Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007419.1

Orthogroup ID

OG0003227

Physical Location & Seq

Genomic Coordinates Forward (+)

27086 .. 32087

Gene Structure 5002 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007419.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3240 bp

atgaagagggagcttcgccggctgcctgtgtttggcggaaggagcttcaattttctctccctcctcctttctcaatccgattacgaaagcaagggtccagtaaaaggtcaaaggggaatttggaaaagccgaaatcttgttgctgcggcggcggtggaagaaagaacttctggtgcaagcaacttgttgatggataatttaatggaaaagtttagtgtagacgactcgacgtatgctcaggtgcaagtccgagctactttctatcccaagtttgagaatgagaagtccgatcaggaggttaggacaaggatgatagagttggtgtcgaaagggttggctacattggaggtttccctcaagcactcggggtcactttttatgtatgctggtagtgagggtggtgcgtatgcgaaaaatagctttgggaatatatatactgctgtgggtgtgtttgttctggggaggatgtttcgtgaggcgtggggatcagaagcagcaaggatgcaagcagagtttaatgattttcttgagaggaaccgtatgtgtatatcaatggaacttgtgactgctgttctaggagatcatggacagcgtccgaaagaagattttgttgtggtcacggccgtcacggagttgggcaatgggaagccaaagttctactcaactcccgagattattgcattctgtcggaattggcgcctgcccacaaatcatgtatggctgttctcaacaaggaaagcagtgacatctttttttgctgcttttgatgccctgtctgaagaaggaactgcaacaagtgtatgcagagctcttgatgaagttgcagatatatctataccaggttccaaagatcacatcaaggtgcaaggtgaaatcttagagggtattgttgctcgtattgtaagccatgagagctcaaagcatatggagaaagtcttaaaagatttccctcctccaccaatggaaggagctggtcttgatttgggaccaagcctaagggagatttgcgctgcaaataggtctgatgaaacacagcaaataaaagcacttcttaagggtgtcggctcctctttttgtcctgaccattcagactggcttgggcctggagctggtgatgcacattctaaaaatgtagatcaatcagtgctatcaaaatttttaaaatctcatcctgctgatttttctaccaccaaattgcaggaagtggtttgtttgatgagagaaaagcgtttacctgctgcctttaaatgctaccagaactaccacaagcatgattccatgtccagtgacaacgttttctataaaatggtcattcatgtccgtagcgactctgcatttcagcggtatcagaaagagatgaagtcaaagccaggactgtggcctttatatcgaggttttttcgttgacattaatttgttcaaggcaaacaaggagagagctgctgagattgcaaaaaacaaaagcactgttgtggacataaatgggggctgtggtatgtcaggaaaacatggattggcggaagaagatgcaaacttaatgatcaaattgaaatttcttacatataagctgcgaacttttttgatccgcaatggtttatcaactctatttaaacaaggtccggctgcttataaagcctattacttgaggcaaatgaaaatatggggcacttcagcaggaaagcagagggaactcagcaagatgcttgatgaatgggctgtgtacatacgaaggaaatgtggaaacaaacacatgtcgtcatcagtgtacctcagcgaggctgagcctttccttgaacagtatgcaaaacgtagcccacagaatcaggctcttataggatctgccggaaacttggtaaatgctgaaaacttcttggccatagttgagggaggaatagatgaagagggtgatctcgagaaggagtctgtaccatcaagccccagtgcctcagttgcagacaccattccaaaggctgagggtctgattgtattctttcctggactacctggttctgccaagtcagcactatgcaaggaactactcaaagccccgggaggatttggggatgatcggccagttcaaagtctaatgggtgatcttgttaaaggaaaatattggcagaaggtcgctgatcagtgcaggaaaaaaccatattctataatgctcgcagacaagaatgcaccaaacgtagaagtgtggagacaggtcgaagacatgtgccacagaacaagggcctctgctgtaccagttgttcctgattctgaaggaactgaatcaaatccgttttctcttgacgcattagcggttttcatgtttcgtgtgcttcaacgttctaatcatccgggaaaccttgacaaaaattcaccgaatgctggctatgttctgctaatgttctatcacctttatgagggcaagactcggagagaatttgagtctgaactagttgagcgttttggttcacttgtcaaaataccactgctgacatcggagaggaatccattaccggatcctgtgaaatcaactcttgaggatggaataaatttatacaaccttcacactgatagacatggaagatgggattcaagcaggggagcctacacaaaggagtgggctaaatgggagaaacagttgcgagaggttttgtttggcaatgcacggtattttaattctgttcaagttccctttgagtcttctgttaaggaagtatcagaacagctaagaaagattgcaaaaggtgagtataagactccagagtacaggacttcagattctgggaagaggaagatctcggccattacatttgctgccatcaacctgcctattaccgatatcaaaggtttgcttgataatttggctgggaaagatagtaaagtcgaagcttttctaaaagacaagaatttggagaacagcattaataaggctcatgttactcttgcgcacaagagaagtcatggtgttactgccgtggctaattatggcaccttcctacacaaacaggtccctgtggatataactgcacttctcttcacggataaaatggctgcattcgaagcttgccctggctctgttgaaggtgaaagagtcacccccaaaaatgaatggcctcatgttaccttatggacagcagagggtgttttagccaaggaggcccacttgttaagcaatttgcatttagagggcaaggctacctgtattgcgattgacccacctgccaccattcatgggacgctggagttttactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000278 GO:0000281 GO:0000394 GO:0000910 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0003972 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006388 GO:0006396 GO:0006399 GO:0006725 GO:0006807 GO:0007049 GO:0007275 GO:0008033 GO:0008150 GO:0008152 GO:0008356 GO:0008380 GO:0008452 GO:0009790 GO:0009791 GO:0009793 GO:0009966 GO:0009987 GO:0010069 GO:0010070 GO:0010154 GO:0010467 GO:0010646 GO:0010928 GO:0016070 GO:0016874 GO:0016886 GO:0022402 GO:0022414 GO:0023051 GO:0032501 GO:0032502 GO:0034470 GO:0034641 GO:0034660 GO:0042245 GO:0043170 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048316 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051301 GO:0061458 GO:0061640 GO:0065007 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

