DEAD-box ATP-dependent RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G06480 AT3G06480 |
| fragaria_vesca | FvH4_4g21040 |
| malus_domestica | MD13G1145900.v1.1 MD16G1139800.v1.1 MD16G1139900.v1.1 |
| prunus_persica | Prupe.1G109600_v2.0.a1 |
| pyrus_communis | pycom13g12540 pycom16g12400 |
| rosa_chinensis | RchiOBHm_Chr2g0174651 RchiOBHm_Chr4g0426571 |
| rosa_laevigata | RLG00000007289 |
| rosa_multiflora | Rmu_co8268839.1_g000001 Rmu_sc0001821.1_g000009 Rmu_sc0007189.1_g000006 |
| rosa_roxburghii | Rroxscaffold_5G00368580 |
| rosa_rugosa | Rorug04G0213500 |
| rosa_samantha | Rh4AG268700 Rh4BG275000 Rh4CG289300 Rh4DG271800 |
| rosa_wichuraiana | Rw2G054030 Rw4G023310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 2301 |
| Acc16I | TGCGCA | 1 cut(s) | 225 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 353, 523 |
| AccII | CGCG | 5 cut(s) | 2310, 2622, 2655, 2688, 2721 |
| AccIII | TCCGGA | 1 cut(s) | 115 |
| AclWI | GGATC | 4 cut(s) | 41, 2098, 3287, 3300 |
| AcoI | YGGCCR | 3 cut(s) | 916, 1106, 1825 |
| AcsI | RAATTY | 2 cut(s) | 1673, 1890 |
| AcuI | CTGAAG | 2 cut(s) | 471, 810 |
| AcvI | CACGTG | 1 cut(s) | 1704 |
| AcyI | GRCGYC | 2 cut(s) | 789, 2298 |
| AdeI | CACNNNGTG | 1 cut(s) | 3453 |
| AfaI | GTAC | 8 cut(s) | 831, 1117, 1235, 1940, 2194, 2426, 2514, 2930 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 71, 353, 523, 638, 1217, 2077, 2157, 2546, 2798 |
| AflIII | ACRYGT | 1 cut(s) | 1230 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3141 |
| AjiI | CACGTC | 3 cut(s) | 2759, 2960, 2966 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1821, 1853 |
| AleI | CACNNNNGTG | 1 cut(s) | 95 |
| Alw21I | GWGCWC | 2 cut(s) | 679, 1723 |
| Alw26I | GTCTC | 6 cut(s) | 258, 796, 1425, 2425, 3342, 3431 |
| Alw44I | GTGCAC | 1 cut(s) | 675 |
| AlwI | GGATC | 4 cut(s) | 41, 2098, 3287, 3300 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 23, 938, 3311, 3430 |
| Ama87I | CYCGRG | 2 cut(s) | 2793, 3211 |
| Aor13HI | TCCGGA | 1 cut(s) | 115 |
| ApaI | GGGCCC | 1 cut(s) | 179 |
| ApaLI | GTGCAC | 1 cut(s) | 675 |
| ApoI | RAATTY | 2 cut(s) | 1673, 1890 |
| AseI | ATTAAT | 2 cut(s) | 77, 1818 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 2258, 2989, 3033 |
| AspLEI | GCGC | 4 cut(s) | 226, 949, 2094, 2564 |
| AsuC2I | CCSGG | 3 cut(s) | 41, 2398, 2407 |
