DEAD-box ATP-dependent RNA helicase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G06480 AT3G06480 |
| fragaria_vesca | FvH4_4g21040 |
| malus_domestica | MD13G1145900.v1.1 MD16G1139800.v1.1 MD16G1139900.v1.1 |
| prunus_persica | Prupe.1G109600_v2.0.a1 |
| pyrus_communis | pycom13g12540 pycom16g12400 |
| rosa_chinensis | RchiOBHm_Chr2g0174651 RchiOBHm_Chr4g0426571 |
| rosa_laevigata | RLG00000007289 |
| rosa_multiflora | Rmu_co8268839.1_g000001 Rmu_sc0001821.1_g000009 Rmu_sc0007189.1_g000006 |
| rosa_roxburghii | Rroxscaffold_5G00368580 |
| rosa_rugosa | Rorug04G0213500 |
| rosa_samantha | Rh4AG268700 Rh4BG275000 Rh4CG289300 Rh4DG271800 |
| rosa_wichuraiana | Rw2G054030 Rw4G023310 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 2 cut(s) | 359, 529 |
| AccI | GTMKAC | 1 cut(s) | 3270 |
| AccII | CGCG | 3 cut(s) | 2854, 2868, 2874 |
| AccIII | TCCGGA | 1 cut(s) | 2199 |
| AclWI | GGATC | 6 cut(s) | 41, 1477, 2035, 2623, 3194, 3207 |
| AcoI | YGGCCR | 3 cut(s) | 406, 922, 1762 |
| AcsI | RAATTY | 3 cut(s) | 480, 1610, 1827 |
| AcuI | CTGAAG | 1 cut(s) | 816 |
| AcvI | CACGTG | 1 cut(s) | 1641 |
| AdeI | CACNNNGTG | 1 cut(s) | 3363 |
| AfaI | GTAC | 6 cut(s) | 837, 1241, 1877, 2131, 2451, 2837 |
| AflIII | ACRYGT | 1 cut(s) | 1236 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 3066 |
| AjiI | CACGTC | 1 cut(s) | 2666 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1758, 1790 |
| AleI | CACNNNNGTG | 1 cut(s) | 95 |
| Alw21I | GWGCWC | 3 cut(s) | 344, 957, 1660 |
| Alw26I | GTCTC | 4 cut(s) | 2172, 2362, 3249, 3338 |
| Alw44I | GTGCAC | 1 cut(s) | 953 |
| AlwI | GGATC | 6 cut(s) | 41, 1477, 2035, 2623, 3194, 3207 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 23, 944, 3218, 3337 |
| Aor13HI | TCCGGA | 1 cut(s) | 2199 |
| ApaI | GGGCCC | 1 cut(s) | 30 |
| ApaLI | GTGCAC | 1 cut(s) | 953 |
| ApoI | RAATTY | 3 cut(s) | 480, 1610, 1827 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 1799, 1831, 2567, 2599, 3013, 3045 |
| AseI | ATTAAT | 1 cut(s) | 1755 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2896, 2940 |
| AspLEI | GCGC | 2 cut(s) | 499, 2854 |
| AsuC2I | CCSGG | 4 cut(s) | 174, 488, 823, 2299 |
| AsuHPI | GGTGA | 6 cut(s) | 1297, 1320, 1954, 2168, 2183, 3349 |
| AsuII | TTCGAA | 1 cut(s) | 2944 |
| AvaII | GGWCC | 7 cut(s) | 991, 1259, 1304, 1667, 2696, 2780, 3233 |
