Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0001635

Physical Location & Seq

Genomic Coordinates Reverse (-)

25681390 .. 25687439

Gene Structure 6050 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g23100.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2004 bp

ATGCAGAAAAGAACGAGAGAGACGCAGAGCTCTTCAGCCTCTAGGTATACTCTTCTTTCTTCTTCGTCTTCTTCGTTTCTTCTTCTAGCTCCTTCGTCTCTGTTGAATCGGAGAACAATGAAGACCTCTCTCAGAAAGTTGCGAGGTCTCGCACTTCCCAAGCACGAAGCTAAGGACCACCGGATCGCTCTTCAGCCGCTGGCTCAATTGGACGAGCTCGCTCAGGCTTCTCAGGACATGCAAGATATGAGGGACTGCTATGATAGCTTACTTTCGGCAGCTGCAGCGACAGCAAATAGCGCTTACGAATTTTCGGAGTCATTGCGGGAAATGGGTGCTTGTCTTCTTCAGAAAACTGCATTGAATGACGATGAAGATGGTGGTAAAGTTCTGTTGATGCTAGGGAAATTGCAGTATGAACTCCACAAACTTGTTGATAGCTATCGCTCTCATATATTCCAAACTATTGCAGTTCCATCAGAATCTCTTCTCAATGAACTTCAAACAGTTGAGGAGATGAAGATCCAGTGTGATGAGAAAAGAGACGTATATGAGTATATGCTAAAAAGACAGAAAGAAAAAGGGAGGTTAAGAGGTGGAAAAGGAGAGACCTTTTCGGTGCAGCAAATACAACTTGCTCGTGATGAATATGATGAGGAGGCAACTTTATTTGTTTTCCGGTTGAAATCTCTTAAGCAAGGACAATCGCGTAGTTTGCTCACACAGGCAGCTCGGCATCATGCTGCTCAGTTATGCTTCTTCAAGAAGGCACTTAGTTCTGTTGAAGCAGCAGAACCCCATGTTAAATTGGTAACTGAACAGCAGCATATTGATTACAAGTTCAATGGGCTAGATGATGAAGGGGACGGTGACAACGATGATGATGATAATGATGACGATGATTCCTCTTTTGTGAATGATGACGGAGAATTAAGCTTTGACTATGGAAATAATGAGCGAGAGCCAGATGTTTCTACAACACGAAGCTCAATGGAGTTGGATCAGGTCGACATCACCTTTCCCAAGATATCCAGTGTGGAAGCTTTGAAGGACAGACTTCGCAGAAATTCATTTTCGTTTAAGGGCAGGGCATTCAGCCAATCCGCCCCGCTCTTTCCTGAAAATAAGTTGGACCAAACTGAAAAAATGAGACATTTGCAGCCATCATTATCGCGGAAGTTCCACTCGTATGTACTACCCACACCTGTTGATACAAACCATTCAGTTTCTACTGGACCTGGTAATACAGTTCCCGAAACTGTACAGACAAGGTTAAGTGGCCGGCAGAATTTGTGGCATTCATCGCCCTTGGAACCAAATAATGAAAAGATCATGGGAGATAAGAAACCTGCTGGACCAACAGTAATAAATGCACAGTCAGTCCTCAGAGAAAGCAACAATAATATTGCATCCCATCGATTACCCCCTCCTCTTGCAGGTCGTATGTTGTCTACAGGGCTGGATCCCCTGGCTGCTTTTGATTCTAAGAAGTTAAAAAGACTGGCGTTTTCTGGTCCTCTAACAAGTAAGCATTCGTCTTCCAAGCCTGTATCAGTTGGATCTCACCAAATGTTTTCTGGACCTCTGTTGAGAAATCCAATACCTCAACCTCCATCAGTATCACCACCTAAAGTATCTCCAAATGCATCTCCTACTTTTATGTCCTCGCCTAAAATAAGTGAGCTTCATGAGCTTCCTAGGCCTCCTGTTGGCTTGACCTCCAAGTCTGCAAGACCTCTAGTTGGCCATTCAGCCCCCTTGGCACCCAGAGCACAAATGCAATCTACTTCAAGTAAACCACCGTTGTCACCTACAGCTTCTCCTCTGCCAACACCTCCTCAGATCATCCCCCGTAGTTTCTCTATACCTTCAAGGAGTCCTAGAGTGACAGAGTTGCATGTATCTAAATCACACGAGGTCTTTCCTGTTCCTGAAAAGTCTGAAGACGTTGCTTCACCTCCTTTGAGTCCAATAGCCTTATCTAACTCACCTAAGAAATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BAR BAR_3