| AsuHPI | GGTGA | 5 cut(s) | 1291, 1379, 2017, 2246, 2372 |
| AsuII | TTCGAA | 1 cut(s) | 3037 |
| AvaI | CYCGRG | 2 cut(s) | 2793, 3211 |
| AvaII | GGWCC | 8 cut(s) | 629, 1253, 1298, 1730, 2394, 2789, 2873, 3326 |
| BaeGI | GKGCMC | 4 cut(s) | 179, 679, 2279, 2505 |
| BalI | TGGCCA | 2 cut(s) | 918, 1827 |
| BamHI | GGATCC | 1 cut(s) | 3292 |
| BanII | GRGCYC | 2 cut(s) | 179, 3026 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1274, 1306 |
| BbrPI | CACGTG | 1 cut(s) | 1704 |
| BbsI | GAAGAC | 1 cut(s) | 2376 |
| Bbv12I | GWGCWC | 2 cut(s) | 679, 1723 |
| BbvCI | CCTCAGC | 1 cut(s) | 1734 |
| BccI | CCATC | 9 cut(s) | 77, 199, 418, 775, 960, 1168, 2735, 2768, 2792 |
| BceAI | ACGGC | 6 cut(s) | 1121, 1572, 2799, 3066, 3159, 3204 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1340, 1374 |
| BciVI | GTATCC | 3 cut(s) | 291, 1705, 1843 |
| BclI | TGATCA | 2 cut(s) | 2167, 3271 |
| BcnI | CCSGG | 3 cut(s) | 41, 2398, 2407 |
| BcoDI | GTCTC | 6 cut(s) | 258, 796, 1425, 2425, 3342, 3431 |
| BfaI | CTAG | 4 cut(s) | 966, 2480, 3207, 3243 |
| BfmI | CTRYAG | 3 cut(s) | 800, 3169, 3199 |
| BfoI | RGCGCY | 1 cut(s) | 2095 |
| BfuI | GTATCC | 3 cut(s) | 291, 1705, 1843 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 497 |
| Bme18I | GGWCC | 8 cut(s) | 629, 1253, 1298, 1730, 2394, 2789, 2873, 3326 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3141 |
| BmeT110I | CYCGRG | 2 cut(s) | 2793, 3211 |
| BmgBI | CACGTC | 3 cut(s) | 2759, 2960, 2966 |
| BmrI | ACTGGG | 5 cut(s) | 127, 459, 533, 825, 2424 |
| BmuI | ACTGGG | 5 cut(s) | 127, 459, 533, 825, 2424 |
| BpiI | GAAGAC | 1 cut(s) | 2376 |
| BpmI | CTGGAG | 1 cut(s) | 3452 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1734 |
| Bpu14I | TTCGAA | 1 cut(s) | 3037 |
| BpuEI | CTTGAG | 2 cut(s) | 2214, 3372 |
| BpuMI | CCSGG | 3 cut(s) | 41, 2398, 2407 |
| BsaAI | YACGTR | 2 cut(s) | 1704, 2180 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1178, 1453 |
| BsaHI | GRCGYC | 2 cut(s) | 789, 2298 |
| BsaI | GGTCTC | 1 cut(s) | 2425 |
| BsaWI | WCCGGW | 1 cut(s) | 115 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 3115, 3133, 3145, 3145, 3163, 3175 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 71, 353, 523, 638, 1217, 2077, 2157, 2546, 2798 |
| Bse118I | RCCGGY | 1 cut(s) | 145 |
| Bse3DI | GCAATG | 3 cut(s) | 999, 2023, 2571 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1178, 1453 |