| AxyI | CCTNAGG | 2 cut(s) | 255, 3294 |
| BaeGI | GKGCMC | 4 cut(s) | 30, 797, 957, 2442 |
| BalI | TGGCCA | 2 cut(s) | 924, 1764 |
| BamHI | GGATCC | 1 cut(s) | 3199 |
| BanII | GRGCYC | 5 cut(s) | 30, 344, 1660, 2053, 2933 |
| BauI | CACGAG | 1 cut(s) | 2602 |
| BbrPI | CACGTG | 1 cut(s) | 1641 |
| BbsI | GAAGAC | 2 cut(s) | 629, 2313 |
| Bbv12I | GWGCWC | 3 cut(s) | 344, 957, 1660 |
| BbvCI | CCTCAGC | 1 cut(s) | 1671 |
| BccI | CCATC | 9 cut(s) | 77, 199, 781, 966, 1174, 2537, 2642, 2675, 2699 |
| BceAI | ACGGC | 8 cut(s) | 304, 421, 1509, 2706, 2973, 3021, 3072, 3111 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3250, 3284 |
| BciVI | GTATCC | 3 cut(s) | 291, 1642, 1780 |
| BclI | TGATCA | 2 cut(s) | 2104, 3178 |
| BcnI | CCSGG | 4 cut(s) | 174, 488, 823, 2299 |
| BcoDI | GTCTC | 4 cut(s) | 2172, 2362, 3249, 3338 |
| BfaI | CTAG | 7 cut(s) | 972, 1218, 1320, 2417, 2700, 3114, 3150 |
| BfmI | CTRYAG | 3 cut(s) | 608, 3082, 3106 |
| BfuI | GTATCC | 3 cut(s) | 291, 1642, 1780 |
| Bme18I | GGWCC | 7 cut(s) | 991, 1259, 1304, 1667, 2696, 2780, 3233 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 3066 |
| BmgBI | CACGTC | 1 cut(s) | 2666 |
| BmrI | ACTGGG | 5 cut(s) | 127, 539, 2343, 2361, 3355 |
| BmuI | ACTGGG | 5 cut(s) | 127, 539, 2343, 2361, 3355 |
| BpiI | GAAGAC | 2 cut(s) | 629, 2313 |
| BpmI | CTGGAG | 1 cut(s) | 3359 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1134, 1671 |
| Bpu14I | TTCGAA | 1 cut(s) | 2944 |
| BpuEI | CTTGAG | 1 cut(s) | 2151 |
| BpuMI | CCSGG | 4 cut(s) | 174, 488, 823, 2299 |
| BsaAI | YACGTR | 3 cut(s) | 1641, 2117, 2468 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1184 |
| BsaI | GGTCTC | 2 cut(s) | 2362, 3338 |
| BsaWI | WCCGGW | 2 cut(s) | 1466, 2199 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 162, 192, 3040, 3058, 3070, 3088 |
| Bse118I | RCCGGY | 1 cut(s) | 145 |
| Bse21I | CCTNAGG | 2 cut(s) | 255, 3294 |
| Bse3DI | GCAATG | 1 cut(s) | 1960 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1184 |
| BseAI | TCCGGA | 1 cut(s) | 2199 |
| BseGI | GGATG | 8 cut(s) | 442, 466, 516, 859, 2548, 2653, 2686, 2854 |
| BseJI | GATNNNNATC | 1 cut(s) | 1184 |
| BseMI | GCAATG | 1 cut(s) | 1960 |
| BseMII | CTCAG | 9 cut(s) | 269, 392, 791, 1139, 1550, 1685, 2367, 3210, 3308 |
