Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007189.1

Orthogroup ID

OG0008446

Physical Location & Seq

Genomic Coordinates Reverse (-)

22788 .. 29846

Gene Structure 7059 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007189.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1203 bp

atgcaacagccttcttcttttggccaccagcaacaatcaggaactgacttggtgcaccatcaattcggttctaggtttcaaaatcaaatggacccagcaatcattcatagccagcagcctaatatgcctcctattggtttaaggaggagtcatgaaaataatttccagggtagagttggaaatgaatattacttaaatggtaacaatgaagggccaacagctactcagcagcctaagcttgcaactatcccaatgacaatcgcaagaagtcagcaggagatgggaatcagtggtgtcccatttcaaaatgctacacctagtcagagcatgcataacatgtacagtcatgcaataggtggtccaccattctcaaacaatgctctggtgaagccttcatacgtaggaccaacaagtgttcctagcctctcaccagttcaagcttatcttcaacaacatgaagttactgcaacgggtggtaatgttcctgcaccgttcatgacatttgaagatactggatttccgccagagatattgagagacgtgcgatatctgctccggagatcgtcgaacttccagtgccactggagcatctccattggttgtacatgtccaggtccatcgggttgtcagagacccgaaccgtcgggacaaactgctcctcctcgccgggcacgtcgggtgctatcgtcgttctcctcctcgccgtggacgacgtcaatccgcgttagagctttctccaatgaccagtcgaaagaggtcgtcaagcttctggagaagcagtcaacgtgcaccgccgatgagctccaccatcaacctcgtcccaaatccaatcgattctggagcttcaaggtctggccatttgcacctgcaatttcacagttccggccggccgatcagacagcaaatagtgcgccggtgcctccgtcccttgtccttcagatccggtgcccagagcaatttctggaccaccgtcgtcgatctggcaacggcctccttagcggcttctcggccatcaccgccggctactccatcgtcgagcccaggcagccatccctgcccccatcagaagcagcaccgcaccaccgtgccaacgccaagtccaaccacaaatctggagatcaacgtcgacctcaaacacgaaagctcgaccttgacccgattccaaatccgattagacagcccgagacgccgacaccaccttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005773 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03040 ko05202 ko05205 map03040 map05202 map05205

Pfam Domains

Protein Families

DEAD Helicase_C WW

Protein Analysis

400

Amino Acids

44.26

Weight (kDa)

9.81

Isoelectric Point (pI)

