Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0006248

Physical Location & Seq

Genomic Coordinates Reverse (-)

86452327 .. 86455883

Gene Structure 3557 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ35477

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2103 bp

ATGGCTAGTAGGGAACACGAAACGAGCGCGCAACCGTGGGGCACGTTAGAGGAGCTCTTGCTGGTGTCCGCCGTGAACCGTCACGGCACGAAGCGCTGGGACTCCGTCGCCAAGGAGGTTAAGTCCCGGAGCTCCACGACGACAACGGCGGTGTTCACTGCTCAGAACTGTAGGGACAAGTTCGACGACCTCAAACGCCGCTTCGTCGTCTCGCAGCAAAACGACGCCGAATCGCGAAGCGGCGACGACGACGGGCTGGCGTTTATGGTTGACGAGCTACGCAGGCTCCGAGTCGAGGAGCTCCGCCGCGAGGTCCGCCGTCGCGACGTTTCGATCGTGTCGTTGGAGTTGAAGGTGAAGAAGATGGAGGAGGACAGAGACCGGAGCTTGAAGGCGGAGCGGCCGGCTCCGGTGAAGGATCTCCATCGCGACGGTGGAGGAGGAGGAGGAGAGCAATCGGAGTTGCCGGAGAAACTGGCCGGAAAACCAAACTCCGGCAGAGACTTCGTGTCCGATTCCTCCGAGCGCGAGAACCGATCCTTCAACGAGTCCAATTCCACAAGCCAGAGAAGCGAGGCGAAAGCAAACGGCGTCGTGGAGAAAAAAAGGGATGCGGACGCGGAGCCCGGCCCGGAGAGGAACCAACCAGATCCGGTCCAGACCGAAACCCGATCCGAACCGGCCTCCGCCAACGGTAAAGTGATCGACGACGACGACGACGACGTGGACGATAAAAACGATCGCCAAGGCGGAGGAGGAGCAGAGCCGACAACGACGGGTCGACCCGGCGAGTCGAACGAGTTGTCGGGGTCGAAACGGGCGGTGGTAAAGGAAGTGAGGAAGCAGAACAGCGATGTTCAAAGCTCGGCTAGCTTGACGAGGAGGAGGAAACGACGTCGTAAAGGTGGCGATAGTAGCAGCGGCGAAGAGCCCGAGGGTGGTGAGGAAGTTTCTCCCGCCACCACGAAACGGGTTAAGCTCGTTAAACTTGAGCCGTTGGTCAAGGTCCTCAGGATCGTCCGCTCGCATCGGCTCGGCTCCGTATTCCAGCGCCGGCTTCGGAGCCAGGAATCACAAAGGTACAAGAACCTGATTAGGGAACACGTGGACCTCAAGGTGGTCCAATCCCGGCTCGAGAAAGGGGCCTACAACGACTGCACCCACAAGTTCTTCCGCGACCTCCTCCTCGTATTCAGCAACGCCGTCGTTTTCTTCCGCAAGACCGCGCCGGAACACGTGGCGGCTCTAGAGCTACGCTTGCTGGTGTTGAAGGAAATGAACGACCAGCTACCGAGACCTAGACCCGCCGTGAGCACAGTGAAGCCCAAGCCCAATGTAGAGTCCGATATCACTACTACTACTACTTCCATGAGACCCAGCAAGTCGTCTTCGATCGTTGTGTGCGGTAAACGTGGTTCCATCAATGCATTATCGGAAAACAAGAAAGGAATTGTTAGAAAGGTAGAGGTTGAAGAGAAAGAAGCGAAGGTGAAGGTGAATGGGAAGAAGGTTGAAGACAGTGCACCGGTTAAGGTGGAGGACAAGGGTGTGAGGAAGAAAAGGTCGGCTCAGGAAAGAAGGGGAGAGAGAAGGTCGAGGACGACGACAACGAGTAACAGCAAGAATGTAGAAGCGAAGACAAAGCATGAGTCCGGCGGAAATGACGTGAGTATGCGTGATGGTTTGGAGGCGGTGAAGAAAGAAGACGTGAAGAAGAAGCAAGGTGCGGCGAGCTTTTTGAAGAGAATGAAGCAGAATGGTAGTAGAGGAGTTGGACGGGGAAAGAACTCTTCAGATGTTTCAGAGGATGAGAGTAAGGATAGTATGGTGGACGAAGAGGAGGAGGAGGAGGAGGAGGAAAAGAAGAAGAGGACAGGGAGGAAGAAAACGGAGGTGGAGAGGAAAGTGAGGGTGACTCGCAGCTCTAATGGAAGGCGAGGGGGAAGAGGTCAGGAAAGCGGTGGGAGGGGGAAGAGAGGGGTCGGGAGGCCGCCTAAGAAAACAGAGACGGCGGCAGCTGGAAGCGGAAAACGGGGCAGAGACAATGGCGAGGCGGATCAGGTGGGGAGTGCAGGGAGGCCGAGGAAACGAACAAGGAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bromodomain Myb_DNA-binding

