DNA topoisomerase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G55310 |
| fragaria_vesca | FvH4_4g16730 FvH4_4g16730 |
| malus_domestica | MD00G1109500.v1.1 MD13G1176900.v1.1 MD16G1178600.v1.1 |
| prunus_persica | Prupe.1G146000_v2.0.a1 Prupe.1G146000_v2.0.a1 Prupe.8G003200_v2.0.a1 Prupe.8G003200_v2.0.a1 Prupe.8G003200_v2.0.a1 Prupe.8G003200_v2.0.a1 Prupe.8G003200_v2.0.a1 |
| pyrus_communis | pycom10g21080 pycom13g15260 pycom16g15010 |
| rosa_chinensis | RchiOBHm_Chr4g0420301 |
| rosa_laevigata | RLG00000003998 RLG00000007777 RLG00000007780 |
| rosa_multiflora | Rmu_sc0001767.1_g000005 |
| rosa_roxburghii | Rroxscaffold_5G00362940 |
| rosa_rugosa | Rorug04G0163000 Rorug04G0163100 Rorug04G0163200 |
| rosa_samantha | Rh4AG224100 Rh4BG227100 Rh4CG238200 |
| rosa_wichuraiana | Rw4G019300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 772 |
| Acc36I | ACCTGC | 2 cut(s) | 772, 1981 |
| AccI | GTMKAC | 1 cut(s) | 71 |
| AciI | CCGC | 4 cut(s) | 404, 1477, 1774, 2236 |
| AclWI | GGATC | 5 cut(s) | 919, 1601, 1757, 2516, 2618 |
| AcoI | YGGCCR | 1 cut(s) | 789 |
| AcsI | RAATTY | 2 cut(s) | 484, 2389 |
| AcuI | CTGAAG | 9 cut(s) | 57, 180, 468, 824, 1393, 1490, 2282, 2339, 2617 |
| AcyI | GRCGYC | 1 cut(s) | 347 |
| AfaI | GTAC | 3 cut(s) | 1312, 2110, 2147 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 1460, 1543, 1544, 1665, 2541 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2558 |
| AjnI | CCWGG | 5 cut(s) | 352, 1423, 2083, 2148, 2592 |
| AleI | CACNNNNGTG | 1 cut(s) | 1032 |
| Alw21I | GWGCWC | 2 cut(s) | 112, 1029 |
| Alw26I | GTCTC | 5 cut(s) | 249, 280, 412, 1176, 2256 |
| AlwI | GGATC | 5 cut(s) | 919, 1601, 1757, 2516, 2618 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 80, 2640 |
| AoxI | GGCC | 4 cut(s) | 695, 789, 1438, 2238 |
| ApeKI | GCWGC | 5 cut(s) | 197, 443, 1646, 1733, 1866 |
| ApoI | RAATTY | 2 cut(s) | 484, 2389 |
| AseI | ATTAAT | 2 cut(s) | 21, 144 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 426, 2576 |
| AspS9I | GGNCC | 2 cut(s) | 983, 2238 |
| AsuC2I | CCSGG | 2 cut(s) | 1545, 2399 |
| AsuHPI | GGTGA | 4 cut(s) | 101, 342, 1559, 2524 |
| AvaII | GGWCC | 1 cut(s) | 983 |
| AxyI | CCTNAGG | 1 cut(s) | 589 |
| BbsI | GAAGAC | 4 cut(s) | 456, 720, 750, 2327 |
| Bbv12I | GWGCWC | 2 cut(s) | 112, 1029 |
| BbvI | GCAGC | 5 cut(s) | 209, 430, 1658, 1720, 1853 |
| BccI | CCATC | 8 cut(s) | 118, 251, 322, 343, 992, 1376, 1949, 2366 |
| BceAI | ACGGC | 2 cut(s) | 1425, 2225 |
| BciT130I | CCWGG | 5 cut(s) | 354, 1425, 2085, 2150, 2594 |
