MD03G1017000.v1.1
MYB Family

Bromodomain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr03
OG0006248
Physical Location & Seq
Forward (+)
1341389 .. 1345759
4371 bp
Loading structure...
UTR
Exon/CDS
Intron
MD03G1017000.v1.1.491

Sequence Viewer

Length: 2124 bp
ATGGCTGGGGAACACGGAACGAGAACGCAACTATGGGGGACGTTAGAGGAGCTCTTGCTCGTTTGCGCCGTGAACCGCCATGGCACCCAGAGTTGGGACTCCGTCGCCTTGGAAGTCGGGGGCCGCTGCTCCGCCAAAGCGACAGCGCTCCTCACTGCTCTGAACTGTAGGGACAAGTTCGAGGACATCAAGCGGCGGTTCGTATTGGGAGACGACGACGATTCGTCCAGGAGCCTGGGTGCGATGGTTGACGAGCTGCGAAGGGTGAGGGTCGAGGAGCTCCGACGCGAGGTCCGCCGTCGCGACGTTTCGATCGTGTCGTTGGAGTTGAAGGTGAAGAGGTTGGAGGAGGAGAGGGAGCGCAGCTTGAAGGAGGACGCCGAGGCCACCCGTCCGAGCAAAGATCTCAAGCGCGGGGGAGATGATCAACGGGATGGTTCGCCGGAGAATCTCGCCGGAAAAATGAACTCCGGCTCGGACTTCAATTCCGACGAGCGTGAGAATCGATCCTTCAACGAGTCTAATTCGACGAGCCAAAGGGGCGCGGCGGAGAAGCAGGCGGAGGGGAAAGAGGAGGAGCCCGGGCCGGAACGAAACGAACCAGATCCGATGCGGGCTAAAATCCGGTCCGAACCGGATCGCGATTGCTCTGTTAACGGCAAAGTAGCAGACGATGACGACGAAGACAATCAAAACAACAAAAACGGCGATGATACGGCGAAGGCGAGTCAACTCGACGACTCGAGCGAGTTGTGGGAATCGGGTGGCGAGTCGAAGCTGGAGGCAAAAAGAGGTCGTCGTCATGGTGCGGTGGCGTCGAGGCAGCAGAACAGCGACGTGCAGAGCTCGGCGAGCTTGTCGAAGAGAAAACGACGTCGTGGCGGCGGAGGAGAGGGAGGAGGAGGAGGGAGCAGGAGTAGGAGTAGGAGCAGCAGCGGCGAAGAGGCCGAGGGTGACGAAGTATCTCCCGCCACCAGCAAAGGGGTTAAGCAGCTCAAGCTGGTTAAATCTGAGCCGTTGATCAAGGTCCTCAAGATCATCCGGTCTCATCGGCTCGGCTCCGTATTCGAGCGGCGGCTTCGGAGCCAGGAATCAGAAAGGTACAAAAGTTTGATTCGGCAACACATGGACCTACATATGATTCAATCCAAGCTTAACAAAGGTGTGTACACAGAGGATTGCATCCGCTTGTTCTTCCGTGACCTCCTCCTCCTTTTCAACAACGCCGTCGTCTTCTTCCGCAAGAACTCACTAGAGCACAACGCAGCTCAAGAGCTCCGCTCCATTGTGCTAAAGGAAATGAACGACCAGCTCCCGAAACCACAATCCGCAACCGAAACCGAAAAATCGAACGTGCCCAAGATCGAAACCAAAGCTCCGAATATCGAGTCCCATGGCTCTGAGAAACCCACCAAGTCTTCCATTGTTGTGTGTGGAAAACTTGGTTCTGTCAATGCACTCTCTGATGCGAAGAATCGGAAGGGAGATAAGATCGAAGAGAAAGCGAAGGCGGCGAATGTGAAGAAGGCGGATGGTGCTGCATTTGTGAAGGTTGAGGACAAGGGGGTTAGGAGACGGAGGACGCAAGAAAGAGGCGGGTGGAGAGGCACGAGCACGAGGGGCAGGAATGCAGGGAAGCCGACCAAGCCGCACGAGTATGGTGTCAATGAACTCAGTTCACATGACGGTTTGGACGCGTTGAAAGCGGAGAAGGAGAAGAAAGAAAACGGAAGGAAGAAGCAAGGCGCGGCGAGGTTCTTGAAGCGAATGAAGCAGACCTCGAGTACTGAAGTGAAGAAGGAGAATTCGGATGGTACCGAGGAGGATAGCGAGGAGAGCGAGGACGAGAAGAAGAAGAAGAAGAAGCCGACGAGGGTAAGGAGGAAGCCGGAGGTTGAGAGGAAGGAGAGGGTGACGCGGAGTTCAACGGAAAGCGGAGGAGGGAGGGGAGGGGGAAGAAGGAGTCAGGAGAGCAATGGGAGGGGAAGAAGAGGGGTTGGGAGGCCACCGAAGAGGCCGGAAACTTCGGCGGCTGGGGCGGGTAGCGGGAAGAGAGGGAGAGACAACGGGGAGGCGGGTCAGGTGGGGAGTGCAGGGAGGCCGAGAAAGCGTACAAGGAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Bromodomain Myb_DNA-binding

