Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0003227

Physical Location & Seq

Genomic Coordinates Forward (+)

9769717 .. 9778628

Gene Structure 8912 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1112400.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1509 bp

ATGTGGGCGTCTCAGAGAATCATCAATGCTCCCGCTATAACTCCTCCCCTCTCGTCTTCGTCTTCCTCAACCTTCGTTTCCGGAGCCTTCCTCTTCCTCCGGTCCTCCTTTCCTTCATCCTCCCATCCTCGCTTTCTCTCTCCCTCGCTTTCTCTCTCCTCTTCCATCTCTCTCTCCCATTCCGCCATGCCTTACAACCAGCGAAGGGGTGGGCGTGGAGAACAAAAGTGGACACAAAAGCAAAAGACTGATGGCTCATCAGCGTCGACAGGGGATTCTTCAGCCGCTGTCACTAACAGAGTTGGTGAGTTGAGTCTTAGTGGAGGCAATGGGCAGACCAATGCTTCGGTTAAACCCTTACAGTTTGGGAAGGTCCAATCGGCAAATCAGGGTCCAGTACAAGGTCAGAAAGGAACTTGGATGCCTAAGTCATATGGGACAGTGGATGGAGCTAAAGCAGCAGAAGTTGAAGCACCTGTTGATAAATGTTCAGTTGGAACCCAGGGAAATGGAGCTGGGCAAGCAGCAGTTAAAAAAACCAGTGTTGGTTTAAGTCAGTTGTTCAATGGTAATCTGTTGGAAAAATTTACTGTGGACAACTCCACGTATGCTCAAGTGCAAATACGAGCTACTTTCTATCCCAAATTTGAAAATGAGAAGACAGATGGGGAGATTAGGACAAGGATGATAGAGATTGTATCTAACGGCTTGGCTACCTTGGAGGTTTCACTTAAACACTCGGGATCTCTTTTTATGTACGCTGGTAACAAGGGTGGAGCATATGCCAAAAACAGCTTTGGGAATATATATACGGCTGTAGGCGTATTTGTTCTTGGACGGATGTTTCGGGAGGCATGGGGACGTGAAGCACCAAAAGTTCAAGCAGAGTTTAATGATTTTCTTGAGAGGAATCGTATGTGCATATCAATGGAACTCGTAACTGCTGTTCTAGGAGACCATGGACAACGCCCGAAAGAAGATTTTGCTGTAGTGACGGCAGTCACAGATTTGGGCAATGGAAAGCCAAAGTTCTACTCAACCCCTGAGATAATTGCATTCTGTAGAAAATGGCGCCTACCAACAAATCATGTATGGCTGTTCTCAACAAGGAAATCAGTGACCTCATTTTTTGCTGCCTTTGATGCTCTCTGCGAAGAAGGAACTGCAACAACTGTATGCATGGCTCTTGATGAAGTTGCAGATATATCTATACCAGGTTCAAAAGATCATGTAAAGGAGCAGGGTGAAATCTTAGAGGGCATTGTTGCTCGTATTGTAAGCCAGGAGAGCTCAAAACATATGGAAAAAGTCTTGATAGATTTCCCTCCTCCACCAATGGATGGAGGTATGATGTTTCCCTCTTTCATCTATCTGTTTTGGGGCATTATAGTTCACTTCAAGCTGGAGTTTTTTTGTGGGTGTGTTGTTGTTCTCCCGATTCAGCTGCAACCTTCACTCTTAAAACTTATTAAACCATTTTCTCTCCTTCCCTTTTTGGTTCCTAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000278 GO:0000281 GO:0000394 GO:0000910 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0003972 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006388 GO:0006396 GO:0006399 GO:0006725 GO:0006807 GO:0007049 GO:0007275 GO:0008033 GO:0008150 GO:0008152 GO:0008356 GO:0008380 GO:0008452 GO:0009790 GO:0009791 GO:0009793 GO:0009966 GO:0009987 GO:0010069 GO:0010070 GO:0010154 GO:0010467 GO:0010646 GO:0010928 GO:0016070 GO:0016874 GO:0016886 GO:0022402 GO:0022414 GO:0023051 GO:0032501 GO:0032502 GO:0034470 GO:0034641 GO:0034660 GO:0042245 GO:0043170 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0048316 GO:0048583 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051301 GO:0061458 GO:0061640 GO:0065007 GO:0071704 GO:0090304 GO:0097159 GO:0140098 GO:1901360 GO:1901363 GO:1903047

