Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5B

Orthogroup ID

OG0006248

Physical Location & Seq

Genomic Coordinates Reverse (-)

86699470 .. 86708090

Gene Structure 8621 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5BG544300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1548 bp

ATGGCTAGTAGGGAACACGAAACGAGCGCGCAACCGTGGGGCACGTTAGAGGAGCTCTTGCTGGTGTCCGCCGTGAACCGTCACGGCACGAAGCGCTGGGACTCCGTCGCCAAGGAGGTTAAGTCCCGGAGCTCCACGACGACAACGGCGGTGTTCACTGCTCAGAACTGTAGGGACAAGTTCGACGACCTCAAACGCCGCTTCGTCGTCTCGCGGCAAAACGACGCCGAATCGCGAAGCGGCGACGACGACGGGCTGGCGTTTATGGTTGACGAGCTCCGCAGGCTCCGAGTCGAGGAGCTCCGCCGCGAGGTCCGCCGTCGCGACGTTTCGATCGTGTCGTTGGAGTTGAAGGTGAAGAAGATGGAGGAGGACAGAGACCGGAGCTTGAAGGCGGAGCGGCCGGCTCCGGTGAAGGATCTCCATGGCGACGGTGGAGGAGGAGAGCAATCGGAGTTGCCGGAGAAACTGGCCGGAAAACCAAACTCCGGCAGAGATTTCGTGTCCGATTCCTCCGAGCGCGAGAACCGATCCTTCAACGAGTCCAATTCCACAAGCCAGAGAAGCGAGGCGAAAGCAAACGGCGTCGTGGAGAAAAAAAGGGATGCGGACGCGGAGCCCGGCCCGGAGAGGAACCAACCAGATCCGGTCCAGACCGAAACCCGATCCGAACCGGCCTCCGCCAACGGTAAAGTGATCGACGACGACGTGGACGATAAAAACGATCGCCAAGGCGGAGGAGGAGCAGAGCCGACAACGACGGGTCGACCCGGCGAGTCGAACGAGTTGTCGGGGTCGAAACGGGTGGTGGTAAAGGAAGTGAGGAAGCAGAACAGCGATGTTCAAAGCTCGGCTAGCTTGACGAGGAGGAGGAAACGACGTCGTAAAGGTGGCGATAGTAGCAGCGGCGAAGAGCCCGAGGGTGGTGAGGAAGTTTCTCCCGCCACCACGAAACGGGTTAAGCTCGTTAAACTTGAGCCGTTGGTCAAGGTCCTCAGGATCGTCCGCTCGCATCGGCTCGGCTCCGTATTCCAGCGCCGGCTTCGGAGCCAGGAATCACAAAGGTACAAGAACCTGATTAGGGAACACGTGGACCTCAAGGTGGTCCAATCCAGGCTCGAGAAAGGGGCCTACAACGACTGCACCCACAAGTTCTTCCGCGACCTCCTCCTCGTATTCAGCAACGCCGTCGTTTTCTTCCGCAAGACCGCGCCGGAACACGTGGCGGCTCTAGAGCTACGCTCGCTGGTGTTGAAGGAAATGAACGACCAGCTACCGAGACCTAGACCCGCCGTGAGCACAGTGAAGCCCAAGCCCAATGTAGAGTCCGATATCACTACTACTACTACTTCCATGAGACCCAGCGAAAGAGAATCGGGGTATTACAAGAGGGGGATAGAGAAAAGCAGAGATGTATCGAACACTGCCACTTCCACAAAAACACCCAGAACCCCATTTCTAATGTCAAACTATACGATCGAGACCTGCACAGTTGAGACCAGTGATGGAGACAAGCTCAACAGAAGGTGTTCAAACCCAGAGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain Myb_DNA-binding

Protein Analysis

515

Amino Acids

57.86

Weight (kDa)

9.46

Isoelectric Point (pI)