Protein Analysis

708

Amino Acids

78.42

Weight (kDa)

9.76

Isoelectric Point (pI)

61.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Bromodomain PF00439 342 - 424 6.6e-10 Bromodomain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 877
Acc65I GGTACC 1 cut(s) 1814
AccB1I GGYRCC 2 cut(s) 83, 1814
AccBSI CCGCTC 2 cut(s) 1072, 1281
AccII CGCG 8 cut(s) 288, 303, 414, 545, 642, 1697, 1748, 1918
AclWI GGATC 3 cut(s) 501, 599, 645
AcsI RAATTY 1 cut(s) 1804
AcuI CTGAAG 1 cut(s) 1809
AcyI GRCGYC 3 cut(s) 378, 815, 874
AfaI GTAC 5 cut(s) 1103, 1169, 1786, 1816, 2113
AfeI AGCGCT 1 cut(s) 147
AfiI CCNNNNNNNGG 4 cut(s) 93, 94, 289, 981
AflIII ACRYGT 1 cut(s) 1695
AgsI TTSAA 9 cut(s) 331, 370, 484, 514, 1145, 1219, 1702, 1762, 1926
AhdI GACNNNNNGTC 2 cut(s) 223, 290
AjiI CACGTC 1 cut(s) 838
AjnI CCWGG 3 cut(s) 227, 234, 1086
Alw21I GWGCWC 6 cut(s) 54, 282, 848, 1260, 1278, 1616
Alw26I GTCTC 4 cut(s) 204, 1050, 1567, 2055
AlwI GGATC 3 cut(s) 501, 599, 645
Ama87I CYCGRG 3 cut(s) 581, 742, 1780
Aor51HI AGCGCT 1 cut(s) 147
AoxI GGCC 7 cut(s) 121, 384, 584, 945, 2003, 2015, 2099
ApeKI GCWGC 9 cut(s) 126, 256, 363, 823, 930, 933, 991, 1265, 1538
ApoI RAATTY 1 cut(s) 1804
ArsI GACNNNNNNTTYG 2 cut(s) 1373, 1405
Asp718I GGTACC 1 cut(s) 1814
AspLEI GCGC 6 cut(s) 68, 148, 363, 414, 545, 1748
AspS9I GGNCC 6 cut(s) 121, 292, 584, 627, 1027, 1129
AsuC2I CCSGG 2 cut(s) 582, 583
AsuHPI GGTGA 4 cut(s) 277, 346, 965, 1924
AvaI CYCGRG 3 cut(s) 581, 742, 1780
AvaII GGWCC 4 cut(s) 292, 627, 1027, 1129
BaeGI GKGCMC 1 cut(s) 1359
BaeI ACNNNNGTAYC 2 cut(s) 1093, 1126
BanI GGYRCC 2 cut(s) 83, 1814
BanII GRGCYC 5 cut(s) 54, 282, 582, 848, 1278
BauI CACGAG 3 cut(s) 1609, 1615, 1652
BbsI GAAGAC 3 cut(s) 690, 1225, 1410
Bbv12I GWGCWC 6 cut(s) 54, 282, 848, 1260, 1278, 1616
BbvI GCAGC 9 cut(s) 113, 243, 375, 835, 942, 945, 1003, 1277, 1525
BccI CCATC 4 cut(s) 238, 428, 1526, 1805
BceAI ACGGC 7 cut(s) 53, 282, 673, 721, 732, 1000, 1211
BciT130I CCWGG 3 cut(s) 229, 236, 1088
BclI TGATCA 2 cut(s) 424, 1020
BcnI CCSGG 2 cut(s) 582, 583