Protein Analysis

700

Amino Acids

77.9

Weight (kDa)

9.91

Isoelectric Point (pI)

61.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	11 - 45	2.8e-06	Myb-like DNA-binding domain
Bromodomain	PF00439	336 - 416	1.3e-08	Bromodomain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006248)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44430 AT3G60110
fragaria_vesca	FvH4_3g44130 FvH4_3g44130 FvH4_3g44130
malus_domestica	MD03G1017000.v1.1 MD11G1017600.v1.1 MD11G1018000.v1.1 MD11G1018200.v1.1
prunus_persica	Prupe.6G015400_v2.0.a1
pyrus_communis	pycom03g01460 pycom03g01470 pycom11g01250 pycom11g01320
rosa_chinensis	RchiOBHm_Chr5g0080461
rosa_laevigata	RLG00000036858
rosa_multiflora	Rmu_co8095392.1_g000001 Rmu_sc0020711.1_g000001 Rmu_sc0025164.1_g000001
rosa_roxburghii	Rroxscaffold_1G00002940
rosa_rugosa	Rorug05G0469000 Rorug05G0469100
rosa_samantha	Rh5AG522700 Rh5BG544300 Rh5CG567900 Rh5DG554600
rosa_wichuraiana	Rw0G023230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	898
AccBSI	CCGCTC	2 cut(s)	400, 1023
AccI	GTMKAC	1 cut(s)	781
AccII	CGCG	9 cut(s)	29, 235, 309, 324, 429, 528, 620, 1176, 1226
AclWI	GGATC	6 cut(s)	426, 531, 644, 666, 1022, 2064
AcoI	YGGCCR	2 cut(s)	401, 477
AcuI	CTGAAG	1 cut(s)	1776
AcvI	CACGTG	2 cut(s)	1105, 1237
AcyI	GRCGYC	3 cut(s)	225, 591, 895
AfaI	GTAC	1 cut(s)	1082
AfeI	AGCGCT	1 cut(s)	95
AfiI	CCNNNNNNNGG	7 cut(s)	295, 310, 494, 938, 969, 1096, 1117
AflIII	ACRYGT	2 cut(s)	1102, 1234
AgeI	ACCGGT	1 cut(s)	1525
AgsI	TTSAA	8 cut(s)	352, 391, 544, 860, 1270, 1472, 1514, 1741
AhdI	GACNNNNNGTC	1 cut(s)	508
AjiI	CACGTC	3 cut(s)	724, 1666, 1708
AjnI	CCWGG	1 cut(s)	1065
Alw21I	GWGCWC	5 cut(s)	57, 134, 303, 1316, 1525
Alw26I	GTCTC	7 cut(s)	214, 372, 495, 1288, 1366, 2000, 2034
Alw44I	GTGCAC	1 cut(s)	1521
AlwI	GGATC	6 cut(s)	426, 531, 644, 666, 1022, 2064
Ama87I	CYCGRG	2 cut(s)	932, 1133
Aor51HI	AGCGCT	1 cut(s)	95
AoxI	GGCC	7 cut(s)	401, 477, 628, 681, 1143, 1988, 2078
ApaLI	GTGCAC	1 cut(s)	1521
ApeKI	GCWGC	4 cut(s)	214, 918, 1920, 2015
ArsI	GACNNNNNNTTYG	4 cut(s)	788, 820, 1634, 1666
AsiGI	ACCGGT	1 cut(s)	1525
