MD13G1125400.v1.1

Hydroxyproline-rich glycoprotein family protein

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr13
Physical Location & Seq
Forward (+)
9296185 .. 9301095
4911 bp
Loading structure...
UTR
Exon/CDS
Intron
MD13G1125400.v1.1.491

Sequence Viewer

Length: 1923 bp
ATGAAAACCTCTCTCAGAAGGCTGCGAGGTTTCGCACTTCACAAGCACGATGCCAAGGACCGGAGAGATCTCCGGCCGCTGCCGCAATTGGACGAGCTCGCCCAGGCCTCTCAGGATATGCACGATATGAGGGACTGCTATGACAGCTTACTTTCTGCCGCTGCCGCCACGGCTAATAGCGCTTATGAGTTTTCGGAGTCGCTGCGGGAAATGGGTTCTTGTCTTCTTCAGAAAACTGCACTAAATGATGATGAAGAAAGTGGTTCAGTTCTGCTGAAGCTAGGGAAACTGCAATATGAACTCCATAAACTCGTTGATAGCTATCGCTCTCATATATTCCAGACAATTGCAGTTCCATCAGAATCTCTTCTGAATGAACTTCAAACAGTTGAGGAGATGAAGCAACAATGTGATGAAAAAAGAGATGTATATGATTTTATGATAAAGAGATACAAAGAAAAAGGGAGGTCAAGAGGTGGTGGGAAGAGAGAGAGCTTTTCTATGCAGCAAATACAAGTGGCTCGCGATGAATATGATGAGGAGGCTACATTATTTGTTTTCCGGTTGAAATCTCTGAAGCAAGGACAATCTCGTAGTCTTCTCACGCAGGCAGCTCGCCATCATGCTGCTCAGTTGTCCTTCTTCAAGAAAGCACTTAGGTCTGTTGAGTCAGTAGAGCCACATGTGAAACTGGTAACTGAGAAGAAGCATATTGATTACGAGTTCCATGGGCTACATGATGAAGGGGACGGTGACAACGATGACGATGAGAATGATGACGATGATAGCATCGATGTGAATGATGATGGAGAATTGAGCTTTGACTTTGGACAACAGGACCAAGATCAAGATGTTTCTACTTCAAGAAACTCAATGGAGTTGGATCAGGCAGACATTACCTTTCCCAGATTACCGCAGGTGGAGGCTCTCAAGGACAGACTCCGCAGGAATTCGTTTTCATTTAAGGGTAGAGGAGTCAGCCAATCAGCTCCGCTGTTTCCTGAAACTAATTTGGGTCGATCCGAAAAAATGAGACATAGGCAGACATCATTTTCACGGAAGTTCCACTCATATGTACTACCGACACCAATTGATAAGAGTCGAGTTTCTACTAGATCAGGTATGCCAGTGCCCACTGTACAGACAACTTTAAGTGAGCGAACACAGAATTTGTGGCATTCATCACCCTTGAAACCGGGGAATGAAAGGACGGGAGAGAAGAAAATTGCTGGAACCAATTTTATAGATGTGCAGTCAGTACTCAAAGAGAGCAACAATAATATTGCACCGCATCGATTACCCCCTCCTCTCACAGGTCAGGTTTTGTTTTCGGGGCAGGATCCACTGGTTGCTTCTGACTTTAAAAAAATAAAAAGGCAAGCATTCTCAGGTCCATTGACAAGTAAGCCTTGGGCTTCTAAACCTGTCCCCTCGGACCATCACCCAATGTTTTCTGGACCTATTTTGCGAAATCCAGGGTCTCAACCTCTGTCAACTTCACCTAAAGTATCTCCAAATGCTTCGCCTACTTTTATGTCCTCTCCTAAAATAAGCGAACTTCATGAGCTTCCTAGGCCACCTGTAGCCTCCAAGGCTTCAAGACCTGCGGGTCTAGTTGGTCATTCTGCTCCCTTGGTGCCCAGACTACAAATGCAATCTGCAACAAATAAACCAGTGGTGTCACCGAAAGCAGCTCCTCTGCCCAAACCTCCTCTGGTCCTTGCTCGTAGTTACTCTATACCTACAAGGGATCATACAGCGATGGAGTTCCATGTAACTGAACCACAGGAAGCTTCCCCCATTCCTGAAGTGCCAGACAATTCACCTCCTTTGACTCCAATAACCTTACCTAACACAGCCAAGCCACCGTCACCCAGCTCTGAGATTGTCACGCGGGCTGTTCAATTCAGAGGCGGAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