| BcnI | CCSGG | 2 cut(s) | 1545, 2399 |
| BcoDI | GTCTC | 5 cut(s) | 249, 280, 412, 1176, 2256 |
| BfaI | CTAG | 6 cut(s) | 309, 701, 987, 1650, 1743, 2526 |
| BfmI | CTRYAG | 3 cut(s) | 72, 195, 2157 |
| BfuAI | ACCTGC | 2 cut(s) | 772, 1981 |
| BisI | GCNGC | 6 cut(s) | 198, 444, 1647, 1734, 1775, 1867 |
| BlpI | GCTNAGC | 1 cut(s) | 720 |
| BlsI | GCNGC | 6 cut(s) | 199, 445, 1648, 1735, 1776, 1868 |
| Bme1390I | CCNGG | 7 cut(s) | 354, 1425, 1545, 2085, 2150, 2399, 2594 |
| Bme18I | GGWCC | 1 cut(s) | 983 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2558 |
| BmgT120I | GGNCC | 2 cut(s) | 983, 2238 |
| BmiI | GGNNCC | 5 cut(s) | 51, 174, 333, 586, 1527 |
| BmrFI | CCNGG | 7 cut(s) | 354, 1425, 1545, 2085, 2150, 2399, 2594 |
| BpiI | GAAGAC | 4 cut(s) | 456, 720, 750, 2327 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 720 |
| BpuMI | CCSGG | 2 cut(s) | 1545, 2399 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2622 |
| BsaHI | GRCGYC | 1 cut(s) | 347 |
| BsaI | GGTCTC | 1 cut(s) | 412 |
| BsaJI | CCNNGG | 6 cut(s) | 353, 1435, 1441, 1521, 1927, 2397 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 1460, 1543, 1544, 1665, 2541 |
| Bse1I | ACTGG | 4 cut(s) | 1094, 1277, 2049, 2460 |
| Bse21I | CCTNAGG | 1 cut(s) | 589 |
| Bse3DI | GCAATG | 1 cut(s) | 2619 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2622 |
| BseBI | CCWGG | 5 cut(s) | 354, 1425, 2085, 2150, 2594 |
| BseDI | CCNNGG | 6 cut(s) | 353, 1435, 1441, 1521, 1927, 2397 |
| BseGI | GGATG | 7 cut(s) | 905, 1249, 1450, 1522, 1843, 1941, 2623 |
| BseJI | GATNNNNATC | 1 cut(s) | 2622 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 1460, 1543, 1544, 1665, 2541 |
| BseMI | GCAATG | 1 cut(s) | 2619 |
| BseMII | CTCAG | 4 cut(s) | 260, 603, 711, 1808 |
| BseNI | ACTGG | 4 cut(s) | 1094, 1277, 2049, 2460 |
| BseRI | GAGGAG | 2 cut(s) | 1133, 1370 |
| BseXI | GCAGC | 5 cut(s) | 209, 430, 1658, 1720, 1853 |
| BsgI | GTGCAG | 2 cut(s) | 1184, 1852 |
| BshFI | GGCC | 4 cut(s) | 697, 791, 1440, 2240 |
| BsiHKAI | GWGCWC | 2 cut(s) | 112, 1029 |
| BsiSI | CCGG | 2 cut(s) | 1544, 2399 |
| BslFI | GGGAC | 1 cut(s) | 2546 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 1460, 1543, 1544, 1665, 2541 |
| BsmAI | GTCTC | 5 cut(s) | 249, 280, 412, 1176, 2256 |
| BsmBI | CGTCTC | 1 cut(s) | 249 |
| BsmFI | GGGAC | 1 cut(s) | 2546 |
| BsmI | GAATGC | 2 cut(s) | 1538, 2065 |
| BsnI | GGCC | 4 cut(s) | 697, 791, 1440, 2240 |
| Bso31I | GGTCTC | 1 cut(s) | 412 |
| Bsp1286I | GDGCHC | 2 cut(s) | 112, 1029 |