AspLEI	GCGC	6 cut(s)	29, 31, 96, 528, 1053, 1228
AspS9I	GGNCC	7 cut(s)	313, 629, 655, 1006, 1108, 1120, 1143
AsuC2I	CCSGG	5 cut(s)	127, 627, 632, 786, 1129
AsuHPI	GGTGA	7 cut(s)	367, 424, 953, 1501, 1507, 1705, 1924
AsuNHI	GCTAGC	1 cut(s)	869
AvaI	CYCGRG	2 cut(s)	932, 1133
AvaII	GGWCC	5 cut(s)	313, 655, 1006, 1108, 1120
AxyI	CCTNAGG	1 cut(s)	1010
BaeGI	GKGCMC	2 cut(s)	44, 1525
BanII	GRGCYC	5 cut(s)	57, 134, 303, 627, 933
BbrPI	CACGTG	2 cut(s)	1105, 1237
BbsI	GAAGAC	4 cut(s)	1380, 1521, 1643, 1710
Bbv12I	GWGCWC	5 cut(s)	57, 134, 303, 1316, 1525
BbvI	GCAGC	4 cut(s)	226, 930, 1932, 2027
BccI	CCATC	4 cut(s)	358, 432, 1427, 1673
BceAI	ACGGC	9 cut(s)	56, 100, 162, 303, 604, 979, 1187, 1292, 2025
BcgI	CGANNNNNNTGC	4 cut(s)	487, 521, 1186, 1220
BciT130I	CCWGG	1 cut(s)	1067
BcnI	CCSGG	5 cut(s)	127, 627, 632, 786, 1129
BcoDI	GTCTC	7 cut(s)	214, 372, 495, 1288, 1366, 2000, 2034
BfaI	CTAG	4 cut(s)	6, 870, 1247, 1299
BfmI	CTRYAG	1 cut(s)	169
BfoI	RGCGCY	2 cut(s)	97, 1054
Bme1390I	CCNGG	6 cut(s)	127, 627, 632, 786, 1067, 1129
Bme18I	GGWCC	5 cut(s)	313, 655, 1006, 1108, 1120
BmeRI	GACNNNNNGTC	1 cut(s)	508
BmeT110I	CYCGRG	2 cut(s)	932, 1133
BmgBI	CACGTC	3 cut(s)	724, 1666, 1708
BmgT120I	GGNCC	7 cut(s)	313, 629, 655, 1006, 1108, 1120, 1143
BmiI	GGNNCC	8 cut(s)	287, 408, 624, 641, 1039, 1064, 1144, 1417
BmrFI	CCNGG	6 cut(s)	127, 627, 632, 786, 1067, 1129
BmsI	GCATC	2 cut(s)	601, 1036
BmtI	GCTAGC	1 cut(s)	873
BpiI	GAAGAC	4 cut(s)	1380, 1521, 1643, 1710
BplI	GAGNNNNNCTC	2 cut(s)	1900, 1932
Bpu10I	CCTNAGC	1 cut(s)	1569
BpuEI	CTTGAG	2 cut(s)	1010, 1097
BpuMI	CCSGG	5 cut(s)	127, 627, 632, 786, 1129
BsaAI	YACGTR	2 cut(s)	1105, 1237
BsaBI	GATNNNNATC	1 cut(s)	423
BsaHI	GRCGYC	3 cut(s)	225, 591, 895
BsaI	GGTCTC	3 cut(s)	372, 1288, 1366
BsaJI	CCNNGG	5 cut(s)	35, 111, 745, 933, 2081
BsaWI	WCCGGW	4 cut(s)	381, 409, 652, 1525
BsaXI	ACNNNNNCTCC	4 cut(s)	107, 137, 270, 300
Bsc4I	CCNNNNNNNGG	7 cut(s)	295, 310, 494, 938, 969, 1096, 1117
Bse118I	RCCGGY	4 cut(s)	403, 679, 1053, 1525
Bse1I	ACTGG	1 cut(s)	480
Bse21I	CCTNAGG	1 cut(s)	1010
Bse8I	GATNNNNATC	1 cut(s)	423
