Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0003227

Physical Location & Seq

Genomic Coordinates Forward (+)

6576858 .. 6593368

Gene Structure 16511 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G094700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3615 bp

ATGTGGGCGTCACAGAAAATCATCCATGCTCTCGCTCTCCCTCCTGCCTTCTCGTCTTCGTCTCCAGCCCTCGTTTCCGGAACCTTCCTCTTCCTCAGGTCCTCCTCTCCTTCGTACGCATACACAGCCAAACCTCGTTTTCTCTCGCTCTCTTTCTCCTCTTCCATTTCTCCCTCGCATTCAACCATGCCTTACAACCAGAGAAGGGGCGGGCTTAGAGAACAAAAGTGGACAGAAAAACAAAAGACTGACAGCCAACCAACCTCCACAGGGGATTCATCAGCGGCTGCTATGGAAGTTGCCACAAACAGAGTTGGTGGATTGAGTCTCAGTGGAAGCAGTGGGCAGACCAATGCTTCAGTTAAACCCATACAGTTTGGGAAGGTCCAGTCCGTAAATCAGGGTCCAGCCCAAGGTCAGAAAGGAATCTGGATTCCTAAATCATATTCGACAGTCAGTGGAGCTAAGACAATAGAAGTTGAAGCACCTGTTGATAAAAGTACAGTTGGAATCCCGGGCAATGGAGCTGGACAAGCAGCAGATAAAAAAACCAGTGTTGGTTTAAGTAAGTTATTCAAGGGTGACCTGTTGGAAAATTTTACTGTGGACAACTCCACATATGCTCAGGTGCAAGTGCGCGCTACTTTCTATCCCAAATTTGAAAATGAGAAGTCAGATCAGGAGATAAGGACAAGGATGATAGAGATGGTATCTAATGGCTTGGCTACCTTGGAGGTTTCACTTAAACACTCTGGGTCTCTTTTTATGTACGCTGGTAATAAGGGTGGGGCATATGCCAAAAACAGCTTTGGGAATATATATACTGCTGTAGGTGTATTTGTTCTTGGACGGATGTTTCAGGAGGCATGGGGACGTGAAGCAGCAAAAATGCAAGCAGAGTTCAATGATTTTCTTGAGAGGAACCGTGTGTGCATATCAATGGAACTCGTAACTGCTGTTCTAGGAGACCACGGACAGCGCCCTAAGGAAGATTTCGTTGTAGTGACAGCAGTCACAGATTTGGGCAATGGGAAGCCAAAGTTCTACGCAACCCCTGAGATAATTGCTTTCTGTAGAAAATGGCGTCTACCGACAAATCATGTATGGCTGTTCTCAACAAGGAAAGCAGTGACATCATTTTTTGCTGCCTTTGATGCTCTCTGCGAAGAAGGAACTGCAACACCTGTATGCATAGCTCTTAATGAAATCGCAGATATATCTATACCTGGTTCAAAAGATCATGTAAAGGAACAGGGTGAAATCTTAGAGGGTATTGTTGCTCGTATTGTAAGCCAGGAGAGCTCAAAACACATGGAGAAAGTCCTGAACGATTTCCCTCCTCCACCAATGGATGGAGTTGGTCTTGATTTGGGACCTAGTGTAAGGGAGCTTTGTGCTGCAAATAGGTCGAGTGAAAAGCAGCAAATAAAAGCGATTCTTGAGGGTGTTGGCTCCTCTTTTTGCCCTGACCATTCAGACTGGCTTGGAACTGGAGCTGGTGATGCCCATTCCAGAAATGCAGATAATAAATTGGTGCTATCAAAACTTTTACAATCTCATGCTGCTGATTTTTCTACCACCAAATTGCAGGAAATGATTCGTTTGATGAAAGAGAAACGTTATCCTGCTGCCTTTAAATGTTACTATAACTACCACAAAATTGATTCCATATCAAGTGACAACCTTTTCTATAAAATGGTCGTCCATGTCCATAGTGATTCCGCATTTCGACGTTACCAGAAAGAGATGAGGTCAAAGCCAGGATTGTGGCCTTTATATCGAGGTTTTTTTGTTGACATTAATTTATTCAAGGCAAGCAAGGAGAGAGCTGCTGAGATAGCAAAAGACAAAAGTAGCATTGTGGAAGATGTTAGCAGTGATATGCCCGGAAAATATGGATTGGCTGATGAAGATGCAAACTTAATGATAAAATTGAAATTTCTTACATATAAGCTGCGAACCTTTTTGATTCGTAATGGTTTGTCAATTCTTTTTAAAGAAGGTCCAGCTGCTTATAAAGCCTATTACTTGAGGCAAATGAAAGTATGGGGAACTTCAGCAGCAAAGCAGAGGGAACTCAGCAAGATGCTTGATGAATGGGCTGTGTATATACGAAGGAAATGTGGAAACAAACAGCTGTCGTCATCAGTGTACCTCAGTGAGGCTGAGCCTTTTCTTGAACAGTATGCAAAACGCAGTCCACAAAATCAGGCTCTCATAGGATCTGCTGGAAACTTAGTAAGGACTGAAGATTTCTTGGCCATTGTTGAGGGAGGAAGAAACGAAGAAGGTGATCTTGAGAGGGACCTGGAGGTTGCACCATCAAGCCCCCGTGCCTCAGCCAGGGACACCATTCCAAAGGCTGAGGGTCTGATTGTCTTCTTTCCTGGACTACCTGGTTCTGCTAAGTCAGCACTATGCAAGGAACTACTAAATGCCCCAGAAGGAATGGGAGACGATCGGCCAATTCAAAGCCTGATGGGTGACCTTATCAAAGGAAGATATTGGCAGAAGGTTGCTGATGAGCGCAGGAGAAAACCATATTCAATAATGCTTGCAGACAAGAATGCACCAAATGAAGAAGTATGGAGACAGATAGAAGACATGTGCCACAGCACCAGGGCCTCTGCAGTTCCAGTTGTTCCTGATTCTGAAGGAACTGATTCAAATCCGTTTTCGCTTGATGCATTAGCGGTTTTCATGTTTCGGGTGCTTCAACGTGCTAATCATCCGGGAAACCTTGACAAGGAATCTCCAAATGCTGGCTATGTGCTGCTAATGTTCTATCACCTTTATGAGGGCAAGAGTCGCCGGGAGTTTGACGGCGAATTAGTAGAGCGTTTTGGCTCACTTGTCAAGATGCCATTGCTGAAATCTGATAGGAATCCATTGCCCGATCCTGTGAAGTCTATTCTGGAGGAGGGAATAAATCTATACAAGCTTCACACTGCCAAACATGGAAGATTGGAGTCGACAAAGGGAACCTATGCAAAGGAGTGGGCTAAATGGGAGAAACAGTTGCGGGATATTTTATTTGGCAATGCAGAGTATCTTAATTCTGTTCAGGTTCCCTTTGAGTCTGCTGTTAAGGACGTATCAGAACAGCTGAGAAAAATTGCACAAGGTGAGTACAAAACTCCAGATACTGGGAAGAAGAAGTTTGGGGCCATTGTTTTTGCTGCCGTTAGCTTGCCTGTTATGGAAATCAGTGATCTGCTTGATAATTTGGCTGCGAAAAATAGTGAAGCTGGAGCTTTCCTTAAAGAAAAGCATTTGGAGAATCTTAATAAGGCTCATGTTACCCTTGCACATAAGAGAAGTCACGGAGTTACTGCCGTGGCTAGTTATGGCACCTTCCTCCACAAAACGGTCCCTGTGGATCTAACTAAGCTGTTCTTCTCGGATAAAATGGCTGCACTTGAAGCCAGCCTTGGCTCTGTTGAAGGAGAAAGAGTAGTATCGAAGAATGAGTGGCCACATGTTACCTTATGGACTGCAGAAGGGGTTGCAGCAAAGGAGGCCAATAAGTTACCCCAGTTGCATTCAGAGGGAAAGGCTACCTGTATTGCAATTGACCCACCTGCCACCATTGATGGCACGCTGGAATTTTTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000278 GO:0000281 GO:0000394 GO:0000910 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0003972 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006388 GO:0006396 GO:0006399 GO:0006725 GO:0006807 GO:0007049 GO:0007275 GO:0008033 GO:0008150 GO:0008152 GO:0008356 GO:0008380 GO:0008452 GO:0009790 GO:0009791 GO:0009793 GO:0009966 GO:0009987 GO:0010069 GO:0010070 GO:0010154 GO:0010467 GO:0010646 GO:0010928 GO:0016070 GO:0016874 GO:0016886 GO:0022402 GO:0022414 GO:0023051 GO:0032501 GO:0032502 GO:0034470 GO:0034641 GO:0034660 GO:0042245 GO:0043170 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048316 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051301 GO:0061458 GO:0061640 GO:0065007 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

