Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr13

Orthogroup ID

OG0005383

Physical Location & Seq

Genomic Coordinates Reverse (-)

11109879 .. 11115943

Gene Structure 6065 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom13g15260.14

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2652 bp

ATGGCTGTTCAGACTTCTACTAAACCGAATGTATATGAAGACGAGGATGATGAACCTTTAGTTTTCAAACGGTGCAGCACAAAATCTAAACCCAATCAATTAAACGCCGAAGCAAAGAAAATACCGGCTCAGAGGCAAGTTGGACAACCAGGGAAGCAGGTATCTGAACACCGTTCTTCAAATGGTCTAAACTCGAGTGTTCAAAAGGGTAAGATGGTTCCATCAACCAAATCACCACCAGTAAAATCTCCGCTAGCAAGCCCAAAAGCTTCAACTTCATCTGCTGGGGCATCACCAGTATCAAATTCAAAAGCTTCAACTTCATCTAGGGCATCACCAGTACCCAAATCACCACCGTCGACTACATTAGATGGTCATTCTAAACGGTTATCAGAACAGAATAAGTCTACTACAATTAAGAAGGAAATTAATTCTATTGAGCATCCTGCTCCAGGAAATAGTGATTCTGAAGATGAAAAACCGATAGGTGCCAGACTGGGGAAAGTGAAACCTTCTGAAGATTCAGATGATGATAAACCTTTATCATCAAGGATTGCACCAAAGTCCAAGGTGGGAACATCAGGCAGTCAGCCTTATGATTCGAAAGAAAGGAAGCCCGTTGTTTCAAAAGTTCAGAAGAATGGTTCCAGCACAATAGATAAAGGCAAGGCTCCATCTGTGGTCTCTAGTAAGAGGCCTCTGGATAAGGCCAATTCTTCTGAGAACTCATCAGCTAAAAGGCCAAAAGTTTCAGATTCTTCTACATCTGTAAAGAATAAGCCAGTATCGGCCAAACAAGAACTAAAGGAAGAAGATGATGATGATGACTTCATTCCAATTTCTCAGAGGAGTAAGAAAGTTGCATCGTATAGTAAATCATCTCTGACAAAGCAAACCGTAACCAAAGTTGGTTCATCCTCAATCAAGAAAACGATCAAGAAGAGCCAAAAAGCATCAAAATTTTCAAAGTATTCTAAATCGACCACAAAGCCACCGAGCTCTAATGATGGGCAGACAAAATGGACAACTTTAGAACACAATGGTGTCATTTTCCCACCTCCATACAAGCCTCATGGGGTAAAGATGCTTTATAATGGGAAGCCAGTCACCTTGACTCCGGAACAAGAGGAGGTTGCAACAATGTATGCAGTGATGAAAGATACAGATTATGTGCAGAAAGAAACATTCAGAAAAAATTTCTGGGCTGATTGGCATAAGTTGCTTGGGAAGAACCATGTAATTCAGAAATTGGATGCTTGTGATTTTACCCCAATATATGACTGGTATCAGAATGAAAAGGAAAAGAAGAAACAAATGAGTACAGAAGAGAAGAAGGCCTTGAAGGAGGAGAAACTAAAACAAGAGGAGAAATATATGTGGGCTCGCGTTGATGGTAACCAAGAAAAGGTTGGAAACTTCAGAGTTGAACCACCTGGGTTATTCCGAGGTCGTGGAGAGCATCCAAAGTCGGGAAAGCTGAAAAGACGGATTCGTCCAAGTGATGTTACAATTAATATAGGAAAGAATGCCCCAATTCCAGAGTGTCCCATCCCTGGTGAAAGCTGGAAAGAAGTAAGGCATGACAATACAGTCACATGGTTAGCTTTCTGGAACGATCCAATTAATCAAAGGGAATTCAAATACGTGTTTCTGGCACCTAGTAGTAACTTGAAGGGTTTAAGTGACATGCAGAAATACGAAAAAGCACGGAGATTGAAGGACCATATAGGAAAAATCAGGGCTTCATACACCAAGGATTTTACTAGTAAAGATGTAACTAAGCGGCAGATAGCTGTTGCTACCTATCTCATTGATAAACTTGCTCTCAGGGCGGGTAATGAGAAGGATGATGATGAAGCCGATACTGTTGGTTGCTGCACTTTAAAAGTAGAGAATGTAAAAGCAATTCCCCCTAACTCATTGGAGTTTAACTTCCTTGGTAAAGACTCAATCAGATATGAAAATACTGTTGAAGTTGAGATTCCTGTTTACAAGGCAATTATACAGTTCCAGTCTGGGAAACGTGGCAGTCATGATCTCTTTGACATGTTGGATACCAGTAGATTGAATGCTCATCTAAAGAATGTGATGGATGGCCTTACAGCAAAAGTGTTCCGTACCTACAATGCATCTATCACTTTGGATGACATATTGAACAAGAAAACCAAAGACGGAGATCTTTCAGAGAAACTCGTTGTTTATCAGCATGCAAACAAAGAGGTTGCCATCATTTGTAATCATCAGCGGACTGTCTCAAAGACTCACAGTGCACAAATGTCCAAGTTAACAGAAAAGATTGATGACCTTCAGGGCATCCTGAAAGATCTGAAAATAGATTTGGACAGGGCCAAAAAAGGAAAGCCCCTACTGAAAGATGCTGATGGAAAGCAAAAGAAAAATTTGACCCCGGAAGCGTTGGAGAGGAAGATAGCTCAAACAAATGCAAAGATTGAAAAAATGGAACTGGATATGAGAACTAAAGAGGATCTGAAAACAGTGGCCTTGGGAACGTCGAAAATCAACTATCTTGACCCTAGGATCACCGTTGCTTGGTGCAAGCGGCATGAAGTTCCAATCGAGAAGATCTTCAACAAGTCCCTCCTCGCGAAGTTTTCTTGGGCAATGCCAGTGGAGCCTGACTTCAGATTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Topo_C_assoc Topoisom_I Topoisom_I_N