65.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	11 - 45	1.9e-06	Myb-like DNA-binding domain
Bromodomain	PF00439	331 - 411	8.2e-09	Bromodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006248)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44430 AT3G60110
fragaria_vesca	FvH4_3g44130 FvH4_3g44130 FvH4_3g44130
malus_domestica	MD03G1017000.v1.1 MD11G1017600.v1.1 MD11G1018000.v1.1 MD11G1018200.v1.1
prunus_persica	Prupe.6G015400_v2.0.a1
pyrus_communis	pycom03g01460 pycom03g01470 pycom11g01250 pycom11g01320
rosa_chinensis	RchiOBHm_Chr5g0080461
rosa_laevigata	RLG00000036858
rosa_multiflora	Rmu_co8095392.1_g000001 Rmu_sc0020711.1_g000001 Rmu_sc0025164.1_g000001
rosa_roxburghii	Rroxscaffold_1G00002940
rosa_rugosa	Rorug05G0469000 Rorug05G0469100
rosa_samantha	Rh5AG522700 Rh5BG544300 Rh5CG567900 Rh5DG554600
rosa_wichuraiana	Rw0G023230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	883
Acc36I	ACCTGC	1 cut(s)	1493
AccBSI	CCGCTC	2 cut(s)	400, 1008
AccI	GTMKAC	1 cut(s)	766
AccII	CGCG	9 cut(s)	29, 214, 235, 309, 324, 522, 614, 1161, 1211
AclWI	GGATC	5 cut(s)	426, 525, 638, 660, 1007
AcoI	YGGCCR	2 cut(s)	401, 471
AcvI	CACGTG	2 cut(s)	1090, 1222
AcyI	GRCGYC	3 cut(s)	225, 585, 880
AfaI	GTAC	1 cut(s)	1067
AfeI	AGCGCT	1 cut(s)	95
AfiI	CCNNNNNNNGG	7 cut(s)	295, 310, 488, 923, 954, 1081, 1102
AflIII	ACRYGT	2 cut(s)	1087, 1219
AgsI	TTSAA	6 cut(s)	352, 391, 538, 845, 1255, 1533
AjiI	CACGTC	1 cut(s)	709
AjnI	CCWGG	2 cut(s)	1050, 1112
Alw21I	GWGCWC	5 cut(s)	57, 134, 279, 303, 1301
Alw26I	GTCTC	7 cut(s)	214, 372, 1273, 1351, 1475, 1490, 1503
AlwI	GGATC	5 cut(s)	426, 525, 638, 660, 1007
Ama87I	CYCGRG	2 cut(s)	917, 1118
Aor51HI	AGCGCT	1 cut(s)	95
AoxI	GGCC	5 cut(s)	401, 471, 622, 675, 1128
ApeKI	GCWGC	1 cut(s)	903
ArsI	GACNNNNNNTTYG	2 cut(s)	773, 805
Asp700I	GAANNNNTTC	1 cut(s)	1528
AspLEI	GCGC	6 cut(s)	29, 31, 96, 522, 1038, 1213
AspS9I	GGNCC	7 cut(s)	313, 623, 649, 991, 1093, 1105, 1128
AsuC2I	CCSGG	4 cut(s)	127, 621, 626, 771
AsuHPI	GGTGA	3 cut(s)	367, 424, 938
AsuNHI	GCTAGC	1 cut(s)	854
AvaI	CYCGRG	2 cut(s)	917, 1118
AvaII	GGWCC	5 cut(s)	313, 649, 991, 1093, 1105
