Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0003227

Physical Location & Seq

Genomic Coordinates Forward (+)

2137604 .. 2141564

Gene Structure 3961 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g02320.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3042 bp

ATGGATGATGTTATGGATATAGACGGCTCTATGTATGCTCAGGTGAAAATACGAGCTACATTCTATCCGAAATTCGAGAATGAGAAGTCGGATCAGGAGATTAGGACTAGAATGATAGAGATGGTGTCAAAAGGGCTGGCGACGTTGGAGGTTTCGCTTAAGCATTCGGGGTCGCTTTTTATGTATGCTGGTAGTGAGGGTGGGGCGTACGCGAAGAATAGTTTTGGGAATATATATACAGCTGTGGGTGTGTTTGTTCTTGGGAGGGTGTTTCGTGAGGCGTGGGGATCTGAGGCAGAGAGAGTGCAAGCGGAGTTTAATGAGTTTCTTGAGAGGAACCGTATGTGCATATCGATGGAGCTTGTCACTGCTGTTTTGGGAGACCACGGACAGCGTCCGAAAGAAGATTTTGTTGTGGTCACGGCTGTCACAGAGTTGGGGAATGGGAAGCCAAAGTTCTACTCGACTCCTGAGATTATTGCATTCTGTCGGAATTGGCGCTTGCCGACGAATCATGTATGGCTGTTCTCAACAAGGAAAGCAGTTACGTCTTTTTTTGCTGCCTTTGATGCCCTGTCCGAAGAAGGAACTGCAACAACTGTATGCAGAGCCTTTGATGAAGTTGCTGATATATCTATACCTGGTTCAAAAGACCATGTCAAGGAGCAGGGTGAAATTTTAGAGGGTATTGTTGCTCGTATTGTAAGCCATGAGAGCTCAAAGCATATGGAGAAAGTATTAAAGGGTATCCCTCCTCCCCCAATGGAAGGAGCTGGTCTTGATTTGGGACCAAGCCTTAGGGAAATCTGCGCTGCAAATAGGTCTGATGAAACACAGCAGATAAAAGCACTTCTTAAGGGTGTTGGCTCCTCTTTTTGCCCTGACCATTCAGACTGGCTTGGGACTGGAGCTGGTGATGCACATTCTAGGAATGCAGATCAGTCAGTTGTATCAAAATTTCTACAATCTCATCCTGCAGATTTTTCTACCACCAAATTGCAGGAAGTGGTTCGTTTGATGAGAGAAAAGCGTTTACCTGCTGCCTTTAAATGCTACCCGAACTACCACAAGCATGATTCCATGTCCAGTGACAATGTTTTCTATAAAATGGTCATTCATGTCCGTAGCGACTCTGCATTTCAGCGTTATCAGAAAGAAATGAAGTCGAAGCCAGGACTGTGGCCTTTGTATAGAGGTTTTTTTGTTGACTTTAATTTGTTCAAAGCAAACAAGAAGAGAGCTGCTGAGATTGCAAAAAACAAAAGCACTGTTGTGGACAATGATGGTGGATGTAGTATATCAGGAAGACATGGATTGGCAGAAGAAGATGCAAACTTAATGATCAAATTGAAATTTCTTACATATAAGCTGCGAACGTTTTTGATCCGCAATGGTTTACCAATTCTATTTAAACAAGGTCCAACTGCTTACAAAACCTATTACTTGAGGCAAATGAAAATATGGGGCACTTCAGCAGGAAAGCAGAGGGAACTCAGCAAGATGCTTGATGAATGGGCTGTGTACATCAAAAGGAAATGCGGAAGCAAACAATTGTCGTCATCAGTGTACCTCAGTGAGGCTGAGCCTTTCCTTGAACAGTATGCAAAACGCAGCCCACATAATCAAGCCCTTATAGGATCTGCTGGAAACTTAGTAATGGCTGAAAACTTCATGGCCATAGTTGAGGGAGGTAGAGATGAAGAGGGTGATCTCGAGAAGGAGTCTGTACCATCAAGCCCCAGTGCCTCAGTTGTGGACAGCATGCCAAAGGCTGAGGGTCTGATTGTATTCTTTCCTGGACTACCTGGCTCAGCCAAGTCAGCACTATGCAAGGAACTACTCAAAGCCCCGGGAGGATTTGGGGATGATCGGCCAGTTCAGAGTCTAATGGGTGATCTTGTAAAAGGAAAATACTGGCAGAAGGTCACCAATGAGCGACGGAAAAAACCATATTCTATAATGCTTGCAGACAAGAATGCACCGAATGTAGAAGTGTGGAGACAGATCGAAGACATGTGCCACAGAACTAGGGCCAATGCTGTACCTGTTATCCCTGATTCTGAAGGAACCGAATCAAATCCTTTTTCTCTTGATGCATTAGCTGTTTTCATGTTTCGTGTGCTTCAACGTGCTAATCATCCGGGAAATCTTGACAAGAATTCTGCAAATGCTGGTTATGTTCTGCTAATGTTCTATCACCTTTATGAGGGGAAGACCCGCAGAGAGTTTGAATGTGAACTAGTTGAGCGTTTTCGTTCACTTGTCAAAATACCACTGCTGACTTCAGAGCGGAATCCATTACCAGATCCTGTGAAATCAATTCTTGAGGATGGAATAGATTTATACAATCGTCACACTGGAAGACATGGAAGATTGGAGTCTAACAAGGGAGCCTACACAAAGGAGTGGGCTAAATGGGAGAAACAGTTGCGAGAGATTTTGTTTGGAAATGCACAGTATCTTAATTCTATTCAGGTTTCCTTTGAGTCTGCTCTTAAGGAAGTATCAGAACAGCTAAGAAGGATTGCAAGAGGTGAGTATAAGACTCCAGAGTACATGACTCCAGATTCTGGGAAAAGGAAGATCGCGGCCATTACATTTGCTGCCATTACCCTGCCTGTTCTCGATATCAAAGCTTTGCTTGATAATTTGGCTGGGAAGCATAGAAAAGCTGGAGCTTTCCTAAAAGACAAGAATTTGGAGAACAGCATTAATAAGGCTCATGTTACTCTTGCGCACAAGAGAAGTCATGGTGTTACTGCCGTGGCTAATTATGGGACCTTTCTACACAAACAGGTCCCTGTGGATATAACTGCGCTAATCTTCACGGATAAACTGGCTGCCTTTGAAGCCTTCCCTGGCTCTGTTGAAGGTGAAAGAGTCATCCCAAAAAATGAGTGGCCTCATGTTACCCTATGGACTGCAGAGGGTGTTGGAGGCAAGGAGGCAAACTTATTAAGCAAATTGCATCTAGAGGGCAAGGCTACCCGTGTTACGATTGACCCACCTGCCACAATTCATGGGGCGCTGGAGTTTTACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000278 GO:0000281 GO:0000394 GO:0000910 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0003972 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006388 GO:0006396 GO:0006399 GO:0006725 GO:0006807 GO:0007049 GO:0007275 GO:0008033 GO:0008150 GO:0008152 GO:0008356 GO:0008380 GO:0008452 GO:0009790 GO:0009791 GO:0009793 GO:0009966 GO:0009987 GO:0010069 GO:0010070 GO:0010154 GO:0010467 GO:0010646 GO:0010928 GO:0016070 GO:0016874 GO:0016886 GO:0022402 GO:0022414 GO:0023051 GO:0032501 GO:0032502 GO:0034470 GO:0034641 GO:0034660 GO:0042245 GO:0043170 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048316 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051301 GO:0061458 GO:0061640 GO:0065007 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

