DEAD-box ATP-dependent RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G06480 AT3G06480 |
| fragaria_vesca | FvH4_4g21040 |
| malus_domestica | MD13G1145900.v1.1 MD16G1139800.v1.1 MD16G1139900.v1.1 |
| prunus_persica | Prupe.1G109600_v2.0.a1 |
| pyrus_communis | pycom13g12540 pycom16g12400 |
| rosa_chinensis | RchiOBHm_Chr2g0174651 RchiOBHm_Chr4g0426571 |
| rosa_laevigata | RLG00000007289 |
| rosa_multiflora | Rmu_co8268839.1_g000001 Rmu_sc0001821.1_g000009 Rmu_sc0007189.1_g000006 |
| rosa_roxburghii | Rroxscaffold_5G00368580 |
| rosa_rugosa | Rorug04G0213500 |
| rosa_samantha | Rh4AG268700 Rh4BG275000 Rh4CG289300 Rh4DG271800 |
| rosa_wichuraiana | Rw2G054030 Rw4G023310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1579 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 362, 532, 3296 |
| AccI | GTMKAC | 1 cut(s) | 3348 |
| AccII | CGCG | 2 cut(s) | 2940, 2946 |
| AccIII | TCCGGA | 1 cut(s) | 2271 |
| AclWI | GGATC | 6 cut(s) | 41, 1549, 2107, 2695, 3272, 3285 |
| AcoI | YGGCCR | 3 cut(s) | 409, 925, 1834 |
| AcsI | RAATTY | 3 cut(s) | 483, 1682, 1899 |
| AcuI | CTGAAG | 1 cut(s) | 819 |
| AcvI | CACGTG | 2 cut(s) | 1713, 2927 |
| AdeI | CACNNNGTG | 1 cut(s) | 3441 |
| AfaI | GTAC | 7 cut(s) | 840, 1244, 1949, 2203, 2523, 2909, 3403 |
| AflIII | ACRYGT | 1 cut(s) | 1239 |
| AjiI | CACGTC | 1 cut(s) | 2738 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1830, 1862 |
| AleI | CACNNNNGTG | 1 cut(s) | 95 |
| Alw21I | GWGCWC | 3 cut(s) | 347, 960, 1732 |
| Alw26I | GTCTC | 5 cut(s) | 1434, 2244, 2434, 3327, 3416 |
| Alw44I | GTGCAC | 1 cut(s) | 956 |
| AlwI | GGATC | 6 cut(s) | 41, 1549, 2107, 2695, 3272, 3285 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 23, 947, 3296, 3415 |
| Aor13HI | TCCGGA | 1 cut(s) | 2271 |
| ApaI | GGGCCC | 1 cut(s) | 30 |
| ApaLI | GTGCAC | 1 cut(s) | 956 |
| ApoI | RAATTY | 3 cut(s) | 483, 1682, 1899 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 1871, 1903, 2639, 2671, 3079, 3111 |
| AseI | ATTAAT | 1 cut(s) | 1827 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2968, 3012 |
| AsuC2I | CCSGG | 4 cut(s) | 174, 491, 826, 2371 |
| AsuHPI | GGTGA | 7 cut(s) | 1300, 1323, 2026, 2240, 2255, 2381, 3427 |
| AsuII | TTCGAA | 1 cut(s) | 3016 |
| AvaII | GGWCC | 7 cut(s) | 994, 1262, 1307, 1739, 2768, 2852, 3311 |
| AxyI | CCTNAGG | 2 cut(s) | 258, 3372 |
