Rh4CG238200

DNA topoisomerase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
Physical Location & Seq
Forward (+)
48294790 .. 48308491
13702 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG238200.1

Sequence Viewer

Length: 2793 bp
ATGGTGGTGCGCGGAGGTGTCAATTACCCTGCAGTGGAGTTGGTTGATTTCACTGAGTGGGAGTTTGATCCGACAGCAAAACGCTGCCATCGCATTCAATACATTTGCCGAACAAGTGATCTACATGCAAGTAGGGCACAAAGTTTGCTGATGGCTTATCAGAATAATATTAATCCAAATCTATCTGAAGATGACGAGGAACCTTTAGTTTTCAAACGGTCTACAGCATCTGATTTAGGTGATCTACATGCAAGTAGAGCACAAAGTTTGCTGATGGCTTATCGGAATAATATTAATCCAAATCTATCTGAAGATGACGAGGAACCTTTAGTTTTCAAACGGTCTGCAGCATCTAAACAGAATCAGTCAAACACAGACACAAAGAAATTATCGTCTCAGAGGTGTGATGGACAACCACGAAGAGTCTCTGAATTACACTCTTCCAATGGTGTAAACTCTAGTGTTCAAAAGGGTAAGATGGCTCCATCTACAAAGGCGTCACCAGGGAAATCTCCCACAGCAATCCCAAAAGAGTTATCAGAACAAAACAAGGCGATCTCTATTAAAGAGGAAAATATTCCTATTGAACACCGTGCTGAAGACAACAGTGATTCTGACGATGAAAAACCGATAAATTCCAGATTGAAGGCTAAAATAAACAATGTCAAAAAGGAAGATTCAGATGATGAAGATGATAAACCCTTATCGACAAGGGTTAATAAATCCAATGTGGGAACCTCAGGCTGTAAGCCAAGTGACGCTAGAGAAAGGAAGCCATTGGTTCAGAAGAATGGTTCAAGCACAATAGATAAAGGGAAAAGCTCTTCTTTGGTGTCAGGTAAGAGGCCTCTAGATAAGGCGAATCATGCTGAGCAGTCTTCAATTAAAAAGCCAAAAATTGCAGAGTCTTCAACATCTATAAAGAGCAAGCAGGTGTCGGCCAAAACAGAGCTGAAGGCAGATGATGATGACATGACACTTTCCCAGAGAATGAAGAAAGCCACATCTGCTAATAAATCATCTCTGACGAAGAAAACTGTAACTAAAGTCAGTTCATCCTCAATCCAGAAAAAGATCCAGAAAGGCAAAAAAACAGATAAGTTTTCAAAGTATTCTAAGTCAACAAGACAAGGACCTAGCTCTAATGATGGGCAGAAAAAATGGACTACTTTAGAGCACAATGGTGTCATTTTCCCACCTCCTTACAAGCCTCACGGGGTAAAGATGCTTTACAATGGCAAGCCAGTGAACTTGACTCCTGAACAAGAGGAGGTTGCAACAATGTATGCAGTGATGATAGATACAGAATATGTGCAGAAAAAAACTTTCAGAGACAACTTCTGGAATGATTGGCGTAAGTTGCTTGGGAAGAACCATGTAATTCAGAAATTGGATGCTTGTGATTTCAAACCAATATACGACTGGTATCAGAAAGAAAAGGAGAAGAAGAAACAAATGAGTACAGAAGAGAAGAAAGCTGTCAAGGAAGAGAAATTGAAACAAGAGGAGAAGTATATGTGGGCTGTTGTTGATGGTGTAAAAGAGAAGGTTGGAAACTTCAGAGTTGAACCACCTGGATTATTCCGAGGCCGTGGCGAGCATCCGAAGTCAGGAAAGCTGAAGAGGCGGATTAGTCCAAGTGAAGTTACAATAAATATAGGAAAGGATGCCGAGGTTCCCGAATGCCCCATTCCGGGTGAAAGGTGGAAAGAAGTAAGGCATGACAATACTGTTACATGGTTGGCTTTCTGGAATGATCCAATCAATCCAAAGGAGTTCAAATATGTATTTCTTGCAGCTAGTAGTGCCTTGAAGGGGCAAAGCGACAAGGAGAAATATGAGAAAGCAAGGAAGTTGAAGGACTACATAGGAGATATCAGGGCTGCATACACTAGGGATTTTACAAGTAGAGATCCTGCAAAGCGGCAAATAGCTGTTGCTACATATCTCATTGACAAACTTGCTCTGAGGGCTGGAAATGAGAAGGATGATGATGAAGCTGATACTGTTGGTTGCTGCACATTAAAAGTAGAGAACGTAAAAGCAATTCCCCCCAACTCATTGGAGTTTAACTTCCTTGGTAAAGATTCCATCCGATATGAAAATACTGTTGAAGTAGAACCTGCTGTTTACAAGGAAATAAAAAAGTTTCAGGAAGGGAAAAAGGACAGTGATGATCTCTTTGACAAGTTAGATACCAGTAAATTGAATGCACATCTAAAGGAACTGATGCCTGGTCTTACTGCAAAAGTGTTCCGTACATACAATGCATCTATCACATTGGATAATGAATTGTACCAGGAAACTGCAGAGGGAGATGTATTGAAGAAAAAAGTTTTTTATGATACAGCAAACAAGAAGGTTGCTATTATCTGTAATCATCAGCGGGCTGTGTCAAAGTCTCATGAATCACAAATGGACAAGCTAAAGGAAAAGCTTAGTGACCTTCAGAGTGTTTTAAAAGAGCTAAAGACAGATTTAGACAGGGCAAGAAATGGAAAGCCCCCACTGAAAGATGCTGATGGAAAGCAGAAGAGAAATTTGACCCCGGAAGCGTTACAGAAGAAGATAGCTGATGCCAATAAAAAGATTGATAAAGTAAAACTTGATATGCAAACCAAAGACGACATGAAAACAATTGCATTGGGAACATCAAAAATCAACTATCTTGATCCTAGAATCACCGTTGCATGGTGCAAACGACATGAAGTCCCCATTGAGAAGATATTCCAGAAGGCTCTCCTGGCAAAGTTTGCTTGGGCAATGGATGTCGATCCTGACTTCAGATTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

930

Amino Acids

105.29

Weight (kDa)

9.3

Isoelectric Point (pI)

37.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Topoisom_I_N PF02919 386 - 598 4.4e-95 Eukaryotic DNA topoisomerase I, DNA binding fragment
Topoisom_I PF01028 601 - 826 8e-96 Eukaryotic DNA topoisomerase I, catalytic core
Topo_C_assoc PF14370 861 - 930 6e-35 C-terminal topoisomerase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 922
Acc36I ACCTGC 2 cut(s) 922, 2131
AccI GTMKAC 1 cut(s) 221
AccII CGCG 1 cut(s) 12
AciI CCGC 4 cut(s) 12, 1627, 1924, 2386
AclWI GGATC 6 cut(s) 62, 1069, 1751, 1907, 2666, 2768
AcoI YGGCCR 1 cut(s) 939
AcsI RAATTY 2 cut(s) 634, 2539
AcuI CTGAAG 8 cut(s) 207, 330, 618, 974, 1543, 1640, 2432, 2767
AcyI GRCGYC 1 cut(s) 497
AdeI CACNNNGTG 1 cut(s) 57
AfaI GTAC 3 cut(s) 1462, 2260, 2297
AfiI CCNNNNNNNGG 6 cut(s) 34, 1610, 1693, 1694, 1815, 2691
AhdI GACNNNNNGTC 1 cut(s) 2708
AjnI CCWGG 5 cut(s) 502, 1573, 2233, 2298, 2742