tRNA_lig_CPD

Protein Analysis

1205

Amino Acids

132.98

Weight (kDa)

8.76

Isoelectric Point (pI)

38.56

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003227)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07910 AT1G07910
fragaria_vesca	FvH4_3g33360 FvH4_3g33360 FvH4_3g33360 FvH4_3g33360 FvH4_3g33360 FvH4_3g33360 FvH4_3g33360 FvH4_3g33360 FvH4_4g02320
malus_domestica	MD03G1112400.v1.1 MD11G1129800.v1.1
prunus_persica	Prupe.6G094700_v2.0.a1
pyrus_communis	pycom11g10750 pycom11g10760
rosa_chinensis	RchiOBHm_Chr4g0389641 RchiOBHm_Chr5g0060751
rosa_laevigata	RLG00000009964 RLG00000035390
rosa_multiflora	Rmu_co8520825.1_g000001 Rmu_sc0006568.1_g000004 Rmu_sc0007419.1_g000006
rosa_roxburghii	Rroxscaffold_1G00019960 Rroxscaffold_5G00335630
rosa_rugosa	Rorug03G0324600 Rorug05G0333400
rosa_samantha	Rh4AG029200 Rh4BG022400 Rh4CG031200 Rh4DG022900 Rh5AG396400 Rh5BG408600 Rh5CG433200 Rh5DG423800
rosa_wichuraiana	Rw4G002180 Rw5G037370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2016
AarI	CACCTGC	1 cut(s)	3589
Acc36I	ACCTGC	1 cut(s)	3589
AccB1I	GGYRCC	1 cut(s)	3350
AccB7I	CCANNNNNTGG	3 cut(s)	1352, 2762, 3146
AccI	GTMKAC	2 cut(s)	1087, 2972
AccII	CGCG	1 cut(s)	639
AccIII	TCCGGA	1 cut(s)	77
AciI	CCGC	5 cut(s)	210, 284, 1722, 2693, 3022
AclI	AACGTT	1 cut(s)	1618
AclWI	GGATC	3 cut(s)	2230, 2891, 3387
AcoI	YGGCCR	3 cut(s)	2259, 2462, 3473
AcsI	RAATTY	4 cut(s)	595, 656, 1937, 3605
AcuI	CTGAAG	4 cut(s)	342, 2040, 2268, 2673
AcyI	GRCGYC	2 cut(s)	8, 1084
AdeI	CACNNNGTG	1 cut(s)	3125
AfaI	GTAC	5 cut(s)	116, 502, 770, 2153, 3131
AflIII	ACRYGT	2 cut(s)	2604, 3478
AjiI	CACGTC	1 cut(s)	875
AjnI	CCWGG	8 cut(s)	1225, 1293, 1759, 2307, 2342, 2386, 2395, 2618
AjuI	GAANNNNNNNTTGG	2 cut(s)	3414, 3446
Alw21I	GWGCWC	1 cut(s)	1304
Alw26I	GTCTC	6 cut(s)	66, 332, 762, 960, 2448, 2584
AlwI	GGATC	3 cut(s)	2230, 2891, 3387
AlwNI	CAGNNNCTG	2 cut(s)	287, 3146
Ama87I	CYCGRG	1 cut(s)	514
Aor13HI	TCCGGA	1 cut(s)	77
AoxI	GGCC	7 cut(s)	1769, 2259, 2462, 2622, 3165, 3473, 3519
ApoI	RAATTY	4 cut(s)	595, 656, 1937, 3605
AseI	ATTAAT	1 cut(s)	1800
Asp700I	GAANNNNTTC	3 cut(s)	1331, 1596, 2662
AspLEI	GCGC	4 cut(s)	639, 641, 981, 2529
AspS9I	GGNCC	9 cut(s)	99, 385, 404, 1373, 2003, 2305, 2622, 3165, 3370
AsuC2I	CCSGG	5 cut(s)	515, 516, 1887, 2733, 2813
AsuHPI	GGTGA	7 cut(s)	593, 1268, 1511, 2303, 2495, 2780, 3137
AvaI	CYCGRG	1 cut(s)	514
AvaII	GGWCC	7 cut(s)	99, 385, 404, 1373, 2003, 2305, 3370
AxyI	CCTNAGG	2 cut(s)	95, 984
