, 885, 1033
BseMII	CTCAG	4 cut(s)	208, 638, 940, 1496
BsePI	GCGCGC	1 cut(s)	27
BseX3I	CGGCCG	1 cut(s)	1934
BseXI	GCAGC	2 cut(s)	846, 1086
BseYI	CCCAGC	3 cut(s)	96, 618, 1298
BsgI	GTGCAG	1 cut(s)	2037
Bsh1285I	CGRYCG	2 cut(s)	315, 1937
BshFI	GGCC	8 cut(s)	87, 155, 600, 617, 644, 1139, 1936, 2026
BshNI	GGYRCC	2 cut(s)	592, 1643
BsiEI	CGRYCG	2 cut(s)	315, 1937
BsiHKAI	GWGCWC	2 cut(s)	258, 282
BsiHKCI	CYCGRG	2 cut(s)	601, 848
BslFI	GGGAC	3 cut(s)	55, 113, 191
BslI	CCNNNNNNNGG	7 cut(s)	96, 289, 602, 654, 854, 885, 1033
BsmAI	GTCTC	5 cut(s)	351, 484, 1288, 1946, 1980
BsmBI	CGTCTC	2 cut(s)	484, 1946
BsmFI	GGGAC	3 cut(s)	55, 113, 191
BsnI	GGCC	8 cut(s)	87, 155, 600, 617, 644, 1139, 1936, 2026
Bso31I	GGTCTC	2 cut(s)	351, 1288
BsoBI	CYCGRG	2 cut(s)	601, 848
Bsp1286I	GDGCHC	3 cut(s)	258, 282, 849
Bsp143I	GATC	8 cut(s)	312, 397, 506, 605, 610, 632, 663, 2002
BspANI	GGCC	8 cut(s)	87, 155, 600, 617, 644, 1139, 1936, 2026
BspCNI	CTCAG	4 cut(s)	207, 637, 939, 1497
BspLI	GGNNCC	6 cut(s)	88, 594, 955, 980, 1339, 1645
BspMAI	CTGCAG	1 cut(s)	1076
BspOI	GCTAGC	1 cut(s)	789
BspPI	GGATC	6 cut(s)	405, 501, 605, 613, 627, 2010
BspQI	GCTCTTC	1 cut(s)	837
BspT107I	GGYRCC	2 cut(s)	592, 1643
BspTNI	GGTCTC	2 cut(s)	351, 1288
BsrBI	CCGCTC	2 cut(s)	939, 1905
BsrFI	RCCGGY	3 cut(s)	151, 640, 969
BssAI	RCCGGY	3 cut(s)	151, 640, 969
BssECI	CCNNGG	6 cut(s)	35, 82, 489, 601, 849, 2027
BssHII	GCGCGC	1 cut(s)	27
BssMI	GATC	8 cut(s)	312, 397, 506, 605, 610, 632, 663, 2002
BssNI	GRCGYC	5 cut(s)	210, 561, 593, 811, 1644
BssSI	CACGAG	1 cut(s)	62
Bst2BI	CACGAG	1 cut(s)	62
Bst2UI	CCWGG	3 cut(s)	983, 1045, 1829
Bst4CI	ACNGT	4 cut(s)	36, 1234, 1375, 1438
Bst6I	CTCTTC	7 cut(s)	794, 837, 1389, 1460, 1655, 1752, 1885
BstACI	GRCGYC	5 cut(s)	210, 561, 593, 811, 1644
BstAPI	GCANNNNNTGC	1 cut(s)	1740
BstBAI	YACGTR	3 cut(s)	1021, 1033, 1153
BstC8I	GCNNGC	8 cut(s)	29, 153, 263, 536, 787, 971, 1175, 1651
BstDEI	CTNAG	6 cut(s)	194, 266, 624, 926, 1505, 1941
BstDSI	CCRYGG	2 cut(s)	35, 82
BstF5I	GGATG	5 cut(s)	688, 1720, 1732, 1756, 1771
BstH2I	RGCGCY	5 cut(s)	434, 596, 970, 1647, 1863
BstKTI	GATC	8 cut(s)	315, 400, 509, 608, 613, 635, 666, 2005
BstMAI	GTCTC	5 cut(s)	351, 484, 1288, 1946, 1980
BstMBI	GATC	8 cut(s)	312, 397, 506, 605, 610, 632, 663, 2002
BstMCI	CGRYCG	2 cut(s)	315, 1937
BstNI	CCWGG	3 cut(s)	983, 1045, 1829
BstSCI	CCNGG	6 cut(s)	595, 600, 601, 981, 1043, 1827
BstSFI	CTRYAG	2 cut(s)	172, 1072
BstV1I	GCAGC	2 cut(s)	846, 1086
BstV2I	GAAGAC	7 cut(s)	1099, 1117, 1302, 1428, 1550, 1613, 1629
