Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0025164.1

Orthogroup ID

OG0006248

Physical Location & Seq

Genomic Coordinates Reverse (-)

2 .. 3199

Gene Structure 3198 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0025164.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1544 bp

atggctagtagggaacacgaaacgagcgcgcaaccgtggggcacgttagaggagctcttgctggtgtccgccgtgaaccgtcacggcacgaagcgctgggactccgtcgccaaggaggttaagtcccggagctccacgacgacaacggcggtgttcactgctcagaactgtagggacaagttcgacgacctcaaacgccgcttcgtcgtctcgcggcaaaacgacgccgaatcgcgaagcggcgacgacgacgggctggcgtttatggttgacgagctccgcaggctccgagtcgaggagctccgccgcgaggtccgccgtcgcgacgtttcgatcgtgtcgttggagttgaaggtgaagaagatggaggaggacagagaccggagcttgaaggcggagcggccggctccggtgaaggatctccatggcgacggtggaggaggagagcaatcggagttgccggagaaactggccggaaaaccaaactccggcagagacttcgtgtccgattcctccgagcgcgagaaccgatccttcaacgagtccaattccacaagccagagaagcgaggcgaaagcaaacggcgtcgtggagaaaaaaagggatgcggacgcggagcccggcccggagaggaaccaaccagatccggtccagaccgaaacccgatccgaaccggcctccgccaacggtaaagtgatcgacgacgacgtggacgataaaaacgatcgccaaggcggaggaggagcagagccgacaacgacgggtcgacccggcgagtcgaacgagttgtcggggtcgaaacgggtggtggtaaaggaagtgaggaagcagaacagcgatgaatcacaaaggtacaagaacctgattagggaacacgtggacctcaaggtggtccaatccaggctcgagaaaggggcctacaacgactgcacccacaagttcttccgcgacctcctcctcgtattcagcaacgccgtcgttttcttccgcaagaccgcgccggaacacgtggcggctctagagctacgctcgctggtgttgaaggaaatgaacgaccagctaccgagacctagatccgccgtgagcacagtgaagcccaagcccaatgtagagtccgatatcactactactactacttccatgagacccagcaagtcgtcttcgatcgttgtgtgcggtaaacgtggttccatcaatgcattatcggaaaacaagaaaggaattgttagaaaggtagaggttgaagagaaagaagcgaaggtgaaggtgaatgggaagaaggttgaagacagtgcaccagttaaggtggaggacaagggtgtgaggaagagaaggtcggctcaggaaagaaggggagagagaaggtcgaggacgacgacaacgagtaacagcaagaatgtagaagcgaagacaaagcatgagtccggcggaaatgaggtgagtatgcgtgatggtttggaggcagtgaagacggagaagaaagaagacgtgaagaagaagcaaggtgcggcgagctttttgaagagaatgaagcagaatggtag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain Myb_DNA-binding

Protein Analysis

514

Amino Acids

57.39

Weight (kDa)

9.52

Isoelectric Point (pI)