AleI CACNNNNGTG 1 cut(s) 1182
Alw21I GWGCWC 2 cut(s) 262, 1179
Alw26I GTCTC 4 cut(s) 399, 430, 1326, 2406
AlwI GGATC 6 cut(s) 62, 1069, 1751, 1907, 2666, 2768
AlwNI CAGNNNCTG 2 cut(s) 230, 2790
AoxI GGCC 3 cut(s) 845, 939, 1588
ApeKI GCWGC 5 cut(s) 84, 347, 1796, 1883, 2016
ApoI RAATTY 2 cut(s) 634, 2539
AseI ATTAAT 2 cut(s) 171, 294
Asp700I GAANNNNTTC 2 cut(s) 576, 2726
AspLEI GCGC 1 cut(s) 12
AspS9I GGNCC 1 cut(s) 1133
AsuC2I CCSGG 2 cut(s) 1695, 2549
AsuHPI GGTGA 4 cut(s) 251, 492, 1709, 2674
AvaII GGWCC 1 cut(s) 1133
AxyI CCTNAGG 1 cut(s) 739
BaeGI GKGCMC 1 cut(s) 139
BbsI GAAGAC 3 cut(s) 606, 870, 900
Bbv12I GWGCWC 2 cut(s) 262, 1179
BbvI GCAGC 5 cut(s) 71, 359, 1808, 1870, 2003
BceAI ACGGC 1 cut(s) 1575
BciT130I CCWGG 5 cut(s) 504, 1575, 2235, 2300, 2744
BcnI CCSGG 2 cut(s) 1695, 2549
BcoDI GTCTC 4 cut(s) 399, 430, 1326, 2406
BfaI CTAG 7 cut(s) 459, 762, 851, 1137, 1800, 1893, 2676
BfmI CTRYAG 4 cut(s) 30, 222, 345, 2307
BfuAI ACCTGC 2 cut(s) 922, 2131
BisI GCNGC 6 cut(s) 85, 348, 1797, 1884, 1925, 2017
BlpI GCTNAGC 1 cut(s) 870
BlsI GCNGC 6 cut(s) 86, 349, 1798, 1885, 1926, 2018
Bme1390I CCNGG 7 cut(s) 504, 1575, 1695, 2235, 2300, 2549, 2744
Bme18I GGWCC 1 cut(s) 1133
BmeRI GACNNNNNGTC 1 cut(s) 2708
BmgT120I GGNCC 1 cut(s) 1133
BmiI GGNNCC 5 cut(s) 201, 324, 483, 736, 1677
BmrFI CCNGG 7 cut(s) 504, 1575, 1695, 2235, 2300, 2549, 2744
BpiI GAAGAC 3 cut(s) 606, 870, 900
Bpu1102I GCTNAGC 1 cut(s) 870
BpuMI CCSGG 2 cut(s) 1695, 2549
BsaBI GATNNNNATC 1 cut(s) 2772
BsaHI GRCGYC 1 cut(s) 497
BsaJI CCNNGG 6 cut(s) 503, 1585, 1591, 1671, 2077, 2547
Bsc4I CCNNNNNNNGG 6 cut(s) 34, 1610, 1693, 1694, 1815, 2691
Bse1I ACTGG 3 cut(s) 1244, 1427, 2199
Bse21I CCTNAGG 1 cut(s) 739
Bse3DI GCAATG 1 cut(s) 2769
Bse8I GATNNNNATC 1 cut(s) 2772
BseBI CCWGG 5 cut(s) 504, 1575, 2235, 2300, 2744
BseDI CCNNGG 6 cut(s) 503, 1585, 1591, 1671, 2077, 2547
BseGI GGATG 7 cut(s) 1055, 1399, 1600, 1672, 1993, 2091, 2773
BseJI GATNNNNATC 1 cut(s) 2772