BseBI	CCWGG	1 cut(s)	1067
BseDI	CCNNGG	5 cut(s)	35, 111, 745, 933, 2081
BseGI	GGATG	2 cut(s)	616, 1813
BseJI	GATNNNNATC	1 cut(s)	423
BseLI	CCNNNNNNNGG	7 cut(s)	295, 310, 494, 938, 969, 1096, 1117
BseMII	CTCAG	3 cut(s)	176, 1024, 1583
BseNI	ACTGG	1 cut(s)	480
BsePI	GCGCGC	1 cut(s)	27
BseSI	GKGCMC	2 cut(s)	44, 1525
BseX3I	CGGCCG	1 cut(s)	401
BseXI	GCAGC	4 cut(s)	226, 930, 1932, 2027
BseYI	CCCAGC	2 cut(s)	96, 1376
BsgI	GTGCAG	2 cut(s)	1141, 2091
Bsh1236I	CGCG	9 cut(s)	29, 235, 309, 324, 429, 528, 620, 1176, 1226
Bsh1285I	CGRYCG	4 cut(s)	336, 404, 742, 1395
BshFI	GGCC	7 cut(s)	403, 479, 630, 683, 1145, 1990, 2080
BshTI	ACCGGT	1 cut(s)	1525
BsiEI	CGRYCG	4 cut(s)	336, 404, 742, 1395
BsiHKAI	GWGCWC	5 cut(s)	57, 134, 303, 1316, 1525
BsiHKCI	CYCGRG	2 cut(s)	932, 1133
BslFI	GGGAC	3 cut(s)	109, 113, 188
BslI	CCNNNNNNNGG	7 cut(s)	295, 310, 494, 938, 969, 1096, 1117
BsmAI	GTCTC	7 cut(s)	214, 372, 495, 1288, 1366, 2000, 2034
BsmBI	CGTCTC	2 cut(s)	214, 2000
BsmFI	GGGAC	3 cut(s)	109, 113, 188
BsnI	GGCC	7 cut(s)	403, 479, 630, 683, 1145, 1990, 2080
Bso31I	GGTCTC	3 cut(s)	372, 1288, 1366
BsoBI	CYCGRG	2 cut(s)	932, 1133
Bsp1286I	GDGCHC	8 cut(s)	44, 57, 134, 303, 627, 933, 1316, 1525
Bsp68I	TCGCGA	3 cut(s)	235, 324, 429
BspANI	GGCC	7 cut(s)	403, 479, 630, 683, 1145, 1990, 2080
BspCNI	CTCAG	3 cut(s)	175, 1023, 1582
BspFNI	CGCG	9 cut(s)	29, 235, 309, 324, 429, 528, 620, 1176, 1226
BspLI	GGNNCC	8 cut(s)	287, 408, 624, 641, 1039, 1064, 1144, 1417
BspOI	GCTAGC	1 cut(s)	873
BspPI	GGATC	6 cut(s)	426, 531, 644, 666, 1022, 2064
BspQI	GCTCTTC	1 cut(s)	921
BspTNI	GGTCTC	3 cut(s)	372, 1288, 1366
BsrBI	CCGCTC	2 cut(s)	400, 1023
BsrFI	RCCGGY	4 cut(s)	403, 679, 1053, 1525
BsrI	ACTGG	1 cut(s)	480
BssAI	RCCGGY	4 cut(s)	403, 679, 1053, 1525
BssECI	CCNNGG	5 cut(s)	35, 111, 745, 933, 2081
BssHII	GCGCGC	1 cut(s)	27
BssNI	GRCGYC	3 cut(s)	225, 591, 895
BssT1I	CCWWGG	2 cut(s)	111, 745
Bst2UI	CCWGG	1 cut(s)	1067
Bst4CI	ACNGT	7 cut(s)	36, 80, 170, 434, 695, 1318, 1520
Bst6I	CTCTTC	8 cut(s)	921, 1467, 1736, 1795, 1830, 1862, 1939, 1967
BstACI	GRCGYC	3 cut(s)	225, 591, 895