Protein Analysis

668

Amino Acids

73.72

Weight (kDa)

8.4

Isoelectric Point (pI)

58.99

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001635)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33490 AT2G33490 AT2G33490
fragaria_vesca	FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_6g54020 FvH4_6g54020 FvH4_6g54020
malus_domestica	MD09G1006200.v1.1 MD13G1125400.v1.1 MD16G1126200.v1.1 MD17G1010200.v1.1
prunus_persica	Prupe.1G220000_v2.0.a1 Prupe.3G310800_v2.0.a1 Prupe.3G310800_v2.0.a1
pyrus_communis	pycom111g00450 pycom13g10930 pycom13g10940 pycom16g10730 pycom17g00470
rosa_chinensis	RchiOBHm_Chr2g0176201 RchiOBHm_Chr4g0429401
rosa_laevigata	RLG00000007073 RLG00000022389
rosa_multiflora	Rmu_sc0000363.1_g000044 Rmu_sc0003708.1_g000020 Rmu_sc0009677.1_g000013 Rmu_sc0009677.1_g000014
rosa_roxburghii	Rroxscaffold_2G00076680 Rroxscaffold_5G00371040
rosa_rugosa	Rorug02G0591700 Rorug04G0235800 Rorug04G0235800
rosa_samantha	Rh2AG670300 Rh2BG681800 Rh2CG644600 Rh2DG695400 Rh4AG291500 Rh4BG297200 Rh4CG312800 Rh4DG294300
rosa_wichuraiana	Rw2G054980 Rw4G025240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1723
Acc36I	ACCTGC	2 cut(s)	1357, 1427
AccB1I	GGYRCC	1 cut(s)	1762
AccBSI	CCGCTC	1 cut(s)	1111
AccI	GTMKAC	3 cut(s)	47, 1008, 1451
AccII	CGCG	2 cut(s)	709, 1174
AciI	CCGC	5 cut(s)	197, 325, 1104, 1109, 1174
AclWI	GGATC	6 cut(s)	191, 517, 1008, 1457, 1470, 1567
AcoI	YGGCCR	2 cut(s)	1279, 1744
AcsI	RAATTY	3 cut(s)	308, 1066, 1288
AcuI	CTGAAG	4 cut(s)	18, 176, 332, 1962
AfaI	GTAC	2 cut(s)	1194, 1263
AfeI	AGCGCT	1 cut(s)	301
AfiI	CCNNNNNNNGG	3 cut(s)	1436, 1709, 1742
AflII	CTTAAG	1 cut(s)	692
AjnI	CCWGG	2 cut(s)	1237, 1467
Alw21I	GWGCWC	3 cut(s)	32, 219, 1774
Alw26I	GTCTC	6 cut(s)	14, 102, 152, 537, 602, 1144
AlwI	GGATC	6 cut(s)	191, 517, 1008, 1457, 1470, 1567
AlwNI	CAGNNNCTG	1 cut(s)	199
Aor51HI	AGCGCT	1 cut(s)	301
AoxI	GGCC	3 cut(s)	1279, 1700, 1744
ApoI	RAATTY	3 cut(s)	308, 1066, 1288
Asp700I	GAANNNNTTC	1 cut(s)	486
AspA2I	CCTAGG	1 cut(s)	1697
AspLEI	GCGC	1 cut(s)	302
AspS9I	GGNCC	6 cut(s)	175, 1132, 1235, 1355, 1514, 1580
AsuHPI	GGTGA	7 cut(s)	881, 1006, 1556, 1614, 1800, 1947, 1980
AvaII	GGWCC	6 cut(s)	175, 1132, 1235, 1355, 1514, 1580
AvrII	CCTAGG	1 cut(s)	1697
BalI	TGGCCA	1 cut(s)	1746
BamHI	GGATCC	1 cut(s)	1462