54.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006248)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44430 AT3G60110
fragaria_vesca	FvH4_3g44130 FvH4_3g44130 FvH4_3g44130
malus_domestica	MD03G1017000.v1.1 MD11G1017600.v1.1 MD11G1018000.v1.1 MD11G1018200.v1.1
prunus_persica	Prupe.6G015400_v2.0.a1
pyrus_communis	pycom03g01460 pycom03g01470 pycom11g01250 pycom11g01320
rosa_chinensis	RchiOBHm_Chr5g0080461
rosa_laevigata	RLG00000036858
rosa_multiflora	Rmu_co8095392.1_g000001 Rmu_sc0020711.1_g000001 Rmu_sc0025164.1_g000001
rosa_roxburghii	Rroxscaffold_1G00002940
rosa_rugosa	Rorug05G0469000 Rorug05G0469100
rosa_samantha	Rh5AG522700 Rh5BG544300 Rh5CG567900 Rh5DG554600
rosa_wichuraiana	Rw0G023230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	400
AccI	GTMKAC	1 cut(s)	766
AccII	CGCG	9 cut(s)	29, 214, 235, 309, 324, 522, 614, 948, 998
AclWI	GGATC	5 cut(s)	426, 525, 638, 660, 1068
AcoI	YGGCCR	2 cut(s)	401, 471
AcvI	CACGTG	2 cut(s)	877, 1009
AcyI	GRCGYC	2 cut(s)	225, 585
AfaI	GTAC	1 cut(s)	854
AfeI	AGCGCT	1 cut(s)	95
AfiI	CCNNNNNNNGG	5 cut(s)	295, 310, 488, 868, 889
AflIII	ACRYGT	2 cut(s)	874, 1006
AgsI	TTSAA	7 cut(s)	352, 391, 538, 1042, 1244, 1286, 1522
AhdI	GACNNNNNGTC	1 cut(s)	502
AjiI	CACGTC	2 cut(s)	709, 1489
AjnI	CCWGG	1 cut(s)	899
AluBI	AGCT	8 cut(s)	55, 132, 277, 301, 387, 1024, 1060, 1515
AluI	AGCT	8 cut(s)	55, 132, 277, 301, 387, 1024, 1060, 1515
Alw21I	GWGCWC	6 cut(s)	57, 134, 279, 303, 1088, 1297
Alw26I	GTCTC	5 cut(s)	214, 372, 489, 1060, 1138
Alw44I	GTGCAC	1 cut(s)	1293
AlwI	GGATC	5 cut(s)	426, 525, 638, 660, 1068
Ama87I	CYCGRG	1 cut(s)	905
Aor51HI	AGCGCT	1 cut(s)	95
AoxI	GGCC	5 cut(s)	401, 471, 622, 675, 915
ApaLI	GTGCAC	1 cut(s)	1293
ArsI	GACNNNNNNTTYG	4 cut(s)	773, 805, 1406, 1438
AspLEI	GCGC	5 cut(s)	29, 31, 96, 522, 1000
AspS9I	GGNCC	6 cut(s)	313, 623, 649, 880, 892, 915
AsuC2I	CCSGG	4 cut(s)	127, 621, 626, 771
AsuHPI	GGTGA	5 cut(s)	367, 424, 1273, 1279, 1450
AvaI	CYCGRG	1 cut(s)	905
AvaII	GGWCC	4 cut(s)	313, 649, 880, 892
BaeGI	GKGCMC	2 cut(s)	44, 1297
BanII	GRGCYC	5 cut(s)	57, 134, 279, 303, 621
BbrPI	CACGTG	2 cut(s)	877, 1009
BbsI	GAAGAC	5 cut(s)	1152, 1293, 1415, 1475, 1491
Bbv12I	GWGCWC	6 cut(s)	57, 134, 279, 303, 1088, 1297
BccI	CCATC	3 cut(s)	358, 1199, 1445
BceAI	ACGGC	7 cut(s)	56, 100, 162, 303, 598, 959, 1064