tRNA_lig_CPD

Protein Analysis

1079

Amino Acids

120.25

Weight (kDa)

8.74

Isoelectric Point (pI)

36.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003227)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07910 AT1G07910
fragaria_vesca	FvH4_3g33360 FvH4_3g33360 FvH4_3g33360 FvH4_3g33360 FvH4_3g33360 FvH4_3g33360 FvH4_3g33360 FvH4_3g33360 FvH4_4g02320
malus_domestica	MD03G1112400.v1.1 MD11G1129800.v1.1
prunus_persica	Prupe.6G094700_v2.0.a1
pyrus_communis	pycom11g10750 pycom11g10760
rosa_chinensis	RchiOBHm_Chr4g0389641 RchiOBHm_Chr5g0060751
rosa_laevigata	RLG00000009964 RLG00000035390
rosa_multiflora	Rmu_co8520825.1_g000001 Rmu_sc0006568.1_g000004 Rmu_sc0007419.1_g000006
rosa_roxburghii	Rroxscaffold_1G00019960 Rroxscaffold_5G00335630
rosa_rugosa	Rorug03G0324600 Rorug05G0333400
rosa_samantha	Rh4AG029200 Rh4BG022400 Rh4CG031200 Rh4DG022900 Rh5AG396400 Rh5BG408600 Rh5CG433200 Rh5DG423800
rosa_wichuraiana	Rw4G002180 Rw5G037370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1629
AarI	CACCTGC	1 cut(s)	3214
Acc16I	TGCGCA	1 cut(s)	2934
Acc36I	ACCTGC	3 cut(s)	1243, 2820, 3214
AccB1I	GGYRCC	2 cut(s)	696, 2975
AccI	GTMKAC	1 cut(s)	219
AciI	CCGC	8 cut(s)	36, 146, 149, 152, 1342, 1517, 1585, 2300
AclI	AACGTT	2 cut(s)	1293, 2326
AclWI	GGATC	5 cut(s)	493, 1576, 1843, 2498, 2511
AcoI	YGGCCR	4 cut(s)	621, 1872, 2069, 2787
AcsI	RAATTY	7 cut(s)	117, 1154, 1550, 2356, 2423, 2536, 2893
AcuI	CTGAAG	4 cut(s)	798, 1653, 2280, 2745
AcyI	GRCGYC	1 cut(s)	697
AfaI	GTAC	5 cut(s)	1721, 1766, 1926, 2241, 2753
AfiI	CCNNNNNNNGG	8 cut(s)	32, 104, 965, 1109, 1774, 2369, 2404, 3219
AflII	CTTAAG	1 cut(s)	1052
AflIII	ACRYGT	2 cut(s)	1749, 2211
AgsI	TTSAA	9 cut(s)	49, 1420, 1549, 1793, 2078, 2324, 2580, 2672, 3068
AhlI	ACTAGT	1 cut(s)	2437
AjnI	CCWGG	6 cut(s)	838, 1102, 1369, 1993, 2002, 3055
AleI	CACNNNNGTG	1 cut(s)	1469
Alw21I	GWGCWC	2 cut(s)	811, 917
Alw26I	GTCTC	1 cut(s)	2191
AlwI	GGATC	5 cut(s)	493, 1576, 1843, 2498, 2511
AlwNI	CAGNNNCTG	1 cut(s)	2768
Ama87I	CYCGRG	4 cut(s)	364, 668, 1910, 2047
AoxI	GGCC	9 cut(s)	621, 1100, 1379, 1872, 2069, 2229, 2787, 3098, 3144
