Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0005383

Physical Location & Seq

Genomic Coordinates Reverse (-)

22939704 .. 22941415

Gene Structure 1712 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1109500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1659 bp

ATGTCATCTGCTCAAGAAAATCGTAGTTTTGTTGCTCAAGAAACCAGTGATGATTTCGAAGACGAAAAACCTATCGCTGCTTCTCGACTGGTCAGGACCCAAGTATTATCCATCCGGGGTTCTCATGCAAACAGTGATGATTCCAAAGACGATAAACCGATAGCTACTGCCAGACAACTGGTGAAACCTTCTCAAGATTCGGAGGACGATGACGACGACGATGATAAACCTTTATCATCAAGGCTGCTGCTAACACCCAAGTCCAAGGGTGAAAAGAGGAAGAGGAAGAGGCCCCTAGATCACAAGGCCGATTCTTCACCTAAAAGGCCAAAAGTTTCACATGCTTGTTCTTCAACATCTACCCTAAAAATTACGGAGGAAAAAGATGACGACGAAGATGACGACTTGATTCCAATTTCCCAGAGGATCAAGGAACCTACCTTGTTGACAGAGAAGAAGGCAATGAAGGTCGGTTCATCCTCCACCAGGAAACCGATCAAAAAGGGCCAAAATGGTTTGAAACTTTCGAGTTGCCCTAAGTCGACGAATGTGCTACCGAGCTCTAATGATGGGCAGAAAAAATGGAAAACTTTGGTTCACAACGGTGTGATGTTTCCGCCTCCGTACGAGCCCCATGGTGTAAAGATGATGTATGAAGGGAAGCCGGTAGACTTGAGTCCTGAACAAGAGGAGGTCGCAACTATGTACGCCGTGATGAAAGATACAGATTACGTGCAGAAGAAGCAAACGTTCCGAAACAATTTTTGGAATGATTGGCGTAAGTTGCTCGGGGAGAACCACGTAATTCGGAGGTTGGATGGTTGTGATTTCACCCCAATATACGAGTGGTGTATGAAAGAAAAGGAAAACAGGAAACAAATGAGTAGGGAAGAGAAGAAGGCCGCGGGGGCGGAGAAAAAGAAACAAGAGGAGAAGTATGCGTGGGCGTTCGTTGATGGTGAAAAGGAGATAGTTGGAAGATTCAGAGTTGAACCTCCTGCATTGTTCAGAGGCCGAGGGGAGCATCCAAAATCGGGAAAGGTAAAAAGGCGGATTCTTCCGAGTGATGTTACGATCAACATAGGGCAGGATGCACCGGTTCCAGAATGTCCTGTCCCCGGCGAAAGGTGGAAAGAAGCGAGGCATGATGATACGGTTACATGGTTAGCTTTCTGGACAGATCCAATCACTCCAAAGAAATTCAAGTACGTGTATCTTGGGGAGAGTAGCTCCTTGAAGATAGAAAGTGACCAGAAGAAGTACGAGAATGCGAGGATGCTCAAGGACTACATTGGGAAAATCAGGGCAGATTACTCTAGGGATTTTACCAGTAAAGATTGCGCGAAGAGGCAGATAGCGGTTGCAACCTATCTCATCGATAAGCTTGCTCTGAGGGCGGGAAATGAAAAGGGAGAAGAGGAAGCTGATACTGTTGGTTGCTGCACATTGAAGGTAGAGCATGTGAAAGCAATCGCCCCTAACTCGTTGGAGTTTAACTTCCTTGGTAAAGATTCTATCAGATACCAAAATACCGTTGAAGTTGAGGTTCCTGTTTACAAGGAAATTAGACAGTTCCAGGCCGGGAAACGCGGTGCAACAGATGCCTGGCCTTACGGCAAAAGTGTTTCGTACCTACAATGCTTCTATCACATTGGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Topo_C_assoc Topoisom_I Topoisom_I_N

Protein Analysis

553

Amino Acids

62.91

Weight (kDa)

8.84

Isoelectric Point (pI)