BcgI	CGANNNNNNTGC	4 cut(s)	481, 515, 958, 992
BciT130I	CCWGG	1 cut(s)	901
BcnI	CCSGG	4 cut(s)	127, 621, 626, 771
BcoDI	GTCTC	5 cut(s)	214, 372, 489, 1060, 1138
BfaI	CTAG	3 cut(s)	6, 1019, 1071
BfmI	CTRYAG	1 cut(s)	169
BfoI	RGCGCY	1 cut(s)	97
BisI	GCNGC	7 cut(s)	199, 215, 241, 307, 401, 1014, 1509
BlsI	GCNGC	7 cut(s)	200, 216, 242, 308, 402, 1015, 1510
Bme1390I	CCNGG	5 cut(s)	127, 621, 626, 771, 901
Bme18I	GGWCC	4 cut(s)	313, 649, 880, 892
BmeRI	GACNNNNNGTC	1 cut(s)	502
BmeT110I	CYCGRG	1 cut(s)	905
BmgBI	CACGTC	2 cut(s)	709, 1489
BmgT120I	GGNCC	6 cut(s)	313, 623, 649, 880, 892, 915
BmiI	GGNNCC	6 cut(s)	287, 408, 618, 635, 916, 1189
BmrFI	CCNGG	5 cut(s)	127, 621, 626, 771, 901
BmsI	GCATC	1 cut(s)	595
BpiI	GAAGAC	5 cut(s)	1152, 1293, 1415, 1475, 1491
BplI	GAGNNNNNCTC	2 cut(s)	1013, 1045
Bpu10I	CCTNAGC	1 cut(s)	1341
BpuEI	CTTGAG	1 cut(s)	869
BpuMI	CCSGG	4 cut(s)	127, 621, 626, 771
BsaAI	YACGTR	2 cut(s)	877, 1009
BsaHI	GRCGYC	2 cut(s)	225, 585
BsaI	GGTCTC	3 cut(s)	372, 1060, 1138
BsaJI	CCNNGG	4 cut(s)	35, 111, 424, 730
BsaWI	WCCGGW	3 cut(s)	381, 409, 646
BsaXI	ACNNNNNCTCC	2 cut(s)	107, 137
Bsc4I	CCNNNNNNNGG	5 cut(s)	295, 310, 488, 868, 889
Bse118I	RCCGGY	2 cut(s)	403, 673
Bse1I	ACTGG	2 cut(s)	474, 1298
BseBI	CCWGG	1 cut(s)	901
BseDI	CCNNGG	4 cut(s)	35, 111, 424, 730
BseGI	GGATG	1 cut(s)	610
BseLI	CCNNNNNNNGG	5 cut(s)	295, 310, 488, 868, 889
BseMII	CTCAG	2 cut(s)	176, 1355
BseNI	ACTGG	2 cut(s)	474, 1298
BsePI	GCGCGC	1 cut(s)	27
BseRI	GAGGAG	9 cut(s)	65, 311, 383, 453, 456, 753, 756, 944, 947
BseSI	GKGCMC	2 cut(s)	44, 1297
BseX3I	CGGCCG	1 cut(s)	401
BseYI	CCCAGC	2 cut(s)	96, 1148
BsgI	GTGCAG	1 cut(s)	913
Bsh1236I	CGCG	9 cut(s)	29, 214, 235, 309, 324, 522, 614, 948, 998
Bsh1285I	CGRYCG	4 cut(s)	336, 404, 727, 1167
BshFI	GGCC	5 cut(s)	403, 473, 624, 677, 917
BsiEI	CGRYCG	4 cut(s)	336, 404, 727, 1167
BsiHKAI	GWGCWC	6 cut(s)	57, 134, 279, 303, 1088, 1297
BsiHKCI	CYCGRG	1 cut(s)	905
BslFI	GGGAC	3 cut(s)	109, 113, 188
BslI	CCNNNNNNNGG	5 cut(s)	295, 310, 488, 868, 889
BsmAI	GTCTC	5 cut(s)	214, 372, 489, 1060, 1138
BsmBI	CGTCTC	1 cut(s)	214
BsmFI	GGGAC	3 cut(s)	109, 113, 188
BsnI	GGCC	5 cut(s)	403, 473, 624, 677, 917
Bso31I	GGTCTC	3 cut(s)	372, 1060, 1138
BsoBI	CYCGRG	1 cut(s)	905
Bsp1286I	GDGCHC	8 cut(s)	44, 57, 134, 279, 303, 621, 1088, 1297