AxyI	CCTNAGG	1 cut(s)	995
BaeGI	GKGCMC	1 cut(s)	44
BanII	GRGCYC	6 cut(s)	57, 134, 279, 303, 621, 918
BbrPI	CACGTG	2 cut(s)	1090, 1222
Bbv12I	GWGCWC	5 cut(s)	57, 134, 279, 303, 1301
BbvI	GCAGC	1 cut(s)	915
BccI	CCATC	2 cut(s)	358, 1499
BceAI	ACGGC	8 cut(s)	56, 100, 162, 303, 598, 964, 1172, 1277
BcgI	CGANNNNNNTGC	4 cut(s)	481, 515, 1171, 1205
BciT130I	CCWGG	2 cut(s)	1052, 1114
BcnI	CCSGG	4 cut(s)	127, 621, 626, 771
BcoDI	GTCTC	7 cut(s)	214, 372, 1273, 1351, 1475, 1490, 1503
BfaI	CTAG	4 cut(s)	6, 855, 1232, 1284
BfmI	CTRYAG	1 cut(s)	169
BfoI	RGCGCY	2 cut(s)	97, 1039
BfuAI	ACCTGC	1 cut(s)	1493
BisI	GCNGC	8 cut(s)	199, 215, 241, 307, 401, 904, 907, 1227
BlsI	GCNGC	8 cut(s)	200, 216, 242, 308, 402, 905, 908, 1228
Bme1390I	CCNGG	6 cut(s)	127, 621, 626, 771, 1052, 1114
Bme18I	GGWCC	5 cut(s)	313, 649, 991, 1093, 1105
BmeT110I	CYCGRG	2 cut(s)	917, 1118
BmgBI	CACGTC	1 cut(s)	709
BmgT120I	GGNCC	7 cut(s)	313, 623, 649, 991, 1093, 1105, 1128
BmiI	GGNNCC	7 cut(s)	287, 408, 618, 635, 1024, 1049, 1129
BmrFI	CCNGG	6 cut(s)	127, 621, 626, 771, 1052, 1114
BmsI	GCATC	2 cut(s)	595, 1021
BmtI	GCTAGC	1 cut(s)	858
BplI	GAGNNNNNCTC	4 cut(s)	1226, 1258, 1500, 1532
BpuEI	CTTGAG	2 cut(s)	995, 1082
BpuMI	CCSGG	4 cut(s)	127, 621, 626, 771
BsaAI	YACGTR	2 cut(s)	1090, 1222
BsaHI	GRCGYC	3 cut(s)	225, 585, 880
BsaI	GGTCTC	5 cut(s)	372, 1273, 1351, 1475, 1490
BsaJI	CCNNGG	5 cut(s)	35, 111, 424, 730, 918
BsaWI	WCCGGW	3 cut(s)	381, 409, 646
BsaXI	ACNNNNNCTCC	2 cut(s)	107, 137
Bsc4I	CCNNNNNNNGG	7 cut(s)	295, 310, 488, 923, 954, 1081, 1102
Bse118I	RCCGGY	3 cut(s)	403, 673, 1038
Bse1I	ACTGG	2 cut(s)	474, 1500
Bse21I	CCTNAGG	1 cut(s)	995
BseBI	CCWGG	2 cut(s)	1052, 1114
BseDI	CCNNGG	5 cut(s)	35, 111, 424, 730, 918
BseGI	GGATG	1 cut(s)	610
BseLI	CCNNNNNNNGG	7 cut(s)	295, 310, 488, 923, 954, 1081, 1102
BseMII	CTCAG	2 cut(s)	176, 1009
BseNI	ACTGG	2 cut(s)	474, 1500
BsePI	GCGCGC	1 cut(s)	27
BseSI	GKGCMC	1 cut(s)	44
BseX3I	CGGCCG	1 cut(s)	401
BseXI	GCAGC	1 cut(s)	915
BseYI	CCCAGC	2 cut(s)	96, 1361
BsgI	GTGCAG	2 cut(s)	1126, 1471
Bsh1236I	CGCG	9 cut(s)	29, 214, 235, 309, 324, 522, 614, 1161, 1211