641

Amino Acids

71.44

Weight (kDa)

7.37

Isoelectric Point (pI)

60.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 907
AasI GACNNNNNNGTC 1 cut(s) 1608
Acc36I ACCTGC 2 cut(s) 907, 1612
AccB1I GGYRCC 1 cut(s) 1636
AccII CGCG 2 cut(s) 525, 1894
AclWI GGATC 5 cut(s) 891, 1014, 1334, 1347, 1758
AcoI YGGCCR 1 cut(s) 74
AcsI RAATTY 2 cut(s) 949, 1168
AcuI CTGAAG 4 cut(s) 212, 296, 596, 1827
AfaI GTAC 3 cut(s) 1077, 1140, 1260
AfeI AGCGCT 1 cut(s) 181
AfiI CCNNNNNNNGG 2 cut(s) 60, 1313
AflIII ACRYGT 1 cut(s) 682
AgsI TTSAA 7 cut(s) 383, 568, 646, 864, 1192, 1599, 1904
AjnI CCWGG 2 cut(s) 102, 1474
Alw21I GWGCWC 1 cut(s) 99
Alw26I GTCTC 2 cut(s) 1027, 1485
AlwI GGATC 5 cut(s) 891, 1014, 1334, 1347, 1758
Aor51HI AGCGCT 1 cut(s) 181
AoxI GGCC 3 cut(s) 74, 105, 1574
ApeKI GCWGC 8 cut(s) 22, 79, 161, 202, 505, 611, 626, 1691
ApoI RAATTY 2 cut(s) 949, 1168
Asp700I GAANNNNTTC 1 cut(s) 366
AspA2I CCTAGG 1 cut(s) 1571
AspLEI GCGC 1 cut(s) 182
AspS9I GGNCC 6 cut(s) 58, 838, 1391, 1435, 1457, 1717
AsuC2I CCSGG 1 cut(s) 1197
AsuHPI GGTGA 7 cut(s) 764, 1176, 1433, 1491, 1674, 1815, 1863
AvaII GGWCC 6 cut(s) 58, 838, 1391, 1435, 1457, 1717
AvrII CCTAGG 1 cut(s) 1571
BaeGI GKGCMC 2 cut(s) 1134, 1641
BamHI GGATCC 1 cut(s) 1339
BanI GGYRCC 1 cut(s) 1636
BanII GRGCYC 1 cut(s) 99
BbsI GAAGAC 2 cut(s) 215, 590
Bbv12I GWGCWC 1 cut(s) 99
BbvI GCAGC 8 cut(s) 9, 66, 148, 189, 517, 613, 623, 1703
BccI CCATC 5 cut(s) 364, 627, 800, 1446, 1756
BceAI ACGGC 1 cut(s) 186
BcgI CGANNNNNNTGC 2 cut(s) 596, 630
BciT130I CCWGG 2 cut(s) 104, 1476
BcnI CCSGG 1 cut(s) 1197
BcoDI GTCTC 2 cut(s) 1027, 1485
BfaI CTAG 4 cut(s) 281, 1113, 1572, 1613
BfmI CTRYAG 1 cut(s) 1581
BfoI RGCGCY 1 cut(s) 183
BfuAI ACCTGC 2 cut(s) 907, 1612
BglI GCCNNNNNGGC 2 cut(s) 170, 1592
BglII AGATCT 1 cut(s) 67
BlnI CCTAGG 1 cut(s) 1571
BmcAI AGTACT 1 cut(s) 1260
Bme1390I CCNGG 3 cut(s) 104, 1197, 1476
Bme18I GGWCC 6 cut(s) 58, 838, 1391, 1435, 1457, 1717
BmgT120I GGNCC 6 cut(s) 58, 838, 1391, 1435, 1457, 1717
BmiI GGNNCC 3 cut(s) 1234, 1341, 1638
BmrFI CCNGG 3 cut(s) 104, 1197, 1476
BmsI GCATC 3 cut(s) 40, 798, 1300
BpiI GAAGAC 2 cut(s) 215, 590
BpuEI CTTGAG 1 cut(s) 914
BpuMI CCSGG 1 cut(s) 1197
Bsa29I ATCGAT 2 cut(s) 792, 1294
BsaBI GATNNNNATC 1 cut(s) 321
BsaI GGTCTC 1 cut(s) 1485
BsaWI WCCGGW 2 cut(s) 60, 561
