Rroxscaffold_2G00076680

protein At2g33490-like isoform

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0001635
Physical Location & Seq
Reverse (-)
426815 .. 434576
7762 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00076680.1

Sequence Viewer

Length: 2988 bp
ATGAAGTCGTCTTTTGACAAGCTTCGGAGATTCGAACTGTACAAGAGCGGTTCTAAAGATAAGAGGAACTTTCAACCCTCGGCTCACGTCGATGAGCTCGCTCAGGCTTCTCAGGACATGCAAGATATGAGAAATTGCTATGATAGCTTACTTTCTGCAGCTGCTGCTACAGCCAACAGCGCCTATGAATTCTCCGAATCACTGCGGGAAATGGGTTCTTGTCTGCAGGAGAAAACTGCATTACATCATGATGAACGAGGCGGTAGAGTTTTTCTGATGTTGGGGAAAGTGCAGTTTGAACTTCAAAAACTTGTTGATTCCTATCGATCTCATATAGTTTCGACAGTCACAAACCCATCAGAGTCTCTTCTCAATGAACTTCGAACAGTTGAGGATTTTTTAGTGTCTGGTGGATCCACACCTGCACCAAAACCTTGTTTGACTTGCATAAGCCACCATTTAACTTGGTGGGATCTTCCAGGCTTTAAAAGTCGAGGAATGCCTAATGCGCCCCTTTTCACCTTAGAGTTGTTGCCTTCCTGGAGGTCCCAGTTCTCTGCACTTGCTTATTATTTGTTCCCTTCTGTTCATTGGCTTGTATATGAATACATGGTAGCACAACAGAAAGAAAAAGGGAGATCAAAACGTGGGAAGGGCGAAAGCTTTACTTTGCAGCAACTGCAAGTAGCTCGTGAGGAATATGATGAGGAAGCTACACTGTGTGTTTTCCGGTTGAAGTCCCTGAAGCAAGGGCAAGCCCGAAGTCTTCTAACACAAGCAGCTCGCCACCATGCTGCTCAGTTGAACTTCTTCCGGAAAGGACTTAAGTCACTTGAGGCTGTCGAGCCACATGTTAGGTTGGTTACAGAGGAGCAACATATTGAATACCAATTTAGTGGACTTGAAGACGATGGTGAGGATGATGGTGCAGATCATGGTGAGAATAGCAACGATTCTATTGAAGATGGAGAATTGAGTTTTGACTATAGACCAAGTAAGCAGGGAATGGAAGTCTCTGCATCAAGGAATTCAATGGAGGCTGATGAAGTGGGCCATTTGTCTCCTCAAGCTTCAACACTGGAATATCCAGATATCAATCTTGATCAAGGTGAACTCAAGTTTCCGAGTAGAGAACCAAGAATAGGCGGCAGCTACTCAGCCCCAATAGTTTCTGCAGATCCGAAGTTTGATCCCGCTGAGAGAGCTAGACAATTGCAACTGTCAGCTACACGGAGGCCTAATGCATATGTGCTGCCTACACCTGATTCAAAGGGTTTAGTTTCTTCAAGGACAAGTAGTACGGTTCCAGGCGTGAGGTCAGGTGGACGCATCCATAACTTATCGTACTCTTCCCCATTAGACGCGAAGCACGATAAGTATTCTGGTGATGATAATGTGTCAGGAGCTAATTTCTCAAAAGCACAGTCGGTAGTCAAAGAGAGCCATAGTACTAATACATCGATGCAACTGCCTCCTCCTCCTCTGGCAGACGGACTGGCACAACATCAGCATAAAAGACAAGCTTTCTCTGGCCCACTAACTAGTAAGCCATCATCAACTAAGCCTGCGTTCTCTGCTAGTGGTCCCATTGTATCTAGTGAACCACCTCAACTAGTTTCTGGTATGCTTCCTCGTTTACCAAATCCTCAGCCTTCTTCATCTCCAAAAGTATCCCCAAGTGCTTCACCTCCCCTTGCTTCTTCACCCAAGATAAGTGAGCTTCACGAGCTTCCTAGACCCCCAGGTAGTTCAGTTGTCAAGCCAACAAAATCTTTTGGATTGGTTGGCCACTCTGCTCCACTGTTTTTCAAAAATCAAGAACCTCACGTTCATAATAAAATCCCTTCAGCGCCAACAAATTTGGCATCTCCACTTCCAATTCCACCATTGATTATTCCTAGAAGTTTCTCCATACCTTCGAGTAACCAAAGAGCAGTGACATTGCATGTATCTAGGCATTTGGAGTCTCCTCTAGTGCTATCAGAGTTGGGAGCCGATATCGATACAGTGAAGCAGTGTGATTTCCGTTTCCCCCCTGAGATTGTGTTGGGTTGCATTGTCTTAGGACTCTCCTCCCTTCCTCCTCTTGCTCTAGTCTCCACCTCCGCACTCCGCTCCTCCATTTTCACGTCTCGCCTTCCCACTCACAGTCGTTACCCACGGATGTCCTTCAGTCTCAGACCTCACTGCGCATTCCATCTCGTACCCGCTTCCGGAAACCTCTCGCCGCCTCCGATGGCACCACTTCCGGTCAGTTCAATCTCTTATGACTCTTCTATTCCATTCCCAGATGAAGTTATGGCCCACTCAACTAAGGTTGCTGTGGATGATCCCTCTCTTGCTGTGAAGAAGAAGGCAATGGATGTATCACCAGAACTCAAGGGAACTACCATATTCCTTGTGGGCATGAAGAGCTCCATAAAGACCAGTTTGGGGAAATTCCTCGCCAACGTGTTACGATACTATTACTTTGACAGTGATAGTTTGGTTGAGGAAGCTGCTGGCACTCAATCTGCCACCAAATCTTTAAGGGAGACTGACAAGAGTGGTTTCCAGGAGTCTGAGACTGAAGTGTTGAAGCAATTATCCTCCATGGGTCGGTTAGTGGTCTGTGCTGGAGATGGTGCAACTCAGAGTTCAACAAATCTGGCTCTTTTAAGACATGGGATCACGATATGGATTGACGTACCTTTAGACATTGTGGCCAGGGGTGTGGTCGAAGATCAAACTCAGCTCTCTGCATACAATCTATCTACTTCTGTATCCTATCCAGAGGTTTTGACTCACCTAAGTACTTCATATGAAGAGTTGAGAGGTGGATACGCAATAGCTGATGCAACCGTATCTCTTCAGCAAGTAGCTGGTAAGTTAGGTTATGATGAAATCGACGATGTAACCACCGAAGACATGGCTTTGGAGGTTCTCAAGGAGGTAGAGAAATTGACCAGAGTGAAGAAGATGATGGAAGCAGCAGCGAGACCTTTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BAR BAR_3