Protein Analysis

884

Amino Acids

98.83

Weight (kDa)

9.58

Isoelectric Point (pI)

39.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005383)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55310
fragaria_vesca	FvH4_4g16730 FvH4_4g16730
malus_domestica	MD00G1109500.v1.1 MD13G1176900.v1.1 MD16G1178600.v1.1
prunus_persica	Prupe.1G146000_v2.0.a1 Prupe.1G146000_v2.0.a1 Prupe.8G003200_v2.0.a1 Prupe.8G003200_v2.0.a1 Prupe.8G003200_v2.0.a1 Prupe.8G003200_v2.0.a1 Prupe.8G003200_v2.0.a1
pyrus_communis	pycom10g21080 pycom13g15260 pycom16g15010
rosa_chinensis	RchiOBHm_Chr4g0420301
rosa_laevigata	RLG00000003998 RLG00000007777 RLG00000007780
rosa_multiflora	Rmu_sc0001767.1_g000005
rosa_roxburghii	Rroxscaffold_5G00362940
rosa_rugosa	Rorug04G0163000 Rorug04G0163100 Rorug04G0163200
rosa_samantha	Rh4AG224100 Rh4BG227100 Rh4CG238200
rosa_wichuraiana	Rw4G019300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1092
AasI	GACNNNNNNGTC	2 cut(s)	1491, 1589
Acc36I	ACCTGC	1 cut(s)	148
AccB1I	GGYRCC	2 cut(s)	488, 1654
AccI	GTMKAC	2 cut(s)	359, 407
AccII	CGCG	2 cut(s)	1386, 2606
AccIII	TCCGGA	1 cut(s)	1117
AciI	CCGC	5 cut(s)	251, 1783, 1832, 2245, 2560
AclWI	GGATC	3 cut(s)	1610, 2493, 2546
AcoI	YGGCCR	1 cut(s)	789
AcsI	RAATTY	5 cut(s)	304, 959, 1195, 1634, 2398
AcuI	CTGAAG	5 cut(s)	489, 537, 1402, 2291, 2626
AfaI	GTAC	3 cut(s)	342, 1321, 2119
AfiI	CCNNNNNNNGG	6 cut(s)	452, 498, 1405, 1469, 1553, 2550
AflIII	ACRYGT	2 cut(s)	1644, 2046
AhlI	ACTAGT	1 cut(s)	1763
AjnI	CCWGG	4 cut(s)	148, 451, 1432, 1552
AjuI	GAANNNNNNNTTGG	2 cut(s)	2321, 2353
AleI	CACNNNNGTG	1 cut(s)	1041
AluBI	AGCT	9 cut(s)	269, 314, 734, 999, 1477, 1563, 1604, 1793, 2432
AluI	AGCT	9 cut(s)	269, 314, 734, 999, 1477, 1563, 1604, 1793, 2432
Alw21I	GWGCWC	2 cut(s)	1001, 2272
Alw26I	GTCTC	2 cut(s)	688, 2257
Alw44I	GTGCAC	1 cut(s)	2268
AlwI	GGATC	3 cut(s)	1610, 2493, 2546
AlwNI	CAGNNNCTG	1 cut(s)	2649
Ama87I	CYCGRG	1 cut(s)	193
Aor13HI	TCCGGA	1 cut(s)	1117
AoxI	GGCC	8 cut(s)	695, 708, 740, 789, 1335, 2095, 2346, 2499