Bsc4I CCNNNNNNNGG 2 cut(s) 60, 1313
Bse1I ACTGG 4 cut(s) 696, 1127, 1350, 1673
Bse8I GATNNNNATC 1 cut(s) 321
BseBI CCWGG 2 cut(s) 104, 1476
BseCI ATCGAT 2 cut(s) 792, 1294
BseJI GATNNNNATC 1 cut(s) 321
BseLI CCNNNNNNNGG 2 cut(s) 60, 1313
BseMII CTCAG 6 cut(s) 28, 125, 644, 690, 1401, 1872
BseNI ACTGG 4 cut(s) 696, 1127, 1350, 1673
BseRI GAGGAG 6 cut(s) 407, 554, 987, 1296, 1686, 1701
BseSI GKGCMC 2 cut(s) 1134, 1641
BseX3I CGGCCG 1 cut(s) 74
BseXI GCAGC 8 cut(s) 9, 66, 148, 189, 517, 613, 623, 1703
BseYI CCCAGC 1 cut(s) 1874
BsgI GTGCAG 2 cut(s) 222, 1271
Bsh1236I CGCG 2 cut(s) 525, 1894
Bsh1285I CGRYCG 1 cut(s) 77
BshFI GGCC 3 cut(s) 76, 107, 1576
BshNI GGYRCC 1 cut(s) 1636
BshVI ATCGAT 2 cut(s) 792, 1294
BsiEI CGRYCG 1 cut(s) 77
BsiHKAI GWGCWC 1 cut(s) 99
BsiSI CCGG 4 cut(s) 61, 73, 562, 1196
BslFI GGGAC 3 cut(s) 146, 761, 1412
BslI CCNNNNNNNGG 2 cut(s) 60, 1313
BsmAI GTCTC 2 cut(s) 1027, 1485
BsmFI GGGAC 3 cut(s) 146, 761, 1412
BsmI GAATGC 2 cut(s) 1177, 1382
BsnI GGCC 3 cut(s) 76, 107, 1576
Bso31I GGTCTC 1 cut(s) 1485
Bsp1286I GDGCHC 3 cut(s) 99, 1134, 1641
Bsp1407I TGTACA 1 cut(s) 1138
Bsp143I GATC 7 cut(s) 67, 844, 883, 1019, 1115, 1339, 1750
Bsp19I CCATGG 1 cut(s) 727
Bsp68I TCGCGA 1 cut(s) 525
BspANI GGCC 3 cut(s) 76, 107, 1576
BspCNI CTCAG 6 cut(s) 27, 124, 643, 691, 1400, 1873
BspDI ATCGAT 2 cut(s) 792, 1294
BspFNI CGCG 2 cut(s) 525, 1894
BspHI TCATGA 1 cut(s) 1561
BspLI GGNNCC 3 cut(s) 1234, 1341, 1638
BspMI ACCTGC 2 cut(s) 907, 1612
BspPI GGATC 5 cut(s) 891, 1014, 1334, 1347, 1758
BspT107I GGYRCC 1 cut(s) 1636
BspTNI GGTCTC 1 cut(s) 1485
BsrGI TGTACA 1 cut(s) 1138
BsrI ACTGG 4 cut(s) 696, 1127, 1350, 1673
BssMI GATC 7 cut(s) 67, 844, 883, 1019, 1115, 1339, 1750
BssT1I CCWWGG 6 cut(s) 54, 727, 1409, 1571, 1590, 1632
Bst2UI CCWGG 2 cut(s) 104, 1476
Bst4CI ACNGT 4 cut(s) 388, 752, 1138, 1869
Bst6I CTCTTC 2 cut(s) 372, 479
BstAUI TGTACA 1 cut(s) 1138
BstC8I GCNNGC 6 cut(s) 99, 523, 609, 616, 1380, 1896
BstDEI CTNAG 7 cut(s) 14, 111, 630, 656, 699, 1387, 1881
BstDSI CCRYGG 2 cut(s) 168, 727
BstENI CCTNNNNNAGG 1 cut(s) 1311
BstFNI CGCG 2 cut(s) 525, 1894
BstH2I RGCGCY 1 cut(s) 183
BstHHI GCGC 1 cut(s) 182
BstKTI GATC 7 cut(s) 70, 847, 886, 1022, 1118, 1342, 1753
BstMAI GTCTC 2 cut(s) 1027, 1485
BstMBI GATC 7 cut(s) 67, 844, 883, 1019, 1115, 1339, 1750
BstMCI CGRYCG 1 cut(s) 77