BstX2I	RGATCY	2 cut(s)	397, 610
BstYI	RGATCY	2 cut(s)	397, 610
BstZI	CGGCCG	1 cut(s)	1934
Bsu36I	CCTNAGG	1 cut(s)	926
BsuRI	GGCC	8 cut(s)	87, 155, 600, 617, 644, 1139, 1936, 2026
BtgI	CCRYGG	2 cut(s)	35, 82
BtgZI	GCGATG	2 cut(s)	389, 783
BtrI	CACGTC	2 cut(s)	589, 679
BtsCI	GGATG	5 cut(s)	688, 1720, 1732, 1756, 1771
BtsIMutI	CAGTG	1 cut(s)	1239
Cac8I	GCNNGC	8 cut(s)	29, 153, 263, 536, 787, 971, 1175, 1651
CciNI	GCGGCCGC	1 cut(s)	1934
Cfr10I	RCCGGY	3 cut(s)	151, 640, 969
Cfr13I	GGNCC	9 cut(s)	86, 154, 292, 599, 616, 922, 1024, 1036, 1825
Cfr9I	CCCGGG	1 cut(s)	601
CseI	GACGC	7 cut(s)	99, 207, 218, 230, 550, 554, 1547
CsiI	ACCWGGT	1 cut(s)	1827
Csp6I	GTAC	2 cut(s)	997, 1230
CviAII	CATG	3 cut(s)	1291, 1586, 1744
CviQI	GTAC	2 cut(s)	997, 1230
DdeI	CTNAG	6 cut(s)	194, 266, 624, 926, 1505, 1941
DinI	GGCGCC	2 cut(s)	594, 1645
DpnI	GATC	8 cut(s)	314, 399, 508, 607, 612, 634, 665, 2004
DpnII	GATC	8 cut(s)	312, 397, 506, 605, 610, 632, 663, 2002
DrdI	GACNNNNNNGTC	2 cut(s)	716, 1058
DseDI	GACNNNNNNGTC	2 cut(s)	716, 1058
EaeI	YGGCCR	1 cut(s)	1934
EagI	CGGCCG	1 cut(s)	1934
Eam1104I	CTCTTC	7 cut(s)	794, 837, 1389, 1460, 1655, 1752, 1885
EarI	CTCTTC	7 cut(s)	794, 837, 1389, 1460, 1655, 1752, 1885
EciI	GGCGGA	8 cut(s)	133, 272, 284, 363, 429, 637, 1581, 2015
Ecl136II	GAGCTC	2 cut(s)	256, 280
EclXI	CGGCCG	1 cut(s)	1934
Eco24I	GRGCYC	3 cut(s)	258, 282, 849
Eco31I	GGTCTC	2 cut(s)	351, 1288
Eco32I	GATATC	1 cut(s)	1264
Eco47I	GGWCC	5 cut(s)	292, 922, 1024, 1036, 1825
Eco47III	AGCGCT	1 cut(s)	1861
Eco52I	CGGCCG	1 cut(s)	1934
Eco53kI	GAGCTC	2 cut(s)	256, 280
Eco57I	CTGAAG	2 cut(s)	1093, 1649
Eco72I	CACGTG	3 cut(s)	1021, 1033, 1153
Eco81I	CCTNAGG	1 cut(s)	926
Eco88I	CYCGRG	2 cut(s)	601, 848
EcoICRI	GAGCTC	2 cut(s)	256, 280
EcoO109I	RGGNCCY	1 cut(s)	922
EcoRII	CCWGG	3 cut(s)	981, 1043, 1827
EcoRV	GATATC	1 cut(s)	1264
EcoT22I	ATGCAT	1 cut(s)	1351
EcoT38I	GRGCYC	3 cut(s)	258, 282, 849
EgeI	GGCGCC	2 cut(s)	594, 1645
EheI	GGCGCC	2 cut(s)	594, 1645
Esp3I	CGTCTC	2 cut(s)	484, 1946
FaeI	CATG	3 cut(s)	1294, 1589, 1747
FaiI	YATR	4 cut(s)	1253, 1292, 1587, 1745
FaqI	GGGAC	3 cut(s)	55, 113, 191
FatI	CATG	3 cut(s)	1290, 1585, 1743
FauI	CCCGC	3 cut(s)	880, 1228, 1689
FblI	GTMKAC	4 cut(s)	703, 1062, 1475, 1536
FokI	GGATG	5 cut(s)	695, 1727, 1739, 1763, 1778
FriOI	GRGCYC	3 cut(s)	258, 282, 849
FspBI	CTAG	4 cut(s)	6, 786, 1163, 1863
GsaI	CCCAGC	3 cut(s)	100, 622, 1302
HaeII	RGCGCY	5 cut(s)	434, 596, 970, 1647, 1863