BanI	GGYRCC	1 cut(s)	1762
BanII	GRGCYC	2 cut(s)	32, 219
BauI	CACGAG	2 cut(s)	639, 1913
BbsI	GAAGAC	5 cut(s)	60, 128, 335, 1530, 1950
Bbv12I	GWGCWC	3 cut(s)	32, 219, 1774
BccI	CCATC	5 cut(s)	371, 484, 1171, 1422, 1621
BciT130I	CCWGG	2 cut(s)	1239, 1469
BcoDI	GTCTC	6 cut(s)	14, 102, 152, 537, 602, 1144
BfaI	CTAG	7 cut(s)	42, 86, 401, 851, 1698, 1739, 1881
BfmI	CTRYAG	3 cut(s)	282, 1452, 1812
BfoI	RGCGCY	1 cut(s)	303
BfrI	CTTAAG	1 cut(s)	692
BfuAI	ACCTGC	2 cut(s)	1357, 1427
BglI	GCCNNNNNGGC	1 cut(s)	1760
BlnI	CCTAGG	1 cut(s)	1697
Bme1390I	CCNGG	2 cut(s)	1239, 1469
Bme18I	GGWCC	6 cut(s)	175, 1132, 1235, 1355, 1514, 1580
BmgT120I	GGNCC	6 cut(s)	175, 1132, 1235, 1355, 1514, 1580
BmiI	GGNNCC	3 cut(s)	1314, 1464, 1764
BmrFI	CCNGG	2 cut(s)	1239, 1469
BmsI	GCATC	4 cut(s)	387, 745, 1418, 1655
BpiI	GAAGAC	5 cut(s)	60, 128, 335, 1530, 1950
Bpu10I	CCTNAGC	2 cut(s)	171, 222
Bsa29I	ATCGAT	1 cut(s)	1417
BsaBI	GATNNNNATC	2 cut(s)	441, 521
BsaI	GGTCTC	2 cut(s)	152, 602
BsaJI	CCNNGG	4 cut(s)	1308, 1467, 1697, 1758
BsaWI	WCCGGW	2 cut(s)	180, 678
BsaXI	ACNNNNNCTCC	2 cut(s)	1804, 1834
Bsc4I	CCNNNNNNNGG	3 cut(s)	1436, 1709, 1742
Bse118I	RCCGGY	1 cut(s)	1281
Bse1I	ACTGG	4 cut(s)	526, 1032, 1237, 1506
Bse3DI	GCAATG	1 cut(s)	320
Bse8I	GATNNNNATC	2 cut(s)	441, 521
BseBI	CCWGG	2 cut(s)	1239, 1469
BseCI	ATCGAT	1 cut(s)	1417
BseDI	CCNNGG	4 cut(s)	1308, 1467, 1697, 1758
BseGI	GGATG	2 cut(s)	1409, 1845
BseJI	GATNNNNATC	2 cut(s)	441, 521
BseLI	CCNNNNNNNGG	3 cut(s)	1436, 1709, 1742
BseMI	GCAATG	1 cut(s)	320
BseMII	CTCAG	6 cut(s)	145, 236, 245, 761, 1399, 1853
BseNI	ACTGG	4 cut(s)	526, 1032, 1237, 1506
BseRI	GAGGAG	5 cut(s)	527, 671, 1419, 1812, 1827
BsgI	GTGCAG	1 cut(s)	641
Bsh1236I	CGCG	2 cut(s)	709, 1174
BshFI	GGCC	3 cut(s)	1281, 1702, 1746
BshNI	GGYRCC	1 cut(s)	1762
BshVI	ATCGAT	1 cut(s)	1417
BsiHKAI	GWGCWC	3 cut(s)	32, 219, 1774
BsiSI	CCGG	3 cut(s)	181, 679, 1282
BslFI	GGGAC	2 cut(s)	266, 878
BslI	CCNNNNNNNGG	3 cut(s)	1436, 1709, 1742
BsmAI	GTCTC	6 cut(s)	14, 102, 152, 537, 602, 1144
BsmBI	CGTCTC	3 cut(s)	14, 102, 537
BsmFI	GGGAC	2 cut(s)	266, 878
BsmI	GAATGC	3 cut(s)	1091, 1297, 1531
BsnI	GGCC	3 cut(s)	1281, 1702, 1746
Bso31I	GGTCTC	2 cut(s)	152, 602
Bsp1286I	GDGCHC	3 cut(s)	32, 219, 1774
Bsp1407I	TGTACA	1 cut(s)	1261