ApoI	RAATTY	7 cut(s)	117, 1154, 1550, 2356, 2423, 2536, 2893
AseI	ATTAAT	2 cut(s)	1410, 2910
Asp700I	GAANNNNTTC	1 cut(s)	2877
AspLEI	GCGC	3 cut(s)	699, 1010, 2935
AspS9I	GGNCC	7 cut(s)	95, 986, 1100, 1616, 2229, 2995, 3145
AsuC2I	CCSGG	3 cut(s)	2048, 2049, 2340
AsuHPI	GGTGA	9 cut(s)	881, 1124, 1916, 2102, 2352, 2387, 2744, 3073, 3083
AsuII	TTCGAA	1 cut(s)	3045
AvaI	CYCGRG	4 cut(s)	364, 668, 1910, 2047
AvaII	GGWCC	4 cut(s)	95, 986, 1616, 2995
AxyI	CCTNAGG	1 cut(s)	995
BaeGI	GKGCMC	1 cut(s)	1667
BalI	TGGCCA	1 cut(s)	1874
BamHI	GGATCC	1 cut(s)	2503
BanI	GGYRCC	2 cut(s)	696, 2975
BanII	GRGCYC	2 cut(s)	811, 917
BbsI	GAAGAC	2 cut(s)	2214, 2679
Bbv12I	GWGCWC	2 cut(s)	811, 917
BbvCI	CCTCAGC	2 cut(s)	1769, 1971
BccI	CCATC	5 cut(s)	184, 1936, 2522, 2565, 2813
BceAI	ACGGC	3 cut(s)	608, 636, 2945
BcgI	CGANNNNNNTGC	2 cut(s)	659, 693
BciT130I	CCWGG	6 cut(s)	840, 1104, 1371, 1995, 2004, 3057
BclI	TGATCA	2 cut(s)	1539, 2128
BcnI	CCSGG	3 cut(s)	2048, 2049, 2340
BcoDI	GTCTC	1 cut(s)	2191
BcuI	ACTAGT	1 cut(s)	2437
BfaI	CTAG	2 cut(s)	575, 2438
BfoI	RGCGCY	1 cut(s)	700
BfrI	CTTAAG	1 cut(s)	1052
BfuAI	ACCTGC	3 cut(s)	1243, 2820, 3214
BglI	GCCNNNNNGGC	1 cut(s)	3143
BglII	AGATCT	1 cut(s)	2781
BlpI	GCTNAGC	1 cut(s)	1779
Bme1390I	CCNGG	9 cut(s)	840, 1104, 1371, 1995, 2004, 2048, 2049, 2340, 3057
Bme18I	GGWCC	4 cut(s)	95, 986, 1616, 2995
BmeT110I	CYCGRG	4 cut(s)	364, 668, 1910, 2047
BmgT120I	GGNCC	7 cut(s)	95, 986, 1100, 1616, 2229, 2995, 3145
BmrFI	CCNGG	9 cut(s)	840, 1104, 1371, 1995, 2004, 2048, 2049, 2340, 3057
BmrI	ACTGGG	1 cut(s)	1932
BmsI	GCATC	5 cut(s)	492, 757, 1105, 1516, 1689
BmuI	ACTGGG	1 cut(s)	1932
BpiI	GAAGAC	2 cut(s)	2214, 2679
BpmI	CTGGAG	2 cut(s)	1125, 2730
Bpu10I	CCTNAGC	3 cut(s)	237, 1769, 1971
Bpu1102I	GCTNAGC	1 cut(s)	1779
Bpu14I	TTCGAA	1 cut(s)	3045
BpuEI	CTTGAG	4 cut(s)	341, 548, 1663, 2543
BpuMI	CCSGG	3 cut(s)	2048, 2049, 2340
BsaHI	GRCGYC	1 cut(s)	697
BsaJI	CCNNGG	5 cut(s)	2046, 2047, 2961, 3055, 3138
BsaWI	WCCGGW	1 cut(s)	2500
BsaXI	ACNNNNNCTCC	2 cut(s)	2609, 2639
Bsc4I	CCNNNNNNNGG	8 cut(s)	32, 104, 965, 1109, 1774, 2369, 2404, 3219
Bse118I	RCCGGY	1 cut(s)	18
Bse1I	ACTGG	6 cut(s)	98, 1097, 1284, 1938, 2072, 2243