ApaLI	GTGCAC	1 cut(s)	2268
ApeKI	GCWGC	2 cut(s)	75, 1875
ApoI	RAATTY	5 cut(s)	304, 959, 1195, 1634, 2398
AseI	ATTAAT	3 cut(s)	429, 1512, 1623
Asp700I	GAANNNNTTC	1 cut(s)	2585
AspA2I	CCTAGG	1 cut(s)	2534
AspS9I	GGNCC	2 cut(s)	1720, 2346
AsuC2I	CCSGG	1 cut(s)	2408
AsuHPI	GGTGA	7 cut(s)	225, 285, 327, 342, 1099, 1568, 2533
AsuII	TTCGAA	1 cut(s)	602
AsuNHI	GCTAGC	1 cut(s)	253
AvaI	CYCGRG	1 cut(s)	193
AvaII	GGWCC	1 cut(s)	1720
AvrII	CCTAGG	1 cut(s)	2534
BaeGI	GKGCMC	1 cut(s)	2272
BanI	GGYRCC	2 cut(s)	488, 1654
BanII	GRGCYC	2 cut(s)	1001, 1384
BbsI	GAAGAC	1 cut(s)	45
Bbv12I	GWGCWC	2 cut(s)	1001, 2272
BbvI	GCAGC	2 cut(s)	87, 1862
BciT130I	CCWGG	4 cut(s)	150, 453, 1434, 1554
BciVI	GTATCC	1 cut(s)	2047
BcnI	CCSGG	1 cut(s)	2408
BcoDI	GTCTC	2 cut(s)	688, 2257
BcuI	ACTAGT	1 cut(s)	1763
BfaI	CTAG	6 cut(s)	254, 327, 687, 1659, 1764, 2535
BfuAI	ACCTGC	1 cut(s)	148
BfuI	GTATCC	1 cut(s)	2047
BglII	AGATCT	3 cut(s)	2176, 2323, 2583
BisI	GCNGC	4 cut(s)	76, 1784, 1876, 2561
BlnI	CCTAGG	1 cut(s)	2534
BlsI	GCNGC	4 cut(s)	77, 1785, 1877, 2562
Bme1390I	CCNGG	5 cut(s)	150, 453, 1434, 1554, 2408
Bme18I	GGWCC	1 cut(s)	1720
BmeT110I	CYCGRG	1 cut(s)	193
BmgT120I	GGNCC	2 cut(s)	1720, 2346
BmiI	GGNNCC	6 cut(s)	219, 490, 646, 672, 1656, 2634
BmrFI	CCNGG	5 cut(s)	150, 453, 1434, 1554, 2408
BmrI	ACTGGG	1 cut(s)	506
BmtI	GCTAGC	1 cut(s)	257
BmuI	ACTGGG	1 cut(s)	506
BpiI	GAAGAC	1 cut(s)	45
BpmI	CTGGAG	1 cut(s)	435
Bpu14I	TTCGAA	1 cut(s)	602
BpuMI	CCSGG	1 cut(s)	2408
BsaAI	YACGTR	1 cut(s)	1645
BsaI	GGTCTC	1 cut(s)	688
BsaWI	WCCGGW	1 cut(s)	1117
BsaXI	ACNNNNNCTCC	2 cut(s)	1099, 1129
Bsc4I	CCNNNNNNNGG	6 cut(s)	452, 498, 1405, 1469, 1553, 2550
Bse118I	RCCGGY	1 cut(s)	124
Bse3DI	GCAATG	1 cut(s)	2628
BseAI	TCCGGA	1 cut(s)	1117
BseBI	CCWGG	4 cut(s)	150, 453, 1434, 1554
BseLI	CCNNNNNNNGG	6 cut(s)	452, 498, 1405, 1469, 1553, 2550
BseMI	GCAATG	1 cut(s)	2628
BseMII	CTCAG	4 cut(s)	143, 711, 857, 1840
BseRI	GAGGAG	5 cut(s)	862, 1142, 1361, 1379, 2591
BseSI	GKGCMC	1 cut(s)	2272
BseXI	GCAGC	2 cut(s)	87, 1862