BcoDI GTCTC 4 cut(s) 204, 1050, 1567, 2055
BfaI CTAG 1 cut(s) 1253
BfmI CTRYAG 1 cut(s) 166
BfoI RGCGCY 1 cut(s) 149
BglI GCCNNNNNGGC 1 cut(s) 540
BglII AGATCT 1 cut(s) 403
BmcAI AGTACT 1 cut(s) 1786
Bme1390I CCNGG 5 cut(s) 229, 236, 582, 583, 1088
Bme18I GGWCC 4 cut(s) 292, 627, 1027, 1129
BmeRI GACNNNNNGTC 2 cut(s) 223, 290
BmeT110I CYCGRG 3 cut(s) 581, 742, 1780
BmgBI CACGTC 1 cut(s) 838
BmgT120I GGNCC 6 cut(s) 121, 292, 584, 627, 1027, 1129
BmiI GGNNCC 7 cut(s) 85, 122, 233, 579, 1060, 1085, 1816
BmrFI CCNGG 5 cut(s) 229, 236, 582, 583, 1088
BmsI GCATC 3 cut(s) 600, 1191, 1456
BpiI GAAGAC 3 cut(s) 690, 1225, 1410
BplI GAGNNNNNCTC 2 cut(s) 1265, 1297
BpmI CTGGAG 1 cut(s) 800
BpuEI CTTGAG 4 cut(s) 392, 980, 1016, 1254
BpuMI CCSGG 2 cut(s) 582, 583
Bsa29I ATCGAT 1 cut(s) 505
BsaHI GRCGYC 3 cut(s) 378, 815, 874
BsaI GGTCTC 1 cut(s) 1050
BsaJI CCNNGG 8 cut(s) 79, 108, 235, 381, 581, 948, 1393, 1818
BsaWI WCCGGW 3 cut(s) 624, 634, 1041
BsaXI ACNNNNNCTCC 8 cut(s) 223, 253, 901, 907, 931, 937, 1360, 1390
Bsc4I CCNNNNNNNGG 4 cut(s) 93, 94, 289, 981
Bse3DI GCAATG 1 cut(s) 1981
BseBI CCWGG 3 cut(s) 229, 236, 1088
BseCI ATCGAT 1 cut(s) 505
BseDI CCNNGG 8 cut(s) 79, 108, 235, 381, 581, 948, 1393, 1818
BseGI GGATG 5 cut(s) 439, 1038, 1182, 1537, 1816
BseLI CCNNNNNNNGG 4 cut(s) 93, 94, 289, 981
BseMI GCAATG 1 cut(s) 1981
BseMII CTCAG 3 cut(s) 1002, 1392, 1687
BseSI GKGCMC 1 cut(s) 1359
BseXI GCAGC 9 cut(s) 113, 243, 375, 835, 942, 945, 1003, 1277, 1525
BseYI CCCAGC 2 cut(s) 5, 2033
BsgI GTGCAG 2 cut(s) 860, 2112
Bsh1236I CGCG 8 cut(s) 288, 303, 414, 545, 642, 1697, 1748, 1918
Bsh1285I CGRYCG 1 cut(s) 315
BshFI GGCC 7 cut(s) 123, 386, 586, 947, 2005, 2017, 2101
BshNI GGYRCC 2 cut(s) 83, 1814
BshVI ATCGAT 1 cut(s) 505
BsiEI CGRYCG 1 cut(s) 315
BsiHKAI GWGCWC 6 cut(s) 54, 282, 848, 1260, 1278, 1616
BsiHKCI CYCGRG 3 cut(s) 581, 742, 1780
BslFI GGGAC 4 cut(s) 52, 110, 185, 1375
BslI CCNNNNNNNGG 4 cut(s) 93, 94, 289, 981
BsmAI GTCTC 4 cut(s) 204, 1050, 1567, 2055
BsmBI CGTCTC 2 cut(s) 204, 1567
BsmFI GGGAC 4 cut(s) 52, 110, 185, 1375
BsmI GAATGC 1 cut(s) 1633
BsnI GGCC 7 cut(s) 123, 386, 586, 947, 2005, 2017, 2101
Bso31I GGTCTC 1 cut(s) 1050
BsoBI CYCGRG 3 cut(s) 581, 742, 1780
Bsp1286I GDGCHC 8 cut(s) 54, 282, 582, 848, 1260, 1278, 1359, 1616