Bsp143I	GATC	7 cut(s)	183, 522, 1000, 1329, 1462, 1559, 1842
BspACI	CCGC	5 cut(s)	197, 325, 1104, 1109, 1174
BspANI	GGCC	3 cut(s)	1281, 1702, 1746
BspCNI	CTCAG	6 cut(s)	144, 235, 244, 760, 1398, 1852
BspDI	ATCGAT	1 cut(s)	1417
BspFNI	CGCG	2 cut(s)	709, 1174
BspHI	TCATGA	1 cut(s)	1687
BspLI	GGNNCC	3 cut(s)	1314, 1464, 1764
BspMAI	CTGCAG	1 cut(s)	286
BspMI	ACCTGC	2 cut(s)	1357, 1427
BspPI	GGATC	6 cut(s)	191, 517, 1008, 1457, 1470, 1567
BspQI	GCTCTTC	2 cut(s)	37, 195
BspT107I	GGYRCC	1 cut(s)	1762
BspTI	CTTAAG	1 cut(s)	692
BspTNI	GGTCTC	2 cut(s)	152, 602
BsrBI	CCGCTC	1 cut(s)	1111
BsrDI	GCAATG	1 cut(s)	320
BsrFI	RCCGGY	1 cut(s)	1281
BsrGI	TGTACA	1 cut(s)	1261
BsrI	ACTGG	4 cut(s)	526, 1032, 1237, 1506
BssAI	RCCGGY	1 cut(s)	1281
BssECI	CCNNGG	4 cut(s)	1308, 1467, 1697, 1758
BssMI	GATC	7 cut(s)	183, 522, 1000, 1329, 1462, 1559, 1842
BssNAI	GTATAC	1 cut(s)	48
BssSI	CACGAG	2 cut(s)	639, 1913
BssT1I	CCWWGG	3 cut(s)	1308, 1697, 1758
Bst1107I	GTATAC	1 cut(s)	48
Bst2BI	CACGAG	2 cut(s)	639, 1913
Bst2UI	CCWGG	2 cut(s)	1239, 1469
Bst4CI	ACNGT	7 cut(s)	508, 869, 1249, 1261, 1363, 1377, 1803
Bst6I	CTCTTC	4 cut(s)	37, 57, 195, 492
BstAFI	CTTAAG	1 cut(s)	692
BstAUI	TGTACA	1 cut(s)	1261
BstC8I	GCNNGC	3 cut(s)	201, 219, 1283
BstENI	CCTNNNNNAGG	1 cut(s)	1434
BstF5I	GGATG	2 cut(s)	1409, 1845
BstFNI	CGCG	2 cut(s)	709, 1174
BstH2I	RGCGCY	1 cut(s)	303
BstHHI	GCGC	1 cut(s)	302
BstKTI	GATC	7 cut(s)	186, 525, 1003, 1332, 1465, 1562, 1845
BstMAI	GTCTC	6 cut(s)	14, 102, 152, 537, 602, 1144
BstMBI	GATC	7 cut(s)	183, 522, 1000, 1329, 1462, 1559, 1842
BstNI	CCWGG	2 cut(s)	1239, 1469
BstNSI	RCATGY	2 cut(s)	241, 1901
BstSCI	CCNGG	2 cut(s)	1237, 1467
BstSFI	CTRYAG	3 cut(s)	282, 1452, 1812
BstUI	CGCG	2 cut(s)	709, 1174
BstV2I	GAAGAC	5 cut(s)	60, 128, 335, 1530, 1950
BstX2I	RGATCY	3 cut(s)	522, 1462, 1559
BstYI	RGATCY	3 cut(s)	522, 1462, 1559
BstZ17I	GTATAC	1 cut(s)	48
Bsu15I	ATCGAT	1 cut(s)	1417
BsuRI	GGCC	3 cut(s)	1281, 1702, 1746
BsuTUI	ATCGAT	1 cut(s)	1417
BtgZI	GCGATG	1 cut(s)	1287
BtsCI	GGATG	2 cut(s)	1409, 1845
BtsIMutI	CAGTG	2 cut(s)	533, 1039
BveI	ACCTGC	2 cut(s)	1357, 1427
Cac8I	GCNNGC	3 cut(s)	201, 219, 1283
CaiI	CAGNNNCTG	1 cut(s)	199
CciI	TCATGA	1 cut(s)	1687
CfoI	GCGC	1 cut(s)	302
Cfr10I	RCCGGY	1 cut(s)	1281
Cfr13I	GGNCC	6 cut(s)	175, 1132, 1235, 1355, 1514, 1580
ClaI	ATCGAT	1 cut(s)	1417
