Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0008446

Physical Location & Seq

Genomic Coordinates Forward (+)

10757012 .. 10759852

Gene Structure 2841 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1139800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1602 bp

ATGGCAACAGAGGAGCCGGCTGGTCCACGGTATGCGCCAGATGATCCTACACTTCCTAATCCGTGGAAGGGTTTGATTGATGGTAGCACGGGTTTGTTATACTACTGGAATCCTGAAACTAACGTTACCCAGTATGAAAAACCGGCTTCTTTGCCTCCGCCCTTGCCATCAGGCCTGCCTCCTGCTACTTCCACACCAAAGCTGGCTGCAATTCCTGTTGCTCATTCAGTGCAACCGAAGGGAGTGATGCCTCAGGATGGACAGCAGATAACGCAAGCTCCACAACAGCACGGGTCGCAAGTGAGCCAGTTTTCTCAACAGCATGGACATCTAATGGCACAACAGATGAATCCGACATCATATGCTCAACAGCAGGGCTCACAAATGGCTCAACCTGGACATCAACAGAGTTCACTATTGGGACAGGCCATGCAACAGCATGGGCAAATGATGCAGCATCTGGGTCAGCAAATGCCCCAGCCGCAAGTGCATCAAGGGCAGCAAATGCCTCAGCAACTGGGACAACACACACCACAGGGTCATGCGTCACAAGGGCAGCAAAGGCTTCAACAACTGGGACAACACACACCACAGAGTCATGGGTCACAAATGCATCCGTTTGCACATCAGCAGATGCATTATAGGCCTTATCAGCAAAGCATTCCTCCCCAAGGGCAACAGAGTTCACAACCGCAAACTCTGCATAGTGCACAAGCGCAACCACTGGCAAATCAACAAGAATATAAAGCTGCATTCCCCCAGAGGGAGGAAGATGATTTTCAACAAAGAAATCAAATTGGTGTTTCTCCATCCCGGTTTCAACAAGCGGGAGCCTCATCTGTGCAGAATCTTCCTACTGGGACCAATCCAGTACAAATGCCACAGAGGTCTGTTCATCAAGGCCCAACCCAACAATTTGGCGGCCCCTTGGGAAACATGCAACATCCTTCCTCTTTTGGTCACTTGCAGCAACCAGGGGCTGATTTGGCTCACCATCAACATGGTTCTAGGTTCCAAAGTCAAATGGACCCAGCAATGATACACGGTCAGCAGTCAAATGTGCCTCCTGTTGGATTAAGAATGGGTCATGAAAATAATTTCCATGGTCGAGGTGGAAATGACTATTACTTCAATAGTAACAATGAAGGGACGACAGGTCCTCAGCAGCCCAAGCTTGCATCTATTCCGATTGCTAAAAGCCAGCAGGAGATGAGTGGTGGCCCTCCATTTCAAACTGCTACACCTGGTCATTCCATGCATAACGTGTACAGTCATGCAACAGGTGCTCCACCATTCCCAAATAACTCTTTGGTGAAGCCCCCTTATGTCAGACCTACAAGTCTTACTAGTCTCTCACCTGTTGAAGTTTATCGTCAACAACATGAAGTTACTGCATCGGGTGACAATGTACCTGCACCATTCATGACATTTGAAGACACTGGTTTTCCTCCAGAGATATTGAGAGAGGTGCGATATCTGCTCCGGAGGAGGAGCATATGTCGTACGCTGCACTGCTATTGGCACACTTACACATGCAACAACTATTCTGATTTTTGGAGGCTGCAAAATGAACTGTTGGAGCCTTTCTTGTGCATCTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003724 GO:0003824 GO:0004004 GO:0004386 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005773 GO:0006139 GO:0006725 GO:0006807 GO:0008026 GO:0008150 GO:0008152 GO:0008186 GO:0009987 GO:0010501 GO:0016070 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031974 GO:0031981 GO:0034641 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0070035 GO:0071704 GO:0090304 GO:0140098 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko03040 ko05202 ko05205 map03040 map05202 map05205

Pfam Domains

Protein Families

DEAD Helicase_C WW

Protein Analysis

534

Amino Acids

59.11

Weight (kDa)

7.03

Isoelectric Point (pI)