BseYI	CCCAGC	1 cut(s)	284
BsgI	GTGCAG	3 cut(s)	94, 1193, 1861
Bsh1236I	CGCG	2 cut(s)	1386, 2606
BshFI	GGCC	8 cut(s)	697, 710, 742, 791, 1337, 2097, 2348, 2501
BshNI	GGYRCC	2 cut(s)	488, 1654
BsiHKAI	GWGCWC	2 cut(s)	1001, 2272
BsiHKCI	CYCGRG	1 cut(s)	193
BsiSI	CCGG	3 cut(s)	125, 1118, 2408
BslFI	GGGAC	2 cut(s)	1530, 2581
BslI	CCNNNNNNNGG	6 cut(s)	452, 498, 1405, 1469, 1553, 2550
BsmAI	GTCTC	2 cut(s)	688, 2257
BsmFI	GGGAC	2 cut(s)	1530, 2581
BsmI	GAATGC	2 cut(s)	1531, 2074
BsnI	GGCC	8 cut(s)	697, 710, 742, 791, 1337, 2097, 2348, 2501
Bso31I	GGTCTC	1 cut(s)	688
BsoBI	CYCGRG	1 cut(s)	193
Bsp119I	TTCGAA	1 cut(s)	602
Bsp1286I	GDGCHC	3 cut(s)	1001, 1384, 2272
Bsp13I	TCCGGA	1 cut(s)	1117
Bsp143I	GATC	8 cut(s)	933, 1615, 2035, 2176, 2323, 2485, 2538, 2583
Bsp68I	TCGCGA	1 cut(s)	2606
BspACI	CCGC	5 cut(s)	251, 1783, 1832, 2245, 2560
BspANI	GGCC	8 cut(s)	697, 710, 742, 791, 1337, 2097, 2348, 2501
BspCNI	CTCAG	4 cut(s)	142, 712, 856, 1839
BspEI	TCCGGA	1 cut(s)	1117
BspFNI	CGCG	2 cut(s)	1386, 2606
BspHI	TCATGA	1 cut(s)	2032
BspLI	GGNNCC	6 cut(s)	219, 490, 646, 672, 1656, 2634
BspMI	ACCTGC	1 cut(s)	148
BspOI	GCTAGC	1 cut(s)	257
BspPI	GGATC	3 cut(s)	1610, 2493, 2546
BspQI	GCTCTTC	1 cut(s)	935
BspT104I	TTCGAA	1 cut(s)	602
BspT107I	GGYRCC	2 cut(s)	488, 1654
BspTNI	GGTCTC	1 cut(s)	688
BsrDI	GCAATG	1 cut(s)	2628
BsrFI	RCCGGY	1 cut(s)	124
BssAI	RCCGGY	1 cut(s)	124
BssMI	GATC	8 cut(s)	933, 1615, 2035, 2176, 2323, 2485, 2538, 2583
BssT1I	CCWWGG	5 cut(s)	567, 1752, 1936, 2502, 2534
Bst2UI	CCWGG	4 cut(s)	150, 453, 1434, 1554
Bst6I	CTCTTC	2 cut(s)	935, 1320
BstAPI	GCANNNNNTGC	1 cut(s)	1219
BstBAI	YACGTR	1 cut(s)	1645
BstBI	TTCGAA	1 cut(s)	602
BstC8I	GCNNGC	5 cut(s)	255, 259, 1384, 2208, 2558
BstDEI	CTNAG	5 cut(s)	129, 720, 843, 1779, 1826
BstEII	GGTNACC	1 cut(s)	1394
BstENI	CCTNNNNNAGG	1 cut(s)	450
BstFNI	CGCG	2 cut(s)	1386, 2606
BstKTI	GATC	8 cut(s)	936, 1618, 2038, 2179, 2326, 2488, 2541, 2586
BstMAI	GTCTC	2 cut(s)	688, 2257
BstMBI	GATC	8 cut(s)	933, 1615, 2035, 2176, 2323, 2485, 2538, 2583