BseLI CCNNNNNNNGG 6 cut(s) 34, 1610, 1693, 1694, 1815, 2691
BseMI GCAATG 1 cut(s) 2769
BseMII CTCAG 5 cut(s) 45, 410, 753, 861, 1958
BseNI ACTGG 3 cut(s) 1244, 1427, 2199
BseRI GAGGAG 2 cut(s) 1283, 1520
BseSI GKGCMC 1 cut(s) 139
BseXI GCAGC 5 cut(s) 71, 359, 1808, 1870, 2003
BsgI GTGCAG 2 cut(s) 1334, 2002
Bsh1236I CGCG 1 cut(s) 12
BshFI GGCC 3 cut(s) 847, 941, 1590
BsiHKAI GWGCWC 2 cut(s) 262, 1179
BsiSI CCGG 2 cut(s) 1694, 2549
BslFI GGGAC 1 cut(s) 2696
BslI CCNNNNNNNGG 6 cut(s) 34, 1610, 1693, 1694, 1815, 2691
BsmAI GTCTC 4 cut(s) 399, 430, 1326, 2406
BsmBI CGTCTC 1 cut(s) 399
BsmFI GGGAC 1 cut(s) 2696
BsmI GAATGC 3 cut(s) 93, 1688, 2215
BsnI GGCC 3 cut(s) 847, 941, 1590
Bsp1286I GDGCHC 3 cut(s) 139, 262, 1179
Bsp1720I GCTNAGC 1 cut(s) 870
BspACI CCGC 4 cut(s) 12, 1627, 1924, 2386
BspANI GGCC 3 cut(s) 847, 941, 1590
BspCNI CTCAG 5 cut(s) 46, 409, 752, 862, 1959
BspFNI CGCG 1 cut(s) 12
BspHI TCATGA 1 cut(s) 2404
BspLI GGNNCC 5 cut(s) 201, 324, 483, 736, 1677
BspMAI CTGCAG 3 cut(s) 34, 349, 2311
BspMI ACCTGC 2 cut(s) 922, 2131
BspPI GGATC 6 cut(s) 62, 1069, 1751, 1907, 2666, 2768
BspQI GCTCTTC 1 cut(s) 829
BsrDI GCAATG 1 cut(s) 2769
BsrI ACTGG 3 cut(s) 1244, 1427, 2199
BssECI CCNNGG 6 cut(s) 503, 1585, 1591, 1671, 2077, 2547
BssNI GRCGYC 1 cut(s) 497
BssT1I CCWWGG 1 cut(s) 2077
Bst2UI CCWGG 5 cut(s) 504, 1575, 2235, 2300, 2744
Bst6I CTCTTC 7 cut(s) 415, 445, 829, 1461, 1482, 1616, 2528
BstACI GRCGYC 1 cut(s) 497
BstAPI GCANNNNNTGC 1 cut(s) 2753
BstC8I GCNNGC 4 cut(s) 929, 1241, 1598, 2388
BstDEI CTNAG 7 cut(s) 54, 396, 739, 870, 1116, 1967, 2438
BstDSI CCRYGG 1 cut(s) 1591
BstF5I GGATG 7 cut(s) 1055, 1399, 1600, 1672, 1993, 2091, 2773
BstFNI CGCG 1 cut(s) 12
BstHHI GCGC 1 cut(s) 12
BstMAI GTCTC 4 cut(s) 399, 430, 1326, 2406
BstNI CCWGG 5 cut(s) 504, 1575, 2235, 2300, 2744
BstNSI RCATGY 2 cut(s) 128, 251
BstSCI CCNGG 7 cut(s) 502, 1573, 1693, 2233, 2298, 2547, 2742
BstSFI CTRYAG 4 cut(s) 30, 222, 345, 2307
BstSLI GKGCMC 1 cut(s) 139
BstUI CGCG 1 cut(s) 12
BstV1I GCAGC 5 cut(s) 71, 359, 1808, 1870, 2003