| BseRI | GAGGAG | 3 cut(s) | 1060, 1613, 3356 |
| BseSI | GKGCMC | 4 cut(s) | 30, 797, 957, 2442 |
| BseYI | CCCAGC | 3 cut(s) | 660, 994, 2342 |
| BsgI | GTGCAG | 3 cut(s) | 827, 1197, 1621 |
| Bsh1236I | CGCG | 3 cut(s) | 2854, 2868, 2874 |
| BsiHKAI | GWGCWC | 3 cut(s) | 344, 957, 1660 |
| BsiSI | CCGG | 7 cut(s) | 146, 174, 488, 822, 1467, 2200, 2298 |
| BsmAI | GTCTC | 4 cut(s) | 2172, 2362, 3249, 3338 |
| BsmI | GAATGC | 1 cut(s) | 1806 |
| Bso31I | GGTCTC | 2 cut(s) | 2362, 3338 |
| Bsp119I | TTCGAA | 1 cut(s) | 2944 |
| Bsp120I | GGGCCC | 1 cut(s) | 26 |
| Bsp1286I | GDGCHC | 8 cut(s) | 30, 344, 797, 957, 1660, 2053, 2442, 2933 |
| Bsp13I | TCCGGA | 1 cut(s) | 2199 |
| Bsp1407I | TGTACA | 2 cut(s) | 1239, 1875 |
| Bsp19I | CCATGG | 1 cut(s) | 65 |
| BspCNI | CTCAG | 9 cut(s) | 268, 391, 790, 1138, 1549, 1684, 2368, 3211, 3307 |
| BspEI | TCCGGA | 1 cut(s) | 2199 |
| BspFNI | CGCG | 3 cut(s) | 2854, 2868, 2874 |
| BspHI | TCATGA | 1 cut(s) | 1051 |
| BspMAI | CTGCAG | 1 cut(s) | 612 |
| BspPI | GGATC | 6 cut(s) | 41, 1477, 2035, 2623, 3194, 3207 |
| BspQI | GCTCTTC | 1 cut(s) | 1437 |
| BspT104I | TTCGAA | 1 cut(s) | 2944 |
| BspTNI | GGTCTC | 2 cut(s) | 2362, 3338 |
| BsrDI | GCAATG | 1 cut(s) | 1960 |
| BsrFI | RCCGGY | 1 cut(s) | 145 |
| BsrGI | TGTACA | 2 cut(s) | 1239, 1875 |
| BssAI | RCCGGY | 1 cut(s) | 145 |
| BssSI | CACGAG | 1 cut(s) | 2602 |
| BssT1I | CCWWGG | 1 cut(s) | 65 |
| Bst2BI | CACGAG | 1 cut(s) | 2602 |
| Bst4CI | ACNGT | 6 cut(s) | 1244, 1521, 1552, 1992, 2941, 3137 |
| Bst6I | CTCTTC | 1 cut(s) | 1437 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 316, 436, 460, 607 |
| BstAUI | TGTACA | 2 cut(s) | 1239, 1875 |
| BstBAI | YACGTR | 3 cut(s) | 1641, 2117, 2468 |
| BstBI | TTCGAA | 1 cut(s) | 2944 |
| BstDSI | CCRYGG | 4 cut(s) | 65, 2245, 2722, 3088 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3234 |
| BstF5I | GGATG | 8 cut(s) | 442, 466, 516, 859, 2548, 2653, 2686, 2854 |
| BstFNI | CGCG | 3 cut(s) | 2854, 2868, 2874 |
| BstHHI | GCGC | 2 cut(s) | 499, 2854 |
| BstMAI | GTCTC | 4 cut(s) | 2172, 2362, 3249, 3338 |
| BstNSI | RCATGY | 2 cut(s) | 1231, 1240 |
| BstSFI | CTRYAG | 3 cut(s) | 608, 3082, 3106 |
| BstSLI | GKGCMC | 4 cut(s) | 30, 797, 957, 2442 |
| BstUI | CGCG | 3 cut(s) | 2854, 2868, 2874 |
| BstV2I | GAAGAC | 2 cut(s) | 629, 2313 |