71.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008446)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06480 AT3G06480
fragaria_vesca	FvH4_4g21040
malus_domestica	MD13G1145900.v1.1 MD16G1139800.v1.1 MD16G1139900.v1.1
prunus_persica	Prupe.1G109600_v2.0.a1
pyrus_communis	pycom13g12540 pycom16g12400
rosa_chinensis	RchiOBHm_Chr2g0174651 RchiOBHm_Chr4g0426571
rosa_laevigata	RLG00000007289
rosa_multiflora	Rmu_co8268839.1_g000001 Rmu_sc0001821.1_g000009 Rmu_sc0007189.1_g000006
rosa_roxburghii	Rroxscaffold_5G00368580
rosa_rugosa	Rorug04G0213500
rosa_samantha	Rh4AG268700 Rh4BG275000 Rh4CG289300 Rh4DG271800
rosa_wichuraiana	Rw2G054030 Rw4G023310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	874
AatII	GACGTC	1 cut(s)	716
Acc36I	ACCTGC	1 cut(s)	874
AccB1I	GGYRCC	2 cut(s)	916, 945
AccI	GTMKAC	1 cut(s)	1126
AccII	CGCG	1 cut(s)	723
AccIII	TCCGGA	1 cut(s)	555
AciI	CCGC	6 cut(s)	521, 721, 792, 999, 1017, 1076
AclWI	GGATC	1 cut(s)	934
AcoI	YGGCCR	5 cut(s)	22, 854, 884, 888, 1008
AcuI	CTGAAG	1 cut(s)	920
AcyI	GRCGYC	2 cut(s)	713, 1187
AfaI	GTAC	2 cut(s)	341, 604
AfiI	CCNNNNNNNGG	2 cut(s)	134, 705
AflIII	ACRYGT	2 cut(s)	336, 605
AgsI	TTSAA	6 cut(s)	80, 305, 437, 449, 506, 847
AjiI	CACGTC	2 cut(s)	541, 674
AjnI	CCWGG	3 cut(s)	165, 610, 1040
AleI	CACNNNNGTG	1 cut(s)	1083
AluBI	AGCT	8 cut(s)	221, 238, 440, 731, 766, 802, 843, 1144
AluI	AGCT	8 cut(s)	221, 238, 440, 731, 766, 802, 843, 1144
Alw21I	GWGCWC	3 cut(s)	57, 791, 804
Alw26I	GTCTC	3 cut(s)	531, 625, 1178
Alw44I	GTGCAC	2 cut(s)	53, 787
AlwI	GGATC	1 cut(s)	934
AlwNI	CAGNNNCTG	1 cut(s)	44
Ama87I	CYCGRG	1 cut(s)	1181
Aor13HI	TCCGGA	1 cut(s)	555
AoxI	GGCC	7 cut(s)	22, 212, 854, 884, 888, 988, 1008
ApaLI	GTGCAC	2 cut(s)	53, 787
ApeKI	GCWGC	4 cut(s)	115, 229, 1045, 1070
AspLEI	GCGC	1 cut(s)	913
AspS9I	GGNCC	6 cut(s)	91, 212, 359, 404, 614, 964
AsuC2I	CCSGG	1 cut(s)	668
AsuHPI	GGTGA	3 cut(s)	397, 420, 1006
AvaI	CYCGRG	1 cut(s)	1181
AvaII	GGWCC	5 cut(s)	91, 359, 404, 614, 964
BaeGI	GKGCMC	4 cut(s)	57, 673, 791, 950
BalI	TGGCCA	2 cut(s)	24, 856
BanI	GGYRCC	2 cut(s)	916, 945
BanII	GRGCYC	2 cut(s)	804, 1041
BarI	GAAGNNNNNNTAC	2 cut(s)	380, 412
Bbv12I	GWGCWC	3 cut(s)	57, 791, 804
BbvI	GCAGC	4 cut(s)	127, 241, 1057, 1082