| Bsp143I | GATC | 7 cut(s) | 91, 924, 1606, 1762, 2026, 2521, 2623 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 720 |
| BspACI | CCGC | 4 cut(s) | 404, 1477, 1774, 2236 |
| BspANI | GGCC | 4 cut(s) | 697, 791, 1440, 2240 |
| BspCNI | CTCAG | 4 cut(s) | 259, 602, 712, 1809 |
| BspHI | TCATGA | 1 cut(s) | 2254 |
| BspLI | GGNNCC | 5 cut(s) | 51, 174, 333, 586, 1527 |
| BspMAI | CTGCAG | 2 cut(s) | 199, 2161 |
| BspMI | ACCTGC | 2 cut(s) | 772, 1981 |
| BspPI | GGATC | 5 cut(s) | 919, 1601, 1757, 2516, 2618 |
| BspQI | GCTCTTC | 1 cut(s) | 679 |
| BspTNI | GGTCTC | 1 cut(s) | 412 |
| BsrDI | GCAATG | 1 cut(s) | 2619 |
| BsrI | ACTGG | 4 cut(s) | 1094, 1277, 2049, 2460 |
| BssECI | CCNNGG | 6 cut(s) | 353, 1435, 1441, 1521, 1927, 2397 |
| BssMI | GATC | 7 cut(s) | 91, 924, 1606, 1762, 2026, 2521, 2623 |
| BssNI | GRCGYC | 1 cut(s) | 347 |
| BssT1I | CCWWGG | 1 cut(s) | 1927 |
| Bst2UI | CCWGG | 5 cut(s) | 354, 1425, 2085, 2150, 2594 |
| Bst4CI | ACNGT | 8 cut(s) | 69, 192, 458, 889, 1582, 1858, 1960, 2536 |
| Bst6I | CTCTTC | 6 cut(s) | 295, 679, 1311, 1332, 1466, 2378 |
| BstACI | GRCGYC | 1 cut(s) | 347 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2603 |
| BstC8I | GCNNGC | 4 cut(s) | 779, 1091, 1448, 2238 |
| BstDEI | CTNAG | 6 cut(s) | 246, 589, 720, 966, 1817, 2288 |
| BstDSI | CCRYGG | 1 cut(s) | 1441 |
| BstF5I | GGATG | 7 cut(s) | 905, 1249, 1450, 1522, 1843, 1941, 2623 |
| BstKTI | GATC | 7 cut(s) | 94, 927, 1609, 1765, 2029, 2524, 2626 |
| BstMAI | GTCTC | 5 cut(s) | 249, 280, 412, 1176, 2256 |
| BstMBI | GATC | 7 cut(s) | 91, 924, 1606, 1762, 2026, 2521, 2623 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 107, 716, 857, 1210, 1474, 1655, 1820, 2594, 2603 |
| BstNI | CCWGG | 5 cut(s) | 354, 1425, 2085, 2150, 2594 |
| BstNSI | RCATGY | 1 cut(s) | 101 |
| BstSCI | CCNGG | 7 cut(s) | 352, 1423, 1543, 2083, 2148, 2397, 2592 |
| BstSFI | CTRYAG | 3 cut(s) | 72, 195, 2157 |
| BstV1I | GCAGC | 5 cut(s) | 209, 430, 1658, 1720, 1853 |
| BstV2I | GAAGAC | 4 cut(s) | 456, 720, 750, 2327 |
| BstX2I | RGATCY | 2 cut(s) | 924, 1762 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1912 |
| BstYI | RGATCY | 2 cut(s) | 924, 1762 |
| Bsu36I | CCTNAGG | 1 cut(s) | 589 |
| BsuRI | GGCC | 4 cut(s) | 697, 791, 1440, 2240 |
| BtgI | CCRYGG | 1 cut(s) | 1441 |
| BtgZI | GCGATG | 1 cut(s) | 2037 |
| BtsCI | GGATG | 7 cut(s) | 905, 1249, 1450, 1522, 1843, 1941, 2623 |
| BtsI | GCAGTG | 1 cut(s) | 1146 |
| BtsIMutI | CAGTG | 4 cut(s) | 463, 1101, 1146, 2357 |
| BveI | ACCTGC | 2 cut(s) | 772, 1981 |