BstBAI	YACGTR	2 cut(s)	1105, 1237
BstC8I	GCNNGC	9 cut(s)	29, 258, 284, 405, 871, 1025, 1055, 1259, 1732
BstDEI	CTNAG	4 cut(s)	162, 1010, 1569, 1995
BstDSI	CCRYGG	1 cut(s)	35
BstF5I	GGATG	2 cut(s)	616, 1813
BstFNI	CGCG	9 cut(s)	29, 235, 309, 324, 429, 528, 620, 1176, 1226
BstH2I	RGCGCY	2 cut(s)	97, 1054
BstHHI	GCGC	6 cut(s)	29, 31, 96, 528, 1053, 1228
BstMAI	GTCTC	7 cut(s)	214, 372, 495, 1288, 1366, 2000, 2034
BstMCI	CGRYCG	4 cut(s)	336, 404, 742, 1395
BstMWI	GCNNNNNNNGC	7 cut(s)	93, 283, 315, 570, 870, 915, 1258
BstNI	CCWGG	1 cut(s)	1067
BstSCI	CCNGG	6 cut(s)	125, 625, 630, 784, 1065, 1127
BstSFI	CTRYAG	1 cut(s)	169
BstSLI	GKGCMC	2 cut(s)	44, 1525
BstUI	CGCG	9 cut(s)	29, 235, 309, 324, 429, 528, 620, 1176, 1226
BstV1I	GCAGC	4 cut(s)	226, 930, 1932, 2027
BstV2I	GAAGAC	4 cut(s)	1380, 1521, 1643, 1710
BstX2I	RGATCY	2 cut(s)	418, 649
BstYI	RGATCY	2 cut(s)	418, 649
BstZI	CGGCCG	1 cut(s)	401
Bsu36I	CCTNAGG	1 cut(s)	1010
BsuRI	GGCC	7 cut(s)	403, 479, 630, 683, 1145, 1990, 2080
BtgI	CCRYGG	1 cut(s)	35
BtgZI	GCGATG	2 cut(s)	410, 867
BtrI	CACGTC	3 cut(s)	724, 1666, 1708
BtsCI	GGATG	2 cut(s)	616, 1813
BtsI	GCAGTG	1 cut(s)	156
BtsIMutI	CAGTG	3 cut(s)	156, 1323, 1525
BtuMI	TCGCGA	3 cut(s)	235, 324, 429
Cac8I	GCNNGC	9 cut(s)	29, 258, 284, 405, 871, 1025, 1055, 1259, 1732
CfoI	GCGC	6 cut(s)	29, 31, 96, 528, 1053, 1228
Cfr10I	RCCGGY	4 cut(s)	403, 679, 1053, 1525
Cfr13I	GGNCC	7 cut(s)	313, 629, 655, 1006, 1108, 1120, 1143
CseI	GACGC	3 cut(s)	233, 580, 626
Csp6I	GTAC	1 cut(s)	1081
CspAI	ACCGGT	1 cut(s)	1525
CviAII	CATG	2 cut(s)	1369, 1646
CviQI	GTAC	1 cut(s)	1081
DdeI	CTNAG	4 cut(s)	162, 1010, 1569, 1995
DriI	GACNNNNNGTC	1 cut(s)	508
EaeI	YGGCCR	2 cut(s)	401, 477
EagI	CGGCCG	1 cut(s)	401
Eam1104I	CTCTTC	8 cut(s)	921, 1467, 1736, 1795, 1830, 1862, 1939, 1967
Eam1105I	GACNNNNNGTC	1 cut(s)	508
EarI	CTCTTC	8 cut(s)	921, 1467, 1736, 1795, 1830, 1862, 1939, 1967
EciI	GGCGGA	8 cut(s)	58, 293, 305, 410, 676, 765, 1671, 2069
Ecl136II	GAGCTC	3 cut(s)	55, 132, 301
EclXI	CGGCCG	1 cut(s)	401
Eco130I	CCWWGG	2 cut(s)	111, 745
Eco24I	GRGCYC	5 cut(s)	57, 134, 303, 627, 933