Bsh1285I	CGRYCG	4 cut(s)	336, 404, 727, 1479
BshFI	GGCC	5 cut(s)	403, 473, 624, 677, 1130
BsiEI	CGRYCG	4 cut(s)	336, 404, 727, 1479
BsiHKAI	GWGCWC	5 cut(s)	57, 134, 279, 303, 1301
BsiHKCI	CYCGRG	2 cut(s)	917, 1118
BslFI	GGGAC	3 cut(s)	109, 113, 188
BslI	CCNNNNNNNGG	7 cut(s)	295, 310, 488, 923, 954, 1081, 1102
BsmAI	GTCTC	7 cut(s)	214, 372, 1273, 1351, 1475, 1490, 1503
BsmBI	CGTCTC	1 cut(s)	214
BsmFI	GGGAC	3 cut(s)	109, 113, 188
BsnI	GGCC	5 cut(s)	403, 473, 624, 677, 1130
Bso31I	GGTCTC	5 cut(s)	372, 1273, 1351, 1475, 1490
BsoBI	CYCGRG	2 cut(s)	917, 1118
Bsp1286I	GDGCHC	8 cut(s)	44, 57, 134, 279, 303, 621, 918, 1301
Bsp143I	GATC	9 cut(s)	333, 418, 530, 643, 665, 696, 724, 999, 1476
Bsp19I	CCATGG	1 cut(s)	424
Bsp68I	TCGCGA	2 cut(s)	235, 324
BspANI	GGCC	5 cut(s)	403, 473, 624, 677, 1130
BspCNI	CTCAG	2 cut(s)	175, 1008
BspFNI	CGCG	9 cut(s)	29, 214, 235, 309, 324, 522, 614, 1161, 1211
BspLI	GGNNCC	7 cut(s)	287, 408, 618, 635, 1024, 1049, 1129
BspMI	ACCTGC	1 cut(s)	1493
BspOI	GCTAGC	1 cut(s)	858
BspPI	GGATC	5 cut(s)	426, 525, 638, 660, 1007
BspQI	GCTCTTC	1 cut(s)	906
BspTNI	GGTCTC	5 cut(s)	372, 1273, 1351, 1475, 1490
BsrBI	CCGCTC	2 cut(s)	400, 1008
BsrFI	RCCGGY	3 cut(s)	403, 673, 1038
BsrI	ACTGG	2 cut(s)	474, 1500
BssAI	RCCGGY	3 cut(s)	403, 673, 1038
BssECI	CCNNGG	5 cut(s)	35, 111, 424, 730, 918
BssHII	GCGCGC	1 cut(s)	27
BssMI	GATC	9 cut(s)	333, 418, 530, 643, 665, 696, 724, 999, 1476
BssNI	GRCGYC	3 cut(s)	225, 585, 880
BssT1I	CCWWGG	3 cut(s)	111, 424, 730
Bst2UI	CCWGG	2 cut(s)	1052, 1114
Bst4CI	ACNGT	7 cut(s)	36, 80, 170, 434, 689, 1303, 1492
Bst6I	CTCTTC	1 cut(s)	906
BstACI	GRCGYC	3 cut(s)	225, 585, 880
BstBAI	YACGTR	2 cut(s)	1090, 1222
BstC8I	GCNNGC	8 cut(s)	29, 258, 284, 405, 856, 1010, 1040, 1244
BstDEI	CTNAG	2 cut(s)	162, 995
BstDSI	CCRYGG	2 cut(s)	35, 424
BstF5I	GGATG	1 cut(s)	610
BstFNI	CGCG	9 cut(s)	29, 214, 235, 309, 324, 522, 614, 1161, 1211
BstH2I	RGCGCY	2 cut(s)	97, 1039
BstHHI	GCGC	6 cut(s)	29, 31, 96, 522, 1038, 1213
BstKTI	GATC	9 cut(s)	336, 421, 533, 646, 668, 699, 727, 1002, 1479
BstMAI	GTCTC	7 cut(s)	214, 372, 1273, 1351, 1475, 1490, 1503