| BaeGI | GKGCMC | 3 cut(s) | 30, 960, 2514 |
| BalI | TGGCCA | 2 cut(s) | 927, 1836 |
| BamHI | GGATCC | 1 cut(s) | 3277 |
| BanII | GRGCYC | 6 cut(s) | 30, 347, 1732, 2125, 3005, 3304 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1283, 1315 |
| BauI | CACGAG | 1 cut(s) | 2674 |
| BbrPI | CACGTG | 2 cut(s) | 1713, 2927 |
| BbsI | GAAGAC | 2 cut(s) | 632, 2385 |
| Bbv12I | GWGCWC | 3 cut(s) | 347, 960, 1732 |
| BbvCI | CCTCAGC | 1 cut(s) | 1743 |
| BceAI | ACGGC | 8 cut(s) | 307, 424, 1581, 2778, 3045, 3087, 3150, 3189 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3328, 3362 |
| BciVI | GTATCC | 3 cut(s) | 294, 1714, 1852 |
| BclI | TGATCA | 2 cut(s) | 2176, 3256 |
| BcnI | CCSGG | 4 cut(s) | 174, 491, 826, 2371 |
| BcoDI | GTCTC | 5 cut(s) | 1434, 2244, 2434, 3327, 3416 |
| BfaI | CTAG | 7 cut(s) | 975, 1323, 1757, 2489, 2772, 3192, 3228 |
| BfmI | CTRYAG | 3 cut(s) | 611, 3160, 3184 |
| BfuAI | ACCTGC | 1 cut(s) | 1579 |
| BfuI | GTATCC | 3 cut(s) | 294, 1714, 1852 |
| BmcAI | AGTACT | 1 cut(s) | 3403 |
| Bme18I | GGWCC | 7 cut(s) | 994, 1262, 1307, 1739, 2768, 2852, 3311 |
| BmgBI | CACGTC | 1 cut(s) | 2738 |
| BmrI | ACTGGG | 5 cut(s) | 127, 542, 2415, 2433, 3433 |
| BmuI | ACTGGG | 5 cut(s) | 127, 542, 2415, 2433, 3433 |
| BpiI | GAAGAC | 2 cut(s) | 632, 2385 |
| BpmI | CTGGAG | 1 cut(s) | 3437 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1137, 1743 |
| Bpu14I | TTCGAA | 1 cut(s) | 3016 |
| BpuEI | CTTGAG | 1 cut(s) | 2223 |
| BpuMI | CCSGG | 4 cut(s) | 174, 491, 826, 2371 |
| BsaAI | YACGTR | 5 cut(s) | 1303, 1713, 2189, 2540, 2927 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1187 |
| BsaI | GGTCTC | 2 cut(s) | 2434, 3416 |
| BsaWI | WCCGGW | 2 cut(s) | 1538, 2271 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 3106, 3124, 3136, 3136, 3154, 3166 |
| Bse118I | RCCGGY | 1 cut(s) | 145 |
| Bse21I | CCTNAGG | 2 cut(s) | 258, 3372 |
| Bse3DI | GCAATG | 1 cut(s) | 2032 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1187 |
| BseAI | TCCGGA | 1 cut(s) | 2271 |
| BseGI | GGATG | 8 cut(s) | 268, 445, 469, 862, 2620, 2725, 2758, 2926 |
| BseJI | GATNNNNATC | 1 cut(s) | 1187 |
| BseMI | GCAATG | 1 cut(s) | 2032 |
| BseMII | CTCAG | 8 cut(s) | 272, 395, 794, 1142, 1622, 1757, 2439, 3386 |
| BseRI | GAGGAG | 3 cut(s) | 1063, 1685, 3434 |
| BseSI | GKGCMC | 3 cut(s) | 30, 960, 2514 |
| BseYI | CCCAGC | 3 cut(s) | 663, 997, 2414 |
| BsgI | GTGCAG | 4 cut(s) | 830, 1200, 1374, 1693 |
| Bsh1236I | CGCG | 2 cut(s) | 2940, 2946 |
| BsiHKAI | GWGCWC | 3 cut(s) | 347, 960, 1732 |
| BsiSI | CCGG | 7 cut(s) | 146, 174, 491, 825, 1539, 2272, 2370 |
| BslFI | GGGAC | 9 cut(s) | 841, 1184, 2063, 2269, 2660, 2693, 2850, 2949, 3316 |
| BsmAI | GTCTC | 5 cut(s) | 1434, 2244, 2434, 3327, 3416 |
| BsmFI | GGGAC | 9 cut(s) | 841, 1184, 2063, 2269, 2660, 2693, 2850, 2949, 3316 |
| BsmI | GAATGC | 1 cut(s) | 1878 |
| Bso31I | GGTCTC | 2 cut(s) | 2434, 3416 |
| Bsp119I | TTCGAA | 1 cut(s) | 3016 |
| Bsp120I | GGGCCC | 1 cut(s) | 26 |
| Bsp1286I | GDGCHC | 8 cut(s) | 30, 347, 960, 1732, 2125, 2514, 3005, 3304 |
| Bsp13I | TCCGGA | 1 cut(s) | 2271 |
| Bsp1407I | TGTACA | 2 cut(s) | 1242, 1947 |
| Bsp19I | CCATGG | 1 cut(s) | 65 |
| BspCNI | CTCAG | 8 cut(s) | 271, 394, 793, 1141, 1621, 1756, 2440, 3385 |
| BspEI | TCCGGA | 1 cut(s) | 2271 |
| BspFNI | CGCG | 2 cut(s) | 2940, 2946 |
| BspHI | TCATGA | 2 cut(s) | 1054, 1398 |
| BspMAI | CTGCAG | 1 cut(s) | 615 |
| BspMI | ACCTGC | 1 cut(s) | 1579 |
| BspPI | GGATC | 6 cut(s) | 41, 1549, 2107, 2695, 3272, 3285 |
| BspQI | GCTCTTC | 1 cut(s) | 1509 |
| BspT104I | TTCGAA | 1 cut(s) | 3016 |
| BspTNI | GGTCTC | 2 cut(s) | 2434, 3416 |
| BsrDI | GCAATG | 1 cut(s) | 2032 |
| BsrFI | RCCGGY | 1 cut(s) | 145 |
| BsrGI | TGTACA | 2 cut(s) | 1242, 1947 |
| BssAI | RCCGGY | 1 cut(s) | 145 |
| BssSI | CACGAG | 1 cut(s) | 2674 |
| BssT1I | CCWWGG | 1 cut(s) | 65 |
| Bst2BI | CACGAG | 1 cut(s) | 2674 |
| Bst4CI | ACNGT | 8 cut(s) | 971, 1247, 1395, 1593, 1624, 2064, 3013, 3215 |
| Bst6I | CTCTTC | 1 cut(s) | 1509 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 319, 439, 463, 610 |
| BstAUI | TGTACA | 2 cut(s) | 1242, 1947 |
| BstBAI | YACGTR | 5 cut(s) | 1303, 1713, 2189, 2540, 2927 |
| BstBI | TTCGAA | 1 cut(s) | 3016 |
| BstDSI | CCRYGG | 4 cut(s) | 65, 2317, 2794, 3166 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3312 |
| BstF5I | GGATG | 8 cut(s) | 268, 445, 469, 862, 2620, 2725, 2758, 2926 |
| BstFNI | CGCG | 2 cut(s) | 2940, 2946 |
| BstMAI | GTCTC | 5 cut(s) | 1434, 2244, 2434, 3327, 3416 |
| BstNSI | RCATGY | 3 cut(s) | 1030, 1234, 1243 |
| BstSFI | CTRYAG | 3 cut(s) | 611, 3160, 3184 |
| BstSLI | GKGCMC | 3 cut(s) | 30, 960, 2514 |
| BstSNI | TACGTA | 1 cut(s) | 1303 |