tRNA_lig_CPD

Protein Analysis

1014

Amino Acids

113.22

Weight (kDa)

8.86

Isoelectric Point (pI)

37.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003227)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07910 AT1G07910
fragaria_vesca	FvH4_3g33360 FvH4_3g33360 FvH4_3g33360 FvH4_3g33360 FvH4_3g33360 FvH4_3g33360 FvH4_3g33360 FvH4_3g33360 FvH4_4g02320
malus_domestica	MD03G1112400.v1.1 MD11G1129800.v1.1
prunus_persica	Prupe.6G094700_v2.0.a1
pyrus_communis	pycom11g10750 pycom11g10760
rosa_chinensis	RchiOBHm_Chr4g0389641 RchiOBHm_Chr5g0060751
rosa_laevigata	RLG00000009964 RLG00000035390
rosa_multiflora	Rmu_co8520825.1_g000001 Rmu_sc0006568.1_g000004 Rmu_sc0007419.1_g000006
rosa_roxburghii	Rroxscaffold_1G00019960 Rroxscaffold_5G00335630
rosa_rugosa	Rorug03G0324600 Rorug05G0333400
rosa_samantha	Rh4AG029200 Rh4BG022400 Rh4CG031200 Rh4DG022900 Rh5AG396400 Rh5BG408600 Rh5CG433200 Rh5DG423800
rosa_wichuraiana	Rw4G002180 Rw5G037370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	3016
Acc16I	TGCGCA	1 cut(s)	2736
Acc36I	ACCTGC	2 cut(s)	1045, 3016
AccB7I	CCANNNNNTGG	1 cut(s)	2570
AccBSI	CCGCTC	1 cut(s)	2290
AccII	CGCG	2 cut(s)	212, 2588
AciI	CCGC	6 cut(s)	311, 1387, 1539, 2218, 2290, 2588
AclI	AACGTT	1 cut(s)	1376
AclWI	GGATC	5 cut(s)	99, 295, 1378, 1645, 2300
AcoI	YGGCCR	3 cut(s)	1674, 1871, 2589
AcsI	RAATTY	6 cut(s)	71, 675, 956, 1352, 2158, 2695
AcuI	CTGAAG	3 cut(s)	1455, 2082, 2268
AfaI	GTAC	6 cut(s)	209, 1523, 1568, 1728, 2043, 2555
AfiI	CCNNNNNNNGG	5 cut(s)	661, 767, 1576, 2206, 2570
AflII	CTTAAG	3 cut(s)	158, 854, 2495
AflIII	ACRYGT	1 cut(s)	2013
AgsI	TTSAA	8 cut(s)	648, 1222, 1351, 1595, 2126, 2231, 2849, 2870
AhlI	ACTAGT	1 cut(s)	2239
AjnI	CCWGG	5 cut(s)	640, 1171, 1795, 1804, 2857
AleI	CACNNNNGTG	1 cut(s)	1271
Alw21I	GWGCWC	1 cut(s)	719
Alw26I	GTCTC	2 cut(s)	375, 1993
AlwI	GGATC	5 cut(s)	99, 295, 1378, 1645, 2300
AlwNI	CAGNNNCTG	2 cut(s)	2309, 2570
Ama87I	CYCGRG	2 cut(s)	1712, 1849
AoxI	GGCC	6 cut(s)	1181, 1674, 1871, 2031, 2589, 2900
ApeKI	GCWGC	8 cut(s)	560, 812, 1040, 1241, 1369, 1611, 2603, 2840
ApoI	RAATTY	6 cut(s)	71, 675, 956, 1352, 2158, 2695
AseI	ATTAAT	1 cut(s)	2712
Asp700I	GAANNNNTTC	1 cut(s)	1008
AspLEI	GCGC	5 cut(s)	501, 812, 2737, 2818, 3028
AspS9I	GGNCC	5 cut(s)	788, 1418, 2031, 2778, 2797
AsuC2I	CCSGG	3 cut(s)	1850, 1851, 2142
AsuHPI	GGTGA	9 cut(s)	55, 683, 926, 1718, 1904, 1918, 2189, 2546, 2885
AvaI	CYCGRG	2 cut(s)	1712, 1849
AvaII	GGWCC	4 cut(s)	788, 1418, 2778, 2797
AxyI	CCTNAGG	1 cut(s)	797
BaeGI	GKGCMC	1 cut(s)	1469
BalI	TGGCCA	1 cut(s)	1676
BanII	GRGCYC	1 cut(s)	719
BbsI	GAAGAC	4 cut(s)	1312, 2016, 2219, 2368