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

tRNA_lig_CPD

Protein Analysis

503

Amino Acids

54.55

Weight (kDa)

9.07

Isoelectric Point (pI)

31.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003227)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G07910 AT1G07910
fragaria_vesca	FvH4_3g33360 FvH4_3g33360 FvH4_3g33360 FvH4_3g33360 FvH4_3g33360 FvH4_3g33360 FvH4_3g33360 FvH4_3g33360 FvH4_4g02320
malus_domestica	MD03G1112400.v1.1 MD11G1129800.v1.1
prunus_persica	Prupe.6G094700_v2.0.a1
pyrus_communis	pycom11g10750 pycom11g10760
rosa_chinensis	RchiOBHm_Chr4g0389641 RchiOBHm_Chr5g0060751
rosa_laevigata	RLG00000009964 RLG00000035390
rosa_multiflora	Rmu_co8520825.1_g000001 Rmu_sc0006568.1_g000004 Rmu_sc0007419.1_g000006
rosa_roxburghii	Rroxscaffold_1G00019960 Rroxscaffold_5G00335630
rosa_rugosa	Rorug03G0324600 Rorug05G0333400
rosa_samantha	Rh4AG029200 Rh4BG022400 Rh4CG031200 Rh4DG022900 Rh5AG396400 Rh5BG408600 Rh5CG433200 Rh5DG423800
rosa_wichuraiana	Rw4G002180 Rw5G037370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1071
AccB7I	CCANNNNNTGG	1 cut(s)	1340
AccI	GTMKAC	1 cut(s)	266
AccIII	TCCGGA	1 cut(s)	80
AciI	CCGC	3 cut(s)	33, 183, 285
AclWI	GGATC	1 cut(s)	751
AcsI	RAATTY	2 cut(s)	584, 644
AcuI	CTGAAG	1 cut(s)	264
AcyI	GRCGYC	2 cut(s)	8, 1072
AfaI	GTAC	2 cut(s)	399, 758
AfiI	CCNNNNNNNGG	3 cut(s)	205, 401, 1340
AgsI	TTSAA	6 cut(s)	470, 565, 650, 881, 1221, 1399
AjiI	CACGTC	1 cut(s)	863
AjnI	CCWGG	3 cut(s)	501, 1213, 1281
AluBI	AGCT	7 cut(s)	452, 515, 629, 795, 1290, 1402, 1444
AluI	AGCT	7 cut(s)	452, 515, 629, 795, 1290, 1402, 1444
Alw21I	GWGCWC	1 cut(s)	1292
Alw26I	GTCTC	2 cut(s)	15, 948
AlwI	GGATC	1 cut(s)	751
AlwNI	CAGNNNCTG	1 cut(s)	287
Ama87I	CYCGRG	1 cut(s)	739
Aor13HI	TCCGGA	1 cut(s)	80
ApeKI	GCWGC	4 cut(s)	458, 524, 1133, 1444
ApoI	RAATTY	2 cut(s)	584, 644
ArsI	GACNNNNNNTTYG	4 cut(s)	328, 360, 828, 860
AspLEI	GCGC	1 cut(s)	1074
AspS9I	GGNCC	3 cut(s)	102, 373, 392