Bsp143I	GATC	9 cut(s)	333, 418, 530, 643, 665, 696, 724, 1073, 1164
Bsp19I	CCATGG	1 cut(s)	424
Bsp68I	TCGCGA	2 cut(s)	235, 324
BspANI	GGCC	5 cut(s)	403, 473, 624, 677, 917
BspCNI	CTCAG	2 cut(s)	175, 1354
BspFNI	CGCG	9 cut(s)	29, 214, 235, 309, 324, 522, 614, 948, 998
BspLI	GGNNCC	6 cut(s)	287, 408, 618, 635, 916, 1189
BspPI	GGATC	5 cut(s)	426, 525, 638, 660, 1068
BspTNI	GGTCTC	3 cut(s)	372, 1060, 1138
BsrBI	CCGCTC	1 cut(s)	400
BsrFI	RCCGGY	2 cut(s)	403, 673
BsrI	ACTGG	2 cut(s)	474, 1298
BssAI	RCCGGY	2 cut(s)	403, 673
BssECI	CCNNGG	4 cut(s)	35, 111, 424, 730
BssHII	GCGCGC	1 cut(s)	27
BssMI	GATC	9 cut(s)	333, 418, 530, 643, 665, 696, 724, 1073, 1164
BssNI	GRCGYC	2 cut(s)	225, 585
BssT1I	CCWWGG	3 cut(s)	111, 424, 730
Bst2UI	CCWGG	1 cut(s)	901
Bst4CI	ACNGT	7 cut(s)	36, 80, 170, 434, 689, 1090, 1292
Bst6I	CTCTTC	3 cut(s)	1239, 1322, 1517
BstACI	GRCGYC	2 cut(s)	225, 585
BstBAI	YACGTR	2 cut(s)	877, 1009
BstC8I	GCNNGC	6 cut(s)	29, 258, 284, 405, 1031, 1513
BstDEI	CTNAG	2 cut(s)	162, 1341
BstDSI	CCRYGG	2 cut(s)	35, 424
BstF5I	GGATG	1 cut(s)	610
BstFNI	CGCG	9 cut(s)	29, 214, 235, 309, 324, 522, 614, 948, 998
BstH2I	RGCGCY	1 cut(s)	97
BstHHI	GCGC	5 cut(s)	29, 31, 96, 522, 1000
BstKTI	GATC	9 cut(s)	336, 421, 533, 646, 668, 699, 727, 1076, 1167
BstMAI	GTCTC	5 cut(s)	214, 372, 489, 1060, 1138
BstMBI	GATC	9 cut(s)	333, 418, 530, 643, 665, 696, 724, 1073, 1164
BstMCI	CGRYCG	4 cut(s)	336, 404, 727, 1167
BstMWI	GCNNNNNNNGC	5 cut(s)	93, 283, 315, 564, 1030
BstNI	CCWGG	1 cut(s)	901
BstSCI	CCNGG	5 cut(s)	125, 619, 624, 769, 899
BstSFI	CTRYAG	1 cut(s)	169
BstSLI	GKGCMC	2 cut(s)	44, 1297
BstUI	CGCG	9 cut(s)	29, 214, 235, 309, 324, 522, 614, 948, 998
BstV2I	GAAGAC	5 cut(s)	1152, 1293, 1415, 1475, 1491
BstX2I	RGATCY	3 cut(s)	418, 643, 1073
BstYI	RGATCY	3 cut(s)	418, 643, 1073
BstZI	CGGCCG	1 cut(s)	401
BsuRI	GGCC	5 cut(s)	403, 473, 624, 677, 917
BtgI	CCRYGG	2 cut(s)	35, 424
BtgZI	GCGATG	1 cut(s)	852
BtrI	CACGTC	2 cut(s)	709, 1489
BtsCI	GGATG	1 cut(s)	610
BtsI	GCAGTG	2 cut(s)	156, 1470
BtsIMutI	CAGTG	4 cut(s)	156, 1095, 1297, 1470
BtuMI	TCGCGA	2 cut(s)	235, 324
Cac8I	GCNNGC	6 cut(s)	29, 258, 284, 405, 1031, 1513
CfoI	GCGC	5 cut(s)	29, 31, 96, 522, 1000
Cfr10I	RCCGGY	2 cut(s)	403, 673
Cfr13I	GGNCC	6 cut(s)	313, 623, 649, 880, 892, 915