BccI	CCATC	8 cut(s)	66, 274, 625, 816, 1019, 1037, 1057, 1069
BceAI	ACGGC	2 cut(s)	688, 1003
BciT130I	CCWGG	3 cut(s)	167, 612, 1042
BcnI	CCSGG	1 cut(s)	668
BcoDI	GTCTC	3 cut(s)	531, 625, 1178
BfaI	CTAG	3 cut(s)	72, 318, 420
BfuAI	ACCTGC	1 cut(s)	874
BisI	GCNGC	5 cut(s)	116, 230, 1000, 1046, 1071
BlsI	GCNGC	5 cut(s)	117, 231, 1001, 1047, 1072
Bme1390I	CCNGG	4 cut(s)	167, 612, 668, 1042
Bme18I	GGWCC	5 cut(s)	91, 359, 404, 614, 964
BmeT110I	CYCGRG	1 cut(s)	1181
BmgBI	CACGTC	2 cut(s)	541, 674
BmgT120I	GGNCC	6 cut(s)	91, 212, 359, 404, 614, 964
BmiI	GGNNCC	3 cut(s)	93, 918, 947
BmrFI	CCNGG	4 cut(s)	167, 612, 668, 1042
BmsI	GCATC	1 cut(s)	597
BoxI	GACNNNNGTC	1 cut(s)	969
BpmI	CTGGAG	4 cut(s)	604, 791, 859, 1134
Bpu10I	CCTNAGC	2 cut(s)	234, 995
BpuMI	CCSGG	1 cut(s)	668
Bsa29I	ATCGAT	1 cut(s)	832
BsaAI	YACGTR	1 cut(s)	400
BsaBI	GATNNNNATC	1 cut(s)	284
BsaHI	GRCGYC	2 cut(s)	713, 1187
BsaI	GGTCTC	1 cut(s)	625
BsaJI	CCNNGG	3 cut(s)	166, 704, 1040
BsaWI	WCCGGW	2 cut(s)	555, 942
BsaXI	ACNNNNNCTCC	4 cut(s)	643, 673, 764, 794
Bsc4I	CCNNNNNNNGG	2 cut(s)	134, 705
Bse118I	RCCGGY	3 cut(s)	886, 913, 1019
Bse1I	ACTGG	5 cut(s)	431, 517, 574, 587, 745
Bse8I	GATNNNNATC	1 cut(s)	284
BseAI	TCCGGA	1 cut(s)	555
BseBI	CCWGG	3 cut(s)	167, 612, 1042
BseCI	ATCGAT	1 cut(s)	832
BseDI	CCNNGG	3 cut(s)	166, 704, 1040
BseGI	GGATG	1 cut(s)	1049
BseJI	GATNNNNATC	1 cut(s)	284
BseLI	CCNNNNNNNGG	2 cut(s)	134, 705
BseMII	CTCAG	1 cut(s)	239
BseNI	ACTGG	5 cut(s)	431, 517, 574, 587, 745
BseRI	GAGGAG	5 cut(s)	160, 648, 651, 685, 688
BseSI	GKGCMC	4 cut(s)	57, 673, 791, 950
BseX3I	CGGCCG	2 cut(s)	884, 888
BseXI	GCAGC	4 cut(s)	127, 241, 1057, 1082
BseYI	CCCAGC	1 cut(s)	94
BsgI	GTGCAG	1 cut(s)	471
Bsh1236I	CGCG	1 cut(s)	723
Bsh1285I	CGRYCG	2 cut(s)	887, 891
BshFI	GGCC	7 cut(s)	24, 214, 856, 886, 890, 990, 1010
BshNI	GGYRCC	2 cut(s)	916, 945
BshVI	ATCGAT	1 cut(s)	832
BsiEI	CGRYCG	2 cut(s)	887, 891
BsiHKAI	GWGCWC	3 cut(s)	57, 791, 804
BsiHKCI	CYCGRG	1 cut(s)	1181
BsiSI	CCGG	7 cut(s)	556, 667, 883, 887, 914, 943, 1020
BslFI	GGGAC	4 cut(s)	281, 660, 804, 910
BslI	CCNNNNNNNGG	2 cut(s)	134, 705
BsmAI	GTCTC	3 cut(s)	531, 625, 1178
BsmBI	CGTCTC	2 cut(s)	531, 1178
BsmFI	GGGAC	4 cut(s)	281, 660, 804, 910
BsnI	GGCC	7 cut(s)	24, 214, 856, 886, 890, 990, 1010