AsuHPI	GGTGA	2 cut(s)	317, 1256
AvaI	CYCGRG	1 cut(s)	739
AvaII	GGWCC	3 cut(s)	102, 373, 392
BanI	GGYRCC	1 cut(s)	1071
BanII	GRGCYC	1 cut(s)	1292
BbsI	GAAGAC	3 cut(s)	48, 54, 665
Bbv12I	GWGCWC	1 cut(s)	1292
BbvI	GCAGC	4 cut(s)	470, 536, 1120, 1431
BccI	CCATC	6 cut(s)	132, 173, 245, 440, 659, 1334
BceAI	ACGGC	3 cut(s)	721, 828, 1011
BcgI	CGANNNNNNTGC	2 cut(s)	1426, 1460
BciT130I	CCWGG	3 cut(s)	503, 1215, 1283
BcoDI	GTCTC	2 cut(s)	15, 948
BfaI	CTAG	1 cut(s)	950
BfmI	CTRYAG	3 cut(s)	816, 987, 1060
BfoI	RGCGCY	1 cut(s)	1075
BisI	GCNGC	5 cut(s)	285, 459, 525, 1134, 1445
BlsI	GCNGC	5 cut(s)	286, 460, 526, 1135, 1446
Bme1390I	CCNGG	3 cut(s)	503, 1215, 1283
Bme18I	GGWCC	3 cut(s)	102, 373, 392
BmeT110I	CYCGRG	1 cut(s)	739
BmgBI	CACGTC	1 cut(s)	863
BmgT120I	GGNCC	3 cut(s)	102, 373, 392
BmiI	GGNNCC	5 cut(s)	85, 393, 499, 1073, 1500
BmrFI	CCNGG	3 cut(s)	503, 1215, 1283
BmsI	GCATC	2 cut(s)	411, 1132
BoxI	GACNNNNGTC	1 cut(s)	998
BpiI	GAAGAC	3 cut(s)	48, 54, 665
BplI	GAGNNNNNCTC	2 cut(s)	75, 107
BpmI	CTGGAG	1 cut(s)	1424
BpuEI	CTTGAG	2 cut(s)	597, 923
BsaAI	YACGTR	1 cut(s)	606
BsaHI	GRCGYC	2 cut(s)	8, 1072
BsaI	GGTCTC	1 cut(s)	948
BsaJI	CCNNGG	4 cut(s)	501, 502, 717, 958
BsaWI	WCCGGW	2 cut(s)	80, 99
Bsc4I	CCNNNNNNNGG	3 cut(s)	205, 401, 1340
Bse1I	ACTGG	2 cut(s)	395, 540
Bse3DI	GCAATG	2 cut(s)	334, 1021
BseAI	TCCGGA	1 cut(s)	80
BseBI	CCWGG	3 cut(s)	503, 1215, 1283
BseDI	CCNNGG	4 cut(s)	501, 502, 717, 958
BseGI	GGATG	7 cut(s)	116, 124, 426, 451, 690, 846, 1345
BseLI	CCNNNNNNNGG	3 cut(s)	205, 401, 1340
BseMI	GCAATG	2 cut(s)	334, 1021
BseMII	CTCAG	2 cut(s)	26, 1035
BseNI	ACTGG	2 cut(s)	395, 540
BseRI	GAGGAG	3 cut(s)	33, 148, 1317
BseXI	GCAGC	4 cut(s)	470, 536, 1120, 1431
BseYI	CCCAGC	1 cut(s)	515
BshNI	GGYRCC	1 cut(s)	1071
BsiHKAI	GWGCWC	1 cut(s)	1292
BsiHKCI	CYCGRG	1 cut(s)	739
BsiSI	CCGG	2 cut(s)	81, 100
BslFI	GGGAC	2 cut(s)	451, 873
BslI	CCNNNNNNNGG	3 cut(s)	205, 401, 1340
BsmAI	GTCTC	2 cut(s)	15, 948
BsmBI	CGTCTC	1 cut(s)	15
