FvH4_4g16730

DNA topoisomerase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Forward (+)
20587762 .. 20595504
7743 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g16730.t2

Sequence Viewer

Length: 2517 bp
ATGGCTTATCAGAATTCTACTAACGAATATACATCTGATGACGAAGAACCATTAGTTTTCAAACGGTCTGCAGCATCTAAACAAAATCAGTCAAACACAGACACAAAGAAATTATCGTCTCAGAGGTGTGATGGACAACCACGAAGAGTCTCTGAGGTACATTCTTCCAATGGTGTAAACTCAAGTGTTCATAAGGATAAGACCACTCCATCTACAAAGGCGTCACCAGGGAAATCTCCCGCAGCAATCCGAAAAGAAGTATCAGAACAGAACAAGTCTGTCTCTGTTAAAGAGGAAAATACTCCTATTGAACATCCTGCTGCAGAAAATAGTGATTCTGATGATGAAAAGCCGATAAATTCCAGATTGAAGGCTAAAATAAACAATGTCAAAAAGGAAGATACAGATGATGAAGATAATAAACCTTTAGCAGCAAGGGTTAATAAGTCTAATGTGGGAACATCAGGCTGTAAGCCTAGTGACGCTAAAGAAAGGAAGCCATTGGTTCAGAAGAATGGTTCGAGCACAATAGATAAAGGGAAAAGCTCGTCTTTGGTGTCAGGTAAGAGGCCTCTAGATAAGGGGAATTGTTCTGAGCAATCTTCAATTAAAAAGCCAAAAGTTGGAGAGTCTTCAACATCAGTAAAGAGCAAGCAGGTGTCTGACAAAACAGAGCCGAAGGCAGATGATGATGAAATGACACTTTCCCAGAGAATGAAAAAAACAACATCTGCTAATAAATCATCTCTGACGAAGAAAACTATATCTAAAGTCAGTTCATCTTCAATCCAGAAAAAGATCCAGAAAGGCAAAAAGCCAGATAAGTTTTCAAAGTATTCTAAGTCAACAAGAGAAGGACCTGGCTCTAATGACGGGCAGAAAAAATGGACTACTTTAGAGCACAATGGTGTCATTTTCCCACCTTCTTACAAGCCTCACGGGGTAAAGATGCTTTACAATGGCAAGCCAGTCAACTTGACACCTGAACAAGAGGAGGTCGCAACAATGTATGCAGTGATGATAGATACAGAATATGTGCAGAAACAAACTTTCAGAGACAACTTTTGGAATGATTGGCGTAAATTGCTTGGAAAGAACCATGTAATTCAGAAATTGGATGCTTGTGATTTCAAACCAATATATGACTGGTATCAGAAAGAAAAGGAGAAGAAGAAACAAATGAGTTCAGAAGAGAAGAAGGCTGTCAAGGAAGAGAAATTGAAACAAGAGGAGAAGTATATGTGGGCAGTCGTTGATGGTGTAAAAGAGAAGGTTGGAAACTTCAGAGTTGAACCACCTGGATTATTCCGAGGCCGTGGCGAGCATCCCAAGTCAGGAAAGCTGAAGAGGAGGATTAGTCCACGCGAAGTTACAATAAATATAGGAAAAAATGCCGAGATCCCCGAATGCCCCATTCCGGGTGAAAGGTGGAAAGAAGTAAGGCATGACAATACTGTTACATGGTTGGCTTTCTGGAATGATCCAATCAATCCAAAGGAGTTCAAATACGTATTTCTTGCAGCCAGTAGTTCCTTAAAGGGGCAAAGCGACAAGGAGAAATATGAGAAAGCAAGGATGTTGAAGGAATACATAGGAGATATCAGGGCTGCATACACTAAGGATTTTACAAGTAGAGATGCTGCAAAGCGGCAAATAGCTGTTGCTACCTATCTCATCGACAAACTTGCTCTTAGGGCTGGAAATGAGAAGGATGATGATGAAGCCGATACTGTCGGTTGCTGCACATTAAAAGTAGAGAATGTAAAAGCAATTCCCCCCAATTCATTGGAGTTTAACTTCCTCGGTAAAGATTCAATCCGATATGAAAATACTGTTGAAGTAGAACCTGCTGTTTACAAGGAAATAAAAAAGTTTCAGGAAGGAAAAAAGGATAGTGATGATCTCTTTGACAAGTTAGATACCAGTAAATTGAATGCACATCTAAAGGAACTGATGCCTGGTCTTACTGCAAAAGTGTTCCGTACATACAATGCATCCATCACATTGGATAATGAATTAAACCAGGAAACTACAGAGGGAGATGTATTAAAGAAAAAAGTTTTTTATGATACAGCAAACAAGAAGGTTGCTATTATTTGTAACCATCAGCGTGCTGTGTCGAAGTCTCATGAATCACAAATGGACAAGCTAAAGGAAAAGCTTAGTGACCTTCAGGGTGTTGTAAAAGAGCTAAAGATAGATTTAGAAAGGGCAAGAAATGGAAAGCCTCCTCTGAAAGATGCTGATGGAAAACAGAAGAGAAATTTGACCCCGGAAGCGTTACAGAAGAAGATAGCTGATGCCAATAAAAAGATTGATAAAATAAAATTGGATATGCAAACCAAAGACGACATGAAGACAATTGCATTGGGAACATCAAAAATCAACTATCTTGATCCTAGGATCACCGTTGCATGGTGCAAGCGACATGAAGTTCCCATTGAGAAGATATTCCAAAAGTCTCTCCTGGCTAAGTTTGCTTGGGCAATGGATGTCGAGCCTGACTTCCGATTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

839

Amino Acids

94.75

Weight (kDa)

9.37

Isoelectric Point (pI)

32.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Topoisom_I_N PF02919 294 - 506 1.3e-94 Eukaryotic DNA topoisomerase I, DNA binding fragment
Topoisom_I PF01028 509 - 732 1.3e-95 Eukaryotic DNA topoisomerase I, catalytic core
Topo_C_assoc PF14370 769 - 817 1.2e-22 C-terminal topoisomerase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 646
Acc36I ACCTGC 2 cut(s) 646, 1855
AccB7I CCANNNNNTGG 1 cut(s) 623
AccII CGCG 1 cut(s) 1365
AciI CCGC 2 cut(s) 240, 1648
AclWI GGATC 5 cut(s) 793, 1393, 1475, 2390, 2411
AcsI RAATTY 3 cut(s) 13, 358, 2263
AcuI CTGAAG 3 cut(s) 1267, 1364, 2156
AcyI GRCGYC 1 cut(s) 221
AfaI GTAC 2 cut(s) 159, 1984
AfiI CCNNNNNNNGG 6 cut(s) 623, 1334, 1417, 1418, 1539, 2415
AjnI CCWGG 6 cut(s) 226, 859, 1297, 1957, 2022, 2466
AleI CACNNNNGTG 1 cut(s) 906
AluBI AGCT 7 cut(s) 546, 1342, 1658, 2149, 2161, 2191, 2297
AluI AGCT 7 cut(s) 546, 1342, 1658, 2149, 2161, 2191, 2297
Alw21I GWGCWC 2 cut(s) 527, 903
Alw26I GTCTC 6 cut(s) 123, 154, 286, 1050, 2130, 2466
AlwI GGATC 5 cut(s) 793, 1393, 1475, 2390, 2411
AoxI GGCC 2 cut(s) 569, 1312
ApeKI GCWGC 8 cut(s) 71, 242, 320, 431, 1520, 1607, 1640, 1740
ApoI RAATTY 3 cut(s) 13, 358, 2263
Asp700I GAANNNNTTC 1 cut(s) 2450
AspA2I CCTAGG 1 cut(s) 2399
AspS9I GGNCC 1 cut(s) 857
AsuC2I CCSGG 2 cut(s) 1419, 2273
AsuHPI GGTGA 3 cut(s) 216, 1433, 2398
AvaII GGWCC 1 cut(s) 857
AvrII CCTAGG 1 cut(s) 2399
BbsI GAAGAC 2 cut(s) 624, 2363
Bbv12I GWGCWC 2 cut(s) 527, 903
BbvI GCAGC 8 cut(s) 83, 254, 307, 443, 1532, 1594, 1627, 1727
BccI CCATC 6 cut(s) 125, 217, 1250, 2006, 2112, 2240
BceAI ACGGC 1 cut(s) 1299
BcgI CGANNNNNNTGC 2 cut(s) 1667, 1701
BciT130I CCWGG 6 cut(s) 228, 861, 1299, 1959, 2024, 2468
BcnI CCSGG 2 cut(s) 1419, 2273
BcoDI GTCTC 6 cut(s) 123, 154, 286, 1050, 2130, 2466
BfaI CTAG 3 cut(s) 477, 575, 2400
BfmI CTRYAG 3 cut(s) 69, 321, 2031