Bsp1407I TGTACA 1 cut(s) 1167
Bsp19I CCATGG 2 cut(s) 79, 1393
Bsp68I TCGCGA 2 cut(s) 303, 642
BspANI GGCC 7 cut(s) 123, 386, 586, 947, 2005, 2017, 2101
BspCNI CTCAG 3 cut(s) 1003, 1393, 1686
BspDI ATCGAT 1 cut(s) 505
BspFNI CGCG 8 cut(s) 288, 303, 414, 545, 642, 1697, 1748, 1918
BspLI GGNNCC 7 cut(s) 85, 122, 233, 579, 1060, 1085, 1816
BspPI GGATC 3 cut(s) 501, 599, 645
BspT107I GGYRCC 2 cut(s) 83, 1814
BspTNI GGTCTC 1 cut(s) 1050
BsrBI CCGCTC 2 cut(s) 1072, 1281
BsrDI GCAATG 1 cut(s) 1981
BsrGI TGTACA 1 cut(s) 1167
BssECI CCNNGG 8 cut(s) 79, 108, 235, 381, 581, 948, 1393, 1818
BssNI GRCGYC 3 cut(s) 378, 815, 874
BssSI CACGAG 3 cut(s) 1609, 1615, 1652
BssT1I CCWWGG 3 cut(s) 79, 108, 1393
Bst2BI CACGAG 3 cut(s) 1609, 1615, 1652
Bst2UI CCWGG 3 cut(s) 229, 236, 1088
Bst4CI ACNGT 2 cut(s) 167, 1688
Bst6I CTCTTC 7 cut(s) 332, 857, 936, 1491, 1984, 2006, 2045
BstACI GRCGYC 3 cut(s) 378, 815, 874
BstAUI TGTACA 1 cut(s) 1167
BstC8I GCNNGC 3 cut(s) 558, 615, 853
BstDEI CTNAG 3 cut(s) 1011, 1401, 1673
BstDSI CCRYGG 2 cut(s) 79, 1393
BstF5I GGATG 5 cut(s) 439, 1038, 1182, 1537, 1816
BstFNI CGCG 8 cut(s) 288, 303, 414, 545, 642, 1697, 1748, 1918
BstH2I RGCGCY 1 cut(s) 149
BstHHI GCGC 6 cut(s) 68, 148, 363, 414, 545, 1748
BstMAI GTCTC 4 cut(s) 204, 1050, 1567, 2055
BstMCI CGRYCG 1 cut(s) 315
BstNI CCWGG 3 cut(s) 229, 236, 1088
BstSCI CCNGG 5 cut(s) 227, 234, 580, 581, 1086
BstSFI CTRYAG 1 cut(s) 166
BstSLI GKGCMC 1 cut(s) 1359
BstUI CGCG 8 cut(s) 288, 303, 414, 545, 642, 1697, 1748, 1918
BstV1I GCAGC 9 cut(s) 113, 243, 375, 835, 942, 945, 1003, 1277, 1525
BstV2I GAAGAC 3 cut(s) 690, 1225, 1410
BstX2I RGATCY 2 cut(s) 403, 604
BstXI CCANNNNNNTGG 1 cut(s) 235
BstYI RGATCY 2 cut(s) 403, 604
Bsu15I ATCGAT 1 cut(s) 505
BsuRI GGCC 7 cut(s) 123, 386, 586, 947, 2005, 2017, 2101
BsuTUI ATCGAT 1 cut(s) 505
BtgI CCRYGG 2 cut(s) 79, 1393
BtgZI GCGATG 2 cut(s) 257, 723
BtrI CACGTC 1 cut(s) 838
BtsCI GGATG 5 cut(s) 439, 1038, 1182, 1537, 1816
BtsI GCAGTG 1 cut(s) 153
BtsIMutI CAGTG 1 cut(s) 153
BtuMI TCGCGA 2 cut(s) 303, 642
Cac8I GCNNGC 3 cut(s) 558, 615, 853
CfoI GCGC 6 cut(s) 68, 148, 363, 414, 545, 1748
Cfr13I GGNCC 6 cut(s) 121, 292, 584, 627, 1027, 1129
Cfr9I CCCGGG 1 cut(s) 581
ClaI ATCGAT 1 cut(s) 505