BalI	TGGCCA	2 cut(s)	2261, 3475
BanI	GGYRCC	1 cut(s)	3350
BanII	GRGCYC	1 cut(s)	1304
BbsI	GAAGAC	3 cut(s)	48, 2371, 2607
Bbv12I	GWGCWC	1 cut(s)	1304
BbvCI	CCTCAGC	2 cut(s)	2338, 2364
BccI	CCATC	5 cut(s)	700, 1346, 2329, 2473, 3587
BceAI	ACGGC	3 cut(s)	2839, 3167, 3320
BcgI	CGANNNNNNTGC	2 cut(s)	1389, 1423
BciT130I	CCWGG	8 cut(s)	1227, 1295, 1761, 2309, 2344, 2388, 2397, 2620
BcnI	CCSGG	5 cut(s)	515, 516, 1887, 2733, 2813
BcoDI	GTCTC	6 cut(s)	66, 332, 762, 960, 2448, 2584
BfaI	CTAG	3 cut(s)	962, 1377, 3342
BfmI	CTRYAG	4 cut(s)	828, 1072, 2628, 3495
BfoI	RGCGCY	1 cut(s)	982
BfuAI	ACCTGC	1 cut(s)	3589
BlpI	GCTNAGC	1 cut(s)	2166
Bme18I	GGWCC	7 cut(s)	99, 385, 404, 1373, 2003, 2305, 3370
BmeT110I	CYCGRG	1 cut(s)	514
BmgBI	CACGTC	1 cut(s)	875
BmgT120I	GGNCC	9 cut(s)	99, 385, 404, 1373, 2003, 2305, 2622, 3165, 3370
BmrI	ACTGGG	2 cut(s)	3156, 3529
BmsI	GCATC	6 cut(s)	1144, 1492, 1903, 2076, 2674, 2850
BmuI	ACTGGG	2 cut(s)	3156, 3529
BoxI	GACNNNNGTC	1 cut(s)	1010
BpiI	GAAGAC	3 cut(s)	48, 2371, 2607
BpmI	CTGGAG	6 cut(s)	48, 1512, 2330, 2936, 3123, 3270
Bpu10I	CCTNAGC	3 cut(s)	624, 2338, 2364
Bpu1102I	GCTNAGC	1 cut(s)	2166
BpuEI	CTTGAG	4 cut(s)	935, 1460, 2050, 2318
BpuMI	CCSGG	5 cut(s)	515, 516, 1887, 2733, 2813
BsaBI	GATNNNNATC	2 cut(s)	2667, 2883
BsaHI	GRCGYC	2 cut(s)	8, 1084
BsaI	GGTCTC	2 cut(s)	762, 960
BsaJI	CCNNGG	8 cut(s)	412, 514, 729, 970, 2343, 2619, 3336, 3430
BsaWI	WCCGGW	1 cut(s)	77
BsaXI	ACNNNNNCTCC	4 cut(s)	3002, 3032, 3438, 3468
Bse1I	ACTGG	7 cut(s)	388, 552, 1484, 1495, 2636, 3151, 3535
Bse21I	CCTNAGG	2 cut(s)	95, 984
Bse3DI	GCAATG	5 cut(s)	526, 1033, 2864, 2888, 3046
Bse8I	GATNNNNATC	2 cut(s)	2667, 2883
BseAI	TCCGGA	1 cut(s)	77
BseBI	CCWGG	8 cut(s)	1227, 1295, 1761, 2309, 2344, 2388, 2397, 2620
BseDI	CCNNGG	8 cut(s)	412, 514, 729, 970, 2343, 2619, 3336, 3430
BseGI	GGATG	5 cut(s)	21, 702, 858, 1357, 2728
BseJI	GATNNNNATC	2 cut(s)	2667, 2883
BseMI	GCAATG	5 cut(s)	526, 1033, 2864, 2888, 3046
BseNI	ACTGG	7 cut(s)	388, 552, 1484, 1495, 2636, 3151, 3535
BsePI	GCGCGC	1 cut(s)	637
BseRI	GAGGAG	5 cut(s)	94, 148, 1329, 1444, 2933
BsgI	GTGCAG	1 cut(s)	3399
Bsh1236I	CGCG	1 cut(s)	639
Bsh1285I	CGRYCG	1 cut(s)	2461
BshFI	GGCC	7 cut(s)	1771, 2261, 2464, 2624, 3167, 3475, 3521
BshNI	GGYRCC	1 cut(s)	3350
BsiEI	CGRYCG	1 cut(s)	2461
BsiHKAI	GWGCWC	1 cut(s)	1304
BsiHKCI	CYCGRG	1 cut(s)	514
BsiSI	CCGG	5 cut(s)	78, 515, 1887, 2732, 2812
BsiWI	CGTACG	1 cut(s)	114