BfuAI ACCTGC 2 cut(s) 646, 1855
BisI GCNGC 9 cut(s) 72, 243, 321, 432, 1521, 1608, 1641, 1649, 1741
BlnI CCTAGG 1 cut(s) 2399
BlsI GCNGC 9 cut(s) 73, 244, 322, 433, 1522, 1609, 1642, 1650, 1742
Bme1390I CCNGG 8 cut(s) 228, 861, 1299, 1419, 1959, 2024, 2273, 2468
Bme18I GGWCC 1 cut(s) 857
BmgT120I GGNCC 1 cut(s) 857
BmrFI CCNGG 8 cut(s) 228, 861, 1299, 1419, 1959, 2024, 2273, 2468
BmsI GCATC 9 cut(s) 83, 939, 1108, 1333, 1627, 1944, 2003, 2230, 2290
BpiI GAAGAC 2 cut(s) 624, 2363
BpuEI CTTGAG 1 cut(s) 166
BpuMI CCSGG 2 cut(s) 1419, 2273
BsaAI YACGTR 1 cut(s) 1510
BsaHI GRCGYC 1 cut(s) 221
BsaJI CCNNGG 6 cut(s) 227, 1309, 1315, 1801, 2271, 2399
BsaXI ACNNNNNCTCC 2 cut(s) 1342, 1372
Bsc4I CCNNNNNNNGG 6 cut(s) 623, 1334, 1417, 1418, 1539, 2415
Bse1I ACTGG 4 cut(s) 968, 1151, 1524, 1923
Bse3DI GCAATG 1 cut(s) 2493
BseBI CCWGG 6 cut(s) 228, 861, 1299, 1959, 2024, 2468
BseDI CCNNGG 6 cut(s) 227, 1309, 1315, 1801, 2271, 2399
BseGI GGATG 7 cut(s) 313, 1123, 1324, 1581, 1717, 1994, 2497
BseLI CCNNNNNNNGG 6 cut(s) 623, 1334, 1417, 1418, 1539, 2415
BseMI GCAATG 1 cut(s) 2493
BseMII CTCAG 3 cut(s) 134, 144, 585
BseNI ACTGG 4 cut(s) 968, 1151, 1524, 1923
BseRI GAGGAG 4 cut(s) 1007, 1244, 1363, 2220
BseXI GCAGC 8 cut(s) 83, 254, 307, 443, 1532, 1594, 1627, 1727
BsgI GTGCAG 2 cut(s) 1058, 1726
Bsh1236I CGCG 1 cut(s) 1365
BshFI GGCC 2 cut(s) 571, 1314
BsiHKAI GWGCWC 2 cut(s) 527, 903
BsiSI CCGG 2 cut(s) 1418, 2273
BslI CCNNNNNNNGG 6 cut(s) 623, 1334, 1417, 1418, 1539, 2415
BsmAI GTCTC 6 cut(s) 123, 154, 286, 1050, 2130, 2466
BsmBI CGTCTC 1 cut(s) 123
BsmI GAATGC 2 cut(s) 1412, 1939
BsnI GGCC 2 cut(s) 571, 1314
Bsp1286I GDGCHC 2 cut(s) 527, 903
Bsp143I GATC 6 cut(s) 798, 1398, 1480, 1900, 2395, 2403
BspACI CCGC 2 cut(s) 240, 1648
BspANI GGCC 2 cut(s) 571, 1314
BspCNI CTCAG 3 cut(s) 133, 145, 586
BspFNI CGCG 1 cut(s) 1365
BspHI TCATGA 1 cut(s) 2128
BspMAI CTGCAG 2 cut(s) 73, 325
BspMI ACCTGC 2 cut(s) 646, 1855
BspPI GGATC 5 cut(s) 793, 1393, 1475, 2390, 2411
BsrDI GCAATG 1 cut(s) 2493
BsrI ACTGG 4 cut(s) 968, 1151, 1524, 1923
BssECI CCNNGG 6 cut(s) 227, 1309, 1315, 1801, 2271, 2399
BssMI GATC 6 cut(s) 798, 1398, 1480, 1900, 2395, 2403
BssNI GRCGYC 1 cut(s) 221
BssT1I CCWWGG 1 cut(s) 2399
Bst2UI CCWGG 6 cut(s) 228, 861, 1299, 1959, 2024, 2468
Bst4CI ACNGT 5 cut(s) 66, 1456, 1732, 1834, 2410
Bst6I CTCTTC 5 cut(s) 139, 1185, 1206, 1340, 2252