| BstUI | CGCG | 2 cut(s) | 2940, 2946 |
| BstV2I | GAAGAC | 2 cut(s) | 632, 2385 |
| BstX2I | RGATCY | 4 cut(s) | 1541, 2112, 2687, 3277 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 884 |
| BstYI | RGATCY | 4 cut(s) | 1541, 2112, 2687, 3277 |
| Bsu36I | CCTNAGG | 2 cut(s) | 258, 3372 |
| BsuI | GTATCC | 3 cut(s) | 294, 1714, 1852 |
| BtgI | CCRYGG | 4 cut(s) | 65, 2317, 2794, 3166 |
| BtrI | CACGTC | 1 cut(s) | 2738 |
| BtsCI | GGATG | 8 cut(s) | 268, 445, 469, 862, 2620, 2725, 2758, 2926 |
| BtsI | GCAGTG | 1 cut(s) | 53 |
| BtsIMutI | CAGTG | 5 cut(s) | 53, 1198, 1598, 1629, 3393 |
| BveI | ACCTGC | 1 cut(s) | 1579 |
| CaiI | CAGNNNCTG | 4 cut(s) | 23, 947, 3296, 3415 |
| CciI | TCATGA | 2 cut(s) | 1054, 1398 |
| Cfr10I | RCCGGY | 1 cut(s) | 145 |
| CseI | GACGC | 3 cut(s) | 2946, 2952, 3359 |
| Csp6I | GTAC | 7 cut(s) | 839, 1243, 1948, 2202, 2522, 2908, 3402 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 2290, 2325, 2713, 2746, 2748, 2781 |
| CviQI | GTAC | 7 cut(s) | 839, 1243, 1948, 2202, 2522, 2908, 3402 |
| DraIII | CACNNNGTG | 1 cut(s) | 3441 |
| EaeI | YGGCCR | 3 cut(s) | 409, 925, 1834 |
| Eam1104I | CTCTTC | 1 cut(s) | 1509 |
| EarI | CTCTTC | 1 cut(s) | 1509 |
| EciI | GGCGGA | 3 cut(s) | 150, 1413, 3294 |
| Ecl136II | GAGCTC | 2 cut(s) | 345, 1730 |
| Eco105I | TACGTA | 1 cut(s) | 1303 |
| Eco130I | CCWWGG | 1 cut(s) | 65 |
| Eco24I | GRGCYC | 6 cut(s) | 30, 347, 1732, 2125, 3005, 3304 |
| Eco31I | GGTCTC | 2 cut(s) | 2434, 3416 |
| Eco47I | GGWCC | 7 cut(s) | 994, 1262, 1307, 1739, 2768, 2852, 3311 |
| Eco53kI | GAGCTC | 2 cut(s) | 345, 1730 |
| Eco57I | CTGAAG | 1 cut(s) | 819 |
| Eco72I | CACGTG | 2 cut(s) | 1713, 2927 |
| Eco81I | CCTNAGG | 2 cut(s) | 258, 3372 |
| EcoICRI | GAGCTC | 2 cut(s) | 345, 1730 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3312 |
| EcoO109I | RGGNCCY | 4 cut(s) | 27, 1739, 2852, 3249 |
| EcoT14I | CCWWGG | 1 cut(s) | 65 |
| EcoT22I | ATGCAT | 1 cut(s) | 1236 |
| EcoT38I | GRGCYC | 6 cut(s) | 30, 347, 1732, 2125, 3005, 3304 |
| ErhI | CCWWGG | 1 cut(s) | 65 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1332, 1364, 1830, 1862 |
| FaqI | GGGAC | 9 cut(s) | 841, 1184, 2063, 2269, 2660, 2693, 2850, 2949, 3316 |
| FauNDI | CATATG | 2 cut(s) | 435, 3327 |
| FbaI | TGATCA | 2 cut(s) | 2176, 3256 |
| FblI | GTMKAC | 1 cut(s) | 3348 |
| FokI | GGATG | 8 cut(s) | 275, 432, 456, 849, 2627, 2732, 2765, 2933 |