BstV2I GAAGAC 3 cut(s) 606, 870, 900
BstX2I RGATCY 2 cut(s) 1074, 1912
BstXI CCANNNNNNTGG 1 cut(s) 2062
BstYI RGATCY 2 cut(s) 1074, 1912
Bsu36I CCTNAGG 1 cut(s) 739
BsuRI GGCC 3 cut(s) 847, 941, 1590
BtgI CCRYGG 1 cut(s) 1591
BtgZI GCGATG 1 cut(s) 74
BtsCI GGATG 7 cut(s) 1055, 1399, 1600, 1672, 1993, 2091, 2773
BtsI GCAGTG 2 cut(s) 39, 1296
BtsIMutI CAGTG 7 cut(s) 39, 51, 613, 1251, 1296, 2176, 2507
BveI ACCTGC 2 cut(s) 922, 2131
Cac8I GCNNGC 4 cut(s) 929, 1241, 1598, 2388
CaiI CAGNNNCTG 2 cut(s) 230, 2790
CciI TCATGA 1 cut(s) 2404
CfoI GCGC 1 cut(s) 12
Cfr13I GGNCC 1 cut(s) 1133
CseI GACGC 2 cut(s) 486, 767
Csp6I GTAC 3 cut(s) 1461, 2259, 2296
CviQI GTAC 3 cut(s) 1461, 2259, 2296
DdeI CTNAG 7 cut(s) 54, 396, 739, 870, 1116, 1967, 2438
DraI TTTAAA 1 cut(s) 2460
DraIII CACNNNGTG 1 cut(s) 57
DriI GACNNNNNGTC 1 cut(s) 2708
EaeI YGGCCR 1 cut(s) 939
Eam1104I CTCTTC 7 cut(s) 415, 445, 829, 1461, 1482, 1616, 2528
Eam1105I GACNNNNNGTC 1 cut(s) 2708
EarI CTCTTC 7 cut(s) 415, 445, 829, 1461, 1482, 1616, 2528
EciI GGCGGA 1 cut(s) 1642
Eco130I CCWWGG 1 cut(s) 2077
Eco147I AGGCCT 1 cut(s) 847
Eco32I GATATC 1 cut(s) 1876
Eco47I GGWCC 1 cut(s) 1133
Eco57I CTGAAG 8 cut(s) 207, 330, 618, 974, 1543, 1640, 2432, 2767
Eco81I CCTNAGG 1 cut(s) 739
EcoO109I RGGNCCY 1 cut(s) 1133
EcoRII CCWGG 5 cut(s) 502, 1573, 2233, 2298, 2742
EcoRV GATATC 1 cut(s) 1876
EcoT14I CCWWGG 1 cut(s) 2077
EcoT22I ATGCAT 1 cut(s) 2272
ErhI CCWWGG 1 cut(s) 2077
Esp3I CGTCTC 1 cut(s) 399
FalI AAGNNNNNCTT 4 cut(s) 811, 843, 2589, 2621
FaqI GGGAC 1 cut(s) 2696
FauI CCCGC 1 cut(s) 2379
FblI GTMKAC 1 cut(s) 221
Fnu4HI GCNGC 6 cut(s) 85, 348, 1797, 1884, 1925, 2017
FokI GGATG 7 cut(s) 1042, 1406, 1587, 1679, 2000, 2078, 2780
Fsp4HI GCNGC 6 cut(s) 85, 348, 1797, 1884, 1925, 2017
FspBI CTAG 7 cut(s) 459, 762, 851, 1137, 1800, 1893, 2676
GlaI GCGC 1 cut(s) 11
GluI GCNGC 6 cut(s) 85, 348, 1797, 1884, 1925, 2017
HaeIII GGCC 3 cut(s) 847, 941, 1590
HapII CCGG 2 cut(s) 1694, 2549
HgaI GACGC 2 cut(s) 486, 767