46.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Topoisom_I_N	PF02919	193 - 406	1.4e-88	Eukaryotic DNA topoisomerase I, DNA binding fragment
Topoisom_I	PF01028	409 - 530	2.3e-50	Eukaryotic DNA topoisomerase I, catalytic core

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0005383)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G55310
fragaria_vesca	FvH4_4g16730 FvH4_4g16730
malus_domestica	MD00G1109500.v1.1 MD13G1176900.v1.1 MD16G1178600.v1.1
prunus_persica	Prupe.1G146000_v2.0.a1 Prupe.1G146000_v2.0.a1 Prupe.8G003200_v2.0.a1 Prupe.8G003200_v2.0.a1 Prupe.8G003200_v2.0.a1 Prupe.8G003200_v2.0.a1 Prupe.8G003200_v2.0.a1
pyrus_communis	pycom10g21080 pycom13g15260 pycom16g15010
rosa_chinensis	RchiOBHm_Chr4g0420301
rosa_laevigata	RLG00000003998 RLG00000007777 RLG00000007780
rosa_multiflora	Rmu_sc0001767.1_g000005
rosa_roxburghii	Rroxscaffold_5G00362940
rosa_rugosa	Rorug04G0163000 Rorug04G0163100 Rorug04G0163200
rosa_samantha	Rh4AG224100 Rh4BG227100 Rh4CG238200
rosa_wichuraiana	Rw4G019300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	2 cut(s)	542, 669
AccII	CGCG	3 cut(s)	905, 1343, 1590
AciI	CCGC	8 cut(s)	617, 903, 905, 911, 1051, 1358, 1397, 1590
AclI	AACGTT	1 cut(s)	749
AclWI	GGATC	2 cut(s)	434, 1175
AcsI	RAATTY	1 cut(s)	1199
AfaI	GTAC	5 cut(s)	626, 707, 1208, 1262, 1631
AfiI	CCNNNNNNNGG	4 cut(s)	486, 1034, 1118, 1125
AflIII	ACRYGT	1 cut(s)	1209
AgeI	ACCGGT	1 cut(s)	1096
AgsI	TTSAA	7 cut(s)	354, 520, 992, 1204, 1237, 1450, 1538
AjnI	CCWGG	3 cut(s)	485, 1575, 1604
AjuI	GAANNNNNNNTTGG	2 cut(s)	748, 780
AleI	CACNNNNGTG	1 cut(s)	603
AluBI	AGCT	6 cut(s)	164, 561, 1169, 1230, 1384, 1424
AluI	AGCT	6 cut(s)	164, 561, 1169, 1230, 1384, 1424
Alw21I	GWGCWC	1 cut(s)	563
AlwI	GGATC	2 cut(s)	434, 1175
Ama87I	CYCGRG	1 cut(s)	788
AoxI	GGCC	8 cut(s)	290, 306, 326, 505, 900, 1012, 1578, 1607
ApeKI	GCWGC	4 cut(s)	77, 244, 247, 1440
ApoI	RAATTY	1 cut(s)	1199
AsiGI	ACCGGT	1 cut(s)	1096
AspLEI	GCGC	1 cut(s)	1343
AspS9I	GGNCC	3 cut(s)	96, 291, 505
AsuC2I	CCSGG	3 cut(s)	116, 1119, 1582
AsuHPI	GGTGA	5 cut(s)	193, 281, 309, 823, 971
AsuII	TTCGAA	1 cut(s)	57
AvaI	CYCGRG	1 cut(s)	788