| BstX2I | RGATCY | 4 cut(s) | 1469, 2040, 2615, 3199 |
| BstXI | CCANNNNNNTGG | 3 cut(s) | 881, 965, 2324 |
| BstYI | RGATCY | 4 cut(s) | 1469, 2040, 2615, 3199 |
| Bsu36I | CCTNAGG | 2 cut(s) | 255, 3294 |
| BsuI | GTATCC | 3 cut(s) | 291, 1642, 1780 |
| BtgI | CCRYGG | 4 cut(s) | 65, 2245, 2722, 3088 |
| BtrI | CACGTC | 1 cut(s) | 2666 |
| BtsCI | GGATG | 8 cut(s) | 442, 466, 516, 859, 2548, 2653, 2686, 2854 |
| BtsI | GCAGTG | 1 cut(s) | 53 |
| BtsIMutI | CAGTG | 5 cut(s) | 53, 1195, 1526, 1557, 3315 |
| CaiI | CAGNNNCTG | 4 cut(s) | 23, 944, 3218, 3337 |
| CciI | TCATGA | 1 cut(s) | 1051 |
| CfoI | GCGC | 2 cut(s) | 499, 2854 |
| Cfr10I | RCCGGY | 1 cut(s) | 145 |
| CseI | GACGC | 3 cut(s) | 2874, 2880, 3281 |
| Csp6I | GTAC | 6 cut(s) | 836, 1240, 1876, 2130, 2450, 2836 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 2218, 2253, 2641, 2674, 2676, 2709 |
| CviQI | GTAC | 6 cut(s) | 836, 1240, 1876, 2130, 2450, 2836 |
| DraIII | CACNNNGTG | 1 cut(s) | 3363 |
| DriI | GACNNNNNGTC | 1 cut(s) | 3066 |
| EaeI | YGGCCR | 3 cut(s) | 406, 922, 1762 |
| Eam1104I | CTCTTC | 1 cut(s) | 1437 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 3066 |
| EarI | CTCTTC | 1 cut(s) | 1437 |
| EciI | GGCGGA | 2 cut(s) | 150, 3216 |
| Ecl136II | GAGCTC | 2 cut(s) | 342, 1658 |
| Eco130I | CCWWGG | 1 cut(s) | 65 |
| Eco24I | GRGCYC | 5 cut(s) | 30, 344, 1660, 2053, 2933 |
| Eco31I | GGTCTC | 2 cut(s) | 2362, 3338 |
| Eco47I | GGWCC | 7 cut(s) | 991, 1259, 1304, 1667, 2696, 2780, 3233 |
| Eco53kI | GAGCTC | 2 cut(s) | 342, 1658 |
| Eco57I | CTGAAG | 1 cut(s) | 816 |
| Eco72I | CACGTG | 1 cut(s) | 1641 |
| Eco81I | CCTNAGG | 2 cut(s) | 255, 3294 |
| EcoICRI | GAGCTC | 2 cut(s) | 342, 1658 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3234 |
| EcoO109I | RGGNCCY | 4 cut(s) | 27, 1667, 2780, 3171 |
| EcoT14I | CCWWGG | 1 cut(s) | 65 |
| EcoT22I | ATGCAT | 1 cut(s) | 1233 |
| EcoT38I | GRGCYC | 5 cut(s) | 30, 344, 1660, 2053, 2933 |
| ErhI | CCWWGG | 1 cut(s) | 65 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1329, 1361, 1758, 1790 |
| FauNDI | CATATG | 2 cut(s) | 432, 1297 |
| FbaI | TGATCA | 2 cut(s) | 2104, 3178 |
| FblI | GTMKAC | 1 cut(s) | 3270 |
| FokI | GGATG | 8 cut(s) | 429, 453, 503, 846, 2555, 2660, 2693, 2861 |
| FriOI | GRGCYC | 5 cut(s) | 30, 344, 1660, 2053, 2933 |