BsmFI	GGGAC	2 cut(s)	451, 873
BsmI	GAATGC	1 cut(s)	1055
Bso31I	GGTCTC	1 cut(s)	948
BsoBI	CYCGRG	1 cut(s)	739
Bsp1286I	GDGCHC	1 cut(s)	1292
Bsp13I	TCCGGA	1 cut(s)	80
Bsp143I	GATC	2 cut(s)	743, 1225
Bsp19I	CCATGG	1 cut(s)	958
BspACI	CCGC	3 cut(s)	33, 183, 285
BspCNI	CTCAG	2 cut(s)	25, 1036
BspEI	TCCGGA	1 cut(s)	80
BspLI	GGNNCC	5 cut(s)	85, 393, 499, 1073, 1500
BspPI	GGATC	1 cut(s)	751
BspT107I	GGYRCC	1 cut(s)	1071
BspTNI	GGTCTC	1 cut(s)	948
BsrDI	GCAATG	2 cut(s)	334, 1021
BsrI	ACTGG	2 cut(s)	395, 540
BssECI	CCNNGG	4 cut(s)	501, 502, 717, 958
BssMI	GATC	2 cut(s)	743, 1225
BssNI	GRCGYC	2 cut(s)	8, 1072
BssT1I	CCWWGG	2 cut(s)	717, 958
Bst2UI	CCWGG	3 cut(s)	503, 1215, 1283
Bst4CI	ACNGT	4 cut(s)	363, 442, 592, 1174
Bst6I	CTCTTC	2 cut(s)	98, 166
BstACI	GRCGYC	2 cut(s)	8, 1072
BstBAI	YACGTR	1 cut(s)	606
BstC8I	GCNNGC	1 cut(s)	522
BstDEI	CTNAG	5 cut(s)	12, 317, 426, 1044, 1252
BstDSI	CCRYGG	1 cut(s)	958
BstF5I	GGATG	7 cut(s)	116, 124, 426, 451, 690, 846, 1345
BstH2I	RGCGCY	1 cut(s)	1075
BstHHI	GCGC	1 cut(s)	1074
BstKTI	GATC	2 cut(s)	746, 1228
BstMAI	GTCTC	2 cut(s)	15, 948
BstMBI	GATC	2 cut(s)	743, 1225
BstMWI	GCNNNNNNNGC	4 cut(s)	458, 521, 1142, 1287
BstNI	CCWGG	3 cut(s)	503, 1215, 1283
BstPAI	GACNNNNGTC	1 cut(s)	998
BstSCI	CCNGG	3 cut(s)	501, 1213, 1281
BstSFI	CTRYAG	3 cut(s)	816, 987, 1060
BstV1I	GCAGC	4 cut(s)	470, 536, 1120, 1431
BstV2I	GAAGAC	3 cut(s)	48, 54, 665
BstX2I	RGATCY	1 cut(s)	743
BstXI	CCANNNNNNTGG	1 cut(s)	509
BstYI	RGATCY	1 cut(s)	743
BtgI	CCRYGG	1 cut(s)	958
BtrI	CACGTC	1 cut(s)	863
BtsCI	GGATG	7 cut(s)	116, 124, 426, 451, 690, 846, 1345
BtsIMutI	CAGTG	3 cut(s)	447, 547, 1122
Cac8I	GCNNGC	1 cut(s)	522
CaiI	CAGNNNCTG	1 cut(s)	287
CfoI	GCGC	1 cut(s)	1074
Cfr13I	GGNCC	3 cut(s)	102, 373, 392
CseI	GACGC	1 cut(s)	252
CsiI	ACCWGGT	1 cut(s)	1213
Csp6I	GTAC	2 cut(s)	398, 757
CviAII	CATG	6 cut(s)	187, 855, 959, 1088, 1180, 1229
CviQI	GTAC	2 cut(s)	398, 757
DdeI	CTNAG	5 cut(s)	12, 317, 426, 1044, 1252
DinI	GGCGCC	1 cut(s)	1073