CpoI CGGWCCG 1 cut(s) 627
CseI GACGC 6 cut(s) 294, 386, 804, 1591, 1703, 1924
Csp6I GTAC 5 cut(s) 1102, 1168, 1785, 1815, 2112
CspI CGGWCCG 1 cut(s) 627
CviAII CATG 5 cut(s) 80, 803, 1126, 1394, 1682
CviQI GTAC 5 cut(s) 1102, 1168, 1785, 1815, 2112
DdeI CTNAG 3 cut(s) 1011, 1401, 1673
DriI GACNNNNNGTC 2 cut(s) 223, 290
Eam1104I CTCTTC 7 cut(s) 332, 857, 936, 1491, 1984, 2006, 2045
Eam1105I GACNNNNNGTC 2 cut(s) 223, 290
EarI CTCTTC 7 cut(s) 332, 857, 936, 1491, 1984, 2006, 2045
EciI GGCGGA 6 cut(s) 121, 284, 563, 575, 900, 1544
Ecl136II GAGCTC 4 cut(s) 52, 280, 846, 1276
Eco130I CCWWGG 3 cut(s) 79, 108, 1393
Eco24I GRGCYC 5 cut(s) 54, 282, 582, 848, 1278
Eco31I GGTCTC 1 cut(s) 1050
Eco47I GGWCC 4 cut(s) 292, 627, 1027, 1129
Eco47III AGCGCT 1 cut(s) 147
Eco53kI GAGCTC 4 cut(s) 52, 280, 846, 1276
Eco57I CTGAAG 1 cut(s) 1809
Eco88I CYCGRG 3 cut(s) 581, 742, 1780
EcoICRI GAGCTC 4 cut(s) 52, 280, 846, 1276
EcoO109I RGGNCCY 1 cut(s) 1027
EcoRI GAATTC 1 cut(s) 1804
EcoRII CCWGG 3 cut(s) 227, 234, 1086
EcoT14I CCWWGG 3 cut(s) 79, 108, 1393
EcoT38I GRGCYC 5 cut(s) 54, 282, 582, 848, 1278
ErhI CCWWGG 3 cut(s) 79, 108, 1393
Esp3I CGTCTC 2 cut(s) 204, 1567
FaeI CATG 5 cut(s) 83, 806, 1129, 1397, 1685
FaiI YATR 9 cut(s) 34, 81, 804, 1127, 1137, 1139, 1395, 1659, 1683
FaqI GGGAC 4 cut(s) 52, 110, 185, 1375
FatI CATG 5 cut(s) 79, 802, 1125, 1393, 1681
FauI CCCGC 7 cut(s) 407, 606, 976, 1589, 2032, 2039, 2068
FauNDI CATATG 1 cut(s) 1137
FbaI TGATCA 2 cut(s) 424, 1020
FokI GGATG 5 cut(s) 446, 1025, 1169, 1544, 1823
FriOI GRGCYC 5 cut(s) 54, 282, 582, 848, 1278
FspBI CTAG 1 cut(s) 1253
GlaI GCGC 6 cut(s) 67, 147, 362, 413, 544, 1747
GsaI CCCAGC 2 cut(s) 9, 2037
GsuI CTGGAG 1 cut(s) 800
HaeII RGCGCY 1 cut(s) 149
HaeIII GGCC 7 cut(s) 123, 386, 586, 947, 2005, 2017, 2101
HgaI GACGC 6 cut(s) 294, 386, 804, 1591, 1703, 1924
HhaI GCGC 6 cut(s) 68, 148, 363, 414, 545, 1748
Hin1I GRCGYC 3 cut(s) 378, 815, 874
Hin1II CATG 5 cut(s) 83, 806, 1129, 1397, 1685
Hin6I GCGC 6 cut(s) 66, 146, 361, 412, 543, 1746
HinP1I GCGC 6 cut(s) 66, 146, 361, 412, 543, 1746
HincII GTYRAC 3 cut(s) 250, 655, 731
HindII GTYRAC 3 cut(s) 250, 655, 731
HindIII AAGCTT 1 cut(s) 1151
HpaI GTTAAC 1 cut(s) 655
HphI GGTGA 4 cut(s) 277, 346, 965, 1924