Eco31I	GGTCTC	3 cut(s)	372, 1288, 1366
Eco32I	GATATC	1 cut(s)	1348
Eco47I	GGWCC	5 cut(s)	313, 655, 1006, 1108, 1120
Eco47III	AGCGCT	1 cut(s)	95
Eco52I	CGGCCG	1 cut(s)	401
Eco53kI	GAGCTC	3 cut(s)	55, 132, 301
Eco57I	CTGAAG	1 cut(s)	1776
Eco72I	CACGTG	2 cut(s)	1105, 1237
Eco81I	CCTNAGG	1 cut(s)	1010
Eco88I	CYCGRG	2 cut(s)	932, 1133
EcoICRI	GAGCTC	3 cut(s)	55, 132, 301
EcoO109I	RGGNCCY	2 cut(s)	1006, 1143
EcoRII	CCWGG	1 cut(s)	1065
EcoRV	GATATC	1 cut(s)	1348
EcoT14I	CCWWGG	2 cut(s)	111, 745
EcoT22I	ATGCAT	1 cut(s)	1429
EcoT38I	GRGCYC	5 cut(s)	57, 134, 303, 627, 933
ErhI	CCWWGG	2 cut(s)	111, 745
Esp3I	CGTCTC	2 cut(s)	214, 2000
FaeI	CATG	2 cut(s)	1372, 1649
FaiI	YATR	5 cut(s)	266, 1370, 1647, 1673, 1826
FaqI	GGGAC	3 cut(s)	109, 113, 188
FatI	CATG	2 cut(s)	1368, 1645
FauI	CCCGC	2 cut(s)	964, 1312
FblI	GTMKAC	1 cut(s)	781
FokI	GGATG	2 cut(s)	623, 1820
FriOI	GRGCYC	5 cut(s)	57, 134, 303, 627, 933
FspBI	CTAG	4 cut(s)	6, 870, 1247, 1299
GlaI	GCGC	6 cut(s)	28, 30, 95, 527, 1052, 1227
GsaI	CCCAGC	2 cut(s)	100, 1380
HaeII	RGCGCY	2 cut(s)	97, 1054
HaeIII	GGCC	7 cut(s)	403, 479, 630, 683, 1145, 1990, 2080
HgaI	GACGC	3 cut(s)	233, 580, 626
HhaI	GCGC	6 cut(s)	29, 31, 96, 528, 1053, 1228
Hin1I	GRCGYC	3 cut(s)	225, 591, 895
Hin1II	CATG	2 cut(s)	1372, 1649
Hin6I	GCGC	6 cut(s)	27, 29, 94, 526, 1051, 1226
HinP1I	GCGC	6 cut(s)	27, 29, 94, 526, 1051, 1226
HincII	GTYRAC	2 cut(s)	271, 782
HindII	GTYRAC	2 cut(s)	271, 782
HphI	GGTGA	7 cut(s)	367, 424, 953, 1501, 1507, 1705, 1924
Hpy166II	GTNNAC	9 cut(s)	76, 156, 271, 727, 782, 1108, 1409, 1523, 1831
Hpy8I	GTNNAC	9 cut(s)	76, 156, 271, 727, 782, 1108, 1409, 1523, 1831
HpyCH4III	ACNGT	7 cut(s)	36, 80, 170, 434, 695, 1318, 1520
HpyCH4IV	ACGT	9 cut(s)	44, 327, 723, 895, 1104, 1236, 1411, 1665, 1707
HpyCH4V	TGCA	4 cut(s)	1158, 1427, 1523, 2072
HpyF10VI	GCNNNNNNNGC	7 cut(s)	93, 283, 315, 570, 870, 915, 1258
HpyF3I	CTNAG	4 cut(s)	162, 1010, 1569, 1995
HpySE526I	ACGT	9 cut(s)	44, 327, 723, 895, 1104, 1236, 1411, 1665, 1707
Hsp92I	GRCGYC	3 cut(s)	225, 591, 895
Hsp92II	CATG	2 cut(s)	1372, 1649