BslFI	GGGAC	5 cut(s)	885, 1386, 2318, 2360, 3356
BsmAI	GTCTC	6 cut(s)	66, 332, 762, 960, 2448, 2584
BsmBI	CGTCTC	2 cut(s)	66, 2448
BsmFI	GGGAC	5 cut(s)	885, 1386, 2318, 2360, 3356
BsmI	GAATGC	3 cut(s)	178, 2572, 3541
BsnI	GGCC	7 cut(s)	1771, 2261, 2464, 2624, 3167, 3475, 3521
Bso31I	GGTCTC	2 cut(s)	762, 960
BsoBI	CYCGRG	1 cut(s)	514
Bsp1286I	GDGCHC	1 cut(s)	1304
Bsp13I	TCCGGA	1 cut(s)	77
Bsp143I	GATC	8 cut(s)	676, 1237, 2222, 2293, 2458, 2896, 3211, 3379
Bsp1720I	GCTNAGC	1 cut(s)	2166
BspACI	CCGC	5 cut(s)	210, 284, 1722, 2693, 3022
BspANI	GGCC	7 cut(s)	1771, 2261, 2464, 2624, 3167, 3475, 3521
BspEI	TCCGGA	1 cut(s)	77
BspFNI	CGCG	1 cut(s)	639
BspMAI	CTGCAG	2 cut(s)	2632, 3499
BspMI	ACCTGC	1 cut(s)	3589
BspPI	GGATC	3 cut(s)	2230, 2891, 3387
BspT107I	GGYRCC	1 cut(s)	3350
BspTNI	GGTCTC	2 cut(s)	762, 960
BsrDI	GCAATG	5 cut(s)	526, 1033, 2864, 2888, 3046
BsrI	ACTGG	7 cut(s)	388, 552, 1484, 1495, 2636, 3151, 3535
BssECI	CCNNGG	8 cut(s)	412, 514, 729, 970, 2343, 2619, 3336, 3430
BssHII	GCGCGC	1 cut(s)	637
BssMI	GATC	8 cut(s)	676, 1237, 2222, 2293, 2458, 2896, 3211, 3379
BssNI	GRCGYC	2 cut(s)	8, 1084
BssT1I	CCWWGG	3 cut(s)	412, 729, 3430
Bst2UI	CCWGG	8 cut(s)	1227, 1295, 1761, 2309, 2344, 2388, 2397, 2620
Bst4CI	ACNGT	8 cut(s)	375, 454, 505, 604, 926, 2184, 3018, 3370
Bst6I	CTCTTC	2 cut(s)	95, 166
BstACI	GRCGYC	2 cut(s)	8, 1084
BstC8I	GCNNGC	9 cut(s)	212, 639, 894, 1816, 2556, 2764, 3191, 3427, 3599
BstDSI	CCRYGG	2 cut(s)	970, 3336
BstEII	GGTNACC	2 cut(s)	581, 2483
BstENI	CCTNNNNNAGG	4 cut(s)	2159, 2341, 2744, 2795
BstF5I	GGATG	5 cut(s)	21, 702, 858, 1357, 2728
BstFNI	CGCG	1 cut(s)	639
BstH2I	RGCGCY	1 cut(s)	982
BstHHI	GCGC	4 cut(s)	639, 641, 981, 2529
BstKTI	GATC	8 cut(s)	679, 1240, 2225, 2296, 2461, 2899, 3214, 3382
BstMAI	GTCTC	6 cut(s)	66, 332, 762, 960, 2448, 2584
BstMBI	GATC	8 cut(s)	676, 1237, 2222, 2293, 2458, 2896, 3211, 3379
BstMCI	CGRYCG	1 cut(s)	2461
BstNI	CCWGG	8 cut(s)	1227, 1295, 1761, 2309, 2344, 2388, 2397, 2620
BstNSI	RCATGY	2 cut(s)	2608, 3482
BstPAI	GACNNNNGTC	1 cut(s)	1010
BstPI	GGTNACC	2 cut(s)	581, 2483
BstSFI	CTRYAG	4 cut(s)	828, 1072, 2628, 3495
BstUI	CGCG	1 cut(s)	639
BstV2I	GAAGAC	3 cut(s)	48, 2371, 2607
BstX2I	RGATCY	2 cut(s)	2222, 3379
BstXI	CCANNNNNNTGG	1 cut(s)	1767
BstYI	RGATCY	2 cut(s)	2222, 3379
Bsu36I	CCTNAGG	2 cut(s)	95, 984
BsuRI	GGCC	7 cut(s)	1771, 2261, 2464, 2624, 3167, 3475, 3521
BtgI	CCRYGG	2 cut(s)	970, 3336
BtrI	CACGTC	1 cut(s)	875
BtsCI	GGATG	5 cut(s)	21, 702, 858, 1357, 2728