Bse21I	CCTNAGG	1 cut(s)	995
Bse3DI	GCAATG	3 cut(s)	646, 1594, 2653
BseBI	CCWGG	6 cut(s)	840, 1104, 1371, 1995, 2004, 3057
BseDI	CCNNGG	5 cut(s)	2046, 2047, 2961, 3055, 3138
BseGI	GGATG	7 cut(s)	315, 471, 507, 1168, 2068, 2335, 2533
BseLI	CCNNNNNNNGG	8 cut(s)	32, 104, 965, 1109, 1774, 2369, 2404, 3219
BseMI	GCAATG	3 cut(s)	646, 1594, 2653
BseMII	CTCAG	7 cut(s)	251, 1434, 1705, 1770, 1783, 1959, 1962
BseNI	ACTGG	6 cut(s)	98, 1097, 1284, 1938, 2072, 2243
BseRI	GAGGAG	3 cut(s)	53, 942, 1057
BseSI	GKGCMC	1 cut(s)	1667
BseX3I	CGGCCG	1 cut(s)	621
BseYI	CCCAGC	1 cut(s)	2852
BsgI	GTGCAG	2 cut(s)	2155, 2997
Bsh1285I	CGRYCG	1 cut(s)	624
BshFI	GGCC	9 cut(s)	623, 1102, 1381, 1874, 2071, 2231, 2789, 3100, 3146
BshNI	GGYRCC	2 cut(s)	696, 2975
BsiEI	CGRYCG	1 cut(s)	624
BsiHKAI	GWGCWC	2 cut(s)	811, 917
BsiHKCI	CYCGRG	4 cut(s)	364, 668, 1910, 2047
BsiSI	CCGG	6 cut(s)	19, 1619, 1842, 2048, 2339, 2501
BslFI	GGGAC	3 cut(s)	999, 2981, 3235
BslI	CCNNNNNNNGG	8 cut(s)	32, 104, 965, 1109, 1774, 2369, 2404, 3219
BsmAI	GTCTC	1 cut(s)	2191
BsmFI	GGGAC	3 cut(s)	999, 2981, 3235
BsmI	GAATGC	4 cut(s)	680, 2179, 2371, 3041
BsnI	GGCC	9 cut(s)	623, 1102, 1381, 1874, 2071, 2231, 2789, 3100, 3146
BsoBI	CYCGRG	4 cut(s)	364, 668, 1910, 2047
Bsp119I	TTCGAA	1 cut(s)	3045
Bsp1286I	GDGCHC	3 cut(s)	811, 917, 1667
Bsp1407I	TGTACA	1 cut(s)	1719
Bsp1720I	GCTNAGC	1 cut(s)	1779
BspACI	CCGC	8 cut(s)	36, 146, 149, 152, 1342, 1517, 1585, 2300
BspANI	GGCC	9 cut(s)	623, 1102, 1381, 1874, 2071, 2231, 2789, 3100, 3146
BspCNI	CTCAG	7 cut(s)	250, 1435, 1704, 1771, 1782, 1958, 1963
BspMI	ACCTGC	3 cut(s)	1243, 2820, 3214
BspPI	GGATC	5 cut(s)	493, 1576, 1843, 2498, 2511
BspT104I	TTCGAA	1 cut(s)	3045
BspT107I	GGYRCC	2 cut(s)	696, 2975
BspTI	CTTAAG	1 cut(s)	1052
BsrDI	GCAATG	3 cut(s)	646, 1594, 2653
BsrFI	RCCGGY	1 cut(s)	18
BsrGI	TGTACA	1 cut(s)	1719
BsrI	ACTGG	6 cut(s)	98, 1097, 1284, 1938, 2072, 2243
BssAI	RCCGGY	1 cut(s)	18
BssECI	CCNNGG	5 cut(s)	2046, 2047, 2961, 3055, 3138
BssNI	GRCGYC	1 cut(s)	697
BssT1I	CCWWGG	1 cut(s)	3138
Bst2UI	CCWGG	6 cut(s)	840, 1104, 1371, 1995, 2004, 3057
Bst4CI	ACNGT	6 cut(s)	539, 1377, 1468, 1797, 2625, 2655