HhaI GCGC 1 cut(s) 12
Hin1I GRCGYC 1 cut(s) 497
Hin6I GCGC 1 cut(s) 10
HinP1I GCGC 1 cut(s) 10
HincII GTYRAC 1 cut(s) 1122
HindII GTYRAC 1 cut(s) 1122
HindIII AAGCTT 1 cut(s) 2435
HpaII CCGG 2 cut(s) 1694, 2549
HphI GGTGA 4 cut(s) 251, 492, 1709, 2674
Hpy166II GTNNAC 5 cut(s) 222, 454, 1122, 1249, 2131
Hpy8I GTNNAC 5 cut(s) 222, 454, 1122, 1249, 2131
HpyCH4IV ACGT 1 cut(s) 2037
HpyF3I CTNAG 7 cut(s) 54, 396, 739, 870, 1116, 1967, 2438
HpySE526I ACGT 1 cut(s) 2037
Hsp92I GRCGYC 1 cut(s) 497
HspAI GCGC 1 cut(s) 10
LguI GCTCTTC 1 cut(s) 829
LmnI GCTCC 1 cut(s) 487
Lsp1109I GCAGC 5 cut(s) 71, 359, 1808, 1870, 2003
MaeI CTAG 7 cut(s) 459, 762, 851, 1137, 1800, 1893, 2676
MaeII ACGT 1 cut(s) 2037
MaeIII GTNAC 7 cut(s) 498, 755, 1039, 1645, 1732, 2441, 2556
MfeI CAATTG 1 cut(s) 2637
MflI RGATCY 2 cut(s) 1074, 1912
MhlI GDGCHC 3 cut(s) 139, 262, 1179
MlyI GAGTC 3 cut(s) 432, 914, 1249
MmeI TCCRAC 2 cut(s) 95, 1531
Mph1103I ATGCAT 1 cut(s) 2272
MroXI GAANNNNTTC 2 cut(s) 576, 2726
MseI TTAA 8 cut(s) 171, 294, 564, 717, 885, 2024, 2070, 2459
MslI CAYNNNNRTG 1 cut(s) 1182
MspA1I CMGCKG 1 cut(s) 2386
MspI CCGG 2 cut(s) 1694, 2549
MspR9I CCNGG 7 cut(s) 504, 1575, 1695, 2235, 2300, 2549, 2744
MunI CAATTG 1 cut(s) 2637
Mva1269I GAATGC 3 cut(s) 93, 1688, 2215
MvaI CCWGG 5 cut(s) 504, 1575, 2235, 2300, 2744
MvnI CGCG 1 cut(s) 12
NciI CCSGG 2 cut(s) 1695, 2549
NlaIV GGNNCC 5 cut(s) 201, 324, 483, 736, 1677
NmeAIII GCCGAG 1 cut(s) 1696
NmuCI GTSAC 3 cut(s) 498, 755, 2441
NsiI ATGCAT 1 cut(s) 2272
NspI RCATGY 2 cut(s) 128, 251
OliI CACNNNNGTG 1 cut(s) 1182
PagI TCATGA 1 cut(s) 2404
PaqCI CACCTGC 1 cut(s) 922
PceI AGGCCT 1 cut(s) 847
PciSI GCTCTTC 1 cut(s) 829
PctI GAATGC 3 cut(s) 93, 1688, 2215
PdmI GAANNNNTTC 2 cut(s) 576, 2726
PfeI GAWTC 8 cut(s) 361, 611, 677, 862, 2087, 2408, 2679, 2787
PkrI GCNGC 6 cut(s) 86, 349, 1798, 1885, 1926, 2018
PleI GAGTC 3 cut(s) 431, 913, 1249
PpsI GAGTC 3 cut(s) 431, 913, 1249
PpuMI RGGWCCY 1 cut(s) 1133
PshBI ATTAAT 2 cut(s) 171, 294
Psp5II RGGWCCY 1 cut(s) 1133