| BseAI | TCCGGA | 1 cut(s) | 115 |
| BseJI | GATNNNNATC | 2 cut(s) | 1178, 1453 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 71, 353, 523, 638, 1217, 2077, 2157, 2546, 2798 |
| BseMI | GCAATG | 3 cut(s) | 999, 2023, 2571 |
| BseMII | CTCAG | 5 cut(s) | 269, 785, 1748, 2430, 3303 |
| BseRI | GAGGAG | 3 cut(s) | 1054, 1676, 3449 |
| BseSI | GKGCMC | 4 cut(s) | 179, 679, 2279, 2505 |
| BseYI | CCCAGC | 2 cut(s) | 492, 654 |
| BsgI | GTGCAG | 3 cut(s) | 1191, 1365, 1684 |
| Bsh1236I | CGCG | 5 cut(s) | 2310, 2622, 2655, 2688, 2721 |
| BsiHKAI | GWGCWC | 2 cut(s) | 679, 1723 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2793, 3211 |
| BsiSI | CCGG | 5 cut(s) | 41, 116, 146, 2397, 2406 |
| BslFI | GGGAC | 9 cut(s) | 832, 1175, 2054, 2615, 2648, 2681, 2714, 2970, 3331 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 71, 353, 523, 638, 1217, 2077, 2157, 2546, 2798 |
| BsmAI | GTCTC | 6 cut(s) | 258, 796, 1425, 2425, 3342, 3431 |
| BsmBI | CGTCTC | 1 cut(s) | 796 |
| BsmFI | GGGAC | 9 cut(s) | 832, 1175, 2054, 2615, 2648, 2681, 2714, 2970, 3331 |
| BsmI | GAATGC | 1 cut(s) | 226 |
| Bso31I | GGTCTC | 1 cut(s) | 2425 |
| BsoBI | CYCGRG | 2 cut(s) | 2793, 3211 |
| Bsp119I | TTCGAA | 1 cut(s) | 3037 |
| Bsp120I | GGGCCC | 1 cut(s) | 175 |
| Bsp1286I | GDGCHC | 6 cut(s) | 179, 679, 1723, 2279, 2505, 3026 |
| Bsp13I | TCCGGA | 1 cut(s) | 115 |
| Bsp1407I | TGTACA | 2 cut(s) | 1233, 1938 |
| BspCNI | CTCAG | 5 cut(s) | 268, 784, 1747, 2431, 3304 |
| BspEI | TCCGGA | 1 cut(s) | 115 |
| BspFNI | CGCG | 5 cut(s) | 2310, 2622, 2655, 2688, 2721 |
| BspHI | TCATGA | 1 cut(s) | 1389 |
| BspMAI | CTGCAG | 1 cut(s) | 804 |
| BspPI | GGATC | 4 cut(s) | 41, 2098, 3287, 3300 |
| BspQI | GCTCTTC | 1 cut(s) | 1500 |
| BspT104I | TTCGAA | 1 cut(s) | 3037 |
| BspTNI | GGTCTC | 1 cut(s) | 2425 |
| BsrDI | GCAATG | 3 cut(s) | 999, 2023, 2571 |
| BsrFI | RCCGGY | 1 cut(s) | 145 |
| BsrGI | TGTACA | 2 cut(s) | 1233, 1938 |
| BssAI | RCCGGY | 1 cut(s) | 145 |
| BssNI | GRCGYC | 2 cut(s) | 789, 2298 |
| BssT1I | CCWWGG | 1 cut(s) | 65 |
| Bst4CI | ACNGT | 9 cut(s) | 33, 962, 1238, 1584, 1615, 2055, 2912, 3034, 3113 |
| Bst6I | CTCTTC | 1 cut(s) | 1500 |
| BstACI | GRCGYC | 2 cut(s) | 789, 2298 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 232, 430, 454, 601 |
| BstAUI | TGTACA | 2 cut(s) | 1233, 1938 |