Bst6I	CTCTTC	3 cut(s)	1893, 2768, 3026
BstACI	GRCGYC	1 cut(s)	697
BstAFI	CTTAAG	1 cut(s)	1052
BstAUI	TGTACA	1 cut(s)	1719
BstBI	TTCGAA	1 cut(s)	3045
BstC8I	GCNNGC	7 cut(s)	20, 178, 507, 701, 2163, 2371, 3052
BstDSI	CCRYGG	1 cut(s)	2961
BstENI	CCTNNNNNAGG	2 cut(s)	1772, 2402
BstF5I	GGATG	7 cut(s)	315, 471, 507, 1168, 2068, 2335, 2533
BstH2I	RGCGCY	1 cut(s)	700
BstHHI	GCGC	3 cut(s)	699, 1010, 2935
BstMAI	GTCTC	1 cut(s)	2191
BstMCI	CGRYCG	1 cut(s)	624
BstNI	CCWGG	6 cut(s)	840, 1104, 1371, 1995, 2004, 3057
BstNSI	RCATGY	2 cut(s)	1753, 2215
BstSCI	CCNGG	9 cut(s)	838, 1102, 1369, 1993, 2002, 2046, 2047, 2338, 3055
BstSLI	GKGCMC	1 cut(s)	1667
BstV2I	GAAGAC	2 cut(s)	2214, 2679
BstX2I	RGATCY	3 cut(s)	1835, 2503, 2781
BstXI	CCANNNNNNTGG	1 cut(s)	1377
BstYI	RGATCY	3 cut(s)	1835, 2503, 2781
BstZI	CGGCCG	1 cut(s)	621
Bsu36I	CCTNAGG	1 cut(s)	995
BsuRI	GGCC	9 cut(s)	623, 1102, 1381, 1874, 2071, 2231, 2789, 3100, 3146
BtgI	CCRYGG	1 cut(s)	2961
BtsCI	GGATG	7 cut(s)	315, 471, 507, 1168, 2068, 2335, 2533
BtsI	GCAGTG	2 cut(s)	747, 2471
BtsIMutI	CAGTG	9 cut(s)	747, 1149, 1291, 1464, 1767, 1945, 2138, 2471, 2553
BveI	ACCTGC	3 cut(s)	1243, 2820, 3214
Cac8I	GCNNGC	7 cut(s)	20, 178, 507, 701, 2163, 2371, 3052
CaiI	CAGNNNCTG	1 cut(s)	2768
CfoI	GCGC	3 cut(s)	699, 1010, 2935
Cfr10I	RCCGGY	1 cut(s)	18
Cfr13I	GGNCC	7 cut(s)	95, 986, 1100, 1616, 2229, 2995, 3145
Cfr9I	CCCGGG	1 cut(s)	2047
CseI	GACGC	3 cut(s)	581, 2300, 3232
CsiI	ACCWGGT	2 cut(s)	838, 2002
Csp6I	GTAC	5 cut(s)	1720, 1765, 1925, 2240, 2752
CviQI	GTAC	5 cut(s)	1720, 1765, 1925, 2240, 2752
DinI	GGCGCC	1 cut(s)	698
DraI	TTTAAA	3 cut(s)	1161, 1246, 1609
EaeI	YGGCCR	4 cut(s)	621, 1872, 2069, 2787
EagI	CGGCCG	1 cut(s)	621
Eam1104I	CTCTTC	3 cut(s)	1893, 2768, 3026
EarI	CTCTTC	3 cut(s)	1893, 2768, 3026
EciI	GGCGGA	2 cut(s)	51, 1532
Ecl136II	GAGCTC	2 cut(s)	809, 915
EclXI	CGGCCG	1 cut(s)	621
Eco130I	CCWWGG	1 cut(s)	3138
Eco24I	GRGCYC	2 cut(s)	811, 917
Eco32I	GATATC	1 cut(s)	2827
Eco47I	GGWCC	4 cut(s)	95, 986, 1616, 2995
Eco52I	CGGCCG	1 cut(s)	621
Eco53kI	GAGCTC	2 cut(s)	809, 915
Eco57I	CTGAAG	4 cut(s)	798, 1653, 2280, 2745