AvaII	GGWCC	1 cut(s)	96
BanII	GRGCYC	2 cut(s)	563, 633
BbsI	GAAGAC	1 cut(s)	66
Bbv12I	GWGCWC	1 cut(s)	563
BbvI	GCAGC	4 cut(s)	64, 231, 234, 1427
BccI	CCATC	4 cut(s)	119, 563, 812, 950
BceAI	ACGGC	2 cut(s)	695, 1630
BcgI	CGANNNNNNTGC	4 cut(s)	532, 566, 1367, 1401
BciT130I	CCWGG	3 cut(s)	487, 1577, 1606
BcnI	CCSGG	3 cut(s)	116, 1119, 1582
BfaI	CTAG	2 cut(s)	296, 1317
BglI	GCCNNNNNGGC	1 cut(s)	908
BisI	GCNGC	5 cut(s)	78, 245, 248, 903, 1441
BlsI	GCNGC	5 cut(s)	79, 246, 249, 904, 1442
Bme1390I	CCNGG	6 cut(s)	116, 487, 1119, 1577, 1582, 1606
Bme18I	GGWCC	1 cut(s)	96
BmeT110I	CYCGRG	1 cut(s)	788
BmgT120I	GGNCC	3 cut(s)	96, 291, 505
BmiI	GGNNCC	5 cut(s)	98, 293, 435, 1101, 1548
BmrFI	CCNGG	6 cut(s)	116, 487, 1119, 1577, 1582, 1606
BmsI	GCATC	4 cut(s)	1033, 1081, 1266, 1591
BoxI	GACNNNNGTC	1 cut(s)	675
BpiI	GAAGAC	1 cut(s)	66
BplI	GAGNNNNNCTC	2 cut(s)	1214, 1246
Bpu14I	TTCGAA	1 cut(s)	57
BpuEI	CTTGAG	4 cut(s)	21, 177, 694, 1265
BpuMI	CCSGG	3 cut(s)	116, 1119, 1582
Bsa29I	ATCGAT	1 cut(s)	1377
BsaAI	YACGTR	3 cut(s)	733, 802, 1210
BsaJI	CCNNGG	7 cut(s)	115, 264, 634, 903, 1015, 1117, 1501
BsaWI	WCCGGW	1 cut(s)	1096
Bsc4I	CCNNNNNNNGG	4 cut(s)	486, 1034, 1118, 1125
Bse118I	RCCGGY	2 cut(s)	664, 1096
Bse1I	ACTGG	4 cut(s)	45, 93, 183, 1329
Bse3DI	GCAATG	1 cut(s)	468
BseBI	CCWGG	3 cut(s)	487, 1577, 1606
BseCI	ATCGAT	1 cut(s)	1377
BseDI	CCNNGG	7 cut(s)	115, 264, 634, 903, 1015, 1117, 1501
BseGI	GGATG	6 cut(s)	111, 476, 823, 1024, 1096, 1281
BseLI	CCNNNNNNNGG	4 cut(s)	486, 1034, 1118, 1125
BseMI	GCAATG	1 cut(s)	468
BseMII	CTCAG	1 cut(s)	1382
BseNI	ACTGG	4 cut(s)	45, 93, 183, 1329
BseRI	GAGGAG	2 cut(s)	704, 944
BseXI	GCAGC	4 cut(s)	64, 231, 234, 1427
BsgI	GTGCAG	2 cut(s)	755, 1426
Bsh1236I	CGCG	3 cut(s)	905, 1343, 1590
BshFI	GGCC	8 cut(s)	292, 308, 328, 507, 902, 1014, 1580, 1609
BshTI	ACCGGT	1 cut(s)	1096
BshVI	ATCGAT	1 cut(s)	1377
BsiHKAI	GWGCWC	1 cut(s)	563
BsiHKCI	CYCGRG	1 cut(s)	788
BsiSI	CCGG	5 cut(s)	115, 665, 1097, 1119, 1581
BsiWI	CGTACG	1 cut(s)	624
BslFI	GGGAC	1 cut(s)	1100
BslI	CCNNNNNNNGG	4 cut(s)	486, 1034, 1118, 1125
BsmFI	GGGAC	1 cut(s)	1100
BsmI	GAATGC	1 cut(s)	1273