66.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WW	PF00397	18 - 48	9.2e-08	WW domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008446)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G06480 AT3G06480
fragaria_vesca	FvH4_4g21040
malus_domestica	MD13G1145900.v1.1 MD16G1139800.v1.1 MD16G1139900.v1.1
prunus_persica	Prupe.1G109600_v2.0.a1
pyrus_communis	pycom13g12540 pycom16g12400
rosa_chinensis	RchiOBHm_Chr2g0174651 RchiOBHm_Chr4g0426571
rosa_laevigata	RLG00000007289
rosa_multiflora	Rmu_co8268839.1_g000001 Rmu_sc0001821.1_g000009 Rmu_sc0007189.1_g000006
rosa_roxburghii	Rroxscaffold_5G00368580
rosa_rugosa	Rorug04G0213500
rosa_samantha	Rh4AG268700 Rh4BG275000 Rh4CG289300 Rh4DG271800
rosa_wichuraiana	Rw2G054030 Rw4G023310

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1338
Acc36I	ACCTGC	1 cut(s)	1420
AccIII	TCCGGA	1 cut(s)	1482
AciI	CCGC	5 cut(s)	158, 482, 692, 827, 921
AclI	AACGTT	1 cut(s)	123
AclWI	GGATC	1 cut(s)	38
AfaI	GTAC	4 cut(s)	873, 1268, 1410, 1504
AfiI	CCNNNNNNNGG	6 cut(s)	68, 257, 671, 763, 766, 1070
AflIII	ACRYGT	1 cut(s)	1263
AgsI	TTSAA	7 cut(s)	569, 782, 821, 1132, 1232, 1364, 1433
AhdI	GACNNNNNGTC	1 cut(s)	1155
AhlI	ACTAGT	1 cut(s)	1346
AjnI	CCWGG	3 cut(s)	394, 973, 1243
AluBI	AGCT	4 cut(s)	202, 278, 749, 1174
AluI	AGCT	4 cut(s)	202, 278, 749, 1174
Alw21I	GWGCWC	2 cut(s)	712, 1288
Alw26I	GTCTC	1 cut(s)	1355
Alw44I	GTGCAC	1 cut(s)	708
AlwI	GGATC	1 cut(s)	38
AlwNI	CAGNNNCTG	3 cut(s)	460, 517, 980
Aor13HI	TCCGGA	1 cut(s)	1482
AoxI	GGCC	6 cut(s)	172, 426, 644, 901, 922, 1219
ApaLI	GTGCAC	1 cut(s)	708
ApeKI	GCWGC	9 cut(s)	206, 454, 499, 556, 749, 967, 1165, 1507, 1561
AspLEI	GCGC	2 cut(s)	37, 718
AspS9I	GGNCC	7 cut(s)	23, 861, 902, 923, 1027, 1157, 1220
AsuC2I	CCSGG	1 cut(s)	814
AsuHPI	GGTGA	4 cut(s)	983, 1324, 1347, 1412
AvaII	GGWCC	4 cut(s)	23, 861, 1027, 1157
AxyI	CCTNAGG	1 cut(s)	252
BaeGI	GKGCMC	1 cut(s)	712
BanII	GRGCYC	1 cut(s)	380
BbsI	GAAGAC	1 cut(s)	1440
Bbv12I	GWGCWC	2 cut(s)	712, 1288
BbvCI	CCTCAGC	2 cut(s)	510, 1161
BbvI	GCAGC	9 cut(s)	193, 466, 511, 568, 736, 979, 1177, 1494, 1548
BccI	CCATC	5 cut(s)	74, 175, 251, 817, 1002
BciT130I	CCWGG	3 cut(s)	396, 975, 1245
BcnI	CCSGG	1 cut(s)	814
BcoDI	GTCTC	1 cut(s)	1355
BcuI	ACTAGT	1 cut(s)	1346
BfaI	CTAG	2 cut(s)	1008, 1347
BfuAI	ACCTGC	1 cut(s)	1420
Bme1390I	CCNGG	4 cut(s)	396, 814, 975, 1245