CseI	GACGC	1 cut(s)	31
CsiI	ACCWGGT	1 cut(s)	1237
Csp6I	GTAC	2 cut(s)	1193, 1262
CspCI	CAANNNNNGTGG	2 cut(s)	1189, 1224
CviAII	CATG	6 cut(s)	238, 740, 800, 1333, 1688, 1898
CviQI	GTAC	2 cut(s)	1193, 1262
DpnI	GATC	7 cut(s)	185, 524, 1002, 1331, 1464, 1561, 1844
DpnII	GATC	7 cut(s)	183, 522, 1000, 1329, 1462, 1559, 1842
DrdI	GACNNNNNNGTC	1 cut(s)	1723
DseDI	GACNNNNNNGTC	1 cut(s)	1723
EaeI	YGGCCR	2 cut(s)	1279, 1744
Eam1104I	CTCTTC	4 cut(s)	37, 57, 195, 492
EarI	CTCTTC	4 cut(s)	37, 57, 195, 492
EciI	GGCGGA	1 cut(s)	1093
Ecl136II	GAGCTC	2 cut(s)	30, 217
Eco130I	CCWWGG	3 cut(s)	1308, 1697, 1758
Eco147I	AGGCCT	1 cut(s)	1702
Eco24I	GRGCYC	2 cut(s)	32, 219
Eco31I	GGTCTC	2 cut(s)	152, 602
Eco32I	GATATC	1 cut(s)	1029
Eco47I	GGWCC	6 cut(s)	175, 1132, 1235, 1355, 1514, 1580
Eco47III	AGCGCT	1 cut(s)	301
Eco53kI	GAGCTC	2 cut(s)	30, 217
Eco57I	CTGAAG	4 cut(s)	18, 176, 332, 1962
EcoICRI	GAGCTC	2 cut(s)	30, 217
EcoNI	CCTNNNNNAGG	1 cut(s)	1434
EcoRII	CCWGG	2 cut(s)	1237, 1467
EcoRV	GATATC	1 cut(s)	1029
EcoT14I	CCWWGG	3 cut(s)	1308, 1697, 1758
EcoT22I	ATGCAT	1 cut(s)	1648
EcoT38I	GRGCYC	2 cut(s)	32, 219
ErhI	CCWWGG	3 cut(s)	1308, 1697, 1758
Esp3I	CGTCTC	3 cut(s)	14, 102, 537
FaeI	CATG	6 cut(s)	241, 743, 803, 1336, 1691, 1901
FaqI	GGGAC	2 cut(s)	266, 878
FatI	CATG	6 cut(s)	237, 739, 799, 1332, 1687, 1897
FauI	CCCGC	2 cut(s)	318, 1116
FblI	GTMKAC	3 cut(s)	47, 1008, 1451
FokI	GGATG	2 cut(s)	1396, 1832
FriOI	GRGCYC	2 cut(s)	32, 219
FspBI	CTAG	7 cut(s)	42, 86, 401, 851, 1698, 1739, 1881
GlaI	GCGC	1 cut(s)	301
HaeII	RGCGCY	1 cut(s)	303
HaeIII	GGCC	3 cut(s)	1281, 1702, 1746
HapII	CCGG	3 cut(s)	181, 679, 1282
HgaI	GACGC	1 cut(s)	31
HhaI	GCGC	1 cut(s)	302
Hin1II	CATG	6 cut(s)	241, 743, 803, 1336, 1691, 1901
Hin6I	GCGC	1 cut(s)	300
HinP1I	GCGC	1 cut(s)	300
HincII	GTYRAC	1 cut(s)	1009
HindII	GTYRAC	1 cut(s)	1009
HindIII	AAGCTT	2 cut(s)	934, 1041
HinfI	GANTC	7 cut(s)	106, 317, 482, 902, 1481, 1876, 1966
HpaII	CCGG	3 cut(s)	181, 679, 1282
HphI	GGTGA	7 cut(s)	881, 1006, 1556, 1614, 1800, 1947, 1980
Hpy166II	GTNNAC	4 cut(s)	48, 1009, 1452, 1796
Hpy188I	TCNGA	8 cut(s)	111, 134, 316, 351, 481, 1388, 1842, 1942
Hpy188III	TCNNGA	8 cut(s)	233, 641, 763, 1118, 1253, 1578, 1688, 1931
Hpy8I	GTNNAC	4 cut(s)	48, 1009, 1452, 1796
HpyAV	CCTTC	5 cut(s)	102, 760, 854, 1042, 1878