Hpy166II GTNNAC 7 cut(s) 73, 250, 655, 731, 1168, 1170, 1679
Hpy188III TCNNGA 7 cut(s) 302, 641, 1033, 1271, 1315, 1759, 1967
Hpy8I GTNNAC 7 cut(s) 73, 250, 655, 731, 1168, 1170, 1679
HpyCH4III ACNGT 2 cut(s) 167, 1688
HpyCH4IV ACGT 5 cut(s) 41, 306, 837, 874, 1353
HpyCH4V TGCA 6 cut(s) 841, 1182, 1457, 1541, 1631, 2093
HpyF3I CTNAG 3 cut(s) 1011, 1401, 1673
HpySE526I ACGT 5 cut(s) 41, 306, 837, 874, 1353
Hsp92I GRCGYC 3 cut(s) 378, 815, 874
Hsp92II CATG 5 cut(s) 83, 806, 1129, 1397, 1685
HspAI GCGC 6 cut(s) 66, 146, 361, 412, 543, 1746
KpnI GGTACC 1 cut(s) 1818
Ksp22I TGATCA 2 cut(s) 424, 1020
KspAI GTTAAC 1 cut(s) 655
Lsp1109I GCAGC 9 cut(s) 113, 243, 375, 835, 942, 945, 1003, 1277, 1525
LweI GCATC 3 cut(s) 600, 1191, 1456
MaeI CTAG 1 cut(s) 1253
MaeII ACGT 5 cut(s) 41, 306, 837, 874, 1353
MaeIII GTNAC 3 cut(s) 953, 1199, 1912
MbiI CCGCTC 2 cut(s) 1072, 1281
MflI RGATCY 2 cut(s) 403, 604
MhlI GDGCHC 8 cut(s) 54, 282, 582, 848, 1260, 1278, 1359, 1616
MluCI AATT 3 cut(s) 484, 523, 1804
MluI ACGCGT 1 cut(s) 1695
MlyI GAGTC 7 cut(s) 92, 527, 734, 736, 779, 1397, 1972
MmeI TCCRAC 4 cut(s) 303, 307, 324, 513
MseI TTAA 4 cut(s) 654, 987, 1005, 1155
MslI CAYNNNNRTG 2 cut(s) 1427, 1656
MspA1I CMGCKG 2 cut(s) 126, 936
MspR9I CCNGG 5 cut(s) 229, 236, 582, 583, 1088
Mva1269I GAATGC 1 cut(s) 1633
MvaI CCWGG 3 cut(s) 229, 236, 1088
MvnI CGCG 8 cut(s) 288, 303, 414, 545, 642, 1697, 1748, 1918
NciI CCSGG 2 cut(s) 582, 583
NcoI CCATGG 2 cut(s) 79, 1393
NdeI CATATG 1 cut(s) 1137
NlaIII CATG 5 cut(s) 83, 806, 1129, 1397, 1685
NlaIV GGNNCC 7 cut(s) 85, 122, 233, 579, 1060, 1085, 1816
NmeAIII GCCGAG 4 cut(s) 406, 827, 973, 1035
NmuCI GTSAC 3 cut(s) 953, 1199, 1912
NruI TCGCGA 2 cut(s) 303, 642
PaeR7I CTCGAG 2 cut(s) 742, 1780
PcsI WCGNNNNNNNCGW 6 cut(s) 66, 312, 317, 678, 722, 744
PctI GAATGC 1 cut(s) 1633
PfeI GAWTC 8 cut(s) 221, 448, 502, 758, 1091, 1114, 1141, 1474
PflFI GACNNNGTC 1 cut(s) 101
PfoI TCCNGGA 1 cut(s) 227
Ple19I CGATCG 1 cut(s) 315
PleI GAGTC 7 cut(s) 92, 526, 734, 735, 778, 1396, 1971
PpsI GAGTC 7 cut(s) 92, 526, 734, 735, 778, 1396, 1971
PpuMI RGGWCCY 1 cut(s) 1027
Psp124BI GAGCTC 4 cut(s) 54, 282, 848, 1278
Psp5II RGGWCCY 1 cut(s) 1027
Psp6I CCWGG 3 cut(s) 227, 234, 1086
PspFI CCCAGC 2 cut(s) 5, 2033
PspGI CCWGG 3 cut(s) 227, 234, 1086