Bme18I	GGWCC	4 cut(s)	23, 861, 1027, 1157
BmeRI	GACNNNNNGTC	1 cut(s)	1155
BmgT120I	GGNCC	7 cut(s)	23, 861, 902, 923, 1027, 1157, 1220
BmiI	GGNNCC	7 cut(s)	15, 832, 862, 925, 1013, 1029, 1581
BmrFI	CCNGG	4 cut(s)	396, 814, 975, 1245
BmrI	ACTGGG	4 cut(s)	124, 527, 584, 867
BmsI	GCATC	8 cut(s)	237, 441, 466, 499, 622, 624, 1187, 1403
BmuI	ACTGGG	4 cut(s)	124, 527, 584, 867
BpiI	GAAGAC	1 cut(s)	1440
BpmI	CTGGAG	1 cut(s)	1434
Bpu10I	CCTNAGC	2 cut(s)	510, 1161
BpuMI	CCSGG	1 cut(s)	814
BsaJI	CCNNGG	6 cut(s)	26, 62, 670, 927, 974, 1102
BsaWI	WCCGGW	1 cut(s)	1482
BsaXI	ACNNNNNCTCC	6 cut(s)	262, 292, 1270, 1300, 1483, 1513
Bsc4I	CCNNNNNNNGG	6 cut(s)	68, 257, 671, 763, 766, 1070
Bse118I	RCCGGY	2 cut(s)	16, 142
Bse1I	ACTGG	9 cut(s)	110, 130, 307, 522, 579, 729, 862, 869, 1444
Bse21I	CCTNAGG	1 cut(s)	252
Bse3DI	GCAATG	1 cut(s)	1041
BseAI	TCCGGA	1 cut(s)	1482
BseBI	CCWGG	3 cut(s)	396, 975, 1245
BseDI	CCNNGG	6 cut(s)	26, 62, 670, 927, 974, 1102
BseGI	GGATG	4 cut(s)	262, 613, 809, 943
BseLI	CCNNNNNNNGG	6 cut(s)	68, 257, 671, 763, 766, 1070
BseMI	GCAATG	1 cut(s)	1041
BseMII	CTCAG	3 cut(s)	266, 524, 1175
BseNI	ACTGG	9 cut(s)	110, 130, 307, 522, 579, 729, 862, 869, 1444
BseRI	GAGGAG	3 cut(s)	26, 1501, 1504
BseSI	GKGCMC	1 cut(s)	712
BseXI	GCAGC	9 cut(s)	193, 466, 511, 568, 736, 979, 1177, 1494, 1548
BseYI	CCCAGC	2 cut(s)	477, 1030
BsgI	GTGCAG	3 cut(s)	863, 1398, 1493
BshFI	GGCC	6 cut(s)	174, 428, 646, 903, 924, 1221
BsiHKAI	GWGCWC	2 cut(s)	712, 1288
BsiSI	CCGG	4 cut(s)	17, 143, 814, 1483
BsiWI	CGTACG	1 cut(s)	1502
BslFI	GGGAC	5 cut(s)	435, 534, 591, 874, 1162
BslI	CCNNNNNNNGG	6 cut(s)	68, 257, 671, 763, 766, 1070
BsmAI	GTCTC	1 cut(s)	1355
BsmFI	GGGAC	5 cut(s)	435, 534, 591, 874, 1162
BsmI	GAATGC	2 cut(s)	660, 752
BsnI	GGCC	6 cut(s)	174, 428, 646, 903, 924, 1221
Bsp1286I	GDGCHC	3 cut(s)	380, 712, 1288
Bsp13I	TCCGGA	1 cut(s)	1482
Bsp1407I	TGTACA	1 cut(s)	1266
Bsp143I	GATC	1 cut(s)	43
Bsp19I	CCATGG	1 cut(s)	1102
BspACI	CCGC	5 cut(s)	158, 482, 692, 827, 921
BspANI	GGCC	6 cut(s)	174, 428, 646, 903, 924, 1221
BspCNI	CTCAG	3 cut(s)	265, 523, 1174
BspEI	TCCGGA	1 cut(s)	1482
BspHI	TCATGA	2 cut(s)	1087, 1422
BspLI	GGNNCC	7 cut(s)	15, 832, 862, 925, 1013, 1029, 1581
BspMI	ACCTGC	1 cut(s)	1420
BspPI	GGATC	1 cut(s)	38
BsrDI	GCAATG	1 cut(s)	1041
BsrFI	RCCGGY	2 cut(s)	16, 142
BsrGI	TGTACA	1 cut(s)	1266