Bso31I	GGTCTC	1 cut(s)	625
BsoBI	CYCGRG	1 cut(s)	1181
Bsp1286I	GDGCHC	6 cut(s)	57, 673, 791, 804, 950, 1041
Bsp13I	TCCGGA	1 cut(s)	555
Bsp1407I	TGTACA	2 cut(s)	339, 602
Bsp143I	GATC	5 cut(s)	560, 892, 939, 977, 1117
BspACI	CCGC	6 cut(s)	521, 721, 792, 999, 1017, 1076
BspANI	GGCC	7 cut(s)	24, 214, 856, 886, 890, 990, 1010
BspCNI	CTCAG	1 cut(s)	238
BspDI	ATCGAT	1 cut(s)	832
BspEI	TCCGGA	1 cut(s)	555
BspFNI	CGCG	1 cut(s)	723
BspHI	TCATGA	2 cut(s)	151, 495
BspLI	GGNNCC	3 cut(s)	93, 918, 947
BspMI	ACCTGC	1 cut(s)	874
BspPI	GGATC	1 cut(s)	934
BspT107I	GGYRCC	2 cut(s)	916, 945
BspTNI	GGTCTC	1 cut(s)	625
BsrFI	RCCGGY	3 cut(s)	886, 913, 1019
BsrGI	TGTACA	2 cut(s)	339, 602
BsrI	ACTGG	5 cut(s)	431, 517, 574, 587, 745
BssAI	RCCGGY	3 cut(s)	886, 913, 1019
BssECI	CCNNGG	3 cut(s)	166, 704, 1040
BssMI	GATC	5 cut(s)	560, 892, 939, 977, 1117
BssNI	GRCGYC	2 cut(s)	713, 1187
Bst2UI	CCWGG	3 cut(s)	167, 612, 1042
Bst4CI	ACNGT	6 cut(s)	344, 492, 642, 879, 971, 1085
BstACI	GRCGYC	2 cut(s)	713, 1187
BstAPI	GCANNNNNTGC	1 cut(s)	908
BstAUI	TGTACA	2 cut(s)	339, 602
BstBAI	YACGTR	1 cut(s)	400
BstC8I	GCNNGC	5 cut(s)	113, 240, 329, 888, 1021
BstDEI	CTNAG	3 cut(s)	225, 234, 995
BstDSI	CCRYGG	1 cut(s)	704
BstF5I	GGATG	1 cut(s)	1049
BstFNI	CGCG	1 cut(s)	723
BstHHI	GCGC	1 cut(s)	913
BstKTI	GATC	5 cut(s)	563, 895, 942, 980, 1120
BstMAI	GTCTC	3 cut(s)	531, 625, 1178
BstMBI	GATC	5 cut(s)	560, 892, 939, 977, 1117
BstMCI	CGRYCG	2 cut(s)	887, 891
BstNI	CCWGG	3 cut(s)	167, 612, 1042
BstNSI	RCATGY	3 cut(s)	331, 340, 609
BstPAI	GACNNNNGTC	1 cut(s)	969
BstSCI	CCNGG	4 cut(s)	165, 610, 666, 1040
BstSLI	GKGCMC	4 cut(s)	57, 673, 791, 950
BstSNI	TACGTA	1 cut(s)	400
BstUI	CGCG	1 cut(s)	723
BstV1I	GCAGC	4 cut(s)	127, 241, 1057, 1082
BstX2I	RGATCY	1 cut(s)	939
BstXI	CCANNNNNNTGG	1 cut(s)	1112
BstYI	RGATCY	1 cut(s)	939
BstZI	CGGCCG	2 cut(s)	884, 888
Bsu15I	ATCGAT	1 cut(s)	832
BsuRI	GGCC	7 cut(s)	24, 214, 856, 886, 890, 990, 1010
BsuTUI	ATCGAT	1 cut(s)	832
BtgI	CCRYGG	1 cut(s)	704
BtrI	CACGTC	2 cut(s)	541, 674
BtsCI	GGATG	1 cut(s)	1049
BtsIMutI	CAGTG	3 cut(s)	295, 580, 581
BveI	ACCTGC	1 cut(s)	874
Cac8I	GCNNGC	5 cut(s)	113, 240, 329, 888, 1021
CaiI	CAGNNNCTG	1 cut(s)	44
CciI	TCATGA	2 cut(s)	151, 495
CfoI	GCGC	1 cut(s)	913