Eco81I	CCTNAGG	1 cut(s)	995
Eco88I	CYCGRG	4 cut(s)	364, 668, 1910, 2047
EcoICRI	GAGCTC	2 cut(s)	809, 915
EcoNI	CCTNNNNNAGG	2 cut(s)	1772, 2402
EcoO109I	RGGNCCY	2 cut(s)	2229, 2995
EcoRII	CCWGG	6 cut(s)	838, 1102, 1369, 1993, 2002, 3055
EcoRV	GATATC	1 cut(s)	2827
EcoT14I	CCWWGG	1 cut(s)	3138
EcoT38I	GRGCYC	2 cut(s)	811, 917
EgeI	GGCGCC	1 cut(s)	698
EheI	GGCGCC	1 cut(s)	698
ErhI	CCWWGG	1 cut(s)	3138
FalI	AAGNNNNNCTT	4 cut(s)	1035, 1067, 2823, 2855
FaqI	GGGAC	3 cut(s)	999, 2981, 3235
FauNDI	CATATG	1 cut(s)	924
FbaI	TGATCA	2 cut(s)	1539, 2128
FblI	GTMKAC	1 cut(s)	219
FokI	GGATG	7 cut(s)	322, 478, 514, 1155, 2075, 2322, 2540
FriOI	GRGCYC	2 cut(s)	811, 917
FspBI	CTAG	2 cut(s)	575, 2438
FspI	TGCGCA	1 cut(s)	2934
GlaI	GCGC	3 cut(s)	698, 1009, 2934
GsaI	CCCAGC	1 cut(s)	2856
GsuI	CTGGAG	2 cut(s)	1125, 2730
HaeII	RGCGCY	1 cut(s)	700
HaeIII	GGCC	9 cut(s)	623, 1102, 1381, 1874, 2071, 2231, 2789, 3100, 3146
HapII	CCGG	6 cut(s)	19, 1619, 1842, 2048, 2339, 2501
HgaI	GACGC	3 cut(s)	581, 2300, 3232
HhaI	GCGC	3 cut(s)	699, 1010, 2935
Hin1I	GRCGYC	1 cut(s)	697
Hin6I	GCGC	3 cut(s)	697, 1008, 2933
HinP1I	GCGC	3 cut(s)	697, 1008, 2933
HincII	GTYRAC	1 cut(s)	1405
HindII	GTYRAC	1 cut(s)	1405
HindIII	AAGCTT	2 cut(s)	2874, 3048
HpaII	CCGG	6 cut(s)	19, 1619, 1842, 2048, 2339, 2501
HphI	GGTGA	9 cut(s)	881, 1124, 1916, 2102, 2352, 2387, 2744, 3073, 3083
Hpy166II	GTNNAC	7 cut(s)	220, 1232, 1405, 1474, 1720, 1765, 2456
Hpy8I	GTNNAC	7 cut(s)	220, 1232, 1405, 1474, 1720, 1765, 2456
Hpy99I	CGWCG	1 cut(s)	232
HpyCH4III	ACNGT	6 cut(s)	539, 1377, 1468, 1797, 2625, 2655
HpyCH4IV	ACGT	5 cut(s)	230, 1293, 1807, 2184, 2326
HpySE526I	ACGT	5 cut(s)	230, 1293, 1807, 2184, 2326
Hsp92I	GRCGYC	1 cut(s)	697
HspAI	GCGC	3 cut(s)	697, 1008, 2933
KasI	GGCGCC	1 cut(s)	696
KroI	GCCGGC	1 cut(s)	18
KroNI	GCCGGC	1 cut(s)	20
Ksp22I	TGATCA	2 cut(s)	1539, 2128
LmnI	GCTCC	6 cut(s)	10, 42, 968, 1070, 1106, 2588
LweI	GCATC	5 cut(s)	492, 757, 1105, 1516, 1689
MabI	ACCWGGT	2 cut(s)	838, 2002
MaeI	CTAG	2 cut(s)	575, 2438
MaeII	ACGT	5 cut(s)	230, 1293, 1807, 2184, 2326
MflI	RGATCY	3 cut(s)	1835, 2503, 2781
MhlI	GDGCHC	3 cut(s)	811, 917, 1667