| Cac8I | GCNNGC | 4 cut(s) | 779, 1091, 1448, 2238 |
| CaiI | CAGNNNCTG | 2 cut(s) | 80, 2640 |
| CciI | TCATGA | 1 cut(s) | 2254 |
| Cfr13I | GGNCC | 2 cut(s) | 983, 2238 |
| CseI | GACGC | 2 cut(s) | 336, 617 |
| Csp6I | GTAC | 3 cut(s) | 1311, 2109, 2146 |
| CviQI | GTAC | 3 cut(s) | 1311, 2109, 2146 |
| DdeI | CTNAG | 6 cut(s) | 246, 589, 720, 966, 1817, 2288 |
| DpnI | GATC | 7 cut(s) | 93, 926, 1608, 1764, 2028, 2523, 2625 |
| DpnII | GATC | 7 cut(s) | 91, 924, 1606, 1762, 2026, 2521, 2623 |
| DraI | TTTAAA | 1 cut(s) | 2310 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2558 |
| EaeI | YGGCCR | 1 cut(s) | 789 |
| Eam1104I | CTCTTC | 6 cut(s) | 295, 679, 1311, 1332, 1466, 2378 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2558 |
| EarI | CTCTTC | 6 cut(s) | 295, 679, 1311, 1332, 1466, 2378 |
| EciI | GGCGGA | 1 cut(s) | 1492 |
| Eco130I | CCWWGG | 1 cut(s) | 1927 |
| Eco147I | AGGCCT | 1 cut(s) | 697 |
| Eco31I | GGTCTC | 1 cut(s) | 412 |
| Eco32I | GATATC | 1 cut(s) | 1726 |
| Eco47I | GGWCC | 1 cut(s) | 983 |
| Eco57I | CTGAAG | 9 cut(s) | 57, 180, 468, 824, 1393, 1490, 2282, 2339, 2617 |
| Eco81I | CCTNAGG | 1 cut(s) | 589 |
| EcoO109I | RGGNCCY | 1 cut(s) | 983 |
| EcoRII | CCWGG | 5 cut(s) | 352, 1423, 2083, 2148, 2592 |
| EcoRV | GATATC | 1 cut(s) | 1726 |
| EcoT14I | CCWWGG | 1 cut(s) | 1927 |
| EcoT22I | ATGCAT | 1 cut(s) | 2122 |
| ErhI | CCWWGG | 1 cut(s) | 1927 |
| Esp3I | CGTCTC | 1 cut(s) | 249 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 661, 693 |
| FaqI | GGGAC | 1 cut(s) | 2546 |
| FauI | CCCGC | 1 cut(s) | 2229 |
| FblI | GTMKAC | 1 cut(s) | 71 |
| Fnu4HI | GCNGC | 6 cut(s) | 198, 444, 1647, 1734, 1775, 1867 |
| FokI | GGATG | 7 cut(s) | 892, 1256, 1437, 1529, 1850, 1928, 2630 |
| Fsp4HI | GCNGC | 6 cut(s) | 198, 444, 1647, 1734, 1775, 1867 |
| FspBI | CTAG | 6 cut(s) | 309, 701, 987, 1650, 1743, 2526 |
| GluI | GCNGC | 6 cut(s) | 198, 444, 1647, 1734, 1775, 1867 |
| HaeIII | GGCC | 4 cut(s) | 697, 791, 1440, 2240 |
| HapII | CCGG | 2 cut(s) | 1544, 2399 |
| HgaI | GACGC | 2 cut(s) | 336, 617 |
| Hin1I | GRCGYC | 1 cut(s) | 347 |
| HincII | GTYRAC | 1 cut(s) | 972 |
| HindII | GTYRAC | 1 cut(s) | 972 |
| HindIII | AAGCTT | 1 cut(s) | 2285 |
| HpaII | CCGG | 2 cut(s) | 1544, 2399 |
| HphI | GGTGA | 4 cut(s) | 101, 342, 1559, 2524 |
| Hpy166II | GTNNAC | 5 cut(s) | 72, 304, 972, 1099, 1981 |
| Hpy8I | GTNNAC | 5 cut(s) | 72, 304, 972, 1099, 1981 |
| HpyCH4III | ACNGT | 8 cut(s) | 69, 192, 458, 889, 1582, 1858, 1960, 2536 |