BstACI GRCGYC 1 cut(s) 221
BstBAI YACGTR 1 cut(s) 1510
BstC8I GCNNGC 5 cut(s) 653, 965, 1322, 2112, 2423
BstDEI CTNAG 8 cut(s) 120, 153, 594, 840, 1617, 1691, 2162, 2472
BstDSI CCRYGG 1 cut(s) 1315
BstF5I GGATG 7 cut(s) 313, 1123, 1324, 1581, 1717, 1994, 2497
BstFNI CGCG 1 cut(s) 1365
BstKTI GATC 6 cut(s) 801, 1401, 1483, 1903, 2398, 2406
BstMAI GTCTC 6 cut(s) 123, 154, 286, 1050, 2130, 2466
BstMBI GATC 6 cut(s) 798, 1398, 1480, 1900, 2395, 2403
BstMWI GCNNNNNNNGC 3 cut(s) 1084, 1694, 2477
BstNI CCWGG 6 cut(s) 228, 861, 1299, 1959, 2024, 2468
BstSCI CCNGG 8 cut(s) 226, 859, 1297, 1417, 1957, 2022, 2271, 2466
BstSFI CTRYAG 3 cut(s) 69, 321, 2031
BstSNI TACGTA 1 cut(s) 1510
BstUI CGCG 1 cut(s) 1365
BstV1I GCAGC 8 cut(s) 83, 254, 307, 443, 1532, 1594, 1627, 1727
BstV2I GAAGAC 2 cut(s) 624, 2363
BstX2I RGATCY 2 cut(s) 798, 1398
BstXI CCANNNNNNTGG 2 cut(s) 1786, 2005
BstYI RGATCY 2 cut(s) 798, 1398
BsuRI GGCC 2 cut(s) 571, 1314
BtgI CCRYGG 1 cut(s) 1315
BtsCI GGATG 7 cut(s) 313, 1123, 1324, 1581, 1717, 1994, 2497
BtsI GCAGTG 1 cut(s) 1020
BtsIMutI CAGTG 1 cut(s) 1020
BveI ACCTGC 2 cut(s) 646, 1855
Cac8I GCNNGC 5 cut(s) 653, 965, 1322, 2112, 2423
CciI TCATGA 1 cut(s) 2128
Cfr13I GGNCC 1 cut(s) 857
CseI GACGC 2 cut(s) 210, 491
Csp6I GTAC 2 cut(s) 158, 1983
CviAII CATG 7 cut(s) 1100, 1445, 1461, 2129, 2353, 2415, 2429
CviQI GTAC 2 cut(s) 158, 1983
DdeI CTNAG 8 cut(s) 120, 153, 594, 840, 1617, 1691, 2162, 2472
DpnI GATC 6 cut(s) 800, 1400, 1482, 1902, 2397, 2405
DpnII GATC 6 cut(s) 798, 1398, 1480, 1900, 2395, 2403
Eam1104I CTCTTC 5 cut(s) 139, 1185, 1206, 1340, 2252
EarI CTCTTC 5 cut(s) 139, 1185, 1206, 1340, 2252
Eco105I TACGTA 1 cut(s) 1510
Eco130I CCWWGG 1 cut(s) 2399
Eco147I AGGCCT 1 cut(s) 571
Eco32I GATATC 1 cut(s) 1600
Eco47I GGWCC 1 cut(s) 857
Eco57I CTGAAG 3 cut(s) 1267, 1364, 2156
EcoO109I RGGNCCY 1 cut(s) 857
EcoRI GAATTC 1 cut(s) 13
EcoRII CCWGG 6 cut(s) 226, 859, 1297, 1957, 2022, 2466
EcoRV GATATC 1 cut(s) 1600
EcoT14I CCWWGG 1 cut(s) 2399
EcoT22I ATGCAT 1 cut(s) 1996
ErhI CCWWGG 1 cut(s) 2399
Esp3I CGTCTC 1 cut(s) 123
FaeI CATG 7 cut(s) 1103, 1448, 1464, 2132, 2356, 2418, 2432
FalI AAGNNNNNCTT 2 cut(s) 535, 567
FatI CATG 7 cut(s) 1099, 1444, 1460, 2128, 2352, 2414, 2428
FauI CCCGC 1 cut(s) 247
Fnu4HI GCNGC 9 cut(s) 72, 243, 321, 432, 1521, 1608, 1641, 1649, 1741
FokI GGATG 7 cut(s) 300, 1130, 1311, 1588, 1724, 1981, 2504