CseI	GACGC	3 cut(s)	233, 574, 620
Csp6I	GTAC	1 cut(s)	853
CviAII	CATG	3 cut(s)	425, 1141, 1418
CviQI	GTAC	1 cut(s)	853
DdeI	CTNAG	2 cut(s)	162, 1341
DpnI	GATC	9 cut(s)	335, 420, 532, 645, 667, 698, 726, 1075, 1166
DpnII	GATC	9 cut(s)	333, 418, 530, 643, 665, 696, 724, 1073, 1164
DriI	GACNNNNNGTC	1 cut(s)	502
EaeI	YGGCCR	2 cut(s)	401, 471
EagI	CGGCCG	1 cut(s)	401
Eam1104I	CTCTTC	3 cut(s)	1239, 1322, 1517
Eam1105I	GACNNNNNGTC	1 cut(s)	502
EarI	CTCTTC	3 cut(s)	1239, 1322, 1517
EciI	GGCGGA	8 cut(s)	58, 293, 305, 410, 670, 750, 1066, 1443
Ecl136II	GAGCTC	4 cut(s)	55, 132, 277, 301
EclXI	CGGCCG	1 cut(s)	401
Eco130I	CCWWGG	3 cut(s)	111, 424, 730
Eco24I	GRGCYC	5 cut(s)	57, 134, 279, 303, 621
Eco31I	GGTCTC	3 cut(s)	372, 1060, 1138
Eco32I	GATATC	1 cut(s)	1120
Eco47I	GGWCC	4 cut(s)	313, 649, 880, 892
Eco47III	AGCGCT	1 cut(s)	95
Eco52I	CGGCCG	1 cut(s)	401
Eco53kI	GAGCTC	4 cut(s)	55, 132, 277, 301
Eco72I	CACGTG	2 cut(s)	877, 1009
Eco88I	CYCGRG	1 cut(s)	905
EcoICRI	GAGCTC	4 cut(s)	55, 132, 277, 301
EcoO109I	RGGNCCY	1 cut(s)	915
EcoRII	CCWGG	1 cut(s)	899
EcoRV	GATATC	1 cut(s)	1120
EcoT14I	CCWWGG	3 cut(s)	111, 424, 730
EcoT22I	ATGCAT	1 cut(s)	1201
EcoT38I	GRGCYC	5 cut(s)	57, 134, 279, 303, 621
ErhI	CCWWGG	3 cut(s)	111, 424, 730
Esp3I	CGTCTC	1 cut(s)	214
FaeI	CATG	3 cut(s)	428, 1144, 1421
FaiI	YATR	5 cut(s)	266, 426, 1142, 1419, 1445
FaqI	GGGAC	3 cut(s)	109, 113, 188
FatI	CATG	3 cut(s)	424, 1140, 1417
FblI	GTMKAC	1 cut(s)	766
Fnu4HI	GCNGC	7 cut(s)	199, 215, 241, 307, 401, 1014, 1509
FokI	GGATG	1 cut(s)	617
FriOI	GRGCYC	5 cut(s)	57, 134, 279, 303, 621
Fsp4HI	GCNGC	7 cut(s)	199, 215, 241, 307, 401, 1014, 1509
FspBI	CTAG	3 cut(s)	6, 1019, 1071
GlaI	GCGC	5 cut(s)	28, 30, 95, 521, 999
GluI	GCNGC	7 cut(s)	199, 215, 241, 307, 401, 1014, 1509
GsaI	CCCAGC	2 cut(s)	100, 1152
HaeII	RGCGCY	1 cut(s)	97
HaeIII	GGCC	5 cut(s)	403, 473, 624, 677, 917
HgaI	GACGC	3 cut(s)	233, 574, 620
HhaI	GCGC	5 cut(s)	29, 31, 96, 522, 1000
Hin1I	GRCGYC	2 cut(s)	225, 585
Hin1II	CATG	3 cut(s)	428, 1144, 1421
Hin6I	GCGC	5 cut(s)	27, 29, 94, 520, 998
HinP1I	GCGC	5 cut(s)	27, 29, 94, 520, 998
HincII	GTYRAC	2 cut(s)	271, 767
HindII	GTYRAC	2 cut(s)	271, 767
HinfI	GANTC	9 cut(s)	101, 230, 291, 509, 542, 776, 842, 1112, 1421
HphI	GGTGA	5 cut(s)	367, 424, 1273, 1279, 1450