BsnI	GGCC	8 cut(s)	292, 308, 328, 507, 902, 1014, 1580, 1609
BsoBI	CYCGRG	1 cut(s)	788
Bsp119I	TTCGAA	1 cut(s)	57
Bsp1286I	GDGCHC	2 cut(s)	563, 633
Bsp143I	GATC	5 cut(s)	298, 426, 495, 1074, 1180
Bsp19I	CCATGG	1 cut(s)	634
BspACI	CCGC	8 cut(s)	617, 903, 905, 911, 1051, 1358, 1397, 1590
BspANI	GGCC	8 cut(s)	292, 308, 328, 507, 902, 1014, 1580, 1609
BspCNI	CTCAG	1 cut(s)	1383
BspDI	ATCGAT	1 cut(s)	1377
BspFNI	CGCG	3 cut(s)	905, 1343, 1590
BspLI	GGNNCC	5 cut(s)	98, 293, 435, 1101, 1548
BspPI	GGATC	2 cut(s)	434, 1175
BspT104I	TTCGAA	1 cut(s)	57
BsrDI	GCAATG	1 cut(s)	468
BsrFI	RCCGGY	2 cut(s)	664, 1096
BsrI	ACTGG	4 cut(s)	45, 93, 183, 1329
BssAI	RCCGGY	2 cut(s)	664, 1096
BssECI	CCNNGG	7 cut(s)	115, 264, 634, 903, 1015, 1117, 1501
BssMI	GATC	5 cut(s)	298, 426, 495, 1074, 1180
BssT1I	CCWWGG	3 cut(s)	264, 634, 1501
Bst2UI	CCWGG	3 cut(s)	487, 1577, 1606
Bst4CI	ACNGT	6 cut(s)	134, 605, 1156, 1432, 1534, 1572
Bst6I	CTCTTC	5 cut(s)	275, 281, 885, 1340, 1410
BstAPI	GCANNNNNTGC	1 cut(s)	1601
BstBAI	YACGTR	3 cut(s)	733, 802, 1210
BstBI	TTCGAA	1 cut(s)	57
BstC8I	GCNNGC	1 cut(s)	1386
BstDEI	CTNAG	2 cut(s)	537, 1391
BstDSI	CCRYGG	2 cut(s)	634, 903
BstENI	CCTNNNNNAGG	1 cut(s)	484
BstF5I	GGATG	6 cut(s)	111, 476, 823, 1024, 1096, 1281
BstFNI	CGCG	3 cut(s)	905, 1343, 1590
BstHHI	GCGC	1 cut(s)	1343
BstKTI	GATC	5 cut(s)	301, 429, 498, 1077, 1183
BstMBI	GATC	5 cut(s)	298, 426, 495, 1074, 1180
BstMWI	GCNNNNNNNGC	5 cut(s)	742, 784, 908, 1394, 1601
BstNI	CCWGG	3 cut(s)	487, 1577, 1606
BstNSI	RCATGY	2 cut(s)	344, 1463
BstPAI	GACNNNNGTC	1 cut(s)	675
BstSCI	CCNGG	6 cut(s)	114, 485, 1117, 1575, 1580, 1604
BstUI	CGCG	3 cut(s)	905, 1343, 1590
BstV1I	GCAGC	4 cut(s)	64, 231, 234, 1427
BstV2I	GAAGAC	1 cut(s)	66
BstX2I	RGATCY	1 cut(s)	1180
BstXI	CCANNNNNNTGG	1 cut(s)	178
BstYI	RGATCY	1 cut(s)	1180
Bsu15I	ATCGAT	1 cut(s)	1377
BsuRI	GGCC	8 cut(s)	292, 308, 328, 507, 902, 1014, 1580, 1609
BsuTUI	ATCGAT	1 cut(s)	1377
BtgI	CCRYGG	2 cut(s)	634, 903
BtsCI	GGATG	6 cut(s)	111, 476, 823, 1024, 1096, 1281
BtsIMutI	CAGTG	2 cut(s)	52, 139
Cac8I	GCNNGC	1 cut(s)	1386
CfoI	GCGC	1 cut(s)	1343