BstMBI	GATC	9 cut(s)	333, 418, 530, 643, 665, 696, 724, 999, 1476
BstMCI	CGRYCG	4 cut(s)	336, 404, 727, 1479
BstMWI	GCNNNNNNNGC	7 cut(s)	93, 283, 315, 564, 855, 900, 1243
BstNI	CCWGG	2 cut(s)	1052, 1114
BstSCI	CCNGG	6 cut(s)	125, 619, 624, 769, 1050, 1112
BstSFI	CTRYAG	1 cut(s)	169
BstSLI	GKGCMC	1 cut(s)	44
BstUI	CGCG	9 cut(s)	29, 214, 235, 309, 324, 522, 614, 1161, 1211
BstV1I	GCAGC	1 cut(s)	915
BstX2I	RGATCY	2 cut(s)	418, 643
BstYI	RGATCY	2 cut(s)	418, 643
BstZI	CGGCCG	1 cut(s)	401
Bsu36I	CCTNAGG	1 cut(s)	995
BsuRI	GGCC	5 cut(s)	403, 473, 624, 677, 1130
BtgI	CCRYGG	2 cut(s)	35, 424
BtgZI	GCGATG	1 cut(s)	852
BtrI	CACGTC	1 cut(s)	709
BtsCI	GGATG	1 cut(s)	610
BtsI	GCAGTG	2 cut(s)	156, 1422
BtsIMutI	CAGTG	4 cut(s)	156, 1308, 1422, 1507
BtuMI	TCGCGA	2 cut(s)	235, 324
BveI	ACCTGC	1 cut(s)	1493
Cac8I	GCNNGC	8 cut(s)	29, 258, 284, 405, 856, 1010, 1040, 1244
CfoI	GCGC	6 cut(s)	29, 31, 96, 522, 1038, 1213
Cfr10I	RCCGGY	3 cut(s)	403, 673, 1038
Cfr13I	GGNCC	7 cut(s)	313, 623, 649, 991, 1093, 1105, 1128
CseI	GACGC	3 cut(s)	233, 574, 620
Csp6I	GTAC	1 cut(s)	1066
CviAII	CATG	2 cut(s)	425, 1354
CviQI	GTAC	1 cut(s)	1066
DdeI	CTNAG	2 cut(s)	162, 995
DpnI	GATC	9 cut(s)	335, 420, 532, 645, 667, 698, 726, 1001, 1478
DpnII	GATC	9 cut(s)	333, 418, 530, 643, 665, 696, 724, 999, 1476
EaeI	YGGCCR	2 cut(s)	401, 471
EagI	CGGCCG	1 cut(s)	401
Eam1104I	CTCTTC	1 cut(s)	906
EarI	CTCTTC	1 cut(s)	906
EciI	GGCGGA	6 cut(s)	58, 293, 305, 410, 670, 750
Ecl136II	GAGCTC	4 cut(s)	55, 132, 277, 301
EclXI	CGGCCG	1 cut(s)	401
Eco130I	CCWWGG	3 cut(s)	111, 424, 730
Eco24I	GRGCYC	6 cut(s)	57, 134, 279, 303, 621, 918
Eco31I	GGTCTC	5 cut(s)	372, 1273, 1351, 1475, 1490
Eco32I	GATATC	1 cut(s)	1333
Eco47I	GGWCC	5 cut(s)	313, 649, 991, 1093, 1105
Eco47III	AGCGCT	1 cut(s)	95
Eco52I	CGGCCG	1 cut(s)	401
Eco53kI	GAGCTC	4 cut(s)	55, 132, 277, 301
Eco72I	CACGTG	2 cut(s)	1090, 1222
Eco81I	CCTNAGG	1 cut(s)	995
Eco88I	CYCGRG	2 cut(s)	917, 1118
EcoICRI	GAGCTC	4 cut(s)	55, 132, 277, 301
EcoO109I	RGGNCCY	2 cut(s)	991, 1128
EcoRII	CCWGG	2 cut(s)	1050, 1112
EcoRV	GATATC	1 cut(s)	1333