BstMWI GCNNNNNNNGC 7 cut(s) 82, 144, 164, 170, 179, 1573, 1592
BstNI CCWGG 2 cut(s) 104, 1476
BstNSI RCATGY 1 cut(s) 686
BstSCI CCNGG 3 cut(s) 102, 1195, 1474
BstSFI CTRYAG 1 cut(s) 1581
BstSLI GKGCMC 2 cut(s) 1134, 1641
BstUI CGCG 2 cut(s) 525, 1894
BstV1I GCAGC 8 cut(s) 9, 66, 148, 189, 517, 613, 623, 1703
BstV2I GAAGAC 2 cut(s) 215, 590
BstX2I RGATCY 2 cut(s) 67, 1339
BstYI RGATCY 2 cut(s) 67, 1339
BstZI CGGCCG 1 cut(s) 74
Bsu15I ATCGAT 2 cut(s) 792, 1294
BsuRI GGCC 3 cut(s) 76, 107, 1576
BsuTUI ATCGAT 2 cut(s) 792, 1294
BtgI CCRYGG 2 cut(s) 168, 727
BtgZI GCGATG 2 cut(s) 540, 1775
BtsIMutI CAGTG 4 cut(s) 1134, 1134, 1343, 1680
BtuMI TCGCGA 1 cut(s) 525
BveI ACCTGC 2 cut(s) 907, 1612
Cac8I GCNNGC 6 cut(s) 99, 523, 609, 616, 1380, 1896
CciI TCATGA 1 cut(s) 1561
CfoI GCGC 1 cut(s) 182
Cfr13I GGNCC 6 cut(s) 58, 838, 1391, 1435, 1457, 1717
ClaI ATCGAT 2 cut(s) 792, 1294
Csp6I GTAC 3 cut(s) 1076, 1139, 1259
CviAII CATG 6 cut(s) 623, 683, 728, 737, 1562, 1772
CviQI GTAC 3 cut(s) 1076, 1139, 1259
DdeI CTNAG 7 cut(s) 14, 111, 630, 656, 699, 1387, 1881
DpnI GATC 7 cut(s) 69, 846, 885, 1021, 1117, 1341, 1752
DpnII GATC 7 cut(s) 67, 844, 883, 1019, 1115, 1339, 1750
DraI TTTAAA 1 cut(s) 1363
DrdI GACNNNNNNGTC 1 cut(s) 1608
DseDI GACNNNNNNGTC 1 cut(s) 1608
EaeI YGGCCR 1 cut(s) 74
EagI CGGCCG 1 cut(s) 74
Eam1104I CTCTTC 2 cut(s) 372, 479
EarI CTCTTC 2 cut(s) 372, 479
Ecl136II GAGCTC 1 cut(s) 97
EclXI CGGCCG 1 cut(s) 74
Eco130I CCWWGG 6 cut(s) 54, 727, 1409, 1571, 1590, 1632
Eco147I AGGCCT 1 cut(s) 107
Eco24I GRGCYC 1 cut(s) 99
Eco31I GGTCTC 1 cut(s) 1485
Eco47I GGWCC 6 cut(s) 58, 838, 1391, 1435, 1457, 1717
Eco47III AGCGCT 1 cut(s) 181
Eco52I CGGCCG 1 cut(s) 74
Eco53kI GAGCTC 1 cut(s) 97
Eco57I CTGAAG 4 cut(s) 212, 296, 596, 1827
EcoICRI GAGCTC 1 cut(s) 97
EcoNI CCTNNNNNAGG 1 cut(s) 1311
EcoRI GAATTC 1 cut(s) 949
EcoRII CCWGG 2 cut(s) 102, 1474
EcoT14I CCWWGG 6 cut(s) 54, 727, 1409, 1571, 1590, 1632
EcoT38I GRGCYC 1 cut(s) 99
ErhI CCWWGG 6 cut(s) 54, 727, 1409, 1571, 1590, 1632
FaeI CATG 6 cut(s) 626, 686, 731, 740, 1565, 1775
FalI AAGNNNNNCTT 2 cut(s) 1393, 1425
FaqI GGGAC 3 cut(s) 146, 761, 1412
FatI CATG 6 cut(s) 622, 682, 727, 736, 1561, 1771
FauI CCCGC 3 cut(s) 198, 1600, 1887
FauNDI CATATG 1 cut(s) 1072
FriOI GRGCYC 1 cut(s) 99
FspBI CTAG 4 cut(s) 281, 1113, 1572, 1613