Bbv12I	GWGCWC	1 cut(s)	719
BbvCI	CCTCAGC	1 cut(s)	1773
BbvI	GCAGC	8 cut(s)	547, 799, 1027, 1228, 1356, 1623, 2590, 2827
BccI	CCATC	5 cut(s)	115, 349, 1277, 1738, 2324
BceAI	ACGGC	3 cut(s)	40, 438, 2747
BciT130I	CCWGG	5 cut(s)	642, 1173, 1797, 1806, 2859
BciVI	GTATCC	1 cut(s)	758
BclI	TGATCA	1 cut(s)	1341
BcnI	CCSGG	3 cut(s)	1850, 1851, 2142
BcoDI	GTCTC	2 cut(s)	375, 1993
BcuI	ACTAGT	1 cut(s)	2239
BfaI	CTAG	5 cut(s)	108, 927, 2028, 2240, 2972
BfmI	CTRYAG	2 cut(s)	975, 2922
BfoI	RGCGCY	2 cut(s)	502, 3029
BfrI	CTTAAG	3 cut(s)	158, 854, 2495
BfuAI	ACCTGC	2 cut(s)	1045, 3016
BfuI	GTATCC	1 cut(s)	758
BisI	GCNGC	9 cut(s)	561, 813, 1041, 1242, 1370, 1612, 2589, 2604, 2841
BlpI	GCTNAGC	2 cut(s)	1581, 1810
BlsI	GCNGC	9 cut(s)	562, 814, 1042, 1243, 1371, 1613, 2590, 2605, 2842
Bme1390I	CCNGG	8 cut(s)	642, 1173, 1797, 1806, 1850, 1851, 2142, 2859
Bme18I	GGWCC	4 cut(s)	788, 1418, 2778, 2797
BmeT110I	CYCGRG	2 cut(s)	1712, 1849
BmgT120I	GGNCC	5 cut(s)	788, 1418, 2031, 2778, 2797
BmiI	GGNNCC	7 cut(s)	338, 789, 868, 2068, 2392, 2779, 2799
BmrFI	CCNGG	8 cut(s)	642, 1173, 1797, 1806, 1850, 1851, 2142, 2859
BmrI	ACTGGG	1 cut(s)	1734
BmsI	GCATC	6 cut(s)	559, 907, 1318, 1491, 2083, 2977
BmuI	ACTGGG	1 cut(s)	1734
BpiI	GAAGAC	4 cut(s)	1312, 2016, 2219, 2368
BpmI	CTGGAG	4 cut(s)	927, 2532, 2547, 2694
Bpu10I	CCTNAGC	2 cut(s)	39, 1773
Bpu1102I	GCTNAGC	2 cut(s)	1581, 1810
BpuEI	CTTGAG	3 cut(s)	350, 1465, 2345
BpuMI	CCSGG	3 cut(s)	1850, 1851, 2142
Bsa29I	ATCGAT	1 cut(s)	353
BsaI	GGTCTC	1 cut(s)	375
BsaJI	CCNNGG	5 cut(s)	385, 1848, 1849, 2763, 2857
BsaXI	ACNNNNNCTCC	2 cut(s)	2411, 2441
Bsc4I	CCNNNNNNNGG	5 cut(s)	661, 767, 1576, 2206, 2570
Bse1I	ACTGG	8 cut(s)	899, 910, 1086, 1740, 1874, 1919, 2362, 2841
Bse21I	CCTNAGG	1 cut(s)	797
Bse3DI	GCAATG	1 cut(s)	1396
BseBI	CCWGG	5 cut(s)	642, 1173, 1797, 1806, 2859
BseCI	ATCGAT	1 cut(s)	353
BseDI	CCNNGG	5 cut(s)	385, 1848, 1849, 2763, 2857
BseGI	GGATG	7 cut(s)	10, 970, 1295, 1870, 2137, 2335, 2883
BseLI	CCNNNNNNNGG	5 cut(s)	661, 767, 1576, 2206, 2570
BseMI	GCAATG	1 cut(s)	1396
BseNI	ACTGG	8 cut(s)	899, 910, 1086, 1740, 1874, 1919, 2362, 2841
BseRI	GAGGAG	2 cut(s)	744, 859
BseSI	GKGCMC	1 cut(s)	1469
BseXI	GCAGC	8 cut(s)	547, 799, 1027, 1228, 1356, 1623, 2590, 2827
BseYI	CCCAGC	1 cut(s)	2654
Bsh1236I	CGCG	2 cut(s)	212, 2588
BshFI	GGCC	6 cut(s)	1183, 1676, 1873, 2033, 2591, 2902
BshVI	ATCGAT	1 cut(s)	353
BsiHKAI	GWGCWC	1 cut(s)	719
BsiHKCI	CYCGRG	2 cut(s)	1712, 1849
BsiSI	CCGG	2 cut(s)	1850, 2141
BsiWI	CGTACG	1 cut(s)	207
BslFI	GGGAC	4 cut(s)	801, 916, 2783, 2791
BslI	CCNNNNNNNGG	5 cut(s)	661, 767, 1576, 2206, 2570