BstMWI	GCNNNNNNNGC	3 cut(s)	1219, 1829, 2632
BstNI	CCWGG	4 cut(s)	150, 453, 1434, 1554
BstNSI	RCATGY	3 cut(s)	1690, 2050, 2210
BstPI	GGTNACC	1 cut(s)	1394
BstSCI	CCNGG	5 cut(s)	148, 451, 1432, 1552, 2406
BstSLI	GKGCMC	1 cut(s)	2272
BstUI	CGCG	2 cut(s)	1386, 2606
BstV1I	GCAGC	2 cut(s)	87, 1862
BstV2I	GAAGAC	1 cut(s)	45
BstX2I	RGATCY	4 cut(s)	2176, 2323, 2485, 2583
BstYI	RGATCY	4 cut(s)	2176, 2323, 2485, 2583
BsuI	GTATCC	1 cut(s)	2047
BsuRI	GGCC	8 cut(s)	697, 710, 742, 791, 1337, 2097, 2348, 2501
BtsI	GCAGTG	1 cut(s)	1155
BtsIMutI	CAGTG	4 cut(s)	1155, 2272, 2502, 2634
BtuMI	TCGCGA	1 cut(s)	2606
BveI	ACCTGC	1 cut(s)	148
Cac8I	GCNNGC	5 cut(s)	255, 259, 1384, 2208, 2558
CaiI	CAGNNNCTG	1 cut(s)	2649
CciI	TCATGA	1 cut(s)	2032
Cfr10I	RCCGGY	1 cut(s)	124
Cfr13I	GGNCC	2 cut(s)	1720, 2346
Csp6I	GTAC	3 cut(s)	341, 1320, 2118
CspCI	CAANNNNNGTGG	2 cut(s)	2610, 2645
CviAII	CATG	9 cut(s)	1073, 1235, 1580, 1596, 1687, 2033, 2047, 2207, 2564
CviQI	GTAC	3 cut(s)	341, 1320, 2118
DdeI	CTNAG	5 cut(s)	129, 720, 843, 1779, 1826
DpnI	GATC	8 cut(s)	935, 1617, 2037, 2178, 2325, 2487, 2540, 2585
DpnII	GATC	8 cut(s)	933, 1615, 2035, 2176, 2323, 2485, 2538, 2583
DraI	TTTAAA	1 cut(s)	1884
DrdI	GACNNNNNNGTC	2 cut(s)	1491, 1589
DseDI	GACNNNNNNGTC	2 cut(s)	1491, 1589
EaeI	YGGCCR	1 cut(s)	789
Eam1104I	CTCTTC	2 cut(s)	935, 1320
EarI	CTCTTC	2 cut(s)	935, 1320
Ecl136II	GAGCTC	1 cut(s)	999
Eco130I	CCWWGG	5 cut(s)	567, 1752, 1936, 2502, 2534
Eco147I	AGGCCT	2 cut(s)	697, 1337
Eco24I	GRGCYC	2 cut(s)	1001, 1384
Eco31I	GGTCTC	1 cut(s)	688
Eco47I	GGWCC	1 cut(s)	1720
Eco53kI	GAGCTC	1 cut(s)	999
Eco57I	CTGAAG	5 cut(s)	489, 537, 1402, 2291, 2626
Eco88I	CYCGRG	1 cut(s)	193
Eco91I	GGTNACC	1 cut(s)	1394
EcoICRI	GAGCTC	1 cut(s)	999
EcoNI	CCTNNNNNAGG	1 cut(s)	450
EcoO65I	GGTNACC	1 cut(s)	1394
EcoRI	GAATTC	1 cut(s)	1634
EcoRII	CCWGG	4 cut(s)	148, 451, 1432, 1552
EcoT14I	CCWWGG	5 cut(s)	567, 1752, 1936, 2502, 2534
EcoT22I	ATGCAT	1 cut(s)	2131
EcoT38I	GRGCYC	2 cut(s)	1001, 1384
ErhI	CCWWGG	5 cut(s)	567, 1752, 1936, 2502, 2534