HaeIII	GGCC	8 cut(s)	87, 155, 600, 617, 644, 1139, 1936, 2026
HgaI	GACGC	7 cut(s)	99, 207, 218, 230, 550, 554, 1547
Hin1I	GRCGYC	5 cut(s)	210, 561, 593, 811, 1644
Hin1II	CATG	3 cut(s)	1294, 1589, 1747
HincII	GTYRAC	3 cut(s)	250, 704, 1476
HindII	GTYRAC	3 cut(s)	250, 704, 1476
HphI	GGTGA	7 cut(s)	346, 760, 869, 1423, 1450, 1615, 1861
Hpy166II	GTNNAC	8 cut(s)	76, 250, 704, 1024, 1063, 1331, 1476, 1537
Hpy188III	TCNNGA	5 cut(s)	126, 568, 1163, 1481, 1657
Hpy8I	GTNNAC	8 cut(s)	76, 250, 704, 1024, 1063, 1331, 1476, 1537
HpyCH4III	ACNGT	4 cut(s)	36, 1234, 1375, 1438
HpyCH4V	TGCA	6 cut(s)	775, 1074, 1349, 1585, 1743, 2018
HpyF3I	CTNAG	6 cut(s)	194, 266, 624, 926, 1505, 1941
Hsp92I	GRCGYC	5 cut(s)	210, 561, 593, 811, 1644
Hsp92II	CATG	3 cut(s)	1294, 1589, 1747
KasI	GGCGCC	2 cut(s)	592, 1643
KroI	GCCGGC	2 cut(s)	151, 969
KroNI	GCCGGC	2 cut(s)	153, 971
Kzo9I	GATC	8 cut(s)	312, 397, 506, 605, 610, 632, 663, 2002
LguI	GCTCTTC	1 cut(s)	837
LmnI	GCTCC	9 cut(s)	52, 115, 137, 261, 277, 285, 363, 959, 978
Lsp1109I	GCAGC	2 cut(s)	846, 1086
LweI	GCATC	1 cut(s)	1420
MabI	ACCWGGT	1 cut(s)	1827
MaeI	CTAG	4 cut(s)	6, 786, 1163, 1863
MaeIII	GTNAC	2 cut(s)	987, 1849
MalI	GATC	8 cut(s)	314, 399, 508, 607, 612, 634, 665, 2004
MbiI	CCGCTC	2 cut(s)	939, 1905
MboI	GATC	8 cut(s)	312, 397, 506, 605, 610, 632, 663, 2002
MflI	RGATCY	2 cut(s)	397, 610
MhlI	GDGCHC	3 cut(s)	258, 282, 849
MluCI	AATT	1 cut(s)	523
Mly113I	GGCGCC	2 cut(s)	593, 1644
MlyI	GAGTC	8 cut(s)	95, 335, 527, 995, 1265, 1471, 1568, 1846
MmeI	TCCRAC	4 cut(s)	93, 303, 1239, 1692
Mph1103I	ATGCAT	1 cut(s)	1351
MroNI	GCCGGC	2 cut(s)	151, 969
MseI	TTAA	3 cut(s)	891, 900, 1554
MspA1I	CMGCKG	3 cut(s)	96, 171, 837
MspR9I	CCNGG	6 cut(s)	597, 602, 603, 983, 1045, 1829
MvaI	CCWGG	3 cut(s)	983, 1045, 1829
NaeI	GCCGGC	2 cut(s)	153, 971
NarI	GGCGCC	2 cut(s)	593, 1644
NciI	CCSGG	3 cut(s)	597, 602, 603
NdeII	GATC	8 cut(s)	312, 397, 506, 605, 610, 632, 663, 2002
NgoMIV	GCCGGC	2 cut(s)	151, 969
NheI	GCTAGC	1 cut(s)	785
NlaIII	CATG	3 cut(s)	1294, 1589, 1747
NlaIV	GGNNCC	6 cut(s)	88, 594, 955, 980, 1339, 1645
NmeAIII	GCCGAG	2 cut(s)	761, 930
NmuCI	GTSAC	2 cut(s)	987, 1849
NotI	GCGGCCGC	1 cut(s)	1934
NsiI	ATGCAT	1 cut(s)	1351
PauI	GCGCGC	1 cut(s)	27
PciSI	GCTCTTC	1 cut(s)	837
PdiI	GCCGGC	2 cut(s)	153, 971
PfeI	GAWTC	2 cut(s)	370, 485
PflFI	GACNNNGTC	2 cut(s)	104, 476
PflMI	CCANNNNNTGG	1 cut(s)	96
Ple19I	CGATCG	1 cut(s)	315
PleI	GAGTC	8 cut(s)	95, 334, 526, 994, 1264, 1471, 1567, 1846
PluTI	GGCGCC	2 cut(s)	596, 1647