BsmAI	GTCTC	2 cut(s)	375, 1993
BsmFI	GGGAC	4 cut(s)	801, 916, 2783, 2791
BsmI	GAATGC	4 cut(s)	163, 482, 937, 1981
BsnI	GGCC	6 cut(s)	1183, 1676, 1873, 2033, 2591, 2902
Bso31I	GGTCTC	1 cut(s)	375
BsoBI	CYCGRG	2 cut(s)	1712, 1849
Bsp1286I	GDGCHC	2 cut(s)	719, 1469
Bsp1407I	TGTACA	1 cut(s)	1521
Bsp1720I	GCTNAGC	2 cut(s)	1581, 1810
BspACI	CCGC	6 cut(s)	311, 1387, 1539, 2218, 2290, 2588
BspANI	GGCC	6 cut(s)	1183, 1676, 1873, 2033, 2591, 2902
BspDI	ATCGAT	1 cut(s)	353
BspFNI	CGCG	2 cut(s)	212, 2588
BspLI	GGNNCC	7 cut(s)	338, 789, 868, 2068, 2392, 2779, 2799
BspMAI	CTGCAG	2 cut(s)	979, 2926
BspMI	ACCTGC	2 cut(s)	1045, 3016
BspPI	GGATC	5 cut(s)	99, 295, 1378, 1645, 2300
BspTI	CTTAAG	3 cut(s)	158, 854, 2495
BspTNI	GGTCTC	1 cut(s)	375
BsrBI	CCGCTC	1 cut(s)	2290
BsrDI	GCAATG	1 cut(s)	1396
BsrGI	TGTACA	1 cut(s)	1521
BsrI	ACTGG	8 cut(s)	899, 910, 1086, 1740, 1874, 1919, 2362, 2841
BssECI	CCNNGG	5 cut(s)	385, 1848, 1849, 2763, 2857
Bst2UI	CCWGG	5 cut(s)	642, 1173, 1797, 1806, 2859
Bst4CI	ACNGT	7 cut(s)	341, 601, 1179, 1270, 1599, 2427, 2457
Bst6I	CTCTTC	2 cut(s)	1229, 1695
BstAFI	CTTAAG	3 cut(s)	158, 854, 2495
BstAUI	TGTACA	1 cut(s)	1521
BstC8I	GCNNGC	5 cut(s)	138, 309, 503, 1763, 1965
BstDSI	CCRYGG	2 cut(s)	385, 2763
BstEII	GGTNACC	1 cut(s)	1924
BstENI	CCTNNNNNAGG	2 cut(s)	1574, 2204
BstF5I	GGATG	7 cut(s)	10, 970, 1295, 1870, 2137, 2335, 2883
BstFNI	CGCG	2 cut(s)	212, 2588
BstH2I	RGCGCY	2 cut(s)	502, 3029
BstHHI	GCGC	5 cut(s)	501, 812, 2737, 2818, 3028
BstMAI	GTCTC	2 cut(s)	375, 1993
BstMWI	GCNNNNNNNGC	6 cut(s)	569, 714, 917, 1250, 1820, 2849
BstNI	CCWGG	5 cut(s)	642, 1173, 1797, 1806, 2859
BstNSI	RCATGY	2 cut(s)	1765, 2017
BstPI	GGTNACC	1 cut(s)	1924
BstSCI	CCNGG	8 cut(s)	640, 1171, 1795, 1804, 1848, 1849, 2140, 2857
BstSFI	CTRYAG	2 cut(s)	975, 2922
BstSLI	GKGCMC	1 cut(s)	1469
BstUI	CGCG	2 cut(s)	212, 2588
BstV1I	GCAGC	8 cut(s)	547, 799, 1027, 1228, 1356, 1623, 2590, 2827
BstV2I	GAAGAC	4 cut(s)	1312, 2016, 2219, 2368
BstX2I	RGATCY	3 cut(s)	287, 1637, 2305
BstXI	CCANNNNNNTGG	1 cut(s)	1179
BstYI	RGATCY	3 cut(s)	287, 1637, 2305
Bsu15I	ATCGAT	1 cut(s)	353
Bsu36I	CCTNAGG	1 cut(s)	797
BsuI	GTATCC	1 cut(s)	758
BsuRI	GGCC	6 cut(s)	1183, 1676, 1873, 2033, 2591, 2902
BsuTUI	ATCGAT	1 cut(s)	353
BtgI	CCRYGG	2 cut(s)	385, 2763
BtsCI	GGATG	7 cut(s)	10, 970, 1295, 1870, 2137, 2335, 2883
BtsI	GCAGTG	2 cut(s)	366, 2273
BtsIMutI	CAGTG	8 cut(s)	366, 1093, 1266, 1569, 1579, 1747, 2273, 2355
BveI	ACCTGC	2 cut(s)	1045, 3016
Cac8I	GCNNGC	5 cut(s)	138, 309, 503, 1763, 1965
CaiI	CAGNNNCTG	2 cut(s)	2309, 2570
CfoI	GCGC	5 cut(s)	501, 812, 2737, 2818, 3028