FaeI	CATG	9 cut(s)	1076, 1238, 1583, 1599, 1690, 2036, 2050, 2210, 2567
FalI	AAGNNNNNCTT	2 cut(s)	1322, 1354
FaqI	GGGAC	2 cut(s)	1530, 2581
FatI	CATG	9 cut(s)	1072, 1234, 1579, 1595, 1686, 2032, 2046, 2206, 2563
FauI	CCCGC	1 cut(s)	1825
FblI	GTMKAC	2 cut(s)	359, 407
Fnu4HI	GCNGC	4 cut(s)	76, 1784, 1876, 2561
FriOI	GRGCYC	2 cut(s)	1001, 1384
Fsp4HI	GCNGC	4 cut(s)	76, 1784, 1876, 2561
FspBI	CTAG	6 cut(s)	254, 327, 687, 1659, 1764, 2535
GluI	GCNGC	4 cut(s)	76, 1784, 1876, 2561
GsaI	CCCAGC	1 cut(s)	288
GsuI	CTGGAG	1 cut(s)	435
HaeIII	GGCC	8 cut(s)	697, 710, 742, 791, 1337, 2097, 2348, 2501
HapII	CCGG	3 cut(s)	125, 1118, 2408
Hin1II	CATG	9 cut(s)	1076, 1238, 1583, 1599, 1690, 2036, 2050, 2210, 2567
HincII	GTYRAC	2 cut(s)	360, 2286
HindII	GTYRAC	2 cut(s)	360, 2286
HindIII	AAGCTT	2 cut(s)	267, 312
HpaI	GTTAAC	1 cut(s)	2286
HpaII	CCGG	3 cut(s)	125, 1118, 2408
HphI	GGTGA	7 cut(s)	225, 285, 327, 342, 1099, 1568, 2533
Hpy166II	GTNNAC	5 cut(s)	360, 408, 1990, 2270, 2286
Hpy8I	GTNNAC	5 cut(s)	360, 408, 1990, 2270, 2286
Hpy99I	CGWCG	2 cut(s)	361, 2515
HpyAV	CCTTC	8 cut(s)	415, 522, 1327, 1336, 1666, 1711, 1837, 2315
HpyCH4IV	ACGT	3 cut(s)	1644, 2023, 2510
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1219, 1829, 2632
HpyF3I	CTNAG	5 cut(s)	129, 720, 843, 1779, 1826
HpySE526I	ACGT	3 cut(s)	1644, 2023, 2510
Hsp92II	CATG	9 cut(s)	1076, 1238, 1583, 1599, 1690, 2036, 2050, 2210, 2567
Kpn2I	TCCGGA	1 cut(s)	1117
KspAI	GTTAAC	1 cut(s)	2286
Kzo9I	GATC	8 cut(s)	933, 1615, 2035, 2176, 2323, 2485, 2538, 2583
LguI	GCTCTTC	1 cut(s)	935
LmnI	GCTCC	3 cut(s)	454, 676, 2632
Lsp1109I	GCAGC	2 cut(s)	87, 1862
MaeI	CTAG	6 cut(s)	254, 327, 687, 1659, 1764, 2535
MaeII	ACGT	3 cut(s)	1644, 2023, 2510
MaeIII	GTNAC	8 cut(s)	898, 1105, 1394, 1504, 1591, 1664, 1682, 1774
MalI	GATC	8 cut(s)	935, 1617, 2037, 2178, 2325, 2487, 2540, 2585
MboI	GATC	8 cut(s)	933, 1615, 2035, 2176, 2323, 2485, 2538, 2583
MflI	RGATCY	4 cut(s)	2176, 2323, 2485, 2583
MhlI	GDGCHC	3 cut(s)	1001, 1384, 2272