GlaI GCGC 1 cut(s) 181
GsaI CCCAGC 1 cut(s) 1878
HaeII RGCGCY 1 cut(s) 183
HaeIII GGCC 3 cut(s) 76, 107, 1576
HapII CCGG 4 cut(s) 61, 73, 562, 1196
HhaI GCGC 1 cut(s) 182
Hin1II CATG 6 cut(s) 626, 686, 731, 740, 1565, 1775
Hin6I GCGC 1 cut(s) 180
HinP1I GCGC 1 cut(s) 180
HincII GTYRAC 1 cut(s) 1494
HindII GTYRAC 1 cut(s) 1494
HindIII AAGCTT 1 cut(s) 1791
HinfI GANTC 7 cut(s) 197, 362, 668, 939, 975, 1099, 1834
HpaII CCGG 4 cut(s) 61, 73, 562, 1196
HphI GGTGA 7 cut(s) 764, 1176, 1433, 1491, 1674, 1815, 1863
Hpy166II GTNNAC 1 cut(s) 1494
Hpy8I GTNNAC 1 cut(s) 1494
HpyAV CCTTC 3 cut(s) 12, 649, 737
HpyCH4III ACNGT 4 cut(s) 388, 752, 1138, 1869
HpyCH4V TGCA 9 cut(s) 121, 239, 292, 350, 505, 1252, 1286, 1654, 1661
HpyF10VI GCNNNNNNNGC 7 cut(s) 82, 144, 164, 170, 179, 1573, 1592
HpyF3I CTNAG 7 cut(s) 14, 111, 630, 656, 699, 1387, 1881
Hsp92II CATG 6 cut(s) 626, 686, 731, 740, 1565, 1775
HspAI GCGC 1 cut(s) 180
Kzo9I GATC 7 cut(s) 67, 844, 883, 1019, 1115, 1339, 1750
LmnI GCTCC 3 cut(s) 994, 1633, 1699
Lsp1109I GCAGC 8 cut(s) 9, 66, 148, 189, 517, 613, 623, 1703
LweI GCATC 3 cut(s) 40, 798, 1300
MaeI CTAG 4 cut(s) 281, 1113, 1572, 1613
MaeIII GTNAC 7 cut(s) 694, 752, 1680, 1730, 1774, 1869, 1888
MalI GATC 7 cut(s) 69, 846, 885, 1021, 1117, 1341, 1752
MboI GATC 7 cut(s) 67, 844, 883, 1019, 1115, 1339, 1750
MboII GAAGA 9 cut(s) 215, 218, 266, 359, 496, 590, 634, 715, 1231
MfeI CAATTG 3 cut(s) 86, 345, 1089
MflI RGATCY 2 cut(s) 67, 1339
MhlI GDGCHC 3 cut(s) 99, 1134, 1641
MlyI GAGTC 6 cut(s) 206, 677, 933, 984, 1108, 1828
MmeI TCCRAC 1 cut(s) 861
MroXI GAANNNNTTC 1 cut(s) 366
MseI TTAA 3 cut(s) 963, 1151, 1362
MslI CAYNNNNRTG 2 cut(s) 794, 1071
MspA1I CMGCKG 3 cut(s) 79, 161, 994
MspI CCGG 4 cut(s) 61, 73, 562, 1196
MspR9I CCNGG 3 cut(s) 104, 1197, 1476
MunI CAATTG 3 cut(s) 86, 345, 1089
Mva1269I GAATGC 2 cut(s) 1177, 1382
MvaI CCWGG 2 cut(s) 104, 1476
MvnI CGCG 2 cut(s) 525, 1894
MwoI GCNNNNNNNGC 7 cut(s) 82, 144, 164, 170, 179, 1573, 1592
NciI CCSGG 1 cut(s) 1197
NcoI CCATGG 1 cut(s) 727
NdeI CATATG 1 cut(s) 1072
NdeII GATC 7 cut(s) 67, 844, 883, 1019, 1115, 1339, 1750
NlaIII CATG 6 cut(s) 626, 686, 731, 740, 1565, 1775
NlaIV GGNNCC 3 cut(s) 1234, 1341, 1638
NmuCI GTSAC 4 cut(s) 752, 1680, 1869, 1888
NruI TCGCGA 1 cut(s) 525
NspI RCATGY 1 cut(s) 686
PagI TCATGA 1 cut(s) 1561