EcoT14I	CCWWGG	3 cut(s)	111, 424, 730
EcoT38I	GRGCYC	6 cut(s)	57, 134, 279, 303, 621, 918
ErhI	CCWWGG	3 cut(s)	111, 424, 730
Esp3I	CGTCTC	1 cut(s)	214
FaeI	CATG	2 cut(s)	428, 1357
FaiI	YATR	4 cut(s)	266, 426, 1355, 1473
FaqI	GGGAC	3 cut(s)	109, 113, 188
FatI	CATG	2 cut(s)	424, 1353
FauI	CCCGC	2 cut(s)	949, 1297
FblI	GTMKAC	1 cut(s)	766
Fnu4HI	GCNGC	8 cut(s)	199, 215, 241, 307, 401, 904, 907, 1227
FokI	GGATG	1 cut(s)	617
FriOI	GRGCYC	6 cut(s)	57, 134, 279, 303, 621, 918
Fsp4HI	GCNGC	8 cut(s)	199, 215, 241, 307, 401, 904, 907, 1227
FspBI	CTAG	4 cut(s)	6, 855, 1232, 1284
GlaI	GCGC	6 cut(s)	28, 30, 95, 521, 1037, 1212
GluI	GCNGC	8 cut(s)	199, 215, 241, 307, 401, 904, 907, 1227
GsaI	CCCAGC	2 cut(s)	100, 1365
HaeII	RGCGCY	2 cut(s)	97, 1039
HaeIII	GGCC	5 cut(s)	403, 473, 624, 677, 1130
HgaI	GACGC	3 cut(s)	233, 574, 620
HhaI	GCGC	6 cut(s)	29, 31, 96, 522, 1038, 1213
Hin1I	GRCGYC	3 cut(s)	225, 585, 880
Hin1II	CATG	2 cut(s)	428, 1357
Hin6I	GCGC	6 cut(s)	27, 29, 94, 520, 1036, 1211
HinP1I	GCGC	6 cut(s)	27, 29, 94, 520, 1036, 1211
HincII	GTYRAC	2 cut(s)	271, 767
HindII	GTYRAC	2 cut(s)	271, 767
HinfI	GANTC	9 cut(s)	101, 230, 291, 509, 542, 776, 1055, 1325, 1373
HphI	GGTGA	3 cut(s)	367, 424, 938
Hpy166II	GTNNAC	6 cut(s)	76, 156, 271, 712, 767, 1093
Hpy188I	TCNGA	8 cut(s)	165, 290, 454, 508, 517, 670, 1047, 1330
Hpy188III	TCNNGA	7 cut(s)	234, 323, 652, 997, 1120, 1232, 1480
Hpy8I	GTNNAC	6 cut(s)	76, 156, 271, 712, 767, 1093
HpyAV	CCTTC	6 cut(s)	346, 385, 409, 544, 1249, 1518
HpyCH4III	ACNGT	7 cut(s)	36, 80, 170, 434, 689, 1303, 1492
HpyCH4IV	ACGT	6 cut(s)	44, 327, 708, 880, 1089, 1221
HpyCH4V	TGCA	2 cut(s)	1143, 1488
HpyF10VI	GCNNNNNNNGC	7 cut(s)	93, 283, 315, 564, 855, 900, 1243
HpyF3I	CTNAG	2 cut(s)	162, 995
HpySE526I	ACGT	6 cut(s)	44, 327, 708, 880, 1089, 1221
Hsp92I	GRCGYC	3 cut(s)	225, 585, 880
Hsp92II	CATG	2 cut(s)	428, 1357
HspAI	GCGC	6 cut(s)	27, 29, 94, 520, 1036, 1211
KroI	GCCGGC	2 cut(s)	403, 1038
KroNI	GCCGGC	2 cut(s)	405, 1040
Kzo9I	GATC	9 cut(s)	333, 418, 530, 643, 665, 696, 724, 999, 1476
LguI	GCTCTTC	1 cut(s)	906
Lsp1109I	GCAGC	1 cut(s)	915