HpyCH4III	ACNGT	7 cut(s)	508, 869, 1249, 1261, 1363, 1377, 1803
HpyCH4IV	ACGT	2 cut(s)	546, 1947
HpySE526I	ACGT	2 cut(s)	546, 1947
Hsp92II	CATG	6 cut(s)	241, 743, 803, 1336, 1691, 1901
HspAI	GCGC	1 cut(s)	300
KroI	GCCGGC	1 cut(s)	1281
KroNI	GCCGGC	1 cut(s)	1283
Kzo9I	GATC	7 cut(s)	183, 522, 1000, 1329, 1462, 1559, 1842
LguI	GCTCTTC	2 cut(s)	37, 195
LmnI	GCTCC	1 cut(s)	94
LweI	GCATC	4 cut(s)	387, 745, 1418, 1655
MabI	ACCWGGT	1 cut(s)	1237
MaeI	CTAG	7 cut(s)	42, 86, 401, 851, 1698, 1739, 1881
MaeII	ACGT	2 cut(s)	546, 1947
MaeIII	GTNAC	4 cut(s)	811, 869, 1806, 1885
MalI	GATC	7 cut(s)	185, 524, 1002, 1331, 1464, 1561, 1844
MbiI	CCGCTC	1 cut(s)	1111
MboI	GATC	7 cut(s)	183, 522, 1000, 1329, 1462, 1559, 1842
MfeI	CAATTG	1 cut(s)	206
MflI	RGATCY	3 cut(s)	522, 1462, 1559
MhlI	GDGCHC	3 cut(s)	32, 219, 1774
MlsI	TGGCCA	1 cut(s)	1746
MluCI	AATT	7 cut(s)	206, 308, 407, 806, 929, 1066, 1288
MluNI	TGGCCA	1 cut(s)	1746
MlyI	GAGTC	3 cut(s)	326, 1885, 1975
MmeI	TCCRAC	3 cut(s)	978, 1110, 1537
Mox20I	TGGCCA	1 cut(s)	1746
Mph1103I	ATGCAT	1 cut(s)	1648
MroNI	GCCGGC	1 cut(s)	1281
MroXI	GAANNNNTTC	1 cut(s)	486
MscI	TGGCCA	1 cut(s)	1746
MseI	TTAA	7 cut(s)	590, 693, 804, 932, 1080, 1274, 1493
MslI	CAYNNNNRTG	1 cut(s)	1188
Msp20I	TGGCCA	1 cut(s)	1746
MspA1I	CMGCKG	2 cut(s)	199, 281
MspCI	CTTAAG	1 cut(s)	692
MspI	CCGG	3 cut(s)	181, 679, 1282
MspR9I	CCNGG	2 cut(s)	1239, 1469
MunI	CAATTG	1 cut(s)	206
Mva1269I	GAATGC	3 cut(s)	1091, 1297, 1531
MvaI	CCWGG	2 cut(s)	1239, 1469
MvnI	CGCG	2 cut(s)	709, 1174
NaeI	GCCGGC	1 cut(s)	1283
NdeII	GATC	7 cut(s)	183, 522, 1000, 1329, 1462, 1559, 1842
NgoMIV	GCCGGC	1 cut(s)	1281
NlaIII	CATG	6 cut(s)	241, 743, 803, 1336, 1691, 1901
NlaIV	GGNNCC	3 cut(s)	1314, 1464, 1764
NmeAIII	GCCGAG	1 cut(s)	712
NmuCI	GTSAC	3 cut(s)	869, 1806, 1885
NsiI	ATGCAT	1 cut(s)	1648
NspI	RCATGY	2 cut(s)	241, 1901
PagI	TCATGA	1 cut(s)	1687
PceI	AGGCCT	1 cut(s)	1702
PciSI	GCTCTTC	2 cut(s)	37, 195
PcsI	WCGNNNNNNNCGW	2 cut(s)	71, 873
PctI	GAATGC	3 cut(s)	1091, 1297, 1531
PdiI	GCCGGC	1 cut(s)	1283
PdmI	GAANNNNTTC	1 cut(s)	486
PfeI	GAWTC	4 cut(s)	106, 482, 902, 1481
PleI	GAGTC	3 cut(s)	325, 1884, 1974
PpsI	GAGTC	3 cut(s)	325, 1884, 1974
Psp124BI	GAGCTC	2 cut(s)	32, 219
Psp6I	CCWGG	2 cut(s)	1237, 1467
PspGI	CCWGG	2 cut(s)	1237, 1467