HspAI	GCGC	6 cut(s)	27, 29, 94, 526, 1051, 1226
KroI	GCCGGC	2 cut(s)	403, 1053
KroNI	GCCGGC	2 cut(s)	405, 1055
LguI	GCTCTTC	1 cut(s)	921
Lsp1109I	GCAGC	4 cut(s)	226, 930, 1932, 2027
LweI	GCATC	2 cut(s)	601, 1036
MaeI	CTAG	4 cut(s)	6, 870, 1247, 1299
MaeII	ACGT	9 cut(s)	44, 327, 723, 895, 1104, 1236, 1411, 1665, 1707
MaeIII	GTNAC	3 cut(s)	80, 1613, 1912
MbiI	CCGCTC	2 cut(s)	400, 1023
MflI	RGATCY	2 cut(s)	418, 649
MhlI	GDGCHC	8 cut(s)	44, 57, 134, 303, 627, 933, 1316, 1525
MluCI	AATT	2 cut(s)	553, 1449
MlyI	GAGTC	7 cut(s)	95, 300, 557, 800, 1349, 1658, 1909
MmeI	TCCRAC	2 cut(s)	324, 1753
Mph1103I	ATGCAT	1 cut(s)	1429
MroNI	GCCGGC	2 cut(s)	403, 1053
MseI	TTAA	4 cut(s)	120, 975, 984, 1530
MspA1I	CMGCKG	2 cut(s)	921, 2018
MspR9I	CCNGG	6 cut(s)	127, 627, 632, 786, 1067, 1129
MvaI	CCWGG	1 cut(s)	1067
MvnI	CGCG	9 cut(s)	29, 235, 309, 324, 429, 528, 620, 1176, 1226
MwoI	GCNNNNNNNGC	7 cut(s)	93, 283, 315, 570, 870, 915, 1258
NaeI	GCCGGC	2 cut(s)	405, 1055
NciI	CCSGG	5 cut(s)	127, 627, 632, 786, 1129
NgoMIV	GCCGGC	2 cut(s)	403, 1053
NheI	GCTAGC	1 cut(s)	869
NlaIII	CATG	2 cut(s)	1372, 1649
NlaIV	GGNNCC	8 cut(s)	287, 408, 624, 641, 1039, 1064, 1144, 1417
NmeAIII	GCCGAG	2 cut(s)	845, 1014
NmuCI	GTSAC	2 cut(s)	80, 1912
NruI	TCGCGA	3 cut(s)	235, 324, 429
NsiI	ATGCAT	1 cut(s)	1429
PaeR7I	CTCGAG	1 cut(s)	1133
PauI	GCGCGC	1 cut(s)	27
PciSI	GCTCTTC	1 cut(s)	921
PdiI	GCCGGC	2 cut(s)	405, 1055
PfeI	GAWTC	3 cut(s)	230, 515, 1070
PflFI	GACNNNGTC	1 cut(s)	104
PfoI	TCCNGGA	1 cut(s)	125
PinAI	ACCGGT	1 cut(s)	1525
Ple19I	CGATCG	3 cut(s)	336, 742, 1395
PleI	GAGTC	7 cut(s)	95, 299, 556, 799, 1348, 1657, 1909
PmaCI	CACGTG	2 cut(s)	1105, 1237
PmlI	CACGTG	2 cut(s)	1105, 1237
PpsI	GAGTC	7 cut(s)	95, 299, 556, 799, 1348, 1657, 1909
Ppu21I	YACGTR	2 cut(s)	1105, 1237
PpuMI	RGGWCCY	1 cut(s)	1006
Psp124BI	GAGCTC	3 cut(s)	57, 134, 303
Psp5II	RGGWCCY	1 cut(s)	1006
Psp6I	CCWGG	1 cut(s)	1065
PspCI	CACGTG	2 cut(s)	1105, 1237
PspFI	CCCAGC	2 cut(s)	96, 1376
PspGI	CCWGG	1 cut(s)	1065
PspN4I	GGNNCC	8 cut(s)	287, 408, 624, 641, 1039, 1064, 1144, 1417
PspPI	GGNCC	7 cut(s)	313, 629, 655, 1006, 1108, 1120, 1143