Protein Analysis

995

Amino Acids

108.81

Weight (kDa)

6.34

Isoelectric Point (pI)

51.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SKI PF01202 806 - 922 1.8e-22 Shikimate kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 430
Acc16I TGCGCA 1 cut(s) 2191
Acc36I ACCTGC 1 cut(s) 430
AccB1I GGYRCC 1 cut(s) 2239
AccBSI CCGCTC 2 cut(s) 48, 2115
AccII CGCG 1 cut(s) 1364
AccIII TCCGGA 2 cut(s) 813, 2213
AciI CCGC 9 cut(s) 48, 205, 261, 1146, 1194, 2106, 2113, 2208, 2228
AclWI GGATC 7 cut(s) 408, 421, 480, 1172, 1184, 2324, 2675
AcoI YGGCCR 2 cut(s) 1786, 2703
AcsI RAATTY 4 cut(s) 188, 1027, 1858, 2438
AcuI CTGAAG 5 cut(s) 764, 1830, 2155, 2589, 2834
AdeI CACNNNGTG 1 cut(s) 722
AfaI GTAC 7 cut(s) 41, 1300, 1346, 1450, 2205, 2688, 2794
AfiI CCNNNNNNNGG 4 cut(s) 1142, 2213, 2433, 2598
AflII CTTAAG 1 cut(s) 824
AflIII ACRYGT 2 cut(s) 850, 2451
AhlI ACTAGT 2 cut(s) 1541, 1612
AjiI CACGTC 2 cut(s) 88, 2130
AjnI CCWGG 6 cut(s) 478, 539, 1306, 1741, 2553, 2705
Alw21I GWGCWC 2 cut(s) 99, 2417
AlwI GGATC 7 cut(s) 408, 421, 480, 1172, 1184, 2324, 2675
AlwNI CAGNNNCTG 2 cut(s) 164, 679
Aor13HI TCCGGA 2 cut(s) 813, 2213
AoxI GGCC 6 cut(s) 1051, 1235, 1531, 1786, 2301, 2703
ApoI RAATTY 4 cut(s) 188, 1027, 1858, 2438
ArsI GACNNNNNNTTYG 2 cut(s) 1409, 1441
Asp700I GAANNNNTTC 1 cut(s) 809
AspLEI GCGC 4 cut(s) 182, 511, 1852, 2192
AspS9I GGNCC 5 cut(s) 546, 1051, 1532, 1583, 2302
AsuHPI GGTGA 9 cut(s) 511, 926, 950, 1121, 1397, 1677, 1695, 2361, 2777
AsuII TTCGAA 2 cut(s) 33, 382
AvaII GGWCC 2 cut(s) 546, 1583
BaeI ACNNNNGTAYC 2 cut(s) 2745, 2778
BalI TGGCCA 2 cut(s) 1788, 2705
BamHI GGATCC 1 cut(s) 413
BanI GGYRCC 1 cut(s) 2239
BanII GRGCYC 2 cut(s) 99, 2417
BauI CACGAG 2 cut(s) 690, 1724
BbsI GAAGAC 3 cut(s) 758, 912, 2910
Bbv12I GWGCWC 2 cut(s) 99, 2417
BbvCI CCTCAGC 1 cut(s) 1647
BccI CCATC 9 cut(s) 364, 905, 917, 959, 1558, 2205, 2230, 2615, 2956
BcgI CGANNNNNNTGC 4 cut(s) 671, 705, 1450, 1484
BciT130I CCWGG 6 cut(s) 480, 541, 1308, 1743, 2555, 2707
BciVI GTATCC 3 cut(s) 1681, 2773, 2813
BclI TGATCA 1 cut(s) 1102
BcuI ACTAGT 2 cut(s) 1541, 1612
BfmI CTRYAG 5 cut(s) 156, 168, 224, 985, 1173
BfoI RGCGCY 2 cut(s) 183, 1853
BfrI CTTAAG 1 cut(s) 824
BfuAI ACCTGC 1 cut(s) 430
BfuI GTATCC 3 cut(s) 1681, 2773, 2813