Cfr13I	GGNCC	5 cut(s)	788, 1418, 2031, 2778, 2797
Cfr9I	CCCGGG	1 cut(s)	1849
ClaI	ATCGAT	1 cut(s)	353
CseI	GACGC	1 cut(s)	383
CsiI	ACCWGGT	1 cut(s)	640
Csp6I	GTAC	6 cut(s)	208, 1522, 1567, 1727, 2042, 2554
CspCI	CAANNNNNGTGG	2 cut(s)	1267, 1302
CviQI	GTAC	6 cut(s)	208, 1522, 1567, 1727, 2042, 2554
DraI	TTTAAA	2 cut(s)	1048, 1411
EaeI	YGGCCR	3 cut(s)	1674, 1871, 2589
Eam1104I	CTCTTC	2 cut(s)	1229, 1695
EarI	CTCTTC	2 cut(s)	1229, 1695
Ecl136II	GAGCTC	1 cut(s)	717
Eco24I	GRGCYC	1 cut(s)	719
Eco31I	GGTCTC	1 cut(s)	375
Eco32I	GATATC	1 cut(s)	2629
Eco47I	GGWCC	4 cut(s)	788, 1418, 2778, 2797
Eco53kI	GAGCTC	1 cut(s)	717
Eco57I	CTGAAG	3 cut(s)	1455, 2082, 2268
Eco81I	CCTNAGG	1 cut(s)	797
Eco88I	CYCGRG	2 cut(s)	1712, 1849
Eco91I	GGTNACC	1 cut(s)	1924
EcoICRI	GAGCTC	1 cut(s)	717
EcoNI	CCTNNNNNAGG	2 cut(s)	1574, 2204
EcoO109I	RGGNCCY	2 cut(s)	2778, 2797
EcoO65I	GGTNACC	1 cut(s)	1924
EcoRI	GAATTC	1 cut(s)	2158
EcoRII	CCWGG	5 cut(s)	640, 1171, 1795, 1804, 2857
EcoRV	GATATC	1 cut(s)	2629
EcoT22I	ATGCAT	1 cut(s)	2098
EcoT38I	GRGCYC	1 cut(s)	719
FalI	AAGNNNNNCTT	4 cut(s)	837, 869, 2625, 2657
FaqI	GGGAC	4 cut(s)	801, 916, 2783, 2791
FauI	CCCGC	1 cut(s)	2225
FauNDI	CATATG	1 cut(s)	726
FbaI	TGATCA	1 cut(s)	1341
Fnu4HI	GCNGC	9 cut(s)	561, 813, 1041, 1242, 1370, 1612, 2589, 2604, 2841
FokI	GGATG	7 cut(s)	17, 957, 1302, 1877, 2124, 2342, 2870
FriOI	GRGCYC	1 cut(s)	719
Fsp4HI	GCNGC	9 cut(s)	561, 813, 1041, 1242, 1370, 1612, 2589, 2604, 2841
FspBI	CTAG	5 cut(s)	108, 927, 2028, 2240, 2972
FspI	TGCGCA	1 cut(s)	2736
GlaI	GCGC	5 cut(s)	500, 811, 2736, 2817, 3027
GluI	GCNGC	9 cut(s)	561, 813, 1041, 1242, 1370, 1612, 2589, 2604, 2841
GsaI	CCCAGC	1 cut(s)	2658
GsuI	CTGGAG	4 cut(s)	927, 2532, 2547, 2694
HaeII	RGCGCY	2 cut(s)	502, 3029
HaeIII	GGCC	6 cut(s)	1183, 1676, 1873, 2033, 2591, 2902
HapII	CCGG	2 cut(s)	1850, 2141
HgaI	GACGC	1 cut(s)	383
HhaI	GCGC	5 cut(s)	501, 812, 2737, 2818, 3028
Hin6I	GCGC	5 cut(s)	499, 810, 2735, 2816, 3026
HinP1I	GCGC	5 cut(s)	499, 810, 2735, 2816, 3026
HincII	GTYRAC	1 cut(s)	1207
HindII	GTYRAC	1 cut(s)	1207
HindIII	AAGCTT	1 cut(s)	2634
HpaII	CCGG	2 cut(s)	1850, 2141
HphI	GGTGA	9 cut(s)	55, 683, 926, 1718, 1904, 1918, 2189, 2546, 2885
Hpy166II	GTNNAC	9 cut(s)	1034, 1207, 1276, 1397, 1522, 1567, 1756, 2237, 2258
Hpy8I	GTNNAC	9 cut(s)	1034, 1207, 1276, 1397, 1522, 1567, 1756, 2237, 2258
Hpy99I	CGWCG	3 cut(s)	145, 511, 1941
HpyAV	CCTTC	8 cut(s)	578, 761, 1711, 1915, 2057, 2514, 2863, 2864
HpyCH4III	ACNGT	7 cut(s)	341, 601, 1179, 1270, 1599, 2427, 2457
HpyCH4IV	ACGT	4 cut(s)	143, 548, 1376, 2128
HpyF10VI	GCNNNNNNNGC	6 cut(s)	569, 714, 917, 1250, 1820, 2849