Hpy166II	GTNNAC	8 cut(s)	76, 156, 271, 712, 767, 880, 1181, 1295
Hpy188I	TCNGA	8 cut(s)	165, 290, 454, 508, 517, 670, 1117, 1207
Hpy188III	TCNNGA	6 cut(s)	234, 323, 652, 907, 1019, 1343
Hpy8I	GTNNAC	8 cut(s)	76, 156, 271, 712, 767, 880, 1181, 1295
HpyCH4III	ACNGT	7 cut(s)	36, 80, 170, 434, 689, 1090, 1292
HpyCH4IV	ACGT	7 cut(s)	44, 327, 708, 876, 1008, 1183, 1488
HpyCH4V	TGCA	3 cut(s)	930, 1199, 1295
HpyF10VI	GCNNNNNNNGC	5 cut(s)	93, 283, 315, 564, 1030
HpyF3I	CTNAG	2 cut(s)	162, 1341
HpySE526I	ACGT	7 cut(s)	44, 327, 708, 876, 1008, 1183, 1488
Hsp92I	GRCGYC	2 cut(s)	225, 585
Hsp92II	CATG	3 cut(s)	428, 1144, 1421
HspAI	GCGC	5 cut(s)	27, 29, 94, 520, 998
KroI	GCCGGC	1 cut(s)	403
KroNI	GCCGGC	1 cut(s)	405
Kzo9I	GATC	9 cut(s)	333, 418, 530, 643, 665, 696, 724, 1073, 1164
LweI	GCATC	1 cut(s)	595
MaeI	CTAG	3 cut(s)	6, 1019, 1071
MaeII	ACGT	7 cut(s)	44, 327, 708, 876, 1008, 1183, 1488
MaeIII	GTNAC	2 cut(s)	80, 1385
MalI	GATC	9 cut(s)	335, 420, 532, 645, 667, 698, 726, 1075, 1166
MbiI	CCGCTC	1 cut(s)	400
MboI	GATC	9 cut(s)	333, 418, 530, 643, 665, 696, 724, 1073, 1164
MflI	RGATCY	3 cut(s)	418, 643, 1073
MhlI	GDGCHC	8 cut(s)	44, 57, 134, 279, 303, 621, 1088, 1297
MluCI	AATT	2 cut(s)	547, 1221
MlyI	GAGTC	6 cut(s)	95, 300, 551, 785, 1121, 1430
MmeI	TCCRAC	1 cut(s)	324
Mph1103I	ATGCAT	1 cut(s)	1201
MroNI	GCCGGC	1 cut(s)	403
MseI	TTAA	2 cut(s)	120, 1302
MspR9I	CCNGG	5 cut(s)	127, 621, 626, 771, 901
MvaI	CCWGG	1 cut(s)	901
MvnI	CGCG	9 cut(s)	29, 214, 235, 309, 324, 522, 614, 948, 998
MwoI	GCNNNNNNNGC	5 cut(s)	93, 283, 315, 564, 1030
NaeI	GCCGGC	1 cut(s)	405
NciI	CCSGG	4 cut(s)	127, 621, 626, 771
NcoI	CCATGG	1 cut(s)	424
NdeII	GATC	9 cut(s)	333, 418, 530, 643, 665, 696, 724, 1073, 1164
NgoMIV	GCCGGC	1 cut(s)	403
NlaIII	CATG	3 cut(s)	428, 1144, 1421
NlaIV	GGNNCC	6 cut(s)	287, 408, 618, 635, 916, 1189
NmuCI	GTSAC	1 cut(s)	80
NruI	TCGCGA	2 cut(s)	235, 324
NsiI	ATGCAT	1 cut(s)	1201
PaeR7I	CTCGAG	1 cut(s)	905
PauI	GCGCGC	1 cut(s)	27
PcsI	WCGNNNNNNNCGW	7 cut(s)	333, 338, 705, 711, 720, 1373, 1379
PdiI	GCCGGC	1 cut(s)	405
PfeI	GAWTC	3 cut(s)	230, 509, 842
PflFI	GACNNNGTC	1 cut(s)	104
PfoI	TCCNGGA	1 cut(s)	125
PkrI	GCNGC	7 cut(s)	200, 216, 242, 308, 402, 1015, 1510
Ple19I	CGATCG	3 cut(s)	336, 727, 1167
PleI	GAGTC	6 cut(s)	95, 299, 550, 784, 1120, 1429
PmaCI	CACGTG	2 cut(s)	877, 1009