BmcAI AGTACT 2 cut(s) 1450, 2794
Bme1390I CCNGG 6 cut(s) 480, 541, 1308, 1743, 2555, 2707
Bme18I GGWCC 2 cut(s) 546, 1583
BmgBI CACGTC 2 cut(s) 88, 2130
BmgT120I GGNCC 5 cut(s) 546, 1051, 1532, 1583, 2302
BmiI GGNNCC 6 cut(s) 415, 548, 1305, 1585, 1993, 2241
BmrFI CCNGG 6 cut(s) 480, 541, 1308, 1743, 2555, 2707
BmrI ACTGGG 1 cut(s) 544
BmsI GCATC 5 cut(s) 1028, 1338, 1452, 1874, 2824
BmuI ACTGGG 1 cut(s) 544
BoxI GACNNNNGTC 1 cut(s) 826
BpiI GAAGAC 3 cut(s) 758, 912, 2910
BpmI CTGGAG 2 cut(s) 562, 2637
Bpu10I CCTNAGC 2 cut(s) 102, 1647
Bpu14I TTCGAA 2 cut(s) 33, 382
BpuEI CTTGAG 5 cut(s) 854, 1050, 1100, 2363, 2909
Bsa29I ATCGAT 3 cut(s) 325, 1460, 2001
BsaBI GATNNNNATC 2 cut(s) 321, 1095
BsaI GGTCTC 1 cut(s) 2971
BsaJI CCNNGG 5 cut(s) 78, 1741, 2159, 2592, 2706
BsaWI WCCGGW 4 cut(s) 729, 813, 2213, 2248
Bsc4I CCNNNNNNNGG 4 cut(s) 1142, 2213, 2433, 2598
Bse1I ACTGG 4 cut(s) 550, 1083, 1500, 2427
Bse3DI GCAATG 2 cut(s) 1940, 2364
Bse8I GATNNNNATC 2 cut(s) 321, 1095
BseAI TCCGGA 2 cut(s) 813, 2213
BseBI CCWGG 6 cut(s) 480, 541, 1308, 1743, 2555, 2707
BseCI ATCGAT 3 cut(s) 325, 1460, 2001
BseDI CCNNGG 5 cut(s) 78, 1741, 2159, 2592, 2706
BseGI GGATG 5 cut(s) 925, 1329, 2169, 2332, 2368
BseJI GATNNNNATC 2 cut(s) 321, 1095
BseLI CCNNNNNNNGG 4 cut(s) 1142, 2213, 2433, 2598
BseMI GCAATG 2 cut(s) 1940, 2364
BseNI ACTGG 4 cut(s) 550, 1083, 1500, 2427
BseRI GAGGAG 9 cut(s) 884, 1053, 1464, 1467, 1470, 1959, 2062, 2073, 2107
BsgI GTGCAG 4 cut(s) 311, 408, 543, 948
Bsh1236I CGCG 1 cut(s) 1364
BshFI GGCC 6 cut(s) 1053, 1237, 1533, 1788, 2303, 2705
BshNI GGYRCC 1 cut(s) 2239
BshVI ATCGAT 3 cut(s) 325, 1460, 2001
BsiHKAI GWGCWC 2 cut(s) 99, 2417
BsiSI CCGG 4 cut(s) 730, 814, 2214, 2249
BslFI GGGAC 3 cut(s) 532, 724, 1569
BslI CCNNNNNNNGG 4 cut(s) 1142, 2213, 2433, 2598
BsmBI CGTCTC 1 cut(s) 2136
BsmFI GGGAC 3 cut(s) 532, 724, 1569
BsmI GAATGC 2 cut(s) 504, 2192
BsnI GGCC 6 cut(s) 1053, 1237, 1533, 1788, 2303, 2705
Bso31I GGTCTC 1 cut(s) 2971
Bsp119I TTCGAA 2 cut(s) 33, 382
Bsp1286I GDGCHC 2 cut(s) 99, 2417
Bsp13I TCCGGA 2 cut(s) 813, 2213
Bsp1407I TGTACA 1 cut(s) 39
Bsp19I CCATGG 1 cut(s) 2592
BspACI CCGC 9 cut(s) 48, 205, 261, 1146, 1194, 2106, 2113, 2208, 2228
BspANI GGCC 6 cut(s) 1053, 1237, 1533, 1788, 2303, 2705