PspPPI	RGGWCCY	1 cut(s)	1006
PsrI	GAACNNNNNNTAC	2 cut(s)	1399, 1431
PsuI	RGATCY	2 cut(s)	418, 649
PsyI	GACNNNGTC	1 cut(s)	104
PteI	GCGCGC	1 cut(s)	27
PvuI	CGATCG	3 cut(s)	336, 742, 1395
PvuII	CAGCTG	1 cut(s)	2018
RruI	TCGCGA	3 cut(s)	235, 324, 429
RsaI	GTAC	1 cut(s)	1082
RsaNI	GTAC	1 cut(s)	1081
SacI	GAGCTC	3 cut(s)	57, 134, 303
SalI	GTCGAC	1 cut(s)	780
SapI	GCTCTTC	1 cut(s)	921
SaqAI	TTAA	4 cut(s)	120, 975, 984, 1530
Sau96I	GGNCC	7 cut(s)	313, 629, 655, 1006, 1108, 1120, 1143
SchI	GAGTC	7 cut(s)	95, 300, 557, 800, 1349, 1658, 1909
ScrFI	CCNGG	6 cut(s)	127, 627, 632, 786, 1067, 1129
SduI	GDGCHC	8 cut(s)	44, 57, 134, 303, 627, 933, 1316, 1525
SfaNI	GCATC	2 cut(s)	601, 1036
SfcI	CTRYAG	1 cut(s)	169
Sfr274I	CTCGAG	1 cut(s)	1133
SinI	GGWCC	5 cut(s)	313, 655, 1006, 1108, 1120
SlaI	CTCGAG	1 cut(s)	1133
SmlI	CTYRAG	3 cut(s)	989, 1112, 1133
SmoI	CTYRAG	3 cut(s)	989, 1112, 1133
Sse9I	AATT	2 cut(s)	553, 1449
SspMI	CTAG	4 cut(s)	6, 870, 1247, 1299
SstI	GAGCTC	3 cut(s)	57, 134, 303
StyD4I	CCNGG	6 cut(s)	125, 625, 630, 784, 1065, 1127
StyI	CCWWGG	2 cut(s)	111, 745
TaaI	ACNGT	7 cut(s)	36, 80, 170, 434, 695, 1318, 1520
TaiI	ACGT	9 cut(s)	47, 330, 726, 898, 1107, 1239, 1414, 1668, 1710
TaqII	GACCGA	1 cut(s)	677
TasI	AATT	2 cut(s)	553, 1449
TauI	GCSGC	9 cut(s)	201, 243, 309, 403, 924, 1244, 1730, 1993, 2015
TfiI	GAWTC	3 cut(s)	230, 515, 1070
Tru1I	TTAA	4 cut(s)	120, 975, 984, 1530
Tru9I	TTAA	4 cut(s)	120, 975, 984, 1530
TscAI	CASTG	3 cut(s)	163, 1323, 1525
TseFI	GTSAC	2 cut(s)	80, 1912
TseI	GCWGC	4 cut(s)	214, 918, 1920, 2015
Tsp45I	GTSAC	2 cut(s)	80, 1912
TspDTI	ATGAA	2 cut(s)	1292, 1763
TspGWI	ACGGA	3 cut(s)	94, 1030, 1904
TspRI	CASTG	3 cut(s)	163, 1323, 1525
Tth111I	GACNNNGTC	1 cut(s)	104
VneI	GTGCAC	1 cut(s)	1521
VpaK11BI	GGWCC	5 cut(s)	313, 655, 1006, 1108, 1120
XbaI	TCTAGA	1 cut(s)	1246
XcmI	CCANNNNNNNNNTGG	1 cut(s)	431
XhoI	CTCGAG	1 cut(s)	1133
XmiI	GTMKAC	1 cut(s)	781
XspI	CTAG	4 cut(s)	6, 870, 1247, 1299
ZraI	GACGTC	1 cut(s)	896
Zsp2I	ATGCAT	1 cut(s)	1429

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.