| FriOI | GRGCYC | 6 cut(s) | 30, 347, 1732, 2125, 3005, 3304 |
| FspBI | CTAG | 7 cut(s) | 975, 1323, 1757, 2489, 2772, 3192, 3228 |
| GsaI | CCCAGC | 3 cut(s) | 667, 1001, 2418 |
| GsuI | CTGGAG | 1 cut(s) | 3437 |
| HapII | CCGG | 7 cut(s) | 146, 174, 491, 825, 1539, 2272, 2370 |
| HgaI | GACGC | 3 cut(s) | 2946, 2952, 3359 |
| HincII | GTYRAC | 2 cut(s) | 2353, 3349 |
| HindII | GTYRAC | 2 cut(s) | 2353, 3349 |
| HindIII | AAGCTT | 2 cut(s) | 1139, 1341 |
| HpaI | GTTAAC | 1 cut(s) | 2353 |
| HpaII | CCGG | 7 cut(s) | 146, 174, 491, 825, 1539, 2272, 2370 |
| HphI | GGTGA | 7 cut(s) | 1300, 1323, 2026, 2240, 2255, 2381, 3427 |
| Hpy166II | GTNNAC | 8 cut(s) | 958, 1265, 1915, 1950, 2353, 2389, 2735, 3349 |
| Hpy188I | TCNGA | 7 cut(s) | 1227, 1611, 2449, 3000, 3120, 3156, 3261 |
| Hpy8I | GTNNAC | 8 cut(s) | 958, 1265, 1915, 1950, 2353, 2389, 2735, 3349 |
| Hpy99I | CGWCG | 3 cut(s) | 3108, 3210, 3353 |
| HpyAV | CCTTC | 9 cut(s) | 64, 876, 924, 1106, 1305, 1585, 1856, 2925, 3268 |
| HpyCH4III | ACNGT | 8 cut(s) | 971, 1247, 1395, 1593, 1624, 2064, 3013, 3215 |
| HpyCH4IV | ACGT | 8 cut(s) | 1302, 1712, 2188, 2200, 2307, 2539, 2737, 2926 |
| HpySE526I | ACGT | 8 cut(s) | 1302, 1712, 2188, 2200, 2307, 2539, 2737, 2926 |
| Kpn2I | TCCGGA | 1 cut(s) | 2271 |
| KroI | GCCGGC | 1 cut(s) | 145 |
| KroNI | GCCGGC | 1 cut(s) | 147 |
| Ksp22I | TGATCA | 2 cut(s) | 2176, 3256 |
| KspAI | GTTAAC | 1 cut(s) | 2353 |
| LguI | GCTCTTC | 1 cut(s) | 1509 |
| MaeI | CTAG | 7 cut(s) | 975, 1323, 1757, 2489, 2772, 3192, 3228 |
| MaeII | ACGT | 8 cut(s) | 1302, 1712, 2188, 2200, 2307, 2539, 2737, 2926 |
| MaeIII | GTNAC | 5 cut(s) | 417, 1103, 1363, 2228, 3209 |
| MflI | RGATCY | 4 cut(s) | 1541, 2112, 2687, 3277 |
| MhlI | GDGCHC | 8 cut(s) | 30, 347, 960, 1732, 2125, 2514, 3005, 3304 |
| MlsI | TGGCCA | 2 cut(s) | 927, 1836 |
| MluNI | TGGCCA | 2 cut(s) | 927, 1836 |
| MlyI | GAGTC | 7 cut(s) | 562, 667, 1060, 1231, 2582, 3124, 3154 |
| MmeI | TCCRAC | 6 cut(s) | 1060, 1664, 2978, 3098, 3104, 3134 |
| Mox20I | TGGCCA | 2 cut(s) | 927, 1836 |
| Mph1103I | ATGCAT | 1 cut(s) | 1236 |
| MroI | TCCGGA | 1 cut(s) | 2271 |
| MroNI | GCCGGC | 1 cut(s) | 145 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2968, 3012 |
| MscI | TGGCCA | 2 cut(s) | 927, 1836 |
| MseI | TTAA | 7 cut(s) | 1043, 1097, 1827, 2001, 2261, 2352, 2477 |