Psp6I CCWGG 5 cut(s) 502, 1573, 2233, 2298, 2742
PspGI CCWGG 5 cut(s) 502, 1573, 2233, 2298, 2742
PspN4I GGNNCC 5 cut(s) 201, 324, 483, 736, 1677
PspPI GGNCC 1 cut(s) 1133
PspPPI RGGWCCY 1 cut(s) 1133
PstI CTGCAG 3 cut(s) 34, 349, 2311
PstNI CAGNNNCTG 2 cut(s) 230, 2790
PsuI RGATCY 2 cut(s) 1074, 1912
RsaI GTAC 3 cut(s) 1462, 2260, 2297
RsaNI GTAC 3 cut(s) 1461, 2259, 2296
RseI CAYNNNNRTG 1 cut(s) 1182
SapI GCTCTTC 1 cut(s) 829
SaqAI TTAA 8 cut(s) 171, 294, 564, 717, 885, 2024, 2070, 2459
SatI GCNGC 6 cut(s) 85, 348, 1797, 1884, 1925, 2017
Sau96I GGNCC 1 cut(s) 1133
SchI GAGTC 3 cut(s) 432, 914, 1249
ScrFI CCNGG 7 cut(s) 504, 1575, 1695, 2235, 2300, 2549, 2744
SduI GDGCHC 3 cut(s) 139, 262, 1179
SfcI CTRYAG 4 cut(s) 30, 222, 345, 2307
SinI GGWCC 1 cut(s) 1133
SmiMI CAYNNNNRTG 1 cut(s) 1182
SseBI AGGCCT 1 cut(s) 847
SsiI CCGC 4 cut(s) 12, 1627, 1924, 2386
SspI AATATT 3 cut(s) 169, 292, 577
SspMI CTAG 7 cut(s) 459, 762, 851, 1137, 1800, 1893, 2676
StuI AGGCCT 1 cut(s) 847
StyD4I CCNGG 7 cut(s) 502, 1573, 1693, 2233, 2298, 2547, 2742
StyI CCWWGG 1 cut(s) 2077
TaiI ACGT 1 cut(s) 2040
TaqI TCGA 2 cut(s) 707, 2772
TatI WGTACW 1 cut(s) 1460
TauI GCSGC 1 cut(s) 1927
TfiI GAWTC 8 cut(s) 361, 611, 677, 862, 2087, 2408, 2679, 2787
Tru1I TTAA 8 cut(s) 171, 294, 564, 717, 885, 2024, 2070, 2459
Tru9I TTAA 8 cut(s) 171, 294, 564, 717, 885, 2024, 2070, 2459
TscAI CASTG 7 cut(s) 39, 58, 613, 1251, 1296, 2176, 2514
TseFI GTSAC 3 cut(s) 498, 755, 2441
TseI GCWGC 5 cut(s) 84, 347, 1796, 1883, 2016
Tsp45I GTSAC 3 cut(s) 498, 755, 2441
TspGWI ACGGA 1 cut(s) 2246
TspRI CASTG 7 cut(s) 39, 58, 613, 1251, 1296, 2176, 2514
VpaK11BI GGWCC 1 cut(s) 1133
VspI ATTAAT 2 cut(s) 171, 294
XapI RAATTY 2 cut(s) 634, 2539
XbaI TCTAGA 1 cut(s) 850
XceI RCATGY 2 cut(s) 128, 251
XcmI CCANNNNNNNNNTGG 1 cut(s) 1419
XmiI GTMKAC 1 cut(s) 221
XmnI GAANNNNTTC 2 cut(s) 576, 2726
XspI CTAG 7 cut(s) 459, 762, 851, 1137, 1800, 1893, 2676
Zsp2I ATGCAT 1 cut(s) 2272
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.