MlyI	GAGTC	3 cut(s)	1108, 1940, 2254
MmeI	TCCRAC	4 cut(s)	121, 1390, 2031, 2397
Mph1103I	ATGCAT	1 cut(s)	2131
MroI	TCCGGA	1 cut(s)	1117
MroXI	GAANNNNTTC	1 cut(s)	2585
MseI	TTAA	9 cut(s)	101, 417, 429, 1512, 1623, 1679, 1883, 1929, 2285
MslI	CAYNNNNRTG	1 cut(s)	1041
MspA1I	CMGCKG	1 cut(s)	2245
MspI	CCGG	3 cut(s)	125, 1118, 2408
MspR9I	CCNGG	5 cut(s)	150, 453, 1434, 1554, 2408
Mva1269I	GAATGC	2 cut(s)	1531, 2074
MvaI	CCWGG	4 cut(s)	150, 453, 1434, 1554
MvnI	CGCG	2 cut(s)	1386, 2606
MwoI	GCNNNNNNNGC	3 cut(s)	1219, 1829, 2632
NciI	CCSGG	1 cut(s)	2408
NdeII	GATC	8 cut(s)	933, 1615, 2035, 2176, 2323, 2485, 2538, 2583
NheI	GCTAGC	1 cut(s)	253
NlaIII	CATG	9 cut(s)	1076, 1238, 1583, 1599, 1690, 2036, 2050, 2210, 2567
NlaIV	GGNNCC	6 cut(s)	219, 490, 646, 672, 1656, 2634
NmuCI	GTSAC	3 cut(s)	1105, 1591, 1682
NruI	TCGCGA	1 cut(s)	2606
NsiI	ATGCAT	1 cut(s)	2131
NspI	RCATGY	3 cut(s)	1690, 2050, 2210
NspV	TTCGAA	1 cut(s)	602
OliI	CACNNNNGTG	1 cut(s)	1041
PaeI	GCATGC	1 cut(s)	2210
PaeR7I	CTCGAG	1 cut(s)	193
PagI	TCATGA	1 cut(s)	2032
PceI	AGGCCT	2 cut(s)	697, 1337
PciI	ACATGT	1 cut(s)	2046
PciSI	GCTCTTC	1 cut(s)	935
PctI	GAATGC	2 cut(s)	1531, 2074
PdmI	GAANNNNTTC	1 cut(s)	2585
PfeI	GAWTC	7 cut(s)	464, 521, 599, 755, 1489, 1981, 2646
PfoI	TCCNGGA	1 cut(s)	451
PkrI	GCNGC	4 cut(s)	77, 1785, 1877, 2562
PleI	GAGTC	3 cut(s)	1108, 1940, 2254
PpsI	GAGTC	3 cut(s)	1108, 1940, 2254
Ppu21I	YACGTR	1 cut(s)	1645
PscI	ACATGT	1 cut(s)	2046
PshBI	ATTAAT	3 cut(s)	429, 1512, 1623
PsiI	TTATAA	1 cut(s)	1092
Psp124BI	GAGCTC	1 cut(s)	1001
Psp6I	CCWGG	4 cut(s)	148, 451, 1432, 1552
PspEI	GGTNACC	1 cut(s)	1394
PspFI	CCCAGC	1 cut(s)	284
PspGI	CCWGG	4 cut(s)	148, 451, 1432, 1552
PspN4I	GGNNCC	6 cut(s)	219, 490, 646, 672, 1656, 2634
PspPI	GGNCC	2 cut(s)	1720, 2346
PspXI	VCTCGAGB	1 cut(s)	193
PstNI	CAGNNNCTG	1 cut(s)	2649
PsuI	RGATCY	4 cut(s)	2176, 2323, 2485, 2583
RruI	TCGCGA	1 cut(s)	2606
RsaI	GTAC	3 cut(s)	342, 1321, 2119
RsaNI	GTAC	3 cut(s)	341, 1320, 2118
RseI	CAYNNNNRTG	1 cut(s)	1041
SacI	GAGCTC	1 cut(s)	1001