| MslI | CAYNNNNRTG | 2 cut(s) | 95, 1489 |
| Msp20I | TGGCCA | 2 cut(s) | 927, 1836 |
| MspA1I | CMGCKG | 2 cut(s) | 11, 2471 |
| MspI | CCGG | 7 cut(s) | 146, 174, 491, 825, 1539, 2272, 2370 |
| Mva1269I | GAATGC | 1 cut(s) | 1878 |
| MvnI | CGCG | 2 cut(s) | 2940, 2946 |
| NaeI | GCCGGC | 1 cut(s) | 147 |
| NciI | CCSGG | 4 cut(s) | 174, 491, 826, 2371 |
| NcoI | CCATGG | 1 cut(s) | 65 |
| NdeI | CATATG | 2 cut(s) | 435, 3327 |
| NgoMIV | GCCGGC | 1 cut(s) | 145 |
| NmuCI | GTSAC | 2 cut(s) | 417, 2228 |
| NsiI | ATGCAT | 1 cut(s) | 1236 |
| NspI | RCATGY | 3 cut(s) | 1030, 1234, 1243 |
| NspV | TTCGAA | 1 cut(s) | 3016 |
| OliI | CACNNNNGTG | 1 cut(s) | 95 |
| PaeI | GCATGC | 1 cut(s) | 1234 |
| PagI | TCATGA | 2 cut(s) | 1054, 1398 |
| PasI | CCCWGGG | 1 cut(s) | 646 |
| PciI | ACATGT | 1 cut(s) | 1239 |
| PciSI | GCTCTTC | 1 cut(s) | 1509 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 236, 3103 |
| PctI | GAATGC | 1 cut(s) | 1878 |
| PdiI | GCCGGC | 1 cut(s) | 147 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2968, 3012 |
| PfeI | GAWTC | 7 cut(s) | 112, 214, 814, 1188, 2952, 2969, 3293 |
| PflFI | GACNNNGTC | 1 cut(s) | 2255 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 362, 532, 3296 |
| PleI | GAGTC | 7 cut(s) | 561, 667, 1059, 1230, 2582, 3123, 3153 |
| PmaCI | CACGTG | 2 cut(s) | 1713, 2927 |
| PmlI | CACGTG | 2 cut(s) | 1713, 2927 |
| PpsI | GAGTC | 7 cut(s) | 561, 667, 1059, 1230, 2582, 3123, 3153 |
| Ppu21I | YACGTR | 5 cut(s) | 1303, 1713, 2189, 2540, 2927 |
| PpuMI | RGGWCCY | 2 cut(s) | 1739, 2852 |
| PscI | ACATGT | 1 cut(s) | 1239 |
| PshBI | ATTAAT | 1 cut(s) | 1827 |
| Psp124BI | GAGCTC | 2 cut(s) | 347, 1732 |
| Psp5II | RGGWCCY | 2 cut(s) | 1739, 2852 |
| PspCI | CACGTG | 2 cut(s) | 1713, 2927 |
| PspFI | CCCAGC | 3 cut(s) | 663, 997, 2414 |
| PspOMI | GGGCCC | 1 cut(s) | 26 |
| PspPPI | RGGWCCY | 2 cut(s) | 1739, 2852 |
| PstI | CTGCAG | 1 cut(s) | 615 |
| PstNI | CAGNNNCTG | 4 cut(s) | 23, 947, 3296, 3415 |
| PsuI | RGATCY | 4 cut(s) | 1541, 2112, 2687, 3277 |
| PsyI | GACNNNGTC | 1 cut(s) | 2255 |
| PvuII | CAGCTG | 1 cut(s) | 2471 |
| RsaI | GTAC | 7 cut(s) | 840, 1244, 1949, 2203, 2523, 2909, 3403 |
| RsaNI | GTAC | 7 cut(s) | 839, 1243, 1948, 2202, 2522, 2908, 3402 |
| RseI | CAYNNNNRTG | 2 cut(s) | 95, 1489 |
| SacI | GAGCTC | 2 cut(s) | 347, 1732 |