| FspBI | CTAG | 7 cut(s) | 972, 1218, 1320, 2417, 2700, 3114, 3150 |
| GlaI | GCGC | 2 cut(s) | 498, 2853 |
| GsaI | CCCAGC | 3 cut(s) | 664, 998, 2346 |
| GsuI | CTGGAG | 1 cut(s) | 3359 |
| HapII | CCGG | 7 cut(s) | 146, 174, 488, 822, 1467, 2200, 2298 |
| HgaI | GACGC | 3 cut(s) | 2874, 2880, 3281 |
| HhaI | GCGC | 2 cut(s) | 499, 2854 |
| Hin6I | GCGC | 2 cut(s) | 497, 2852 |
| HinP1I | GCGC | 2 cut(s) | 497, 2852 |
| HincII | GTYRAC | 2 cut(s) | 2281, 3271 |
| HindII | GTYRAC | 2 cut(s) | 2281, 3271 |
| HindIII | AAGCTT | 2 cut(s) | 1136, 1338 |
| HpaI | GTTAAC | 1 cut(s) | 2281 |
| HpaII | CCGG | 7 cut(s) | 146, 174, 488, 822, 1467, 2200, 2298 |
| HphI | GGTGA | 6 cut(s) | 1297, 1320, 1954, 2168, 2183, 3349 |
| Hpy166II | GTNNAC | 8 cut(s) | 955, 1262, 1843, 1878, 2281, 2317, 2663, 3271 |
| Hpy188I | TCNGA | 7 cut(s) | 1539, 2377, 2928, 3054, 3078, 3183, 3220 |
| Hpy188III | TCNNGA | 8 cut(s) | 116, 257, 939, 1052, 1473, 2200, 2417, 3212 |
| Hpy8I | GTNNAC | 8 cut(s) | 955, 1262, 1843, 1878, 2281, 2317, 2663, 3271 |
| Hpy99I | CGWCG | 3 cut(s) | 3042, 3132, 3275 |
| HpyAV | CCTTC | 9 cut(s) | 64, 873, 921, 1103, 1302, 1513, 1784, 2853, 3190 |
| HpyCH4III | ACNGT | 6 cut(s) | 1244, 1521, 1552, 1992, 2941, 3137 |
| HpyCH4IV | ACGT | 6 cut(s) | 1640, 2116, 2128, 2235, 2467, 2665 |
| HpySE526I | ACGT | 6 cut(s) | 1640, 2116, 2128, 2235, 2467, 2665 |
| HspAI | GCGC | 2 cut(s) | 497, 2852 |
| Kpn2I | TCCGGA | 1 cut(s) | 2199 |
| KroI | GCCGGC | 1 cut(s) | 145 |
| KroNI | GCCGGC | 1 cut(s) | 147 |
| Ksp22I | TGATCA | 2 cut(s) | 2104, 3178 |
| KspAI | GTTAAC | 1 cut(s) | 2281 |
| LguI | GCTCTTC | 1 cut(s) | 1437 |
| MaeI | CTAG | 7 cut(s) | 972, 1218, 1320, 2417, 2700, 3114, 3150 |
| MaeII | ACGT | 6 cut(s) | 1640, 2116, 2128, 2235, 2467, 2665 |
| MaeIII | GTNAC | 5 cut(s) | 414, 1100, 1360, 2156, 3131 |
| MflI | RGATCY | 4 cut(s) | 1469, 2040, 2615, 3199 |
| MhlI | GDGCHC | 8 cut(s) | 30, 344, 797, 957, 1660, 2053, 2442, 2933 |
| MlsI | TGGCCA | 2 cut(s) | 924, 1764 |
| MluNI | TGGCCA | 2 cut(s) | 924, 1764 |
| MlyI | GAGTC | 6 cut(s) | 559, 664, 1057, 2510, 3058, 3076 |
| MmeI | TCCRAC | 6 cut(s) | 1057, 1592, 2906, 3032, 3038, 3056 |
| Mox20I | TGGCCA | 2 cut(s) | 924, 1764 |
| Mph1103I | ATGCAT | 1 cut(s) | 1233 |
| MroI | TCCGGA | 1 cut(s) | 2199 |
| MroNI | GCCGGC | 1 cut(s) | 145 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2896, 2940 |