PspN4I	GGNNCC	3 cut(s)	1314, 1464, 1764
PspPI	GGNCC	6 cut(s)	175, 1132, 1235, 1355, 1514, 1580
PstI	CTGCAG	1 cut(s)	286
PstNI	CAGNNNCTG	1 cut(s)	199
PsuI	RGATCY	3 cut(s)	522, 1462, 1559
PvuII	CAGCTG	1 cut(s)	281
RsaI	GTAC	2 cut(s)	1194, 1263
RsaNI	GTAC	2 cut(s)	1193, 1262
RseI	CAYNNNNRTG	1 cut(s)	1188
SacI	GAGCTC	2 cut(s)	32, 219
SalI	GTCGAC	1 cut(s)	1007
SapI	GCTCTTC	2 cut(s)	37, 195
SaqAI	TTAA	7 cut(s)	590, 693, 804, 932, 1080, 1274, 1493
Sau3AI	GATC	7 cut(s)	183, 522, 1000, 1329, 1462, 1559, 1842
Sau96I	GGNCC	6 cut(s)	175, 1132, 1235, 1355, 1514, 1580
SchI	GAGTC	3 cut(s)	326, 1885, 1975
ScrFI	CCNGG	2 cut(s)	1239, 1469
SduI	GDGCHC	3 cut(s)	32, 219, 1774
SexAI	ACCWGGT	1 cut(s)	1237
SfaNI	GCATC	4 cut(s)	387, 745, 1418, 1655
SfcI	CTRYAG	3 cut(s)	282, 1452, 1812
SinI	GGWCC	6 cut(s)	175, 1132, 1235, 1355, 1514, 1580
SmiMI	CAYNNNNRTG	1 cut(s)	1188
SmlI	CTYRAG	1 cut(s)	692
SmoI	CTYRAG	1 cut(s)	692
Sse9I	AATT	7 cut(s)	206, 308, 407, 806, 929, 1066, 1288
SseBI	AGGCCT	1 cut(s)	1702
SsiI	CCGC	5 cut(s)	197, 325, 1104, 1109, 1174
SspI	AATATT	1 cut(s)	1405
SspMI	CTAG	7 cut(s)	42, 86, 401, 851, 1698, 1739, 1881
SstI	GAGCTC	2 cut(s)	32, 219
StuI	AGGCCT	1 cut(s)	1702
StyD4I	CCNGG	2 cut(s)	1237, 1467
StyI	CCWWGG	3 cut(s)	1308, 1697, 1758
TaaI	ACNGT	7 cut(s)	508, 869, 1249, 1261, 1363, 1377, 1803
TaiI	ACGT	2 cut(s)	549, 1950
TaqI	TCGA	2 cut(s)	1008, 1417
TasI	AATT	7 cut(s)	206, 308, 407, 806, 929, 1066, 1288
TatI	WGTACW	2 cut(s)	1192, 1261
TauI	GCSGC	1 cut(s)	199
TfiI	GAWTC	4 cut(s)	106, 482, 902, 1481
Tru1I	TTAA	7 cut(s)	590, 693, 804, 932, 1080, 1274, 1493
Tru9I	TTAA	7 cut(s)	590, 693, 804, 932, 1080, 1274, 1493
TscAI	CASTG	2 cut(s)	533, 1039
TseFI	GTSAC	3 cut(s)	869, 1806, 1885
Tsp45I	GTSAC	3 cut(s)	869, 1806, 1885
TspGWI	ACGGA	1 cut(s)	939
TspRI	CASTG	2 cut(s)	533, 1039
Vha464I	CTTAAG	1 cut(s)	692
VpaK11BI	GGWCC	6 cut(s)	175, 1132, 1235, 1355, 1514, 1580
XagI	CCTNNNNNAGG	1 cut(s)	1434
XapI	RAATTY	3 cut(s)	308, 1066, 1288
XceI	RCATGY	2 cut(s)	241, 1901
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1574
XmaJI	CCTAGG	1 cut(s)	1697
XmiI	GTMKAC	3 cut(s)	47, 1008, 1451
XmnI	GAANNNNTTC	1 cut(s)	486
XspI	CTAG	7 cut(s)	42, 86, 401, 851, 1698, 1739, 1881
Zsp2I	ATGCAT	1 cut(s)	1648

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.