| HpyCH4IV | ACGT | 1 cut(s) | 1887 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 107, 716, 857, 1210, 1474, 1655, 1820, 2594, 2603 |
| HpyF3I | CTNAG | 6 cut(s) | 246, 589, 720, 966, 1817, 2288 |
| HpySE526I | ACGT | 1 cut(s) | 1887 |
| Hsp92I | GRCGYC | 1 cut(s) | 347 |
| Kzo9I | GATC | 7 cut(s) | 91, 924, 1606, 1762, 2026, 2521, 2623 |
| LguI | GCTCTTC | 1 cut(s) | 679 |
| LmnI | GCTCC | 1 cut(s) | 337 |
| Lsp1109I | GCAGC | 5 cut(s) | 209, 430, 1658, 1720, 1853 |
| MaeI | CTAG | 6 cut(s) | 309, 701, 987, 1650, 1743, 2526 |
| MaeII | ACGT | 1 cut(s) | 1887 |
| MaeIII | GTNAC | 7 cut(s) | 348, 605, 889, 1495, 1582, 2291, 2406 |
| MalI | GATC | 7 cut(s) | 93, 926, 1608, 1764, 2028, 2523, 2625 |
| MboI | GATC | 7 cut(s) | 91, 924, 1606, 1762, 2026, 2521, 2623 |
| MfeI | CAATTG | 1 cut(s) | 2487 |
| MflI | RGATCY | 2 cut(s) | 924, 1762 |
| MhlI | GDGCHC | 2 cut(s) | 112, 1029 |
| MlyI | GAGTC | 3 cut(s) | 282, 764, 1099 |
| MmeI | TCCRAC | 1 cut(s) | 1381 |
| Mph1103I | ATGCAT | 1 cut(s) | 2122 |
| MroXI | GAANNNNTTC | 2 cut(s) | 426, 2576 |
| MseI | TTAA | 8 cut(s) | 21, 144, 414, 567, 735, 1874, 1920, 2309 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1032 |
| MspA1I | CMGCKG | 1 cut(s) | 2236 |
| MspI | CCGG | 2 cut(s) | 1544, 2399 |
| MspR9I | CCNGG | 7 cut(s) | 354, 1425, 1545, 2085, 2150, 2399, 2594 |
| MunI | CAATTG | 1 cut(s) | 2487 |
| Mva1269I | GAATGC | 2 cut(s) | 1538, 2065 |
| MvaI | CCWGG | 5 cut(s) | 354, 1425, 2085, 2150, 2594 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 107, 716, 857, 1210, 1474, 1655, 1820, 2594, 2603 |
| NciI | CCSGG | 2 cut(s) | 1545, 2399 |
| NdeII | GATC | 7 cut(s) | 91, 924, 1606, 1762, 2026, 2521, 2623 |
| NlaIV | GGNNCC | 5 cut(s) | 51, 174, 333, 586, 1527 |
| NmeAIII | GCCGAG | 1 cut(s) | 1546 |
| NmuCI | GTSAC | 3 cut(s) | 348, 605, 2291 |
| NsiI | ATGCAT | 1 cut(s) | 2122 |
| NspI | RCATGY | 1 cut(s) | 101 |
| OliI | CACNNNNGTG | 1 cut(s) | 1032 |
| PagI | TCATGA | 1 cut(s) | 2254 |
| PaqCI | CACCTGC | 1 cut(s) | 772 |
| PceI | AGGCCT | 1 cut(s) | 697 |
| PciSI | GCTCTTC | 1 cut(s) | 679 |
| PctI | GAATGC | 2 cut(s) | 1538, 2065 |
| PdmI | GAANNNNTTC | 2 cut(s) | 426, 2576 |
| PfeI | GAWTC | 7 cut(s) | 461, 527, 712, 1937, 2258, 2529, 2637 |
| PkrI | GCNGC | 6 cut(s) | 199, 445, 1648, 1735, 1776, 1868 |
| PleI | GAGTC | 3 cut(s) | 281, 763, 1099 |
| PpsI | GAGTC | 3 cut(s) | 281, 763, 1099 |
| PpuMI | RGGWCCY | 1 cut(s) | 983 |
| PshBI | ATTAAT | 2 cut(s) | 21, 144 |
| Psp5II | RGGWCCY | 1 cut(s) | 983 |
| Psp6I | CCWGG | 5 cut(s) | 352, 1423, 2083, 2148, 2592 |