PmlI	CACGTG	2 cut(s)	877, 1009
PpsI	GAGTC	6 cut(s)	95, 299, 550, 784, 1120, 1429
Ppu21I	YACGTR	2 cut(s)	877, 1009
Psp124BI	GAGCTC	4 cut(s)	57, 134, 279, 303
Psp6I	CCWGG	1 cut(s)	899
PspCI	CACGTG	2 cut(s)	877, 1009
PspFI	CCCAGC	2 cut(s)	96, 1148
PspGI	CCWGG	1 cut(s)	899
PspN4I	GGNNCC	6 cut(s)	287, 408, 618, 635, 916, 1189
PspPI	GGNCC	6 cut(s)	313, 623, 649, 880, 892, 915
PsrI	GAACNNNNNNTAC	2 cut(s)	1171, 1203
PsuI	RGATCY	3 cut(s)	418, 643, 1073
PsyI	GACNNNGTC	1 cut(s)	104
PteI	GCGCGC	1 cut(s)	27
PvuI	CGATCG	3 cut(s)	336, 727, 1167
RruI	TCGCGA	2 cut(s)	235, 324
RsaI	GTAC	1 cut(s)	854
RsaNI	GTAC	1 cut(s)	853
SacI	GAGCTC	4 cut(s)	57, 134, 279, 303
SalI	GTCGAC	1 cut(s)	765
SaqAI	TTAA	2 cut(s)	120, 1302
SatI	GCNGC	7 cut(s)	199, 215, 241, 307, 401, 1014, 1509
Sau3AI	GATC	9 cut(s)	333, 418, 530, 643, 665, 696, 724, 1073, 1164
Sau96I	GGNCC	6 cut(s)	313, 623, 649, 880, 892, 915
SchI	GAGTC	6 cut(s)	95, 300, 551, 785, 1121, 1430
ScrFI	CCNGG	5 cut(s)	127, 621, 626, 771, 901
SduI	GDGCHC	8 cut(s)	44, 57, 134, 279, 303, 621, 1088, 1297
SfaNI	GCATC	1 cut(s)	595
SfcI	CTRYAG	1 cut(s)	169
Sfr274I	CTCGAG	1 cut(s)	905
SinI	GGWCC	4 cut(s)	313, 649, 880, 892
SlaI	CTCGAG	1 cut(s)	905
SmlI	CTYRAG	2 cut(s)	884, 905
SmoI	CTYRAG	2 cut(s)	884, 905
Sse9I	AATT	2 cut(s)	547, 1221
SspMI	CTAG	3 cut(s)	6, 1019, 1071
SstI	GAGCTC	4 cut(s)	57, 134, 279, 303
StyD4I	CCNGG	5 cut(s)	125, 619, 624, 769, 899
StyI	CCWWGG	3 cut(s)	111, 424, 730
TaaI	ACNGT	7 cut(s)	36, 80, 170, 434, 689, 1090, 1292
TaiI	ACGT	7 cut(s)	47, 330, 711, 879, 1011, 1186, 1491
TaqII	GACCGA	1 cut(s)	671
TasI	AATT	2 cut(s)	547, 1221
TauI	GCSGC	7 cut(s)	201, 217, 243, 309, 403, 1016, 1511
TfiI	GAWTC	3 cut(s)	230, 509, 842
Tru1I	TTAA	2 cut(s)	120, 1302
Tru9I	TTAA	2 cut(s)	120, 1302
TscAI	CASTG	4 cut(s)	163, 1095, 1297, 1470
TseFI	GTSAC	1 cut(s)	80
Tsp45I	GTSAC	1 cut(s)	80
TspDTI	ATGAA	3 cut(s)	855, 1064, 1544
TspGWI	ACGGA	2 cut(s)	94, 1487
TspRI	CASTG	4 cut(s)	163, 1095, 1297, 1470
Tth111I	GACNNNGTC	1 cut(s)	104
VneI	GTGCAC	1 cut(s)	1293
VpaK11BI	GGWCC	4 cut(s)	313, 649, 880, 892
XbaI	TCTAGA	1 cut(s)	1018
XcmI	CCANNNNNNNNNTGG	1 cut(s)	431
XhoI	CTCGAG	1 cut(s)	905
XmiI	GTMKAC	1 cut(s)	766
XspI	CTAG	3 cut(s)	6, 1019, 1071
Zsp2I	ATGCAT	1 cut(s)	1201

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.