| BstBAI | YACGTR | 2 cut(s) | 1704, 2180 |
| BstBI | TTCGAA | 1 cut(s) | 3037 |
| BstDSI | CCRYGG | 4 cut(s) | 29, 2815, 2911, 3175 |
| BstFNI | CGCG | 5 cut(s) | 2310, 2622, 2655, 2688, 2721 |
| BstH2I | RGCGCY | 1 cut(s) | 2095 |
| BstHHI | GCGC | 4 cut(s) | 226, 949, 2094, 2564 |
| BstMAI | GTCTC | 6 cut(s) | 258, 796, 1425, 2425, 3342, 3431 |
| BstNSI | RCATGY | 3 cut(s) | 353, 1225, 1234 |
| BstSFI | CTRYAG | 3 cut(s) | 800, 3169, 3199 |
| BstSLI | GKGCMC | 4 cut(s) | 179, 679, 2279, 2505 |
| BstUI | CGCG | 5 cut(s) | 2310, 2622, 2655, 2688, 2721 |
| BstV2I | GAAGAC | 1 cut(s) | 2376 |
| BstX2I | RGATCY | 2 cut(s) | 2103, 3292 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 875 |
| BstYI | RGATCY | 2 cut(s) | 2103, 3292 |
| BsuI | GTATCC | 3 cut(s) | 291, 1705, 1843 |
| BtgI | CCRYGG | 4 cut(s) | 29, 2815, 2911, 3175 |
| BtrI | CACGTC | 3 cut(s) | 2759, 2960, 2966 |
| BtsIMutI | CAGTG | 4 cut(s) | 1189, 1589, 1620, 3408 |
| CaiI | CAGNNNCTG | 4 cut(s) | 23, 938, 3311, 3430 |
| CciI | TCATGA | 1 cut(s) | 1389 |
| CfoI | GCGC | 4 cut(s) | 226, 949, 2094, 2564 |
| Cfr10I | RCCGGY | 1 cut(s) | 145 |
| CseI | GACGC | 1 cut(s) | 778 |
| CsiI | ACCWGGT | 1 cut(s) | 1210 |
| Csp6I | GTAC | 8 cut(s) | 830, 1116, 1234, 1939, 2193, 2425, 2513, 2929 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 2734, 2767, 2769, 2802 |
| CviQI | GTAC | 8 cut(s) | 830, 1116, 1234, 1939, 2193, 2425, 2513, 2929 |
| DraIII | CACNNNGTG | 1 cut(s) | 3453 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3141 |
| EaeI | YGGCCR | 3 cut(s) | 916, 1106, 1825 |
| Eam1104I | CTCTTC | 1 cut(s) | 1500 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3141 |
| EarI | CTCTTC | 1 cut(s) | 1500 |
| EciI | GGCGGA | 2 cut(s) | 150, 1404 |
| Eco130I | CCWWGG | 1 cut(s) | 65 |
| Eco24I | GRGCYC | 2 cut(s) | 179, 3026 |
| Eco31I | GGTCTC | 1 cut(s) | 2425 |
| Eco32I | GATATC | 1 cut(s) | 1141 |
| Eco47I | GGWCC | 8 cut(s) | 629, 1253, 1298, 1730, 2394, 2789, 2873, 3326 |
| Eco57I | CTGAAG | 2 cut(s) | 471, 810 |
| Eco72I | CACGTG | 1 cut(s) | 1704 |
| Eco88I | CYCGRG | 2 cut(s) | 2793, 3211 |
| EcoO109I | RGGNCCY | 5 cut(s) | 175, 879, 1730, 2873, 3264 |
| EcoRV | GATATC | 1 cut(s) | 1141 |
| EcoT14I | CCWWGG | 1 cut(s) | 65 |
| EcoT22I | ATGCAT | 3 cut(s) | 1023, 1227, 3370 |
| EcoT38I | GRGCYC | 2 cut(s) | 179, 3026 |
| ErhI | CCWWGG | 1 cut(s) | 65 |