PspN4I GGNNCC 7 cut(s) 85, 122, 233, 579, 1060, 1085, 1816
PspPI GGNCC 6 cut(s) 121, 292, 584, 627, 1027, 1129
PspPPI RGGWCCY 1 cut(s) 1027
PspXI VCTCGAGB 2 cut(s) 742, 1780
PsuI RGATCY 2 cut(s) 403, 604
PsyI GACNNNGTC 1 cut(s) 101
PvuI CGATCG 1 cut(s) 315
RruI TCGCGA 2 cut(s) 303, 642
RsaI GTAC 5 cut(s) 1103, 1169, 1786, 1816, 2113
RsaNI GTAC 5 cut(s) 1102, 1168, 1785, 1815, 2112
RseI CAYNNNNRTG 2 cut(s) 1427, 1656
Rsr2I CGGWCCG 1 cut(s) 627
RsrII CGGWCCG 1 cut(s) 627
SacI GAGCTC 4 cut(s) 54, 282, 848, 1278
SaqAI TTAA 4 cut(s) 654, 987, 1005, 1155
Sau96I GGNCC 6 cut(s) 121, 292, 584, 627, 1027, 1129
ScaI AGTACT 1 cut(s) 1786
SchI GAGTC 7 cut(s) 92, 527, 734, 736, 779, 1397, 1972
ScrFI CCNGG 5 cut(s) 229, 236, 582, 583, 1088
SduI GDGCHC 8 cut(s) 54, 282, 582, 848, 1260, 1278, 1359, 1616
SfaNI GCATC 3 cut(s) 600, 1191, 1456
SfcI CTRYAG 1 cut(s) 166
Sfr274I CTCGAG 2 cut(s) 742, 1780
SinI GGWCC 4 cut(s) 292, 627, 1027, 1129
SlaI CTCGAG 2 cut(s) 742, 1780
SmaI CCCGGG 1 cut(s) 583
SmiMI CAYNNNNRTG 2 cut(s) 1427, 1656
SmlI CTYRAG 6 cut(s) 407, 742, 995, 1031, 1269, 1780
SmoI CTYRAG 6 cut(s) 407, 742, 995, 1031, 1269, 1780
SrfI GCCCGGGC 1 cut(s) 583
Sse9I AATT 3 cut(s) 484, 523, 1804
SspMI CTAG 1 cut(s) 1253
SstI GAGCTC 4 cut(s) 54, 282, 848, 1278
StyD4I CCNGG 5 cut(s) 227, 234, 580, 581, 1086
StyI CCWWGG 3 cut(s) 79, 108, 1393
TaaI ACNGT 2 cut(s) 167, 1688
TaiI ACGT 5 cut(s) 44, 309, 840, 877, 1356
TasI AATT 3 cut(s) 484, 523, 1804
TatI WGTACW 2 cut(s) 1167, 1784
TfiI GAWTC 8 cut(s) 221, 448, 502, 758, 1091, 1114, 1141, 1474
Tru1I TTAA 4 cut(s) 654, 987, 1005, 1155
Tru9I TTAA 4 cut(s) 654, 987, 1005, 1155
TscAI CASTG 1 cut(s) 160
TseFI GTSAC 3 cut(s) 953, 1199, 1912
TseI GCWGC 9 cut(s) 126, 256, 363, 823, 930, 933, 991, 1265, 1538
Tsp45I GTSAC 3 cut(s) 953, 1199, 1912
TspDTI ATGAA 4 cut(s) 479, 1316, 1683, 1784
TspGWI ACGGA 7 cut(s) 30, 91, 1051, 1187, 1591, 1743, 1943
TspMI CCCGGG 1 cut(s) 581
TspRI CASTG 1 cut(s) 160
Tth111I GACNNNGTC 1 cut(s) 101
VpaK11BI GGWCC 4 cut(s) 292, 627, 1027, 1129
XapI RAATTY 1 cut(s) 1804
XhoI CTCGAG 2 cut(s) 742, 1780
XmaI CCCGGG 1 cut(s) 581
XspI CTAG 1 cut(s) 1253
ZraI GACGTC 1 cut(s) 875
ZrmI AGTACT 1 cut(s) 1786
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.