DpnI	GATC	2 cut(s)	745, 1227
DpnII	GATC	2 cut(s)	743, 1225
Eam1104I	CTCTTC	2 cut(s)	98, 166
EarI	CTCTTC	2 cut(s)	98, 166
EciI	GGCGGA	1 cut(s)	172
Ecl136II	GAGCTC	1 cut(s)	1290
Eco130I	CCWWGG	2 cut(s)	717, 958
Eco24I	GRGCYC	1 cut(s)	1292
Eco31I	GGTCTC	1 cut(s)	948
Eco47I	GGWCC	3 cut(s)	102, 373, 392
Eco53kI	GAGCTC	1 cut(s)	1290
Eco57I	CTGAAG	1 cut(s)	264
Eco88I	CYCGRG	1 cut(s)	739
EcoICRI	GAGCTC	1 cut(s)	1290
EcoRII	CCWGG	3 cut(s)	501, 1213, 1281
EcoT14I	CCWWGG	2 cut(s)	717, 958
EcoT22I	ATGCAT	1 cut(s)	1181
EcoT38I	GRGCYC	1 cut(s)	1292
EgeI	GGCGCC	1 cut(s)	1073
EheI	GGCGCC	1 cut(s)	1073
ErhI	CCWWGG	2 cut(s)	717, 958
Esp3I	CGTCTC	1 cut(s)	15
FaeI	CATG	6 cut(s)	190, 858, 962, 1091, 1183, 1232
FaqI	GGGAC	2 cut(s)	451, 873
FatI	CATG	6 cut(s)	186, 854, 958, 1087, 1179, 1228
FauI	CCCGC	1 cut(s)	40
FauNDI	CATATG	3 cut(s)	433, 781, 1299
FblI	GTMKAC	1 cut(s)	266
Fnu4HI	GCNGC	5 cut(s)	285, 459, 525, 1134, 1445
FokI	GGATG	7 cut(s)	103, 111, 433, 458, 697, 853, 1352
FriOI	GRGCYC	1 cut(s)	1292
Fsp4HI	GCNGC	5 cut(s)	285, 459, 525, 1134, 1445
FspBI	CTAG	1 cut(s)	950
GlaI	GCGC	1 cut(s)	1073
GluI	GCNGC	5 cut(s)	285, 459, 525, 1134, 1445
GsaI	CCCAGC	1 cut(s)	519
GsuI	CTGGAG	1 cut(s)	1424
HaeII	RGCGCY	1 cut(s)	1075
HapII	CCGG	2 cut(s)	81, 100
HgaI	GACGC	1 cut(s)	252
HhaI	GCGC	1 cut(s)	1074
Hin1I	GRCGYC	2 cut(s)	8, 1072
Hin1II	CATG	6 cut(s)	190, 858, 962, 1091, 1183, 1232
Hin6I	GCGC	1 cut(s)	1072
HinP1I	GCGC	1 cut(s)	1072
HincII	GTYRAC	1 cut(s)	267
HindII	GTYRAC	1 cut(s)	267
HinfI	GANTC	5 cut(s)	18, 275, 313, 910, 1438
HpaII	CCGG	2 cut(s)	81, 100
HphI	GGTGA	2 cut(s)	317, 1256
Hpy166II	GTNNAC	4 cut(s)	231, 267, 595, 1393
Hpy188I	TCNGA	2 cut(s)	15, 408
Hpy188III	TCNNGA	7 cut(s)	81, 741, 848, 902, 1187, 1312, 1435
Hpy8I	GTNNAC	4 cut(s)	231, 267, 595, 1393
Hpy99I	CGWCG	1 cut(s)	268
HpyAV	CCTTC	8 cut(s)	82, 97, 123, 198, 364, 1151, 1461, 1496
HpyCH4III	ACNGT	4 cut(s)	363, 442, 592, 1174
HpyCH4IV	ACGT	2 cut(s)	605, 862