PaqCI CACCTGC 1 cut(s) 907
PceI AGGCCT 1 cut(s) 107
PciI ACATGT 1 cut(s) 682
PcsI WCGNNNNNNNCGW 1 cut(s) 756
PctI GAATGC 2 cut(s) 1177, 1382
PdmI GAANNNNTTC 1 cut(s) 366
PfeI GAWTC 1 cut(s) 362
PleI GAGTC 6 cut(s) 205, 676, 933, 983, 1107, 1828
PpsI GAGTC 6 cut(s) 205, 676, 933, 983, 1107, 1828
PscI ACATGT 1 cut(s) 682
Psp124BI GAGCTC 1 cut(s) 99
Psp6I CCWGG 2 cut(s) 102, 1474
PspFI CCCAGC 1 cut(s) 1874
PspGI CCWGG 2 cut(s) 102, 1474
PspN4I GGNNCC 3 cut(s) 1234, 1341, 1638
PspPI GGNCC 6 cut(s) 58, 838, 1391, 1435, 1457, 1717
PsuI RGATCY 2 cut(s) 67, 1339
RruI TCGCGA 1 cut(s) 525
RsaI GTAC 3 cut(s) 1077, 1140, 1260
RsaNI GTAC 3 cut(s) 1076, 1139, 1259
RseI CAYNNNNRTG 2 cut(s) 794, 1071
SacI GAGCTC 1 cut(s) 99
SaqAI TTAA 3 cut(s) 963, 1151, 1362
Sau3AI GATC 7 cut(s) 67, 844, 883, 1019, 1115, 1339, 1750
Sau96I GGNCC 6 cut(s) 58, 838, 1391, 1435, 1457, 1717
ScaI AGTACT 1 cut(s) 1260
SchI GAGTC 6 cut(s) 206, 677, 933, 984, 1108, 1828
ScrFI CCNGG 3 cut(s) 104, 1197, 1476
SduI GDGCHC 3 cut(s) 99, 1134, 1641
SfaNI GCATC 3 cut(s) 40, 798, 1300
SfcI CTRYAG 1 cut(s) 1581
SinI GGWCC 6 cut(s) 58, 838, 1391, 1435, 1457, 1717
SmiMI CAYNNNNRTG 2 cut(s) 794, 1071
SmlI CTYRAG 1 cut(s) 929
SmoI CTYRAG 1 cut(s) 929
SseBI AGGCCT 1 cut(s) 107
SspI AATATT 1 cut(s) 1282
SspMI CTAG 4 cut(s) 281, 1113, 1572, 1613
SstI GAGCTC 1 cut(s) 99
StuI AGGCCT 1 cut(s) 107
StyD4I CCNGG 3 cut(s) 102, 1195, 1474
StyI CCWWGG 6 cut(s) 54, 727, 1409, 1571, 1590, 1632
TaaI ACNGT 4 cut(s) 388, 752, 1138, 1869
TaqI TCGA 4 cut(s) 792, 1018, 1102, 1294
TatI WGTACW 3 cut(s) 1075, 1138, 1258
TauI GCSGC 4 cut(s) 79, 85, 161, 167
TfiI GAWTC 1 cut(s) 362
Tru1I TTAA 3 cut(s) 963, 1151, 1362
Tru9I TTAA 3 cut(s) 963, 1151, 1362
TscAI CASTG 4 cut(s) 1134, 1141, 1350, 1680
TseFI GTSAC 4 cut(s) 752, 1680, 1869, 1888
TseI GCWGC 8 cut(s) 22, 79, 161, 202, 505, 611, 626, 1691
Tsp45I GTSAC 4 cut(s) 752, 1680, 1869, 1888
TspGWI ACGGA 1 cut(s) 1072
TspRI CASTG 4 cut(s) 1134, 1141, 1350, 1680
VpaK11BI GGWCC 6 cut(s) 58, 838, 1391, 1435, 1457, 1717
XagI CCTNNNNNAGG 1 cut(s) 1311
XapI RAATTY 2 cut(s) 949, 1168
XceI RCATGY 1 cut(s) 686
XcmI CCANNNNNNNNNTGG 1 cut(s) 1711
XmaJI CCTAGG 1 cut(s) 1571
XmnI GAANNNNTTC 1 cut(s) 366
XspI CTAG 4 cut(s) 281, 1113, 1572, 1613
ZrmI AGTACT 1 cut(s) 1260
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.