LweI	GCATC	2 cut(s)	595, 1021
MaeI	CTAG	4 cut(s)	6, 855, 1232, 1284
MaeII	ACGT	6 cut(s)	44, 327, 708, 880, 1089, 1221
MaeIII	GTNAC	1 cut(s)	80
MalI	GATC	9 cut(s)	335, 420, 532, 645, 667, 698, 726, 1001, 1478
MbiI	CCGCTC	2 cut(s)	400, 1008
MboI	GATC	9 cut(s)	333, 418, 530, 643, 665, 696, 724, 999, 1476
MboII	GAAGA	5 cut(s)	370, 373, 923, 1147, 1189
MflI	RGATCY	2 cut(s)	418, 643
MhlI	GDGCHC	8 cut(s)	44, 57, 134, 279, 303, 621, 918, 1301
MluCI	AATT	1 cut(s)	547
MlyI	GAGTC	5 cut(s)	95, 300, 551, 785, 1334
MmeI	TCCRAC	1 cut(s)	324
MroNI	GCCGGC	2 cut(s)	403, 1038
MroXI	GAANNNNTTC	1 cut(s)	1528
MseI	TTAA	3 cut(s)	120, 960, 969
MspA1I	CMGCKG	1 cut(s)	906
MspR9I	CCNGG	6 cut(s)	127, 621, 626, 771, 1052, 1114
MvaI	CCWGG	2 cut(s)	1052, 1114
MvnI	CGCG	9 cut(s)	29, 214, 235, 309, 324, 522, 614, 1161, 1211
MwoI	GCNNNNNNNGC	7 cut(s)	93, 283, 315, 564, 855, 900, 1243
NaeI	GCCGGC	2 cut(s)	405, 1040
NciI	CCSGG	4 cut(s)	127, 621, 626, 771
NcoI	CCATGG	1 cut(s)	424
NdeII	GATC	9 cut(s)	333, 418, 530, 643, 665, 696, 724, 999, 1476
NgoMIV	GCCGGC	2 cut(s)	403, 1038
NheI	GCTAGC	1 cut(s)	854
NlaIII	CATG	2 cut(s)	428, 1357
NlaIV	GGNNCC	7 cut(s)	287, 408, 618, 635, 1024, 1049, 1129
NmeAIII	GCCGAG	2 cut(s)	830, 999
NmuCI	GTSAC	1 cut(s)	80
NruI	TCGCGA	2 cut(s)	235, 324
PaeR7I	CTCGAG	1 cut(s)	1118
PauI	GCGCGC	1 cut(s)	27
PciSI	GCTCTTC	1 cut(s)	906
PcsI	WCGNNNNNNNCGW	5 cut(s)	333, 338, 705, 711, 720
PdiI	GCCGGC	2 cut(s)	405, 1040
PdmI	GAANNNNTTC	1 cut(s)	1528
PfeI	GAWTC	4 cut(s)	230, 509, 1055, 1373
PflFI	GACNNNGTC	1 cut(s)	104
PfoI	TCCNGGA	1 cut(s)	125
PkrI	GCNGC	8 cut(s)	200, 216, 242, 308, 402, 905, 908, 1228
Ple19I	CGATCG	3 cut(s)	336, 727, 1479
PleI	GAGTC	5 cut(s)	95, 299, 550, 784, 1333
PmaCI	CACGTG	2 cut(s)	1090, 1222
PmlI	CACGTG	2 cut(s)	1090, 1222
PpsI	GAGTC	5 cut(s)	95, 299, 550, 784, 1333
Ppu21I	YACGTR	2 cut(s)	1090, 1222
PpuMI	RGGWCCY	1 cut(s)	991
Psp124BI	GAGCTC	4 cut(s)	57, 134, 279, 303
Psp5II	RGGWCCY	1 cut(s)	991
Psp6I	CCWGG	2 cut(s)	1050, 1112
PspCI	CACGTG	2 cut(s)	1090, 1222
PspFI	CCCAGC	2 cut(s)	96, 1361
PspGI	CCWGG	2 cut(s)	1050, 1112