BspDI ATCGAT 3 cut(s) 325, 1460, 2001
BspEI TCCGGA 2 cut(s) 813, 2213
BspFNI CGCG 1 cut(s) 1364
BspHI TCATGA 1 cut(s) 247
BspLI GGNNCC 6 cut(s) 415, 548, 1305, 1585, 1993, 2241
BspMAI CTGCAG 3 cut(s) 160, 228, 1177
BspMI ACCTGC 1 cut(s) 430
BspPI GGATC 7 cut(s) 408, 421, 480, 1172, 1184, 2324, 2675
BspQI GCTCTTC 1 cut(s) 2405
BspT104I TTCGAA 2 cut(s) 33, 382
BspT107I GGYRCC 1 cut(s) 2239
BspTI CTTAAG 1 cut(s) 824
BspTNI GGTCTC 1 cut(s) 2971
BsrBI CCGCTC 2 cut(s) 48, 2115
BsrDI GCAATG 2 cut(s) 1940, 2364
BsrGI TGTACA 1 cut(s) 39
BsrI ACTGG 4 cut(s) 550, 1083, 1500, 2427
BssECI CCNNGG 5 cut(s) 78, 1741, 2159, 2592, 2706
BssSI CACGAG 2 cut(s) 690, 1724
BssT1I CCWWGG 1 cut(s) 2592
Bst2BI CACGAG 2 cut(s) 690, 1724
Bst2UI CCWGG 6 cut(s) 480, 541, 1308, 1743, 2555, 2707
Bst6I CTCTTC 6 cut(s) 372, 1354, 2278, 2405, 2799, 2853
BstAFI CTTAAG 1 cut(s) 824
BstAPI GCANNNNNTGC 2 cut(s) 164, 679
BstAUI TGTACA 1 cut(s) 39
BstBI TTCGAA 2 cut(s) 33, 382
BstC8I GCNNGC 5 cut(s) 99, 756, 784, 1566, 2503
BstDSI CCRYGG 2 cut(s) 2159, 2592
BstF5I GGATG 5 cut(s) 925, 1329, 2169, 2332, 2368
BstFNI CGCG 1 cut(s) 1364
BstH2I RGCGCY 2 cut(s) 183, 1853
BstHHI GCGC 4 cut(s) 182, 511, 1852, 2192
BstNI CCWGG 6 cut(s) 480, 541, 1308, 1743, 2555, 2707
BstNSI RCATGY 3 cut(s) 121, 854, 1949
BstPAI GACNNNNGTC 1 cut(s) 826
BstSCI CCNGG 6 cut(s) 478, 539, 1306, 1741, 2553, 2705
BstSFI CTRYAG 5 cut(s) 156, 168, 224, 985, 1173
BstUI CGCG 1 cut(s) 1364
BstV2I GAAGAC 3 cut(s) 758, 912, 2910
BstX2I RGATCY 3 cut(s) 413, 472, 1177
BstXI CCANNNNNNTGG 2 cut(s) 896, 2713
BstYI RGATCY 3 cut(s) 413, 472, 1177
Bsu15I ATCGAT 3 cut(s) 325, 1460, 2001
BsuI GTATCC 3 cut(s) 1681, 2773, 2813
BsuRI GGCC 6 cut(s) 1053, 1237, 1533, 1788, 2303, 2705
BsuTUI ATCGAT 3 cut(s) 325, 1460, 2001
BtgI CCRYGG 2 cut(s) 2159, 2592
BtrI CACGTC 2 cut(s) 88, 2130
BtsCI GGATG 5 cut(s) 925, 1329, 2169, 2332, 2368
BtsI GCAGTG 4 cut(s) 200, 1941, 2021, 2185
BtsIMutI CAGTG 9 cut(s) 200, 716, 1076, 1799, 1941, 2013, 2021, 2185, 2482
BveI ACCTGC 1 cut(s) 430
Cac8I GCNNGC 5 cut(s) 99, 756, 784, 1566, 2503
CaiI CAGNNNCTG 2 cut(s) 164, 679
CciI TCATGA 1 cut(s) 247
CfoI GCGC 4 cut(s) 182, 511, 1852, 2192
Cfr13I GGNCC 5 cut(s) 546, 1051, 1532, 1583, 2302
ClaI ATCGAT 3 cut(s) 325, 1460, 2001