BtsI	GCAGTG	4 cut(s)	346, 1134, 1882, 2946
BveI	ACCTGC	1 cut(s)	3589
Cac8I	GCNNGC	9 cut(s)	212, 639, 894, 1816, 2556, 2764, 3191, 3427, 3599
CaiI	CAGNNNCTG	2 cut(s)	287, 3146
CfoI	GCGC	4 cut(s)	639, 641, 981, 2529
Cfr13I	GGNCC	9 cut(s)	99, 385, 404, 1373, 2003, 2305, 2622, 3165, 3370
Cfr9I	CCCGGG	1 cut(s)	514
CseI	GACGC	1 cut(s)	1073
CsiI	ACCWGGT	2 cut(s)	1225, 2395
Csp6I	GTAC	5 cut(s)	115, 501, 769, 2152, 3130
CviQI	GTAC	5 cut(s)	115, 501, 769, 2152, 3130
DpnI	GATC	8 cut(s)	678, 1239, 2224, 2295, 2460, 2898, 3213, 3381
DpnII	GATC	8 cut(s)	676, 1237, 2222, 2293, 2458, 2896, 3211, 3379
DraI	TTTAAA	2 cut(s)	1636, 1996
DraIII	CACNNNGTG	1 cut(s)	3125
EaeI	YGGCCR	3 cut(s)	2259, 2462, 3473
Eam1104I	CTCTTC	2 cut(s)	95, 166
EarI	CTCTTC	2 cut(s)	95, 166
Ecl136II	GAGCTC	1 cut(s)	1302
Eco130I	CCWWGG	3 cut(s)	412, 729, 3430
Eco24I	GRGCYC	1 cut(s)	1304
Eco31I	GGTCTC	2 cut(s)	762, 960
Eco47I	GGWCC	7 cut(s)	99, 385, 404, 1373, 2003, 2305, 3370
Eco53kI	GAGCTC	1 cut(s)	1302
Eco57I	CTGAAG	4 cut(s)	342, 2040, 2268, 2673
Eco81I	CCTNAGG	2 cut(s)	95, 984
Eco88I	CYCGRG	1 cut(s)	514
Eco91I	GGTNACC	2 cut(s)	581, 2483
EcoICRI	GAGCTC	1 cut(s)	1302
EcoNI	CCTNNNNNAGG	4 cut(s)	2159, 2341, 2744, 2795
EcoO109I	RGGNCCY	4 cut(s)	99, 1373, 2305, 2622
EcoO65I	GGTNACC	2 cut(s)	581, 2483
EcoRII	CCWGG	8 cut(s)	1225, 1293, 1759, 2307, 2342, 2386, 2395, 2618
EcoT14I	CCWWGG	3 cut(s)	412, 729, 3430
EcoT22I	ATGCAT	2 cut(s)	1193, 2689
EcoT38I	GRGCYC	1 cut(s)	1304
ErhI	CCWWGG	3 cut(s)	412, 729, 3430
Esp3I	CGTCTC	2 cut(s)	66, 2448
FalI	AAGNNNNNCTT	8 cut(s)	1422, 1454, 2280, 2312, 3380, 3412, 3414, 3446
FaqI	GGGAC	5 cut(s)	885, 1386, 2318, 2360, 3356
FauI	CCCGC	2 cut(s)	203, 3015
FauNDI	CATATG	2 cut(s)	619, 793
FblI	GTMKAC	2 cut(s)	1087, 2972
FokI	GGATG	5 cut(s)	8, 709, 865, 1364, 2715
FriOI	GRGCYC	1 cut(s)	1304
FspBI	CTAG	3 cut(s)	962, 1377, 3342
GlaI	GCGC	4 cut(s)	638, 640, 980, 2528
GsuI	CTGGAG	6 cut(s)	48, 1512, 2330, 2936, 3123, 3270
HaeII	RGCGCY	1 cut(s)	982
HaeIII	GGCC	7 cut(s)	1771, 2261, 2464, 2624, 3167, 3475, 3521
HapII	CCGG	5 cut(s)	78, 515, 1887, 2732, 2812
HgaI	GACGC	1 cut(s)	1073
HhaI	GCGC	4 cut(s)	639, 641, 981, 2529
Hin1I	GRCGYC	2 cut(s)	8, 1084
Hin6I	GCGC	4 cut(s)	637, 639, 979, 2527
HinP1I	GCGC	4 cut(s)	637, 639, 979, 2527
HincII	GTYRAC	2 cut(s)	1795, 2973
HindII	GTYRAC	2 cut(s)	1795, 2973
HindIII	AAGCTT	1 cut(s)	2939
HpaII	CCGG	5 cut(s)	78, 515, 1887, 2732, 2812
HphI	GGTGA	7 cut(s)	593, 1268, 1511, 2303, 2495, 2780, 3137