SalI	GTCGAC	1 cut(s)	358
SapI	GCTCTTC	1 cut(s)	935
SaqAI	TTAA	9 cut(s)	101, 417, 429, 1512, 1623, 1679, 1883, 1929, 2285
SatI	GCNGC	4 cut(s)	76, 1784, 1876, 2561
Sau3AI	GATC	8 cut(s)	933, 1615, 2035, 2176, 2323, 2485, 2538, 2583
Sau96I	GGNCC	2 cut(s)	1720, 2346
SchI	GAGTC	3 cut(s)	1108, 1940, 2254
ScrFI	CCNGG	5 cut(s)	150, 453, 1434, 1554, 2408
SduI	GDGCHC	3 cut(s)	1001, 1384, 2272
Sfr274I	CTCGAG	1 cut(s)	193
SfuI	TTCGAA	1 cut(s)	602
SinI	GGWCC	1 cut(s)	1720
SlaI	CTCGAG	1 cut(s)	193
SmiMI	CAYNNNNRTG	1 cut(s)	1041
SmlI	CTYRAG	1 cut(s)	193
SmoI	CTYRAG	1 cut(s)	193
SpeI	ACTAGT	1 cut(s)	1763
SphI	GCATGC	1 cut(s)	2210
SseBI	AGGCCT	2 cut(s)	697, 1337
SsiI	CCGC	5 cut(s)	251, 1783, 1832, 2245, 2560
SspMI	CTAG	6 cut(s)	254, 327, 687, 1659, 1764, 2535
SstI	GAGCTC	1 cut(s)	1001
StuI	AGGCCT	2 cut(s)	697, 1337
StyD4I	CCNGG	5 cut(s)	148, 451, 1432, 1552, 2406
StyI	CCWWGG	5 cut(s)	567, 1752, 1936, 2502, 2534
TaiI	ACGT	3 cut(s)	1647, 2026, 2513
TaqI	TCGA	6 cut(s)	194, 359, 602, 980, 2513, 2577
TatI	WGTACW	1 cut(s)	1319
TauI	GCSGC	2 cut(s)	1786, 2563
TfiI	GAWTC	7 cut(s)	464, 521, 599, 755, 1489, 1981, 2646
Tru1I	TTAA	9 cut(s)	101, 417, 429, 1512, 1623, 1679, 1883, 1929, 2285
Tru9I	TTAA	9 cut(s)	101, 417, 429, 1512, 1623, 1679, 1883, 1929, 2285
TscAI	CASTG	4 cut(s)	1155, 2272, 2502, 2634
TseFI	GTSAC	3 cut(s)	1105, 1591, 1682
TseI	GCWGC	2 cut(s)	75, 1875
Tsp45I	GTSAC	3 cut(s)	1105, 1591, 1682
TspGWI	ACGGA	4 cut(s)	1501, 1723, 2105, 2187
TspRI	CASTG	4 cut(s)	1155, 2272, 2502, 2634
VneI	GTGCAC	1 cut(s)	2268
VpaK11BI	GGWCC	1 cut(s)	1720
VspI	ATTAAT	3 cut(s)	429, 1512, 1623
XagI	CCTNNNNNAGG	1 cut(s)	450
XapI	RAATTY	5 cut(s)	304, 959, 1195, 1634, 2398
XceI	RCATGY	3 cut(s)	1690, 2050, 2210
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1278, 1406
XhoI	CTCGAG	1 cut(s)	193
XmaJI	CCTAGG	1 cut(s)	2534
XmiI	GTMKAC	2 cut(s)	359, 407
XmnI	GAANNNNTTC	1 cut(s)	2585
XspI	CTAG	6 cut(s)	254, 327, 687, 1659, 1764, 2535
Zsp2I	ATGCAT	1 cut(s)	2131

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.