BsrI	ACTGG	9 cut(s)	110, 130, 307, 522, 579, 729, 862, 869, 1444
BssAI	RCCGGY	2 cut(s)	16, 142
BssECI	CCNNGG	6 cut(s)	26, 62, 670, 927, 974, 1102
BssMI	GATC	1 cut(s)	43
BssT1I	CCWWGG	3 cut(s)	670, 927, 1102
Bst2UI	CCWGG	3 cut(s)	396, 975, 1245
Bst4CI	ACNGT	4 cut(s)	30, 1046, 1271, 1575
BstAPI	GCANNNNNTGC	4 cut(s)	451, 505, 700, 1283
BstAUI	TGTACA	1 cut(s)	1266
BstC8I	GCNNGC	6 cut(s)	18, 176, 204, 276, 1176, 1202
BstDEI	CTNAG	3 cut(s)	252, 510, 1161
BstDSI	CCRYGG	3 cut(s)	26, 62, 1102
BstENI	CCTNNNNNAGG	1 cut(s)	669
BstF5I	GGATG	4 cut(s)	262, 613, 809, 943
BstHHI	GCGC	2 cut(s)	37, 718
BstKTI	GATC	1 cut(s)	46
BstMAI	GTCTC	1 cut(s)	1355
BstMBI	GATC	1 cut(s)	43
BstNI	CCWGG	3 cut(s)	396, 975, 1245
BstNSI	RCATGY	2 cut(s)	940, 1536
BstSCI	CCNGG	4 cut(s)	394, 812, 973, 1243
BstSLI	GKGCMC	1 cut(s)	712
BstV1I	GCAGC	9 cut(s)	193, 466, 511, 568, 736, 979, 1177, 1494, 1548
BstV2I	GAAGAC	1 cut(s)	1440
BstXI	CCANNNNNNTGG	2 cut(s)	917, 1001
Bsu36I	CCTNAGG	1 cut(s)	252
BsuRI	GGCC	6 cut(s)	174, 428, 646, 903, 924, 1221
BtgI	CCRYGG	3 cut(s)	26, 62, 1102
BtsCI	GGATG	4 cut(s)	262, 613, 809, 943
BtsI	GCAGTG	1 cut(s)	1510
BtsIMutI	CAGTG	4 cut(s)	234, 722, 1437, 1510
BveI	ACCTGC	1 cut(s)	1420
Cac8I	GCNNGC	6 cut(s)	18, 176, 204, 276, 1176, 1202
CaiI	CAGNNNCTG	3 cut(s)	460, 517, 980
CciI	TCATGA	2 cut(s)	1087, 1422
CfoI	GCGC	2 cut(s)	37, 718
Cfr10I	RCCGGY	2 cut(s)	16, 142
Cfr13I	GGNCC	7 cut(s)	23, 861, 902, 923, 1027, 1157, 1220
CseI	GACGC	1 cut(s)	534
CsiI	ACCWGGT	1 cut(s)	1243
Csp6I	GTAC	4 cut(s)	872, 1267, 1409, 1503
CviQI	GTAC	4 cut(s)	872, 1267, 1409, 1503
DdeI	CTNAG	3 cut(s)	252, 510, 1161
DpnI	GATC	1 cut(s)	45
DpnII	GATC	1 cut(s)	43
DrdI	GACNNNNNNGTC	1 cut(s)	1338
DriI	GACNNNNNGTC	1 cut(s)	1155
DseDI	GACNNNNNNGTC	1 cut(s)	1338
Eam1105I	GACNNNNNGTC	1 cut(s)	1155
EciI	GGCGGA	1 cut(s)	147
Eco130I	CCWWGG	3 cut(s)	670, 927, 1102
Eco147I	AGGCCT	2 cut(s)	174, 646
Eco24I	GRGCYC	1 cut(s)	380
Eco32I	GATATC	1 cut(s)	1475
Eco47I	GGWCC	4 cut(s)	23, 861, 1027, 1157
Eco81I	CCTNAGG	1 cut(s)	252
EcoNI	CCTNNNNNAGG	1 cut(s)	669
EcoO109I	RGGNCCY	1 cut(s)	1157
EcoRII	CCWGG	3 cut(s)	394, 973, 1243
EcoRV	GATATC	1 cut(s)	1475
EcoT14I	CCWWGG	3 cut(s)	670, 927, 1102
EcoT22I	ATGCAT	3 cut(s)	615, 639, 1260
EcoT38I	GRGCYC	1 cut(s)	380
ErhI	CCWWGG	3 cut(s)	670, 927, 1102
FaqI	GGGAC	5 cut(s)	435, 534, 591, 874, 1162