MlsI	TGGCCA	1 cut(s)	1874
MluNI	TGGCCA	1 cut(s)	1874
Mly113I	GGCGCC	1 cut(s)	697
MlyI	GAGTC	8 cut(s)	218, 1322, 1928, 2407, 2438, 2693, 2737, 3087
MmeI	TCCRAC	1 cut(s)	668
Mox20I	TGGCCA	1 cut(s)	1874
MroNI	GCCGGC	1 cut(s)	18
MroXI	GAANNNNTTC	1 cut(s)	2877
MscI	TGGCCA	1 cut(s)	1874
MslI	CAYNNNNRTG	4 cut(s)	860, 1269, 1469, 2400
Msp20I	TGGCCA	1 cut(s)	1874
MspA1I	CMGCKG	1 cut(s)	1342
MspCI	CTTAAG	1 cut(s)	1052
MspI	CCGG	6 cut(s)	19, 1619, 1842, 2048, 2339, 2501
MspR9I	CCNGG	9 cut(s)	840, 1104, 1371, 1995, 2004, 2048, 2049, 2340, 3057
Mva1269I	GAATGC	4 cut(s)	680, 2179, 2371, 3041
MvaI	CCWGG	6 cut(s)	840, 1104, 1371, 1995, 2004, 3057
NaeI	GCCGGC	1 cut(s)	20
NarI	GGCGCC	1 cut(s)	697
NciI	CCSGG	3 cut(s)	2048, 2049, 2340
NdeI	CATATG	1 cut(s)	924
NgoMIV	GCCGGC	1 cut(s)	18
NmeAIII	GCCGAG	1 cut(s)	2765
NmuCI	GTSAC	7 cut(s)	369, 562, 616, 625, 742, 1286, 3079
NsbI	TGCGCA	1 cut(s)	2934
NspI	RCATGY	2 cut(s)	1753, 2215
NspV	TTCGAA	1 cut(s)	3045
OliI	CACNNNNGTG	1 cut(s)	1469
PaeR7I	CTCGAG	1 cut(s)	1910
PaqCI	CACCTGC	1 cut(s)	3214
PciI	ACATGT	2 cut(s)	1749, 2211
PctI	GAATGC	4 cut(s)	680, 2179, 2371, 3041
PdiI	GCCGGC	1 cut(s)	20
PdmI	GAANNNNTTC	1 cut(s)	2877
PfeI	GAWTC	7 cut(s)	1274, 1819, 2255, 2270, 2491, 2576, 2765
PflFI	GACNNNGTC	1 cut(s)	591
PfoI	TCCNGGA	2 cut(s)	1993, 2338
PleI	GAGTC	8 cut(s)	218, 1322, 1927, 2407, 2437, 2692, 2737, 3086
PluTI	GGCGCC	1 cut(s)	700
PpsI	GAGTC	8 cut(s)	218, 1322, 1927, 2407, 2437, 2692, 2737, 3086
PpuMI	RGGWCCY	1 cut(s)	2995
PscI	ACATGT	2 cut(s)	1749, 2211
PshBI	ATTAAT	2 cut(s)	1410, 2910
PsiI	TTATAA	1 cut(s)	1629
Psp124BI	GAGCTC	2 cut(s)	811, 917
Psp1406I	AACGTT	2 cut(s)	1293, 2326
Psp5II	RGGWCCY	1 cut(s)	2995
Psp6I	CCWGG	6 cut(s)	838, 1102, 1369, 1993, 2002, 3055
PspFI	CCCAGC	1 cut(s)	2852
PspGI	CCWGG	6 cut(s)	838, 1102, 1369, 1993, 2002, 3055
PspPI	GGNCC	7 cut(s)	95, 986, 1100, 1616, 2229, 2995, 3145
PspPPI	RGGWCCY	1 cut(s)	2995
PsrI	GAACNNNNNNTAC	2 cut(s)	2232, 2264
PstNI	CAGNNNCTG	1 cut(s)	2768
PsuI	RGATCY	3 cut(s)	1835, 2503, 2781
PsyI	GACNNNGTC	1 cut(s)	591
RsaI	GTAC	5 cut(s)	1721, 1766, 1926, 2241, 2753
RsaNI	GTAC	5 cut(s)	1720, 1765, 1925, 2240, 2752