| Esp3I | CGTCTC | 1 cut(s) | 796 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1323, 1355, 1821, 1853 |
| FaqI | GGGAC | 9 cut(s) | 832, 1175, 2054, 2615, 2648, 2681, 2714, 2970, 3331 |
| FauI | CCCGC | 4 cut(s) | 186, 2303, 2813, 2853 |
| FauNDI | CATATG | 1 cut(s) | 426 |
| FbaI | TGATCA | 2 cut(s) | 2167, 3271 |
| FriOI | GRGCYC | 2 cut(s) | 179, 3026 |
| FspBI | CTAG | 4 cut(s) | 966, 2480, 3207, 3243 |
| FspI | TGCGCA | 1 cut(s) | 225 |
| GlaI | GCGC | 4 cut(s) | 225, 948, 2093, 2563 |
| GsaI | CCCAGC | 2 cut(s) | 496, 658 |
| GsuI | CTGGAG | 1 cut(s) | 3452 |
| HaeII | RGCGCY | 1 cut(s) | 2095 |
| HapII | CCGG | 5 cut(s) | 41, 116, 146, 2397, 2406 |
| HgaI | GACGC | 1 cut(s) | 778 |
| HhaI | GCGC | 4 cut(s) | 226, 949, 2094, 2564 |
| Hin1I | GRCGYC | 2 cut(s) | 789, 2298 |
| Hin6I | GCGC | 4 cut(s) | 224, 947, 2092, 2562 |
| HinP1I | GCGC | 4 cut(s) | 224, 947, 2092, 2562 |
| HincII | GTYRAC | 1 cut(s) | 2344 |
| HindII | GTYRAC | 1 cut(s) | 2344 |
| HpaI | GTTAAC | 1 cut(s) | 2344 |
| HpaII | CCGG | 5 cut(s) | 41, 116, 146, 2397, 2406 |
| HphI | GGTGA | 5 cut(s) | 1291, 1379, 2017, 2246, 2372 |
| Hpy166II | GTNNAC | 9 cut(s) | 677, 1256, 1941, 2344, 2380, 2427, 2756, 2963, 3356 |
| Hpy188III | TCNNGA | 9 cut(s) | 116, 257, 933, 1046, 1390, 2251, 2480, 2795, 3305 |
| Hpy8I | GTNNAC | 9 cut(s) | 677, 1256, 1941, 2344, 2380, 2427, 2756, 2963, 3356 |
| Hpy99I | CGWCG | 4 cut(s) | 1298, 2303, 3117, 3225 |
| HpyAV | CCTTC | 9 cut(s) | 64, 915, 1296, 1576, 1847, 2385, 2729, 2946, 3283 |
| HpyCH4III | ACNGT | 9 cut(s) | 33, 962, 1238, 1584, 1615, 2055, 2912, 3034, 3113 |
| HpyCH4IV | ACGT | 8 cut(s) | 1293, 1703, 2179, 2191, 2298, 2758, 2959, 2965 |
| HpySE526I | ACGT | 8 cut(s) | 1293, 1703, 2179, 2191, 2298, 2758, 2959, 2965 |
| Hsp92I | GRCGYC | 2 cut(s) | 789, 2298 |
| HspAI | GCGC | 4 cut(s) | 224, 947, 2092, 2562 |
| Kpn2I | TCCGGA | 1 cut(s) | 115 |
| KroI | GCCGGC | 1 cut(s) | 145 |
| KroNI | GCCGGC | 1 cut(s) | 147 |
| Ksp22I | TGATCA | 2 cut(s) | 2167, 3271 |
| KspAI | GTTAAC | 1 cut(s) | 2344 |
| LguI | GCTCTTC | 1 cut(s) | 1500 |
| MabI | ACCWGGT | 1 cut(s) | 1210 |
| MaeI | CTAG | 4 cut(s) | 966, 2480, 3207, 3243 |
| MaeII | ACGT | 8 cut(s) | 1293, 1703, 2179, 2191, 2298, 2758, 2959, 2965 |
| MaeIII | GTNAC | 6 cut(s) | 808, 1094, 1354, 1367, 3107, 3224 |
| MflI | RGATCY | 2 cut(s) | 2103, 3292 |