Fsp4HI GCNGC 9 cut(s) 72, 243, 321, 432, 1521, 1608, 1641, 1649, 1741
FspBI CTAG 3 cut(s) 477, 575, 2400
GluI GCNGC 9 cut(s) 72, 243, 321, 432, 1521, 1608, 1641, 1649, 1741
HaeIII GGCC 2 cut(s) 571, 1314
HapII CCGG 2 cut(s) 1418, 2273
HgaI GACGC 2 cut(s) 210, 491
Hin1I GRCGYC 1 cut(s) 221
Hin1II CATG 7 cut(s) 1103, 1448, 1464, 2132, 2356, 2418, 2432
HincII GTYRAC 2 cut(s) 846, 973
HindII GTYRAC 2 cut(s) 846, 973
HindIII AAGCTT 1 cut(s) 2159
HinfI GANTC 6 cut(s) 147, 335, 629, 1811, 2132, 2511
HpaII CCGG 2 cut(s) 1418, 2273
HphI GGTGA 3 cut(s) 216, 1433, 2398
Hpy166II GTNNAC 5 cut(s) 178, 846, 973, 1361, 1855
Hpy188III TCNNGA 9 cut(s) 363, 575, 790, 802, 1335, 1474, 1877, 2129, 2393
Hpy8I GTNNAC 5 cut(s) 178, 846, 973, 1361, 1855
HpyCH4III ACNGT 5 cut(s) 66, 1456, 1732, 1834, 2410
HpyCH4IV ACGT 1 cut(s) 1509
HpyF10VI GCNNNNNNNGC 3 cut(s) 1084, 1694, 2477
HpyF3I CTNAG 8 cut(s) 120, 153, 594, 840, 1617, 1691, 2162, 2472
HpySE526I ACGT 1 cut(s) 1509
Hsp92I GRCGYC 1 cut(s) 221
Hsp92II CATG 7 cut(s) 1103, 1448, 1464, 2132, 2356, 2418, 2432
Kzo9I GATC 6 cut(s) 798, 1398, 1480, 1900, 2395, 2403
Lsp1109I GCAGC 8 cut(s) 83, 254, 307, 443, 1532, 1594, 1627, 1727
LweI GCATC 9 cut(s) 83, 939, 1108, 1333, 1627, 1944, 2003, 2230, 2290
MaeI CTAG 3 cut(s) 477, 575, 2400
MaeII ACGT 1 cut(s) 1509
MaeIII GTNAC 7 cut(s) 222, 479, 1369, 1456, 2099, 2165, 2280
MalI GATC 6 cut(s) 800, 1400, 1482, 1902, 2397, 2405
MboI GATC 6 cut(s) 798, 1398, 1480, 1900, 2395, 2403
MfeI CAATTG 1 cut(s) 2361
MflI RGATCY 2 cut(s) 798, 1398
MhlI GDGCHC 2 cut(s) 527, 903
MlyI GAGTC 2 cut(s) 156, 638
MmeI TCCRAC 2 cut(s) 604, 1255
Mph1103I ATGCAT 1 cut(s) 1996
MroXI GAANNNNTTC 1 cut(s) 2450
MseI TTAA 8 cut(s) 288, 441, 609, 1535, 1748, 1794, 2018, 2048
MslI CAYNNNNRTG 2 cut(s) 906, 2109
MspI CCGG 2 cut(s) 1418, 2273
MspR9I CCNGG 8 cut(s) 228, 861, 1299, 1419, 1959, 2024, 2273, 2468
MunI CAATTG 1 cut(s) 2361
Mva1269I GAATGC 2 cut(s) 1412, 1939
MvaI CCWGG 6 cut(s) 228, 861, 1299, 1959, 2024, 2468
MvnI CGCG 1 cut(s) 1365
MwoI GCNNNNNNNGC 3 cut(s) 1084, 1694, 2477
NciI CCSGG 2 cut(s) 1419, 2273
NdeII GATC 6 cut(s) 798, 1398, 1480, 1900, 2395, 2403
NlaIII CATG 7 cut(s) 1103, 1448, 1464, 2132, 2356, 2418, 2432
NmeAIII GCCGAG 1 cut(s) 1420
NmuCI GTSAC 3 cut(s) 222, 479, 2165
NsiI ATGCAT 1 cut(s) 1996
OliI CACNNNNGTG 1 cut(s) 906
PagI TCATGA 1 cut(s) 2128