Cfr10I	RCCGGY	2 cut(s)	664, 1096
Cfr13I	GGNCC	3 cut(s)	96, 291, 505
Cfr42I	CCGCGG	1 cut(s)	906
ClaI	ATCGAT	1 cut(s)	1377
Csp6I	GTAC	5 cut(s)	625, 706, 1207, 1261, 1630
CspAI	ACCGGT	1 cut(s)	1096
CviAII	CATG	6 cut(s)	125, 341, 635, 1145, 1161, 1460
CviQI	GTAC	5 cut(s)	625, 706, 1207, 1261, 1630
DdeI	CTNAG	2 cut(s)	537, 1391
DpnI	GATC	5 cut(s)	300, 428, 497, 1076, 1182
DpnII	GATC	5 cut(s)	298, 426, 495, 1074, 1180
Eam1104I	CTCTTC	5 cut(s)	275, 281, 885, 1340, 1410
EarI	CTCTTC	5 cut(s)	275, 281, 885, 1340, 1410
EciI	GGCGGA	3 cut(s)	606, 926, 1066
Ecl136II	GAGCTC	1 cut(s)	561
Eco130I	CCWWGG	3 cut(s)	264, 634, 1501
Eco24I	GRGCYC	2 cut(s)	563, 633
Eco47I	GGWCC	1 cut(s)	96
Eco53kI	GAGCTC	1 cut(s)	561
Eco88I	CYCGRG	1 cut(s)	788
EcoICRI	GAGCTC	1 cut(s)	561
EcoNI	CCTNNNNNAGG	1 cut(s)	484
EcoO109I	RGGNCCY	2 cut(s)	96, 291
EcoRII	CCWGG	3 cut(s)	485, 1575, 1604
EcoT14I	CCWWGG	3 cut(s)	264, 634, 1501
EcoT38I	GRGCYC	2 cut(s)	563, 633
ErhI	CCWWGG	3 cut(s)	264, 634, 1501
FaeI	CATG	6 cut(s)	128, 344, 638, 1148, 1164, 1463
FaqI	GGGAC	1 cut(s)	1100
FatI	CATG	6 cut(s)	124, 340, 634, 1144, 1160, 1459
FauI	CCCGC	2 cut(s)	898, 1390
FblI	GTMKAC	2 cut(s)	542, 669
Fnu4HI	GCNGC	5 cut(s)	78, 245, 248, 903, 1441
FokI	GGATG	6 cut(s)	98, 463, 830, 1011, 1103, 1288
FriOI	GRGCYC	2 cut(s)	563, 633
Fsp4HI	GCNGC	5 cut(s)	78, 245, 248, 903, 1441
FspBI	CTAG	2 cut(s)	296, 1317
GlaI	GCGC	1 cut(s)	1342
GluI	GCNGC	5 cut(s)	78, 245, 248, 903, 1441
HaeIII	GGCC	8 cut(s)	292, 308, 328, 507, 902, 1014, 1580, 1609
HapII	CCGG	5 cut(s)	115, 665, 1097, 1119, 1581
HhaI	GCGC	1 cut(s)	1343
Hin1II	CATG	6 cut(s)	128, 344, 638, 1148, 1164, 1463
Hin6I	GCGC	1 cut(s)	1341
HinP1I	GCGC	1 cut(s)	1341
HincII	GTYRAC	2 cut(s)	447, 543
HindII	GTYRAC	2 cut(s)	447, 543
HindIII	AAGCTT	1 cut(s)	1382
HinfI	GANTC	8 cut(s)	140, 197, 311, 409, 676, 981, 1054, 1511
HpaII	CCGG	5 cut(s)	115, 665, 1097, 1119, 1581
HphI	GGTGA	5 cut(s)	193, 281, 309, 823, 971
Hpy166II	GTNNAC	5 cut(s)	447, 543, 598, 670, 1555
Hpy188I	TCNGA	8 cut(s)	202, 755, 810, 986, 1010, 1062, 1392, 1520
Hpy188III	TCNNGA	9 cut(s)	14, 38, 84, 94, 194, 680, 1035, 1103, 1174