| MhlI | GDGCHC | 6 cut(s) | 179, 679, 1723, 2279, 2505, 3026 |
| MlsI | TGGCCA | 2 cut(s) | 918, 1827 |
| MluNI | TGGCCA | 2 cut(s) | 918, 1827 |
| MmeI | TCCRAC | 8 cut(s) | 1051, 1276, 1655, 2999, 3107, 3113, 3143, 3344 |
| Mox20I | TGGCCA | 2 cut(s) | 918, 1827 |
| Mph1103I | ATGCAT | 3 cut(s) | 1023, 1227, 3370 |
| MroI | TCCGGA | 1 cut(s) | 115 |
| MroNI | GCCGGC | 1 cut(s) | 145 |
| MroXI | GAANNNNTTC | 3 cut(s) | 2258, 2989, 3033 |
| MscI | TGGCCA | 2 cut(s) | 918, 1827 |
| MseI | TTAA | 7 cut(s) | 77, 1034, 1818, 1992, 2322, 2343, 3408 |
| MslI | CAYNNNNRTG | 2 cut(s) | 95, 1480 |
| Msp20I | TGGCCA | 2 cut(s) | 918, 1827 |
| MspA1I | CMGCKG | 2 cut(s) | 11, 2462 |
| MspI | CCGG | 5 cut(s) | 41, 116, 146, 2397, 2406 |
| Mva1269I | GAATGC | 1 cut(s) | 226 |
| MvnI | CGCG | 5 cut(s) | 2310, 2622, 2655, 2688, 2721 |
| NaeI | GCCGGC | 1 cut(s) | 147 |
| NciI | CCSGG | 3 cut(s) | 41, 2398, 2407 |
| NdeI | CATATG | 1 cut(s) | 426 |
| NgoMIV | GCCGGC | 1 cut(s) | 145 |
| NmuCI | GTSAC | 2 cut(s) | 808, 1367 |
| NsbI | TGCGCA | 1 cut(s) | 225 |
| NsiI | ATGCAT | 3 cut(s) | 1023, 1227, 3370 |
| NspI | RCATGY | 3 cut(s) | 353, 1225, 1234 |
| NspV | TTCGAA | 1 cut(s) | 3037 |
| OliI | CACNNNNGTG | 1 cut(s) | 95 |
| PaeI | GCATGC | 1 cut(s) | 1225 |
| PaeR7I | CTCGAG | 1 cut(s) | 2793 |
| PagI | TCATGA | 1 cut(s) | 1389 |
| PasI | CCCWGGG | 1 cut(s) | 637 |
| PciI | ACATGT | 1 cut(s) | 1230 |
| PciSI | GCTCTTC | 1 cut(s) | 1500 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 3112 |
| PctI | GAATGC | 1 cut(s) | 226 |
| PdiI | GCCGGC | 1 cut(s) | 147 |
| PdmI | GAANNNNTTC | 3 cut(s) | 2258, 2989, 3033 |
| PfeI | GAWTC | 9 cut(s) | 112, 214, 997, 1179, 1595, 2254, 2579, 2990, 3308 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 353, 523 |
| PmaCI | CACGTG | 1 cut(s) | 1704 |
| PmlI | CACGTG | 1 cut(s) | 1704 |
| Ppu21I | YACGTR | 2 cut(s) | 1704, 2180 |
| PpuMI | RGGWCCY | 2 cut(s) | 1730, 2873 |
| PscI | ACATGT | 1 cut(s) | 1230 |
| PshBI | ATTAAT | 2 cut(s) | 77, 1818 |
| Psp5II | RGGWCCY | 2 cut(s) | 1730, 2873 |
| PspCI | CACGTG | 1 cut(s) | 1704 |
| PspFI | CCCAGC | 2 cut(s) | 492, 654 |
| PspOMI | GGGCCC | 1 cut(s) | 175 |
| PspPPI | RGGWCCY | 2 cut(s) | 1730, 2873 |
| PstI | CTGCAG | 1 cut(s) | 804 |
| PstNI | CAGNNNCTG | 4 cut(s) | 23, 938, 3311, 3430 |
| PsuI | RGATCY | 2 cut(s) | 2103, 3292 |
| PvuII | CAGCTG | 1 cut(s) | 2462 |