FauI	CCCGC	1 cut(s)	820
FauNDI	CATATG	2 cut(s)	361, 1496
FokI	GGATG	4 cut(s)	269, 600, 796, 930
FriOI	GRGCYC	1 cut(s)	380
FspBI	CTAG	2 cut(s)	1008, 1347
GlaI	GCGC	2 cut(s)	36, 717
GsaI	CCCAGC	2 cut(s)	481, 1034
GsuI	CTGGAG	1 cut(s)	1434
HaeIII	GGCC	6 cut(s)	174, 428, 646, 903, 924, 1221
HapII	CCGG	4 cut(s)	17, 143, 814, 1483
HgaI	GACGC	1 cut(s)	534
HhaI	GCGC	2 cut(s)	37, 718
Hin6I	GCGC	2 cut(s)	35, 716
HinP1I	GCGC	2 cut(s)	35, 716
HincII	GTYRAC	1 cut(s)	1376
HindII	GTYRAC	1 cut(s)	1376
HindIII	AAGCTT	1 cut(s)	1172
HinfI	GANTC	4 cut(s)	109, 349, 595, 847
HpaII	CCGG	4 cut(s)	17, 143, 814, 1483
HphI	GGTGA	4 cut(s)	983, 1324, 1347, 1412
Hpy166II	GTNNAC	6 cut(s)	26, 413, 686, 710, 1267, 1376
Hpy188I	TCNGA	4 cut(s)	354, 1188, 1331, 1549
Hpy188III	TCNNGA	6 cut(s)	113, 254, 1088, 1423, 1451, 1483
Hpy8I	GTNNAC	6 cut(s)	26, 413, 686, 710, 1267, 1376
HpyAV	CCTTC	4 cut(s)	61, 232, 957, 1139
HpyCH4III	ACNGT	4 cut(s)	30, 1046, 1271, 1575
HpyCH4IV	ACGT	2 cut(s)	123, 1263
HpyF3I	CTNAG	3 cut(s)	252, 510, 1161
HpySE526I	ACGT	2 cut(s)	123, 1263
HspAI	GCGC	2 cut(s)	35, 716
Kpn2I	TCCGGA	1 cut(s)	1482
KroI	GCCGGC	1 cut(s)	16
KroNI	GCCGGC	1 cut(s)	18
Kzo9I	GATC	1 cut(s)	43
LmnI	GCTCC	7 cut(s)	13, 283, 830, 1291, 1485, 1491, 1579
Lsp1109I	GCAGC	9 cut(s)	193, 466, 511, 568, 736, 979, 1177, 1494, 1548
LweI	GCATC	8 cut(s)	237, 441, 466, 499, 622, 624, 1187, 1403
MabI	ACCWGGT	1 cut(s)	1243
MaeI	CTAG	2 cut(s)	1008, 1347
MaeII	ACGT	2 cut(s)	123, 1263
MaeIII	GTNAC	7 cut(s)	124, 546, 603, 959, 1136, 1387, 1400
MalI	GATC	1 cut(s)	45
MboI	GATC	1 cut(s)	43
MboII	GAAGA	4 cut(s)	782, 842, 1445, 1588
MhlI	GDGCHC	3 cut(s)	380, 712, 1288
MluCI	AATT	4 cut(s)	210, 795, 914, 1096
MlyI	GAGTC	1 cut(s)	604
MmeI	TCCRAC	3 cut(s)	377, 1051, 1557
Mph1103I	ATGCAT	3 cut(s)	615, 639, 1260
MroI	TCCGGA	1 cut(s)	1482
MroNI	GCCGGC	1 cut(s)	16
MseI	TTAA	1 cut(s)	1076
MslI	CAYNNNNRTG	1 cut(s)	999
MspI	CCGG	4 cut(s)	17, 143, 814, 1483
MspR9I	CCNGG	4 cut(s)	396, 814, 975, 1245
Mva1269I	GAATGC	2 cut(s)	660, 752
MvaI	CCWGG	3 cut(s)	396, 975, 1245
NaeI	GCCGGC	1 cut(s)	18
NciI	CCSGG	1 cut(s)	814
NcoI	CCATGG	1 cut(s)	1102
NdeI	CATATG	2 cut(s)	361, 1496
NdeII	GATC	1 cut(s)	43
NgoMIV	GCCGGC	1 cut(s)	16
NlaIV	GGNNCC	7 cut(s)	15, 832, 862, 925, 1013, 1029, 1581
NmuCI	GTSAC	4 cut(s)	546, 603, 959, 1400
NsiI	ATGCAT	3 cut(s)	615, 639, 1260