HpySE526I	ACGT	4 cut(s)	143, 548, 1376, 2128
HspAI	GCGC	5 cut(s)	499, 810, 2735, 2816, 3026
Ksp22I	TGATCA	1 cut(s)	1341
LmnI	GCTCC	7 cut(s)	358, 664, 770, 872, 908, 2390, 2675
Lsp1109I	GCAGC	8 cut(s)	547, 799, 1027, 1228, 1356, 1623, 2590, 2827
LweI	GCATC	6 cut(s)	559, 907, 1318, 1491, 2083, 2977
MabI	ACCWGGT	1 cut(s)	640
MaeI	CTAG	5 cut(s)	108, 927, 2028, 2240, 2972
MaeII	ACGT	4 cut(s)	143, 548, 1376, 2128
MbiI	CCGCTC	1 cut(s)	2290
MfeI	CAATTG	1 cut(s)	1550
MflI	RGATCY	3 cut(s)	287, 1637, 2305
MhlI	GDGCHC	2 cut(s)	719, 1469
MlsI	TGGCCA	1 cut(s)	1676
MluNI	TGGCCA	1 cut(s)	1676
MlyI	GAGTC	9 cut(s)	460, 1124, 1730, 1891, 2387, 2495, 2539, 2554, 2889
MmeI	TCCRAC	5 cut(s)	69, 126, 470, 1445, 2914
Mox20I	TGGCCA	1 cut(s)	1676
Mph1103I	ATGCAT	1 cut(s)	2098
MroXI	GAANNNNTTC	1 cut(s)	1008
MscI	TGGCCA	1 cut(s)	1676
MslI	CAYNNNNRTG	4 cut(s)	353, 1071, 1271, 2202
Msp20I	TGGCCA	1 cut(s)	1676
MspA1I	CMGCKG	1 cut(s)	242
MspCI	CTTAAG	3 cut(s)	158, 854, 2495
MspI	CCGG	2 cut(s)	1850, 2141
MspR9I	CCNGG	8 cut(s)	642, 1173, 1797, 1806, 1850, 1851, 2142, 2859
MunI	CAATTG	1 cut(s)	1550
Mva1269I	GAATGC	4 cut(s)	163, 482, 937, 1981
MvaI	CCWGG	5 cut(s)	642, 1173, 1797, 1806, 2859
MvnI	CGCG	2 cut(s)	212, 2588
MwoI	GCNNNNNNNGC	6 cut(s)	569, 714, 917, 1250, 1820, 2849
NciI	CCSGG	3 cut(s)	1850, 1851, 2142
NdeI	CATATG	1 cut(s)	726
NlaIV	GGNNCC	7 cut(s)	338, 789, 868, 2068, 2392, 2779, 2799
NmuCI	GTSAC	6 cut(s)	364, 418, 427, 1088, 1924, 2351
NsbI	TGCGCA	1 cut(s)	2736
NsiI	ATGCAT	1 cut(s)	2098
NspI	RCATGY	2 cut(s)	1765, 2017
OliI	CACNNNNGTG	1 cut(s)	1271
PaeI	GCATGC	1 cut(s)	1765
PaeR7I	CTCGAG	1 cut(s)	1712
PaqCI	CACCTGC	1 cut(s)	3016
PciI	ACATGT	1 cut(s)	2013
PctI	GAATGC	4 cut(s)	163, 482, 937, 1981
PdmI	GAANNNNTTC	1 cut(s)	1008
PfeI	GAWTC	6 cut(s)	511, 1076, 2057, 2072, 2293, 2567
Pfl23II	CGTACG	1 cut(s)	207
PflFI	GACNNNGTC	2 cut(s)	393, 656
PflMI	CCANNNNNTGG	1 cut(s)	2570
PfoI	TCCNGGA	2 cut(s)	1795, 2140
PkrI	GCNGC	9 cut(s)	562, 814, 1042, 1243, 1371, 1613, 2590, 2605, 2842
PleI	GAGTC	9 cut(s)	460, 1124, 1729, 1890, 2386, 2494, 2539, 2554, 2888
PpsI	GAGTC	9 cut(s)	460, 1124, 1729, 1890, 2386, 2494, 2539, 2554, 2888
PpuMI	RGGWCCY	2 cut(s)	2778, 2797
PscI	ACATGT	1 cut(s)	2013
PshBI	ATTAAT	1 cut(s)	2712
Psp124BI	GAGCTC	1 cut(s)	719
Psp1406I	AACGTT	1 cut(s)	1376
Psp5II	RGGWCCY	2 cut(s)	2778, 2797
Psp6I	CCWGG	5 cut(s)	640, 1171, 1795, 1804, 2857
PspEI	GGTNACC	1 cut(s)	1924
PspFI	CCCAGC	1 cut(s)	2654
PspGI	CCWGG	5 cut(s)	640, 1171, 1795, 1804, 2857
PspLI	CGTACG	1 cut(s)	207
PspN4I	GGNNCC	7 cut(s)	338, 789, 868, 2068, 2392, 2779, 2799