Cfr10I	RCCGGY	3 cut(s)	886, 913, 1019
Cfr13I	GGNCC	6 cut(s)	91, 212, 359, 404, 614, 964
ClaI	ATCGAT	1 cut(s)	832
CseI	GACGC	1 cut(s)	1195
Csp6I	GTAC	2 cut(s)	340, 603
CviAII	CATG	7 cut(s)	152, 328, 337, 347, 455, 496, 606
CviQI	GTAC	2 cut(s)	340, 603
DdeI	CTNAG	3 cut(s)	225, 234, 995
DpnI	GATC	5 cut(s)	562, 894, 941, 979, 1119
DpnII	GATC	5 cut(s)	560, 892, 939, 977, 1117
EaeI	YGGCCR	5 cut(s)	22, 854, 884, 888, 1008
EagI	CGGCCG	2 cut(s)	884, 888
EciI	GGCGGA	1 cut(s)	510
Ecl136II	GAGCTC	1 cut(s)	802
EclXI	CGGCCG	2 cut(s)	884, 888
Eco105I	TACGTA	1 cut(s)	400
Eco24I	GRGCYC	2 cut(s)	804, 1041
Eco31I	GGTCTC	1 cut(s)	625
Eco32I	GATATC	1 cut(s)	548
Eco47I	GGWCC	5 cut(s)	91, 359, 404, 614, 964
Eco52I	CGGCCG	2 cut(s)	884, 888
Eco53kI	GAGCTC	1 cut(s)	802
Eco57I	CTGAAG	1 cut(s)	920
Eco88I	CYCGRG	1 cut(s)	1181
EcoICRI	GAGCTC	1 cut(s)	802
EcoRII	CCWGG	3 cut(s)	165, 610, 1040
EcoRV	GATATC	1 cut(s)	548
EcoT22I	ATGCAT	1 cut(s)	333
EcoT38I	GRGCYC	2 cut(s)	804, 1041
Esp3I	CGTCTC	2 cut(s)	531, 1178
FaeI	CATG	7 cut(s)	155, 331, 340, 350, 458, 499, 609
FalI	AAGNNNNNCTT	2 cut(s)	429, 461
FaqI	GGGAC	4 cut(s)	281, 660, 804, 910
FatI	CATG	7 cut(s)	151, 327, 336, 346, 454, 495, 605
FblI	GTMKAC	1 cut(s)	1126
Fnu4HI	GCNGC	5 cut(s)	116, 230, 1000, 1046, 1071
FokI	GGATG	1 cut(s)	1036
FriOI	GRGCYC	2 cut(s)	804, 1041
FseI	GGCCGGCC	1 cut(s)	890
Fsp4HI	GCNGC	5 cut(s)	116, 230, 1000, 1046, 1071
FspBI	CTAG	3 cut(s)	72, 318, 420
GlaI	GCGC	1 cut(s)	912
GluI	GCNGC	5 cut(s)	116, 230, 1000, 1046, 1071
GsaI	CCCAGC	1 cut(s)	98
GsuI	CTGGAG	4 cut(s)	604, 791, 859, 1134
HaeIII	GGCC	7 cut(s)	24, 214, 856, 886, 890, 990, 1010
HapII	CCGG	7 cut(s)	556, 667, 883, 887, 914, 943, 1020
HgaI	GACGC	1 cut(s)	1195
HhaI	GCGC	1 cut(s)	913
Hin1I	GRCGYC	2 cut(s)	713, 1187
Hin1II	CATG	7 cut(s)	155, 331, 340, 350, 458, 499, 609
Hin6I	GCGC	1 cut(s)	911
HinP1I	GCGC	1 cut(s)	911
HincII	GTYRAC	2 cut(s)	783, 1127
HindII	GTYRAC	2 cut(s)	783, 1127
HindIII	AAGCTT	3 cut(s)	236, 438, 764
HinfI	GANTC	4 cut(s)	148, 285, 834, 1159
HpaII	CCGG	7 cut(s)	556, 667, 883, 887, 914, 943, 1020
HphI	GGTGA	3 cut(s)	397, 420, 1006
Hpy166II	GTNNAC	6 cut(s)	55, 362, 708, 783, 789, 1127
Hpy188I	TCNGA	6 cut(s)	324, 630, 897, 939, 1066, 1170