RseI	CAYNNNNRTG	4 cut(s)	860, 1269, 1469, 2400
SacI	GAGCTC	2 cut(s)	811, 917
Sau96I	GGNCC	7 cut(s)	95, 986, 1100, 1616, 2229, 2995, 3145
SchI	GAGTC	8 cut(s)	218, 1322, 1928, 2407, 2438, 2693, 2737, 3087
ScrFI	CCNGG	9 cut(s)	840, 1104, 1371, 1995, 2004, 2048, 2049, 2340, 3057
SduI	GDGCHC	3 cut(s)	811, 917, 1667
SexAI	ACCWGGT	2 cut(s)	838, 2002
SfaNI	GCATC	5 cut(s)	492, 757, 1105, 1516, 1689
SfoI	GGCGCC	1 cut(s)	698
Sfr274I	CTCGAG	1 cut(s)	1910
SfuI	TTCGAA	1 cut(s)	3045
SinI	GGWCC	4 cut(s)	95, 986, 1616, 2995
SlaI	CTCGAG	1 cut(s)	1910
SmaI	CCCGGG	1 cut(s)	2049
SmiMI	CAYNNNNRTG	4 cut(s)	860, 1269, 1469, 2400
SmlI	CTYRAG	6 cut(s)	356, 527, 1052, 1642, 1910, 2522
SmoI	CTYRAG	6 cut(s)	356, 527, 1052, 1642, 1910, 2522
SpeI	ACTAGT	1 cut(s)	2437
SsiI	CCGC	8 cut(s)	36, 146, 149, 152, 1342, 1517, 1585, 2300
SspDI	GGCGCC	1 cut(s)	696
SspI	AATATT	1 cut(s)	2111
SspMI	CTAG	2 cut(s)	575, 2438
SstI	GAGCTC	2 cut(s)	811, 917
StyD4I	CCNGG	9 cut(s)	838, 1102, 1369, 1993, 2002, 2046, 2047, 2338, 3055
StyI	CCWWGG	1 cut(s)	3138
TaaI	ACNGT	6 cut(s)	539, 1377, 1468, 1797, 2625, 2655
TaiI	ACGT	5 cut(s)	233, 1296, 1810, 2187, 2329
TaqI	TCGA	7 cut(s)	227, 326, 1390, 1911, 2205, 2871, 3045
TatI	WGTACW	2 cut(s)	1719, 2751
TauI	GCSGC	2 cut(s)	149, 152
TfiI	GAWTC	7 cut(s)	1274, 1819, 2255, 2270, 2491, 2576, 2765
TscAI	CASTG	9 cut(s)	747, 1149, 1291, 1471, 1767, 1945, 2138, 2478, 2560
TseFI	GTSAC	7 cut(s)	369, 562, 616, 625, 742, 1286, 3079
Tsp45I	GTSAC	7 cut(s)	369, 562, 616, 625, 742, 1286, 3079
TspGWI	ACGGA	4 cut(s)	644, 1310, 2268, 3041
TspMI	CCCGGG	1 cut(s)	2047
TspRI	CASTG	9 cut(s)	747, 1149, 1291, 1471, 1767, 1945, 2138, 2478, 2560
Tth111I	GACNNNGTC	1 cut(s)	591
Vha464I	CTTAAG	1 cut(s)	1052
VpaK11BI	GGWCC	4 cut(s)	95, 986, 1616, 2995
VspI	ATTAAT	2 cut(s)	1410, 2910
XagI	CCTNNNNNAGG	2 cut(s)	1772, 2402
XapI	RAATTY	7 cut(s)	117, 1154, 1550, 2356, 2423, 2536, 2893
XceI	RCATGY	2 cut(s)	1753, 2215
XhoI	CTCGAG	1 cut(s)	1910
XmaI	CCCGGG	1 cut(s)	2047
XmiI	GTMKAC	1 cut(s)	219
XmnI	GAANNNNTTC	1 cut(s)	2877
XspI	CTAG	2 cut(s)	575, 2438

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.