Hpy8I	GTNNAC	5 cut(s)	447, 543, 598, 670, 1555
Hpy99I	CGWCG	4 cut(s)	218, 221, 395, 547
HpyAV	CCTTC	6 cut(s)	198, 451, 460, 650, 892, 1444
HpyCH4III	ACNGT	6 cut(s)	134, 605, 1156, 1432, 1534, 1572
HpyCH4IV	ACGT	4 cut(s)	732, 749, 801, 1209
HpyCH4V	TGCA	7 cut(s)	128, 736, 1001, 1094, 1364, 1443, 1595
HpyF10VI	GCNNNNNNNGC	5 cut(s)	742, 784, 908, 1394, 1601
HpyF3I	CTNAG	2 cut(s)	537, 1391
HpySE526I	ACGT	4 cut(s)	732, 749, 801, 1209
Hsp92II	CATG	6 cut(s)	128, 344, 638, 1148, 1164, 1463
HspAI	GCGC	1 cut(s)	1341
KspI	CCGCGG	1 cut(s)	906
Kzo9I	GATC	5 cut(s)	298, 426, 495, 1074, 1180
LmnI	GCTCC	2 cut(s)	1021, 1235
Lsp1109I	GCAGC	4 cut(s)	64, 231, 234, 1427
LweI	GCATC	4 cut(s)	1033, 1081, 1266, 1591
MaeI	CTAG	2 cut(s)	296, 1317
MaeII	ACGT	4 cut(s)	732, 749, 801, 1209
MaeIII	GTNAC	3 cut(s)	1069, 1156, 1247
MalI	GATC	5 cut(s)	300, 428, 497, 1076, 1182
MboI	GATC	5 cut(s)	298, 426, 495, 1074, 1180
MflI	RGATCY	1 cut(s)	1180
MhlI	GDGCHC	2 cut(s)	563, 633
MluCI	AATT	6 cut(s)	369, 414, 760, 804, 1199, 1563
MlyI	GAGTC	1 cut(s)	685
MmeI	TCCRAC	3 cut(s)	795, 955, 1467
MseI	TTAA	1 cut(s)	1494
MslI	CAYNNNNRTG	1 cut(s)	603
MspA1I	CMGCKG	1 cut(s)	905
MspI	CCGG	5 cut(s)	115, 665, 1097, 1119, 1581
MspR9I	CCNGG	6 cut(s)	116, 487, 1119, 1577, 1582, 1606
Mva1269I	GAATGC	1 cut(s)	1273
MvaI	CCWGG	3 cut(s)	487, 1577, 1606
MvnI	CGCG	3 cut(s)	905, 1343, 1590
MwoI	GCNNNNNNNGC	5 cut(s)	742, 784, 908, 1394, 1601
NciI	CCSGG	3 cut(s)	116, 1119, 1582
NcoI	CCATGG	1 cut(s)	634
NdeII	GATC	5 cut(s)	298, 426, 495, 1074, 1180
NlaIII	CATG	6 cut(s)	128, 344, 638, 1148, 1164, 1463
NlaIV	GGNNCC	5 cut(s)	98, 293, 435, 1101, 1548
NmeAIII	GCCGAG	1 cut(s)	1040
NmuCI	GTSAC	1 cut(s)	1247
NspI	RCATGY	2 cut(s)	344, 1463
NspV	TTCGAA	1 cut(s)	57
OliI	CACNNNNGTG	1 cut(s)	603
PcsI	WCGNNNNNNNCGW	2 cut(s)	213, 399
PctI	GAATGC	1 cut(s)	1273
PfeI	GAWTC	7 cut(s)	140, 197, 311, 409, 981, 1054, 1511
Pfl23II	CGTACG	1 cut(s)	624
PinAI	ACCGGT	1 cut(s)	1096
PkrI	GCNGC	5 cut(s)	79, 246, 249, 904, 1442
PleI	GAGTC	1 cut(s)	684
PpsI	GAGTC	1 cut(s)	684
Ppu21I	YACGTR	3 cut(s)	733, 802, 1210
PpuMI	RGGWCCY	1 cut(s)	96
PshAI	GACNNNNGTC	1 cut(s)	675