HpyCH4V	TGCA	7 cut(s)	619, 921, 1055, 1166, 1179, 1199, 1447
HpyF10VI	GCNNNNNNNGC	4 cut(s)	458, 521, 1142, 1287
HpyF3I	CTNAG	5 cut(s)	12, 317, 426, 1044, 1252
HpySE526I	ACGT	2 cut(s)	605, 862
Hsp92I	GRCGYC	2 cut(s)	8, 1072
Hsp92II	CATG	6 cut(s)	190, 858, 962, 1091, 1183, 1232
HspAI	GCGC	1 cut(s)	1072
KasI	GGCGCC	1 cut(s)	1071
Kpn2I	TCCGGA	1 cut(s)	80
Kzo9I	GATC	2 cut(s)	743, 1225
LmnI	GCTCC	6 cut(s)	34, 83, 449, 512, 776, 1237
Lsp1109I	GCAGC	4 cut(s)	470, 536, 1120, 1431
LweI	GCATC	2 cut(s)	411, 1132
MabI	ACCWGGT	1 cut(s)	1213
MaeI	CTAG	1 cut(s)	950
MaeII	ACGT	2 cut(s)	605, 862
MaeIII	GTNAC	6 cut(s)	289, 764, 937, 991, 1000, 1117
MalI	GATC	2 cut(s)	745, 1227
MboI	GATC	2 cut(s)	743, 1225
MboII	GAAGA	8 cut(s)	48, 54, 85, 153, 270, 670, 989, 1166
MflI	RGATCY	1 cut(s)	743
MhlI	GDGCHC	1 cut(s)	1292
MluCI	AATT	3 cut(s)	584, 644, 1050
Mly113I	GGCGCC	1 cut(s)	1072
MlyI	GAGTC	1 cut(s)	322
MmeI	TCCRAC	2 cut(s)	475, 558
Mph1103I	ATGCAT	1 cut(s)	1181
MroI	TCCGGA	1 cut(s)	80
MseI	TTAA	7 cut(s)	351, 531, 551, 732, 891, 1460, 1470
MslI	CAYNNNNRTG	1 cut(s)	926
MspA1I	CMGCKG	2 cut(s)	287, 1444
MspI	CCGG	2 cut(s)	81, 100
MspR9I	CCNGG	3 cut(s)	503, 1215, 1283
Mva1269I	GAATGC	1 cut(s)	1055
MvaI	CCWGG	3 cut(s)	503, 1215, 1283
MwoI	GCNNNNNNNGC	4 cut(s)	458, 521, 1142, 1287
NarI	GGCGCC	1 cut(s)	1072
NcoI	CCATGG	1 cut(s)	958
NdeI	CATATG	3 cut(s)	433, 781, 1299
NdeII	GATC	2 cut(s)	743, 1225
NlaIII	CATG	6 cut(s)	190, 858, 962, 1091, 1183, 1232
NlaIV	GGNNCC	5 cut(s)	85, 393, 499, 1073, 1500
NmuCI	GTSAC	4 cut(s)	289, 991, 1000, 1117
NsiI	ATGCAT	1 cut(s)	1181
PasI	CCCWGGG	1 cut(s)	502
PctI	GAATGC	1 cut(s)	1055
PfeI	GAWTC	4 cut(s)	18, 275, 910, 1438
PflMI	CCANNNNNTGG	1 cut(s)	1340
PkrI	GCNGC	5 cut(s)	286, 460, 526, 1135, 1446
PleI	GAGTC	1 cut(s)	321
PluTI	GGCGCC	1 cut(s)	1075
PpsI	GAGTC	1 cut(s)	321
Ppu21I	YACGTR	1 cut(s)	606
PshAI	GACNNNNGTC	1 cut(s)	998
Psp124BI	GAGCTC	1 cut(s)	1292
Psp6I	CCWGG	3 cut(s)	501, 1213, 1281
PspFI	CCCAGC	1 cut(s)	515