Hpy166II	GTNNAC	7 cut(s)	231, 607, 1088, 1795, 2152, 2201, 2973
Hpy8I	GTNNAC	7 cut(s)	231, 607, 1088, 1795, 2152, 2201, 2973
Hpy99I	CGWCG	1 cut(s)	1734
HpyCH4III	ACNGT	8 cut(s)	375, 454, 505, 604, 926, 2184, 3018, 3370
HpyCH4IV	ACGT	5 cut(s)	874, 1618, 1732, 2719, 3093
HpySE526I	ACGT	5 cut(s)	874, 1618, 1732, 2719, 3093
Hsp92I	GRCGYC	2 cut(s)	8, 1084
HspAI	GCGC	4 cut(s)	637, 639, 979, 2527
Kpn2I	TCCGGA	1 cut(s)	77
Kzo9I	GATC	8 cut(s)	676, 1237, 2222, 2293, 2458, 2896, 3211, 3379
LmnI	GCTCC	6 cut(s)	461, 524, 1387, 1457, 1493, 3251
LweI	GCATC	6 cut(s)	1144, 1492, 1903, 2076, 2674, 2850
MabI	ACCWGGT	2 cut(s)	1225, 2395
MaeI	CTAG	3 cut(s)	962, 1377, 3342
MaeII	ACGT	5 cut(s)	874, 1618, 1732, 2719, 3093
MalI	GATC	8 cut(s)	678, 1239, 2224, 2295, 2460, 2898, 3213, 3381
MboI	GATC	8 cut(s)	676, 1237, 2222, 2293, 2458, 2896, 3211, 3379
MfeI	CAATTG	1 cut(s)	3570
MflI	RGATCY	2 cut(s)	2222, 3379
MhlI	GDGCHC	1 cut(s)	1304
MlsI	TGGCCA	2 cut(s)	2261, 3475
MluNI	TGGCCA	2 cut(s)	2261, 3475
MlyI	GAGTC	4 cut(s)	334, 2815, 2978, 3086
MmeI	TCCRAC	2 cut(s)	487, 570
Mox20I	TGGCCA	2 cut(s)	2261, 3475
Mph1103I	ATGCAT	2 cut(s)	1193, 2689
MroI	TCCGGA	1 cut(s)	77
MroXI	GAANNNNTTC	3 cut(s)	1331, 1596, 2662
MscI	TGGCCA	2 cut(s)	2261, 3475
MslI	CAYNNNNRTG	3 cut(s)	938, 1186, 2793
Msp20I	TGGCCA	2 cut(s)	2261, 3475
MspA1I	CMGCKG	4 cut(s)	284, 2009, 2137, 3106
MspI	CCGG	5 cut(s)	78, 515, 1887, 2732, 2812
MunI	CAATTG	1 cut(s)	3570
Mva1269I	GAATGC	3 cut(s)	178, 2572, 3541
MvaI	CCWGG	8 cut(s)	1227, 1295, 1761, 2309, 2344, 2388, 2397, 2620
MvnI	CGCG	1 cut(s)	639
NciI	CCSGG	5 cut(s)	515, 516, 1887, 2733, 2813
NdeI	CATATG	2 cut(s)	619, 793
NdeII	GATC	8 cut(s)	676, 1237, 2222, 2293, 2458, 2896, 3211, 3379
NmuCI	GTSAC	8 cut(s)	9, 581, 1003, 1012, 1129, 1676, 2483, 3320
NsiI	ATGCAT	2 cut(s)	1193, 2689
NspI	RCATGY	2 cut(s)	2608, 3482
PaqCI	CACCTGC	1 cut(s)	3589
PauI	GCGCGC	1 cut(s)	637
PciI	ACATGT	2 cut(s)	2604, 3478
PctI	GAATGC	3 cut(s)	178, 2572, 3541
PdmI	GAANNNNTTC	3 cut(s)	1331, 1596, 2662
Pfl23II	CGTACG	1 cut(s)	114
PflMI	CCANNNNNTGG	3 cut(s)	1352, 2762, 3146
PfoI	TCCNGGA	2 cut(s)	2386, 2731
Ple19I	CGATCG	1 cut(s)	2461
PleI	GAGTC	4 cut(s)	333, 2814, 2977, 3085
PpsI	GAGTC	4 cut(s)	333, 2814, 2977, 3085
PpuMI	RGGWCCY	3 cut(s)	99, 1373, 2305
PscI	ACATGT	2 cut(s)	2604, 3478
PshAI	GACNNNNGTC	1 cut(s)	1010
PshBI	ATTAAT	1 cut(s)	1800
PsiI	TTATAA	1 cut(s)	2016
Psp124BI	GAGCTC	1 cut(s)	1304
Psp1406I	AACGTT	1 cut(s)	1618