| SalI | GTCGAC | 1 cut(s) | 3347 |
| SapI | GCTCTTC | 1 cut(s) | 1509 |
| SaqAI | TTAA | 7 cut(s) | 1043, 1097, 1827, 2001, 2261, 2352, 2477 |
| ScaI | AGTACT | 1 cut(s) | 3403 |
| SchI | GAGTC | 7 cut(s) | 562, 667, 1060, 1231, 2582, 3124, 3154 |
| SduI | GDGCHC | 8 cut(s) | 30, 347, 960, 1732, 2125, 2514, 3005, 3304 |
| SfcI | CTRYAG | 3 cut(s) | 611, 3160, 3184 |
| SfuI | TTCGAA | 1 cut(s) | 3016 |
| SinI | GGWCC | 7 cut(s) | 994, 1262, 1307, 1739, 2768, 2852, 3311 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 95, 1489 |
| SmlI | CTYRAG | 1 cut(s) | 2238 |
| SmoI | CTYRAG | 1 cut(s) | 2238 |
| SnaBI | TACGTA | 1 cut(s) | 1303 |
| SphI | GCATGC | 1 cut(s) | 1234 |
| SspI | AATATT | 3 cut(s) | 593, 1091, 2020 |
| SspMI | CTAG | 7 cut(s) | 975, 1323, 1757, 2489, 2772, 3192, 3228 |
| SstI | GAGCTC | 2 cut(s) | 347, 1732 |
| StyI | CCWWGG | 1 cut(s) | 65 |
| TaaI | ACNGT | 8 cut(s) | 971, 1247, 1395, 1593, 1624, 2064, 3013, 3215 |
| TaiI | ACGT | 8 cut(s) | 1305, 1715, 2191, 2203, 2310, 2542, 2740, 2929 |
| TaqI | TCGA | 5 cut(s) | 230, 1870, 2955, 3016, 3348 |
| TatI | WGTACW | 4 cut(s) | 838, 1242, 1947, 3401 |
| TauI | GCSGC | 4 cut(s) | 891, 2607, 2640, 3093 |
| TfiI | GAWTC | 7 cut(s) | 112, 214, 814, 1188, 2952, 2969, 3293 |
| Tru1I | TTAA | 7 cut(s) | 1043, 1097, 1827, 2001, 2261, 2352, 2477 |
| Tru9I | TTAA | 7 cut(s) | 1043, 1097, 1827, 2001, 2261, 2352, 2477 |
| TscAI | CASTG | 5 cut(s) | 60, 1198, 1598, 1629, 3393 |
| TseFI | GTSAC | 2 cut(s) | 417, 2228 |
| Tsp45I | GTSAC | 2 cut(s) | 417, 2228 |
| TspRI | CASTG | 5 cut(s) | 60, 1198, 1598, 1629, 3393 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2255 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 362, 532, 3296 |
| VneI | GTGCAC | 1 cut(s) | 956 |
| VpaK11BI | GGWCC | 7 cut(s) | 994, 1262, 1307, 1739, 2768, 2852, 3311 |
| VspI | ATTAAT | 1 cut(s) | 1827 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3312 |
| XapI | RAATTY | 3 cut(s) | 483, 1682, 1899 |
| XbaI | TCTAGA | 1 cut(s) | 2488 |
| XceI | RCATGY | 3 cut(s) | 1030, 1234, 1243 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 202, 1076, 2018 |
| XmiI | GTMKAC | 1 cut(s) | 3348 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2968, 3012 |
| XspI | CTAG | 7 cut(s) | 975, 1323, 1757, 2489, 2772, 3192, 3228 |
| ZrmI | AGTACT | 1 cut(s) | 3403 |
| Zsp2I | ATGCAT | 1 cut(s) | 1236 |