Hpy188III	TCNNGA	9 cut(s)	39, 152, 496, 556, 645, 770, 838, 962, 1113
Hpy8I	GTNNAC	6 cut(s)	55, 362, 708, 783, 789, 1127
Hpy99I	CGWCG	9 cut(s)	568, 646, 678, 691, 715, 975, 978, 1037, 1128
HpyAV	CCTTC	4 cut(s)	21, 203, 402, 944
HpyCH4III	ACNGT	6 cut(s)	344, 492, 642, 879, 971, 1085
HpyCH4IV	ACGT	6 cut(s)	399, 540, 673, 713, 785, 1123
HpyF3I	CTNAG	3 cut(s)	225, 234, 995
HpySE526I	ACGT	6 cut(s)	399, 540, 673, 713, 785, 1123
Hsp92I	GRCGYC	2 cut(s)	713, 1187
Hsp92II	CATG	7 cut(s)	155, 331, 340, 350, 458, 499, 609
HspAI	GCGC	1 cut(s)	911
Kpn2I	TCCGGA	1 cut(s)	555
KroI	GCCGGC	2 cut(s)	886, 1019
KroNI	GCCGGC	2 cut(s)	888, 1021
Kzo9I	GATC	5 cut(s)	560, 892, 939, 977, 1117
LmnI	GCTCC	5 cut(s)	558, 585, 661, 807, 840
Lsp1109I	GCAGC	4 cut(s)	127, 241, 1057, 1082
LweI	GCATC	1 cut(s)	597
MaeI	CTAG	3 cut(s)	72, 318, 420
MaeII	ACGT	6 cut(s)	399, 540, 673, 713, 785, 1123
MaeIII	GTNAC	2 cut(s)	200, 460
MalI	GATC	5 cut(s)	562, 894, 941, 979, 1119
MboI	GATC	5 cut(s)	560, 892, 939, 977, 1117
MboII	GAAGA	3 cut(s)	6, 437, 518
MflI	RGATCY	1 cut(s)	939
MhlI	GDGCHC	6 cut(s)	57, 673, 791, 804, 950, 1041
MlsI	TGGCCA	2 cut(s)	24, 856
MluCI	AATT	4 cut(s)	62, 160, 870, 956
MluNI	TGGCCA	2 cut(s)	24, 856
MlyI	GAGTC	1 cut(s)	157
MmeI	TCCRAC	2 cut(s)	157, 1125
Mox20I	TGGCCA	2 cut(s)	24, 856
Mph1103I	ATGCAT	1 cut(s)	333
MroI	TCCGGA	1 cut(s)	555
MroNI	GCCGGC	2 cut(s)	886, 1019
MscI	TGGCCA	2 cut(s)	24, 856
MseI	TTAA	3 cut(s)	140, 194, 1201
MslI	CAYNNNNRTG	1 cut(s)	1083
Msp20I	TGGCCA	2 cut(s)	24, 856
MspI	CCGG	7 cut(s)	556, 667, 883, 887, 914, 943, 1020
MspR9I	CCNGG	4 cut(s)	167, 612, 668, 1042
MvaI	CCWGG	3 cut(s)	167, 612, 1042
MvnI	CGCG	1 cut(s)	723
NaeI	GCCGGC	2 cut(s)	888, 1021
NciI	CCSGG	1 cut(s)	668
NdeII	GATC	5 cut(s)	560, 892, 939, 977, 1117
NgoMIV	GCCGGC	2 cut(s)	886, 1019
NlaIII	CATG	7 cut(s)	155, 331, 340, 350, 458, 499, 609
NlaIV	GGNNCC	3 cut(s)	93, 918, 947
NmeAIII	GCCGAG	1 cut(s)	986
NsiI	ATGCAT	1 cut(s)	333
NspI	RCATGY	3 cut(s)	331, 340, 609
OliI	CACNNNNGTG	1 cut(s)	1083
PaeI	GCATGC	1 cut(s)	331
PagI	TCATGA	2 cut(s)	151, 495
PaqCI	CACCTGC	1 cut(s)	874
PciI	ACATGT	2 cut(s)	336, 605
PcsI	WCGNNNNNNNCGW	2 cut(s)	670, 707
PdiI	GCCGGC	2 cut(s)	888, 1021
PfeI	GAWTC	3 cut(s)	285, 834, 1159
PflFI	GACNNNGTC	1 cut(s)	712