PspGI	CCWGG	3 cut(s)	501, 1213, 1281
PspN4I	GGNNCC	5 cut(s)	85, 393, 499, 1073, 1500
PspPI	GGNCC	3 cut(s)	102, 373, 392
PsrI	GAACNNNNNNTAC	2 cut(s)	930, 962
PstNI	CAGNNNCTG	1 cut(s)	287
PsuI	RGATCY	1 cut(s)	743
PvuII	CAGCTG	1 cut(s)	1444
RsaI	GTAC	2 cut(s)	399, 758
RsaNI	GTAC	2 cut(s)	398, 757
RseI	CAYNNNNRTG	1 cut(s)	926
SacI	GAGCTC	1 cut(s)	1292
SalI	GTCGAC	1 cut(s)	265
SaqAI	TTAA	7 cut(s)	351, 531, 551, 732, 891, 1460, 1470
SatI	GCNGC	5 cut(s)	285, 459, 525, 1134, 1445
Sau3AI	GATC	2 cut(s)	743, 1225
Sau96I	GGNCC	3 cut(s)	102, 373, 392
SchI	GAGTC	1 cut(s)	322
ScrFI	CCNGG	3 cut(s)	503, 1215, 1283
SduI	GDGCHC	1 cut(s)	1292
SexAI	ACCWGGT	1 cut(s)	1213
SfaNI	GCATC	2 cut(s)	411, 1132
SfcI	CTRYAG	3 cut(s)	816, 987, 1060
SfoI	GGCGCC	1 cut(s)	1073
SinI	GGWCC	3 cut(s)	102, 373, 392
SmiMI	CAYNNNNRTG	1 cut(s)	926
SmlI	CTYRAG	2 cut(s)	612, 902
SmoI	CTYRAG	2 cut(s)	612, 902
Sse9I	AATT	3 cut(s)	584, 644, 1050
SsiI	CCGC	3 cut(s)	33, 183, 285
SspDI	GGCGCC	1 cut(s)	1071
SspMI	CTAG	1 cut(s)	950
SstI	GAGCTC	1 cut(s)	1292
StyD4I	CCNGG	3 cut(s)	501, 1213, 1281
StyI	CCWWGG	2 cut(s)	717, 958
TaaI	ACNGT	4 cut(s)	363, 442, 592, 1174
TaiI	ACGT	2 cut(s)	608, 865
TaqI	TCGA	1 cut(s)	266
TasI	AATT	3 cut(s)	584, 644, 1050
TatI	WGTACW	1 cut(s)	397
TauI	GCSGC	1 cut(s)	287
TfiI	GAWTC	4 cut(s)	18, 275, 910, 1438
Tru1I	TTAA	7 cut(s)	351, 531, 551, 732, 891, 1460, 1470
Tru9I	TTAA	7 cut(s)	351, 531, 551, 732, 891, 1460, 1470
TscAI	CASTG	3 cut(s)	447, 547, 1122
TseFI	GTSAC	4 cut(s)	289, 991, 1000, 1117
TseI	GCWGC	4 cut(s)	458, 524, 1133, 1444
Tsp45I	GTSAC	4 cut(s)	289, 991, 1000, 1117
TspDTI	ATGAA	3 cut(s)	105, 1206, 1354
TspGWI	ACGGA	1 cut(s)	853
TspRI	CASTG	3 cut(s)	447, 547, 1122
Van91I	CCANNNNNTGG	1 cut(s)	1340
VpaK11BI	GGWCC	3 cut(s)	102, 373, 392
XapI	RAATTY	2 cut(s)	584, 644
XcmI	CCANNNNNNNNNTGG	1 cut(s)	206
XmiI	GTMKAC	1 cut(s)	266
XspI	CTAG	1 cut(s)	950
Zsp2I	ATGCAT	1 cut(s)	1181

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.