| RsaI | GTAC | 8 cut(s) | 831, 1117, 1235, 1940, 2194, 2426, 2514, 2930 |
| RsaNI | GTAC | 8 cut(s) | 830, 1116, 1234, 1939, 2193, 2425, 2513, 2929 |
| RseI | CAYNNNNRTG | 2 cut(s) | 95, 1480 |
| SapI | GCTCTTC | 1 cut(s) | 1500 |
| SaqAI | TTAA | 7 cut(s) | 77, 1034, 1818, 1992, 2322, 2343, 3408 |
| SduI | GDGCHC | 6 cut(s) | 179, 679, 1723, 2279, 2505, 3026 |
| SexAI | ACCWGGT | 1 cut(s) | 1210 |
| SfcI | CTRYAG | 3 cut(s) | 800, 3169, 3199 |
| Sfr274I | CTCGAG | 1 cut(s) | 2793 |
| SfuI | TTCGAA | 1 cut(s) | 3037 |
| SinI | GGWCC | 8 cut(s) | 629, 1253, 1298, 1730, 2394, 2789, 2873, 3326 |
| SlaI | CTCGAG | 1 cut(s) | 2793 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 95, 1480 |
| SmlI | CTYRAG | 3 cut(s) | 2229, 2793, 3387 |
| SmoI | CTYRAG | 3 cut(s) | 2229, 2793, 3387 |
| SphI | GCATGC | 1 cut(s) | 1225 |
| SspI | AATATT | 4 cut(s) | 584, 1082, 2011, 3301 |
| SspMI | CTAG | 4 cut(s) | 966, 2480, 3207, 3243 |
| StyI | CCWWGG | 1 cut(s) | 65 |
| TaaI | ACNGT | 9 cut(s) | 33, 962, 1238, 1584, 1615, 2055, 2912, 3034, 3113 |
| TaiI | ACGT | 8 cut(s) | 1296, 1706, 2182, 2194, 2301, 2761, 2962, 2968 |
| TaqI | TCGA | 3 cut(s) | 230, 2794, 3037 |
| TatI | WGTACW | 3 cut(s) | 829, 1233, 1938 |
| TauI | GCSGC | 3 cut(s) | 172, 2207, 3102 |
| TfiI | GAWTC | 9 cut(s) | 112, 214, 997, 1179, 1595, 2254, 2579, 2990, 3308 |
| Tru1I | TTAA | 7 cut(s) | 77, 1034, 1818, 1992, 2322, 2343, 3408 |
| Tru9I | TTAA | 7 cut(s) | 77, 1034, 1818, 1992, 2322, 2343, 3408 |
| TscAI | CASTG | 4 cut(s) | 1189, 1589, 1620, 3408 |
| TseFI | GTSAC | 2 cut(s) | 808, 1367 |
| Tsp45I | GTSAC | 2 cut(s) | 808, 1367 |
| TspGWI | ACGGA | 1 cut(s) | 2252 |
| TspRI | CASTG | 4 cut(s) | 1189, 1589, 1620, 3408 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 353, 523 |
| VneI | GTGCAC | 1 cut(s) | 675 |
| VpaK11BI | GGWCC | 8 cut(s) | 629, 1253, 1298, 1730, 2394, 2789, 2873, 3326 |
| VspI | ATTAAT | 2 cut(s) | 77, 1818 |
| XapI | RAATTY | 2 cut(s) | 1673, 1890 |
| XbaI | TCTAGA | 1 cut(s) | 2479 |
| XceI | RCATGY | 3 cut(s) | 353, 1225, 1234 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 202, 1067, 2009, 3427 |
| XhoI | CTCGAG | 1 cut(s) | 2793 |
| XmnI | GAANNNNTTC | 3 cut(s) | 2258, 2989, 3033 |
| XspI | CTAG | 4 cut(s) | 966, 2480, 3207, 3243 |
| ZraI | GACGTC | 1 cut(s) | 2299 |
| Zsp2I | ATGCAT | 3 cut(s) | 1023, 1227, 3370 |