Psp5II	RGGWCCY	3 cut(s)	99, 1373, 2305
Psp6I	CCWGG	8 cut(s)	1225, 1293, 1759, 2307, 2342, 2386, 2395, 2618
PspEI	GGTNACC	2 cut(s)	581, 2483
PspGI	CCWGG	8 cut(s)	1225, 1293, 1759, 2307, 2342, 2386, 2395, 2618
PspLI	CGTACG	1 cut(s)	114
PspPI	GGNCC	9 cut(s)	99, 385, 404, 1373, 2003, 2305, 2622, 3165, 3370
PspPPI	RGGWCCY	3 cut(s)	99, 1373, 2305
PsrI	GAACNNNNNNTAC	2 cut(s)	942, 974
PstI	CTGCAG	2 cut(s)	2632, 3499
PstNI	CAGNNNCTG	2 cut(s)	287, 3146
PsuI	RGATCY	2 cut(s)	2222, 3379
PteI	GCGCGC	1 cut(s)	637
PvuI	CGATCG	1 cut(s)	2461
PvuII	CAGCTG	3 cut(s)	2009, 2137, 3106
RsaI	GTAC	5 cut(s)	116, 502, 770, 2153, 3131
RsaNI	GTAC	5 cut(s)	115, 501, 769, 2152, 3130
RseI	CAYNNNNRTG	3 cut(s)	938, 1186, 2793
SacI	GAGCTC	1 cut(s)	1304
SalI	GTCGAC	1 cut(s)	2971
Sau3AI	GATC	8 cut(s)	676, 1237, 2222, 2293, 2458, 2896, 3211, 3379
Sau96I	GGNCC	9 cut(s)	99, 385, 404, 1373, 2003, 2305, 2622, 3165, 3370
SchI	GAGTC	4 cut(s)	334, 2815, 2978, 3086
SduI	GDGCHC	1 cut(s)	1304
SexAI	ACCWGGT	2 cut(s)	1225, 2395
SfaNI	GCATC	6 cut(s)	1144, 1492, 1903, 2076, 2674, 2850
SfcI	CTRYAG	4 cut(s)	828, 1072, 2628, 3495
SinI	GGWCC	7 cut(s)	99, 385, 404, 1373, 2003, 2305, 3370
SmaI	CCCGGG	1 cut(s)	516
SmiMI	CAYNNNNRTG	3 cut(s)	938, 1186, 2793
SmlI	CTYRAG	4 cut(s)	914, 1439, 2029, 2297
SmoI	CTYRAG	4 cut(s)	914, 1439, 2029, 2297
SsiI	CCGC	5 cut(s)	210, 284, 1722, 2693, 3022
SspMI	CTAG	3 cut(s)	962, 1377, 3342
SstI	GAGCTC	1 cut(s)	1304
StyI	CCWWGG	3 cut(s)	412, 729, 3430
TaaI	ACNGT	8 cut(s)	375, 454, 505, 604, 926, 2184, 3018, 3370
TaiI	ACGT	5 cut(s)	877, 1621, 1735, 2722, 3096
TaqI	TCGA	6 cut(s)	449, 1409, 1729, 1780, 2972, 3461
TatI	WGTACW	2 cut(s)	500, 3129
TauI	GCSGC	1 cut(s)	287
TseFI	GTSAC	8 cut(s)	9, 581, 1003, 1012, 1129, 1676, 2483, 3320
Tsp45I	GTSAC	8 cut(s)	9, 581, 1003, 1012, 1129, 1676, 2483, 3320
TspDTI	ATGAA	8 cut(s)	267, 1218, 1622, 1923, 2054, 2109, 2592, 2689
TspGWI	ACGGA	5 cut(s)	382, 865, 987, 2661, 3339
TspMI	CCCGGG	1 cut(s)	514
Van91I	CCANNNNNTGG	3 cut(s)	1352, 2762, 3146
VpaK11BI	GGWCC	7 cut(s)	99, 385, 404, 1373, 2003, 2305, 3370
VspI	ATTAAT	1 cut(s)	1800
XagI	CCTNNNNNAGG	4 cut(s)	2159, 2341, 2744, 2795
XapI	RAATTY	4 cut(s)	595, 656, 1937, 3605
XceI	RCATGY	2 cut(s)	2608, 3482
XmaI	CCCGGG	1 cut(s)	514
XmiI	GTMKAC	2 cut(s)	1087, 2972
XmnI	GAANNNNTTC	3 cut(s)	1331, 1596, 2662
XspI	CTAG	3 cut(s)	962, 1377, 3342
Zsp2I	ATGCAT	2 cut(s)	1193, 2689

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.