PmaCI	CACGTG	3 cut(s)	1021, 1033, 1153
PmlI	CACGTG	3 cut(s)	1021, 1033, 1153
PpsI	GAGTC	8 cut(s)	95, 334, 526, 994, 1264, 1471, 1567, 1846
Ppu21I	YACGTR	3 cut(s)	1021, 1033, 1153
PpuMI	RGGWCCY	1 cut(s)	922
Psp124BI	GAGCTC	2 cut(s)	258, 282
Psp5II	RGGWCCY	1 cut(s)	922
Psp6I	CCWGG	3 cut(s)	981, 1043, 1827
PspCI	CACGTG	3 cut(s)	1021, 1033, 1153
PspFI	CCCAGC	3 cut(s)	96, 618, 1298
PspGI	CCWGG	3 cut(s)	981, 1043, 1827
PspN4I	GGNNCC	6 cut(s)	88, 594, 955, 980, 1339, 1645
PspPI	GGNCC	9 cut(s)	86, 154, 292, 599, 616, 922, 1024, 1036, 1825
PspPPI	RGGWCCY	1 cut(s)	922
PsrI	GAACNNNNNNTAC	2 cut(s)	1321, 1353
PstI	CTGCAG	1 cut(s)	1076
PsuI	RGATCY	2 cut(s)	397, 610
PsyI	GACNNNGTC	2 cut(s)	104, 476
PteI	GCGCGC	1 cut(s)	27
PvuI	CGATCG	1 cut(s)	315
PvuII	CAGCTG	2 cut(s)	96, 171
RsaI	GTAC	2 cut(s)	998, 1231
RsaNI	GTAC	2 cut(s)	997, 1230
SacI	GAGCTC	2 cut(s)	258, 282
SalI	GTCGAC	2 cut(s)	702, 1474
SapI	GCTCTTC	1 cut(s)	837
SaqAI	TTAA	3 cut(s)	891, 900, 1554
Sau3AI	GATC	8 cut(s)	312, 397, 506, 605, 610, 632, 663, 2002
Sau96I	GGNCC	9 cut(s)	86, 154, 292, 599, 616, 922, 1024, 1036, 1825
SchI	GAGTC	8 cut(s)	95, 335, 527, 995, 1265, 1471, 1568, 1846
ScrFI	CCNGG	6 cut(s)	597, 602, 603, 983, 1045, 1829
SduI	GDGCHC	3 cut(s)	258, 282, 849
SexAI	ACCWGGT	1 cut(s)	1827
SfaNI	GCATC	1 cut(s)	1420
SfcI	CTRYAG	2 cut(s)	172, 1072
SfoI	GGCGCC	2 cut(s)	594, 1645
SinI	GGWCC	5 cut(s)	292, 922, 1024, 1036, 1825
SmaI	CCCGGG	1 cut(s)	603
SmlI	CTYRAG	2 cut(s)	905, 1479
SmoI	CTYRAG	2 cut(s)	905, 1479
Sse9I	AATT	1 cut(s)	523
SspDI	GGCGCC	2 cut(s)	592, 1643
SspMI	CTAG	4 cut(s)	6, 786, 1163, 1863
SstI	GAGCTC	2 cut(s)	258, 282
StyD4I	CCNGG	6 cut(s)	595, 600, 601, 981, 1043, 1827
TaaI	ACNGT	4 cut(s)	36, 1234, 1375, 1438
TasI	AATT	1 cut(s)	523
TatI	WGTACW	1 cut(s)	1229
TfiI	GAWTC	2 cut(s)	370, 485
Tru1I	TTAA	3 cut(s)	891, 900, 1554
Tru9I	TTAA	3 cut(s)	891, 900, 1554
TscAI	CASTG	1 cut(s)	1239
TseFI	GTSAC	2 cut(s)	987, 1849
TseI	GCWGC	2 cut(s)	834, 1074
Tsp45I	GTSAC	2 cut(s)	987, 1849
TspDTI	ATGAA	3 cut(s)	1208, 1682, 1767
TspGWI	ACGGA	4 cut(s)	94, 946, 1625, 1838
TspMI	CCCGGG	1 cut(s)	601
TspRI	CASTG	1 cut(s)	1239
Tth111I	GACNNNGTC	2 cut(s)	104, 476
Van91I	CCANNNNNTGG	1 cut(s)	96
VpaK11BI	GGWCC	5 cut(s)	292, 922, 1024, 1036, 1825
XbaI	TCTAGA	1 cut(s)	1162
XmaI	CCCGGG	1 cut(s)	601
XmiI	GTMKAC	4 cut(s)	703, 1062, 1475, 1536
XspI	CTAG	4 cut(s)	6, 786, 1163, 1863
ZraI	GACGTC	1 cut(s)	812
Zsp2I	ATGCAT	1 cut(s)	1351

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.