PspPI	GGNCC	5 cut(s)	788, 1418, 2031, 2778, 2797
PspPPI	RGGWCCY	2 cut(s)	2778, 2797
PstI	CTGCAG	2 cut(s)	979, 2926
PstNI	CAGNNNCTG	2 cut(s)	2309, 2570
PsuI	RGATCY	3 cut(s)	287, 1637, 2305
PsyI	GACNNNGTC	2 cut(s)	393, 656
PvuII	CAGCTG	1 cut(s)	242
RsaI	GTAC	6 cut(s)	209, 1523, 1568, 1728, 2043, 2555
RsaNI	GTAC	6 cut(s)	208, 1522, 1567, 1727, 2042, 2554
RseI	CAYNNNNRTG	4 cut(s)	353, 1071, 1271, 2202
SacI	GAGCTC	1 cut(s)	719
SatI	GCNGC	9 cut(s)	561, 813, 1041, 1242, 1370, 1612, 2589, 2604, 2841
Sau96I	GGNCC	5 cut(s)	788, 1418, 2031, 2778, 2797
SchI	GAGTC	9 cut(s)	460, 1124, 1730, 1891, 2387, 2495, 2539, 2554, 2889
ScrFI	CCNGG	8 cut(s)	642, 1173, 1797, 1806, 1850, 1851, 2142, 2859
SduI	GDGCHC	2 cut(s)	719, 1469
SexAI	ACCWGGT	1 cut(s)	640
SfaNI	GCATC	6 cut(s)	559, 907, 1318, 1491, 2083, 2977
SfcI	CTRYAG	2 cut(s)	975, 2922
Sfr274I	CTCGAG	1 cut(s)	1712
SinI	GGWCC	4 cut(s)	788, 1418, 2778, 2797
SlaI	CTCGAG	1 cut(s)	1712
SmaI	CCCGGG	1 cut(s)	1851
SmiMI	CAYNNNNRTG	4 cut(s)	353, 1071, 1271, 2202
SmlI	CTYRAG	7 cut(s)	158, 329, 854, 1444, 1712, 2324, 2495
SmoI	CTYRAG	7 cut(s)	158, 329, 854, 1444, 1712, 2324, 2495
SpeI	ACTAGT	1 cut(s)	2239
SphI	GCATGC	1 cut(s)	1765
SsiI	CCGC	6 cut(s)	311, 1387, 1539, 2218, 2290, 2588
SspMI	CTAG	5 cut(s)	108, 927, 2028, 2240, 2972
SstI	GAGCTC	1 cut(s)	719
StyD4I	CCNGG	8 cut(s)	640, 1171, 1795, 1804, 1848, 1849, 2140, 2857
TaaI	ACNGT	7 cut(s)	341, 601, 1179, 1270, 1599, 2427, 2457
TaiI	ACGT	4 cut(s)	146, 551, 1379, 2131
TaqI	TCGA	7 cut(s)	75, 353, 464, 1166, 1713, 2007, 2625
TatI	WGTACW	2 cut(s)	1521, 2553
TauI	GCSGC	1 cut(s)	2591
TfiI	GAWTC	6 cut(s)	511, 1076, 2057, 2072, 2293, 2567
TscAI	CASTG	8 cut(s)	373, 1093, 1273, 1569, 1579, 1747, 2280, 2362
TseFI	GTSAC	6 cut(s)	364, 418, 427, 1088, 1924, 2351
TseI	GCWGC	8 cut(s)	560, 812, 1040, 1241, 1369, 1611, 2603, 2840
Tsp45I	GTSAC	6 cut(s)	364, 418, 427, 1088, 1924, 2351
TspGWI	ACGGA	4 cut(s)	402, 1112, 1954, 2843
TspMI	CCCGGG	1 cut(s)	1849
TspRI	CASTG	8 cut(s)	373, 1093, 1273, 1569, 1579, 1747, 2280, 2362
Tth111I	GACNNNGTC	2 cut(s)	393, 656
Van91I	CCANNNNNTGG	1 cut(s)	2570
Vha464I	CTTAAG	3 cut(s)	158, 854, 2495
VpaK11BI	GGWCC	4 cut(s)	788, 1418, 2778, 2797
VspI	ATTAAT	1 cut(s)	2712
XagI	CCTNNNNNAGG	2 cut(s)	1574, 2204
XapI	RAATTY	6 cut(s)	71, 675, 956, 1352, 2158, 2695
XbaI	TCTAGA	1 cut(s)	2971
XceI	RCATGY	2 cut(s)	1765, 2017
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2895
XhoI	CTCGAG	1 cut(s)	1712
XmaI	CCCGGG	1 cut(s)	1849
XmnI	GAANNNNTTC	1 cut(s)	1008
XspI	CTAG	5 cut(s)	108, 927, 2028, 2240, 2972
Zsp2I	ATGCAT	1 cut(s)	2098

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.