| MscI | TGGCCA | 2 cut(s) | 924, 1764 |
| MseI | TTAA | 7 cut(s) | 1040, 1493, 1755, 1929, 2189, 2280, 2405 |
| MslI | CAYNNNNRTG | 3 cut(s) | 95, 963, 1417 |
| Msp20I | TGGCCA | 2 cut(s) | 924, 1764 |
| MspA1I | CMGCKG | 2 cut(s) | 11, 2399 |
| MspI | CCGG | 7 cut(s) | 146, 174, 488, 822, 1467, 2200, 2298 |
| Mva1269I | GAATGC | 1 cut(s) | 1806 |
| MvnI | CGCG | 3 cut(s) | 2854, 2868, 2874 |
| NaeI | GCCGGC | 1 cut(s) | 147 |
| NciI | CCSGG | 4 cut(s) | 174, 488, 823, 2299 |
| NcoI | CCATGG | 1 cut(s) | 65 |
| NdeI | CATATG | 2 cut(s) | 432, 1297 |
| NgoMIV | GCCGGC | 1 cut(s) | 145 |
| NmuCI | GTSAC | 2 cut(s) | 414, 2156 |
| NsiI | ATGCAT | 1 cut(s) | 1233 |
| NspI | RCATGY | 2 cut(s) | 1231, 1240 |
| NspV | TTCGAA | 1 cut(s) | 2944 |
| OliI | CACNNNNGTG | 1 cut(s) | 95 |
| PaeI | GCATGC | 1 cut(s) | 1231 |
| PagI | TCATGA | 1 cut(s) | 1051 |
| PasI | CCCWGGG | 1 cut(s) | 643 |
| PciI | ACATGT | 1 cut(s) | 1236 |
| PciSI | GCTCTTC | 1 cut(s) | 1437 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 236, 3037 |
| PctI | GAATGC | 1 cut(s) | 1806 |
| PdiI | GCCGGC | 1 cut(s) | 147 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2896, 2940 |
| PfeI | GAWTC | 6 cut(s) | 112, 811, 1185, 2880, 2897, 3215 |
| PflFI | GACNNNGTC | 2 cut(s) | 2183, 2312 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 359, 529 |
| PleI | GAGTC | 6 cut(s) | 558, 664, 1056, 2510, 3057, 3075 |
| PmaCI | CACGTG | 1 cut(s) | 1641 |
| PmlI | CACGTG | 1 cut(s) | 1641 |
| PpsI | GAGTC | 6 cut(s) | 558, 664, 1056, 2510, 3057, 3075 |
| Ppu21I | YACGTR | 3 cut(s) | 1641, 2117, 2468 |
| PpuMI | RGGWCCY | 2 cut(s) | 1667, 2780 |
| PscI | ACATGT | 1 cut(s) | 1236 |
| PshBI | ATTAAT | 1 cut(s) | 1755 |
| Psp124BI | GAGCTC | 2 cut(s) | 344, 1660 |
| Psp5II | RGGWCCY | 2 cut(s) | 1667, 2780 |
| PspCI | CACGTG | 1 cut(s) | 1641 |
| PspFI | CCCAGC | 3 cut(s) | 660, 994, 2342 |
| PspOMI | GGGCCC | 1 cut(s) | 26 |
| PspPPI | RGGWCCY | 2 cut(s) | 1667, 2780 |
| PstI | CTGCAG | 1 cut(s) | 612 |
| PstNI | CAGNNNCTG | 4 cut(s) | 23, 944, 3218, 3337 |
| PsuI | RGATCY | 4 cut(s) | 1469, 2040, 2615, 3199 |
| PsyI | GACNNNGTC | 2 cut(s) | 2183, 2312 |
| PvuII | CAGCTG | 1 cut(s) | 2399 |
| RsaI | GTAC | 6 cut(s) | 837, 1241, 1877, 2131, 2451, 2837 |
| RsaNI | GTAC | 6 cut(s) | 836, 1240, 1876, 2130, 2450, 2836 |