Psp124BI	GAGCTC	1 cut(s)	563
Psp1406I	AACGTT	1 cut(s)	749
Psp5II	RGGWCCY	1 cut(s)	96
Psp6I	CCWGG	3 cut(s)	485, 1575, 1604
PspGI	CCWGG	3 cut(s)	485, 1575, 1604
PspLI	CGTACG	1 cut(s)	624
PspN4I	GGNNCC	5 cut(s)	98, 293, 435, 1101, 1548
PspPI	GGNCC	3 cut(s)	96, 291, 505
PspPPI	RGGWCCY	1 cut(s)	96
PsuI	RGATCY	1 cut(s)	1180
RsaI	GTAC	5 cut(s)	626, 707, 1208, 1262, 1631
RsaNI	GTAC	5 cut(s)	625, 706, 1207, 1261, 1630
RseI	CAYNNNNRTG	1 cut(s)	603
SacI	GAGCTC	1 cut(s)	563
SacII	CCGCGG	1 cut(s)	906
SalI	GTCGAC	1 cut(s)	541
SaqAI	TTAA	1 cut(s)	1494
SatI	GCNGC	5 cut(s)	78, 245, 248, 903, 1441
Sau3AI	GATC	5 cut(s)	298, 426, 495, 1074, 1180
Sau96I	GGNCC	3 cut(s)	96, 291, 505
SchI	GAGTC	1 cut(s)	685
ScrFI	CCNGG	6 cut(s)	116, 487, 1119, 1577, 1582, 1606
SduI	GDGCHC	2 cut(s)	563, 633
SfaNI	GCATC	4 cut(s)	1033, 1081, 1266, 1591
Sfr303I	CCGCGG	1 cut(s)	906
SfuI	TTCGAA	1 cut(s)	57
SgrBI	CCGCGG	1 cut(s)	906
SinI	GGWCC	1 cut(s)	96
SmiMI	CAYNNNNRTG	1 cut(s)	603
SmlI	CTYRAG	5 cut(s)	12, 36, 192, 673, 1280
SmoI	CTYRAG	5 cut(s)	12, 36, 192, 673, 1280
Sse9I	AATT	6 cut(s)	369, 414, 760, 804, 1199, 1563
SsiI	CCGC	8 cut(s)	617, 903, 905, 911, 1051, 1358, 1397, 1590
SspMI	CTAG	2 cut(s)	296, 1317
SstI	GAGCTC	1 cut(s)	563
StyD4I	CCNGG	6 cut(s)	114, 485, 1117, 1575, 1580, 1604
StyI	CCWWGG	3 cut(s)	264, 634, 1501
TaaI	ACNGT	6 cut(s)	134, 605, 1156, 1432, 1534, 1572
TaiI	ACGT	4 cut(s)	735, 752, 804, 1212
TaqI	TCGA	5 cut(s)	57, 85, 527, 542, 1377
TasI	AATT	6 cut(s)	369, 414, 760, 804, 1199, 1563
TauI	GCSGC	1 cut(s)	905
TfiI	GAWTC	7 cut(s)	140, 197, 311, 409, 981, 1054, 1511
Tru1I	TTAA	1 cut(s)	1494
Tru9I	TTAA	1 cut(s)	1494
TscAI	CASTG	2 cut(s)	52, 139
TseFI	GTSAC	1 cut(s)	1247
TseI	GCWGC	4 cut(s)	77, 244, 247, 1440
Tsp45I	GTSAC	1 cut(s)	1247
TspDTI	ATGAA	6 cut(s)	465, 479, 669, 731, 869, 1419
TspGWI	ACGGA	2 cut(s)	389, 612
TspRI	CASTG	2 cut(s)	52, 139
VpaK11BI	GGWCC	1 cut(s)	96
XagI	CCTNNNNNAGG	1 cut(s)	484
XapI	RAATTY	1 cut(s)	1199
XceI	RCATGY	2 cut(s)	344, 1463
XcmI	CCANNNNNNNNNTGG	1 cut(s)	843
XmiI	GTMKAC	2 cut(s)	542, 669
XspI	CTAG	2 cut(s)	296, 1317

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.