NspI	RCATGY	2 cut(s)	940, 1536
PagI	TCATGA	2 cut(s)	1087, 1422
PceI	AGGCCT	2 cut(s)	174, 646
PctI	GAATGC	2 cut(s)	660, 752
PdiI	GCCGGC	1 cut(s)	18
PfeI	GAWTC	3 cut(s)	109, 349, 847
Pfl23II	CGTACG	1 cut(s)	1502
PleI	GAGTC	1 cut(s)	603
PpsI	GAGTC	1 cut(s)	603
PpuMI	RGGWCCY	1 cut(s)	1157
Psp1406I	AACGTT	1 cut(s)	123
Psp5II	RGGWCCY	1 cut(s)	1157
Psp6I	CCWGG	3 cut(s)	394, 973, 1243
PspFI	CCCAGC	2 cut(s)	477, 1030
PspGI	CCWGG	3 cut(s)	394, 973, 1243
PspLI	CGTACG	1 cut(s)	1502
PspN4I	GGNNCC	7 cut(s)	15, 832, 862, 925, 1013, 1029, 1581
PspPI	GGNCC	7 cut(s)	23, 861, 902, 923, 1027, 1157, 1220
PspPPI	RGGWCCY	1 cut(s)	1157
PstNI	CAGNNNCTG	3 cut(s)	460, 517, 980
RsaI	GTAC	4 cut(s)	873, 1268, 1410, 1504
RsaNI	GTAC	4 cut(s)	872, 1267, 1409, 1503
RseI	CAYNNNNRTG	1 cut(s)	999
SaqAI	TTAA	1 cut(s)	1076
Sau3AI	GATC	1 cut(s)	43
Sau96I	GGNCC	7 cut(s)	23, 861, 902, 923, 1027, 1157, 1220
SchI	GAGTC	1 cut(s)	604
ScrFI	CCNGG	4 cut(s)	396, 814, 975, 1245
SduI	GDGCHC	3 cut(s)	380, 712, 1288
SexAI	ACCWGGT	1 cut(s)	1243
SfaNI	GCATC	8 cut(s)	237, 441, 466, 499, 622, 624, 1187, 1403
SinI	GGWCC	4 cut(s)	23, 861, 1027, 1157
SmiMI	CAYNNNNRTG	1 cut(s)	999
SpeI	ACTAGT	1 cut(s)	1346
Sse9I	AATT	4 cut(s)	210, 795, 914, 1096
SseBI	AGGCCT	2 cut(s)	174, 646
SsiI	CCGC	5 cut(s)	158, 482, 692, 827, 921
SspMI	CTAG	2 cut(s)	1008, 1347
StuI	AGGCCT	2 cut(s)	174, 646
StyD4I	CCNGG	4 cut(s)	394, 812, 973, 1243
StyI	CCWWGG	3 cut(s)	670, 927, 1102
TaaI	ACNGT	4 cut(s)	30, 1046, 1271, 1575
TaiI	ACGT	2 cut(s)	126, 1266
TaqI	TCGA	1 cut(s)	1108
TasI	AATT	4 cut(s)	210, 795, 914, 1096
TatI	WGTACW	2 cut(s)	871, 1266
TauI	GCSGC	2 cut(s)	484, 924
TfiI	GAWTC	3 cut(s)	109, 349, 847
Tru1I	TTAA	1 cut(s)	1076
Tru9I	TTAA	1 cut(s)	1076
TscAI	CASTG	4 cut(s)	234, 729, 1444, 1517
TseFI	GTSAC	4 cut(s)	546, 603, 959, 1400
TseI	GCWGC	9 cut(s)	206, 454, 499, 556, 749, 967, 1165, 1507, 1561
Tsp45I	GTSAC	4 cut(s)	546, 603, 959, 1400
TspDTI	ATGAA	8 cut(s)	150, 362, 884, 1104, 1158, 1398, 1411, 1584
TspGWI	ACGGA	2 cut(s)	51, 606
TspRI	CASTG	4 cut(s)	234, 729, 1444, 1517
VneI	GTGCAC	1 cut(s)	708
VpaK11BI	GGWCC	4 cut(s)	23, 861, 1027, 1157
XagI	CCTNNNNNAGG	1 cut(s)	669
XceI	RCATGY	2 cut(s)	940, 1536
XcmI	CCANNNNNNNNNTGG	2 cut(s)	199, 1109
XspI	CTAG	2 cut(s)	1008, 1347
Zsp2I	ATGCAT	3 cut(s)	615, 639, 1260

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.