PkrI	GCNGC	5 cut(s)	117, 231, 1001, 1047, 1072
PleI	GAGTC	1 cut(s)	156
PpsI	GAGTC	1 cut(s)	156
Ppu21I	YACGTR	1 cut(s)	400
PscI	ACATGT	2 cut(s)	336, 605
PshAI	GACNNNNGTC	1 cut(s)	969
Psp124BI	GAGCTC	1 cut(s)	804
Psp6I	CCWGG	3 cut(s)	165, 610, 1040
PspFI	CCCAGC	1 cut(s)	94
PspGI	CCWGG	3 cut(s)	165, 610, 1040
PspN4I	GGNNCC	3 cut(s)	93, 918, 947
PspPI	GGNCC	6 cut(s)	91, 212, 359, 404, 614, 964
PstNI	CAGNNNCTG	1 cut(s)	44
PsuI	RGATCY	1 cut(s)	939
PsyI	GACNNNGTC	1 cut(s)	712
RigI	GGCCGGCC	1 cut(s)	890
RsaI	GTAC	2 cut(s)	341, 604
RsaNI	GTAC	2 cut(s)	340, 603
RseI	CAYNNNNRTG	1 cut(s)	1083
SacI	GAGCTC	1 cut(s)	804
SalI	GTCGAC	1 cut(s)	1125
SaqAI	TTAA	3 cut(s)	140, 194, 1201
SatI	GCNGC	5 cut(s)	116, 230, 1000, 1046, 1071
Sau3AI	GATC	5 cut(s)	560, 892, 939, 977, 1117
Sau96I	GGNCC	6 cut(s)	91, 212, 359, 404, 614, 964
SchI	GAGTC	1 cut(s)	157
ScrFI	CCNGG	4 cut(s)	167, 612, 668, 1042
SduI	GDGCHC	6 cut(s)	57, 673, 791, 804, 950, 1041
SfaNI	GCATC	1 cut(s)	597
SgrAI	CRCCGGYG	1 cut(s)	913
SinI	GGWCC	5 cut(s)	91, 359, 404, 614, 964
SmiMI	CAYNNNNRTG	1 cut(s)	1083
SnaBI	TACGTA	1 cut(s)	400
SphI	GCATGC	1 cut(s)	331
Sse9I	AATT	4 cut(s)	62, 160, 870, 956
SsiI	CCGC	6 cut(s)	521, 721, 792, 999, 1017, 1076
SspI	AATATT	1 cut(s)	188
SspMI	CTAG	3 cut(s)	72, 318, 420
SstI	GAGCTC	1 cut(s)	804
StyD4I	CCNGG	4 cut(s)	165, 610, 666, 1040
TaaI	ACNGT	6 cut(s)	344, 492, 642, 879, 971, 1085
TaiI	ACGT	6 cut(s)	402, 543, 676, 716, 788, 1126
TaqI	TCGA	7 cut(s)	566, 749, 832, 976, 1035, 1126, 1146
TasI	AATT	4 cut(s)	62, 160, 870, 956
TatI	WGTACW	2 cut(s)	339, 602
TauI	GCSGC	1 cut(s)	1002
TfiI	GAWTC	3 cut(s)	285, 834, 1159
Tru1I	TTAA	3 cut(s)	140, 194, 1201
Tru9I	TTAA	3 cut(s)	140, 194, 1201
TscAI	CASTG	3 cut(s)	295, 581, 587
TseI	GCWGC	4 cut(s)	115, 229, 1045, 1070
TspDTI	ATGAA	7 cut(s)	95, 168, 198, 222, 384, 471, 484
TspGWI	ACGGA	1 cut(s)	912
TspRI	CASTG	3 cut(s)	295, 581, 587
Tth111I	GACNNNGTC	1 cut(s)	712
VneI	GTGCAC	2 cut(s)	53, 787
VpaK11BI	GGWCC	5 cut(s)	91, 359, 404, 614, 964
XceI	RCATGY	3 cut(s)	331, 340, 609
XcmI	CCANNNNNNNNNTGG	1 cut(s)	173
XmiI	GTMKAC	1 cut(s)	1126
XspI	CTAG	3 cut(s)	72, 318, 420
ZraI	GACGTC	1 cut(s)	714
Zsp2I	ATGCAT	1 cut(s)	333

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.