| PspGI | CCWGG | 5 cut(s) | 352, 1423, 2083, 2148, 2592 |
| PspN4I | GGNNCC | 5 cut(s) | 51, 174, 333, 586, 1527 |
| PspPI | GGNCC | 2 cut(s) | 983, 2238 |
| PspPPI | RGGWCCY | 1 cut(s) | 983 |
| PstI | CTGCAG | 2 cut(s) | 199, 2161 |
| PstNI | CAGNNNCTG | 2 cut(s) | 80, 2640 |
| PsuI | RGATCY | 2 cut(s) | 924, 1762 |
| RsaI | GTAC | 3 cut(s) | 1312, 2110, 2147 |
| RsaNI | GTAC | 3 cut(s) | 1311, 2109, 2146 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1032 |
| SapI | GCTCTTC | 1 cut(s) | 679 |
| SaqAI | TTAA | 8 cut(s) | 21, 144, 414, 567, 735, 1874, 1920, 2309 |
| SatI | GCNGC | 6 cut(s) | 198, 444, 1647, 1734, 1775, 1867 |
| Sau3AI | GATC | 7 cut(s) | 91, 924, 1606, 1762, 2026, 2521, 2623 |
| Sau96I | GGNCC | 2 cut(s) | 983, 2238 |
| SchI | GAGTC | 3 cut(s) | 282, 764, 1099 |
| ScrFI | CCNGG | 7 cut(s) | 354, 1425, 1545, 2085, 2150, 2399, 2594 |
| SduI | GDGCHC | 2 cut(s) | 112, 1029 |
| SfcI | CTRYAG | 3 cut(s) | 72, 195, 2157 |
| SinI | GGWCC | 1 cut(s) | 983 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1032 |
| SseBI | AGGCCT | 1 cut(s) | 697 |
| SsiI | CCGC | 4 cut(s) | 404, 1477, 1774, 2236 |
| SspI | AATATT | 3 cut(s) | 19, 142, 427 |
| SspMI | CTAG | 6 cut(s) | 309, 701, 987, 1650, 1743, 2526 |
| StuI | AGGCCT | 1 cut(s) | 697 |
| StyD4I | CCNGG | 7 cut(s) | 352, 1423, 1543, 2083, 2148, 2397, 2592 |
| StyI | CCWWGG | 1 cut(s) | 1927 |
| TaaI | ACNGT | 8 cut(s) | 69, 192, 458, 889, 1582, 1858, 1960, 2536 |
| TaiI | ACGT | 1 cut(s) | 1890 |
| TaqI | TCGA | 2 cut(s) | 557, 2622 |
| TatI | WGTACW | 1 cut(s) | 1310 |
| TauI | GCSGC | 1 cut(s) | 1777 |
| TfiI | GAWTC | 7 cut(s) | 461, 527, 712, 1937, 2258, 2529, 2637 |
| Tru1I | TTAA | 8 cut(s) | 21, 144, 414, 567, 735, 1874, 1920, 2309 |
| Tru9I | TTAA | 8 cut(s) | 21, 144, 414, 567, 735, 1874, 1920, 2309 |
| TscAI | CASTG | 4 cut(s) | 463, 1101, 1146, 2364 |
| TseFI | GTSAC | 3 cut(s) | 348, 605, 2291 |
| TseI | GCWGC | 5 cut(s) | 197, 443, 1646, 1733, 1866 |
| Tsp45I | GTSAC | 3 cut(s) | 348, 605, 2291 |
| TspGWI | ACGGA | 1 cut(s) | 2096 |
| TspRI | CASTG | 4 cut(s) | 463, 1101, 1146, 2364 |
| VpaK11BI | GGWCC | 1 cut(s) | 983 |
| VspI | ATTAAT | 2 cut(s) | 21, 144 |
| XapI | RAATTY | 2 cut(s) | 484, 2389 |
| XbaI | TCTAGA | 1 cut(s) | 700 |
| XceI | RCATGY | 1 cut(s) | 101 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1269 |
| XmiI | GTMKAC | 1 cut(s) | 71 |
| XmnI | GAANNNNTTC | 2 cut(s) | 426, 2576 |
| XspI | CTAG | 6 cut(s) | 309, 701, 987, 1650, 1743, 2526 |
| Zsp2I | ATGCAT | 1 cut(s) | 2122 |