PaqCI CACCTGC 1 cut(s) 646
PceI AGGCCT 1 cut(s) 571
PctI GAATGC 2 cut(s) 1412, 1939
PdmI GAANNNNTTC 1 cut(s) 2450
PfeI GAWTC 4 cut(s) 335, 1811, 2132, 2511
PflMI CCANNNNNTGG 1 cut(s) 623
PkrI GCNGC 9 cut(s) 73, 244, 322, 433, 1522, 1609, 1642, 1650, 1742
PleI GAGTC 2 cut(s) 155, 637
PpsI GAGTC 2 cut(s) 155, 637
Ppu21I YACGTR 1 cut(s) 1510
PpuMI RGGWCCY 1 cut(s) 857
Psp5II RGGWCCY 1 cut(s) 857
Psp6I CCWGG 6 cut(s) 226, 859, 1297, 1957, 2022, 2466
PspGI CCWGG 6 cut(s) 226, 859, 1297, 1957, 2022, 2466
PspPI GGNCC 1 cut(s) 857
PspPPI RGGWCCY 1 cut(s) 857
PstI CTGCAG 2 cut(s) 73, 325
PsuI RGATCY 2 cut(s) 798, 1398
RsaI GTAC 2 cut(s) 159, 1984
RsaNI GTAC 2 cut(s) 158, 1983
RseI CAYNNNNRTG 2 cut(s) 906, 2109
SaqAI TTAA 8 cut(s) 288, 441, 609, 1535, 1748, 1794, 2018, 2048
SatI GCNGC 9 cut(s) 72, 243, 321, 432, 1521, 1608, 1641, 1649, 1741
Sau3AI GATC 6 cut(s) 798, 1398, 1480, 1900, 2395, 2403
Sau96I GGNCC 1 cut(s) 857
SchI GAGTC 2 cut(s) 156, 638
ScrFI CCNGG 8 cut(s) 228, 861, 1299, 1419, 1959, 2024, 2273, 2468
SduI GDGCHC 2 cut(s) 527, 903
SfaNI GCATC 9 cut(s) 83, 939, 1108, 1333, 1627, 1944, 2003, 2230, 2290
SfcI CTRYAG 3 cut(s) 69, 321, 2031
SinI GGWCC 1 cut(s) 857
SmiMI CAYNNNNRTG 2 cut(s) 906, 2109
SmlI CTYRAG 1 cut(s) 181
SmoI CTYRAG 1 cut(s) 181
SnaBI TACGTA 1 cut(s) 1510
SseBI AGGCCT 1 cut(s) 571
SsiI CCGC 2 cut(s) 240, 1648
SspMI CTAG 3 cut(s) 477, 575, 2400
StuI AGGCCT 1 cut(s) 571
StyD4I CCNGG 8 cut(s) 226, 859, 1297, 1417, 1957, 2022, 2271, 2466
StyI CCWWGG 1 cut(s) 2399
TaaI ACNGT 5 cut(s) 66, 1456, 1732, 1834, 2410
TaiI ACGT 1 cut(s) 1512
TaqI TCGA 4 cut(s) 521, 1677, 2120, 2496
TauI GCSGC 1 cut(s) 1651
TfiI GAWTC 4 cut(s) 335, 1811, 2132, 2511
Tru1I TTAA 8 cut(s) 288, 441, 609, 1535, 1748, 1794, 2018, 2048
Tru9I TTAA 8 cut(s) 288, 441, 609, 1535, 1748, 1794, 2018, 2048
TscAI CASTG 1 cut(s) 1020
TseFI GTSAC 3 cut(s) 222, 479, 2165
TseI GCWGC 8 cut(s) 71, 242, 320, 431, 1520, 1607, 1640, 1740
Tsp45I GTSAC 3 cut(s) 222, 479, 2165
TspGWI ACGGA 1 cut(s) 1970
TspRI CASTG 1 cut(s) 1020
Van91I CCANNNNNTGG 1 cut(s) 623
VpaK11BI GGWCC 1 cut(s) 857
XapI RAATTY 3 cut(s) 13, 358, 2263
XbaI TCTAGA 1 cut(s) 574
XcmI CCANNNNNNNNNTGG 1 cut(s) 1143
XmaJI CCTAGG 1 cut(s) 2399
XmnI GAANNNNTTC 1 cut(s) 2450
XspI CTAG 3 cut(s) 477, 575, 2400
Zsp2I ATGCAT 1 cut(s) 1996
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.