| RseI | CAYNNNNRTG | 3 cut(s) | 95, 963, 1417 |
| SacI | GAGCTC | 2 cut(s) | 344, 1660 |
| SalI | GTCGAC | 1 cut(s) | 3269 |
| SapI | GCTCTTC | 1 cut(s) | 1437 |
| SaqAI | TTAA | 7 cut(s) | 1040, 1493, 1755, 1929, 2189, 2280, 2405 |
| SchI | GAGTC | 6 cut(s) | 559, 664, 1057, 2510, 3058, 3076 |
| SduI | GDGCHC | 8 cut(s) | 30, 344, 797, 957, 1660, 2053, 2442, 2933 |
| SfcI | CTRYAG | 3 cut(s) | 608, 3082, 3106 |
| SfuI | TTCGAA | 1 cut(s) | 2944 |
| SinI | GGWCC | 7 cut(s) | 991, 1259, 1304, 1667, 2696, 2780, 3233 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 95, 963, 1417 |
| SmlI | CTYRAG | 1 cut(s) | 2166 |
| SmoI | CTYRAG | 1 cut(s) | 2166 |
| SphI | GCATGC | 1 cut(s) | 1231 |
| SspI | AATATT | 3 cut(s) | 590, 1088, 1948 |
| SspMI | CTAG | 7 cut(s) | 972, 1218, 1320, 2417, 2700, 3114, 3150 |
| SstI | GAGCTC | 2 cut(s) | 344, 1660 |
| StyI | CCWWGG | 1 cut(s) | 65 |
| TaaI | ACNGT | 6 cut(s) | 1244, 1521, 1552, 1992, 2941, 3137 |
| TaiI | ACGT | 6 cut(s) | 1643, 2119, 2131, 2238, 2470, 2668 |
| TaqI | TCGA | 5 cut(s) | 230, 1798, 2883, 2944, 3270 |
| TatI | WGTACW | 3 cut(s) | 835, 1239, 1875 |
| TauI | GCSGC | 5 cut(s) | 888, 2532, 2535, 2568, 3027 |
| TfiI | GAWTC | 6 cut(s) | 112, 811, 1185, 2880, 2897, 3215 |
| Tru1I | TTAA | 7 cut(s) | 1040, 1493, 1755, 1929, 2189, 2280, 2405 |
| Tru9I | TTAA | 7 cut(s) | 1040, 1493, 1755, 1929, 2189, 2280, 2405 |
| TscAI | CASTG | 5 cut(s) | 60, 1195, 1526, 1557, 3315 |
| TseFI | GTSAC | 2 cut(s) | 414, 2156 |
| Tsp45I | GTSAC | 2 cut(s) | 414, 2156 |
| TspRI | CASTG | 5 cut(s) | 60, 1195, 1526, 1557, 3315 |
| Tth111I | GACNNNGTC | 2 cut(s) | 2183, 2312 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 359, 529 |
| VneI | GTGCAC | 1 cut(s) | 953 |
| VpaK11BI | GGWCC | 7 cut(s) | 991, 1259, 1304, 1667, 2696, 2780, 3233 |
| VspI | ATTAAT | 1 cut(s) | 1755 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3234 |
| XapI | RAATTY | 3 cut(s) | 480, 1610, 1827 |
| XbaI | TCTAGA | 1 cut(s) | 2416 |
| XceI | RCATGY | 2 cut(s) | 1231, 1240 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 202, 1073, 1946 |
| XmiI | GTMKAC | 1 cut(s) | 3270 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2896, 2940 |
| XspI | CTAG | 7 cut(s) | 972, 1218, 1320, 2417, 2700, 3114, 3150 |
| Zsp2I | ATGCAT | 1 cut(s) | 1233 |