PspN4I	GGNNCC	7 cut(s)	287, 408, 618, 635, 1024, 1049, 1129
PspPI	GGNCC	7 cut(s)	313, 623, 649, 991, 1093, 1105, 1128
PspPPI	RGGWCCY	1 cut(s)	991
PsuI	RGATCY	2 cut(s)	418, 643
PsyI	GACNNNGTC	1 cut(s)	104
PteI	GCGCGC	1 cut(s)	27
PvuI	CGATCG	3 cut(s)	336, 727, 1479
RruI	TCGCGA	2 cut(s)	235, 324
RsaI	GTAC	1 cut(s)	1067
RsaNI	GTAC	1 cut(s)	1066
SacI	GAGCTC	4 cut(s)	57, 134, 279, 303
SalI	GTCGAC	1 cut(s)	765
SapI	GCTCTTC	1 cut(s)	906
SaqAI	TTAA	3 cut(s)	120, 960, 969
SatI	GCNGC	8 cut(s)	199, 215, 241, 307, 401, 904, 907, 1227
Sau3AI	GATC	9 cut(s)	333, 418, 530, 643, 665, 696, 724, 999, 1476
Sau96I	GGNCC	7 cut(s)	313, 623, 649, 991, 1093, 1105, 1128
SchI	GAGTC	5 cut(s)	95, 300, 551, 785, 1334
ScrFI	CCNGG	6 cut(s)	127, 621, 626, 771, 1052, 1114
SduI	GDGCHC	8 cut(s)	44, 57, 134, 279, 303, 621, 918, 1301
SfaNI	GCATC	2 cut(s)	595, 1021
SfcI	CTRYAG	1 cut(s)	169
Sfr274I	CTCGAG	1 cut(s)	1118
SinI	GGWCC	5 cut(s)	313, 649, 991, 1093, 1105
SlaI	CTCGAG	1 cut(s)	1118
SmlI	CTYRAG	3 cut(s)	974, 1097, 1118
SmoI	CTYRAG	3 cut(s)	974, 1097, 1118
Sse9I	AATT	1 cut(s)	547
SspMI	CTAG	4 cut(s)	6, 855, 1232, 1284
SstI	GAGCTC	4 cut(s)	57, 134, 279, 303
StyD4I	CCNGG	6 cut(s)	125, 619, 624, 769, 1050, 1112
StyI	CCWWGG	3 cut(s)	111, 424, 730
TaaI	ACNGT	7 cut(s)	36, 80, 170, 434, 689, 1303, 1492
TaiI	ACGT	6 cut(s)	47, 330, 711, 883, 1092, 1224
TaqII	GACCGA	1 cut(s)	671
TasI	AATT	1 cut(s)	547
TauI	GCSGC	7 cut(s)	201, 217, 243, 309, 403, 909, 1229
TfiI	GAWTC	4 cut(s)	230, 509, 1055, 1373
Tru1I	TTAA	3 cut(s)	120, 960, 969
Tru9I	TTAA	3 cut(s)	120, 960, 969
TscAI	CASTG	4 cut(s)	163, 1308, 1429, 1507
TseFI	GTSAC	1 cut(s)	80
TseI	GCWGC	1 cut(s)	903
Tsp45I	GTSAC	1 cut(s)	80
TspDTI	ATGAA	1 cut(s)	1277
TspGWI	ACGGA	2 cut(s)	94, 1015
TspRI	CASTG	4 cut(s)	163, 1308, 1429, 1507
Tth111I	GACNNNGTC	1 cut(s)	104
VpaK11BI	GGWCC	5 cut(s)	313, 649, 991, 1093, 1105
XbaI	TCTAGA	1 cut(s)	1231
XcmI	CCANNNNNNNNNTGG	1 cut(s)	431
XhoI	CTCGAG	1 cut(s)	1118
XmiI	GTMKAC	1 cut(s)	766
XmnI	GAANNNNTTC	1 cut(s)	1528
XspI	CTAG	4 cut(s)	6, 855, 1232, 1284
ZraI	GACGTC	1 cut(s)	881

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.