CseI GACGC 2 cut(s) 1335, 1370
Csp6I GTAC 7 cut(s) 40, 1299, 1345, 1449, 2204, 2687, 2793
CviQI GTAC 7 cut(s) 40, 1299, 1345, 1449, 2204, 2687, 2793
DraI TTTAAA 1 cut(s) 487
DraIII CACNNNGTG 1 cut(s) 722
EaeI YGGCCR 2 cut(s) 1786, 2703
Eam1104I CTCTTC 6 cut(s) 372, 1354, 2278, 2405, 2799, 2853
EarI CTCTTC 6 cut(s) 372, 1354, 2278, 2405, 2799, 2853
Ecl136II GAGCTC 2 cut(s) 97, 2415
Eco130I CCWWGG 1 cut(s) 2592
Eco147I AGGCCT 1 cut(s) 1237
Eco24I GRGCYC 2 cut(s) 99, 2417
Eco31I GGTCTC 1 cut(s) 2971
Eco32I GATATC 2 cut(s) 1093, 1999
Eco47I GGWCC 2 cut(s) 546, 1583
Eco53kI GAGCTC 2 cut(s) 97, 2415
Eco57I CTGAAG 5 cut(s) 764, 1830, 2155, 2589, 2834
EcoICRI GAGCTC 2 cut(s) 97, 2415
EcoO109I RGGNCCY 1 cut(s) 546
EcoRI GAATTC 2 cut(s) 188, 1027
EcoRII CCWGG 6 cut(s) 478, 539, 1306, 1741, 2553, 2705
EcoRV GATATC 2 cut(s) 1093, 1999
EcoT14I CCWWGG 1 cut(s) 2592
EcoT22I ATGCAT 1 cut(s) 1246
EcoT38I GRGCYC 2 cut(s) 99, 2417
ErhI CCWWGG 1 cut(s) 2592
Esp3I CGTCTC 1 cut(s) 2136
FalI AAGNNNNNCTT 6 cut(s) 53, 85, 652, 684, 1507, 1539
FaqI GGGAC 3 cut(s) 532, 724, 1569
FauI CCCGC 3 cut(s) 198, 1201, 2215
FauNDI CATATG 2 cut(s) 1246, 2800
FbaI TGATCA 1 cut(s) 1102
FokI GGATG 5 cut(s) 932, 1316, 2176, 2339, 2375
FriOI GRGCYC 2 cut(s) 99, 2417
FspI TGCGCA 1 cut(s) 2191
GlaI GCGC 4 cut(s) 181, 510, 1851, 2191
GsuI CTGGAG 2 cut(s) 562, 2637
HaeII RGCGCY 2 cut(s) 183, 1853
HaeIII GGCC 6 cut(s) 1053, 1237, 1533, 1788, 2303, 2705
HapII CCGG 4 cut(s) 730, 814, 2214, 2249
HgaI GACGC 2 cut(s) 1335, 1370
HhaI GCGC 4 cut(s) 182, 511, 1852, 2192
Hin6I GCGC 4 cut(s) 180, 509, 1850, 2190
HinP1I GCGC 4 cut(s) 180, 509, 1850, 2190
HindIII AAGCTT 4 cut(s) 20, 661, 1068, 1521
HpaII CCGG 4 cut(s) 730, 814, 2214, 2249
HphI GGTGA 9 cut(s) 511, 926, 950, 1121, 1397, 1677, 1695, 2361, 2777
Hpy166II GTNNAC 5 cut(s) 899, 1112, 1325, 1601, 1637
Hpy8I GTNNAC 5 cut(s) 899, 1112, 1325, 1601, 1637
Hpy99I CGWCG 2 cut(s) 92, 2891
HpyCH4IV ACGT 6 cut(s) 87, 646, 1827, 2129, 2451, 2685
HpySE526I ACGT 6 cut(s) 87, 646, 1827, 2129, 2451, 2685
HspAI GCGC 4 cut(s) 180, 509, 1850, 2190
Kpn2I TCCGGA 2 cut(s) 813, 2213
Ksp22I TGATCA 1 cut(s) 1102
LguI GCTCTTC 1 cut(s) 2405
LmnI GCTCC 6 cut(s) 871, 1403, 1801, 1991, 2120, 2420
LweI GCATC 5 cut(s) 1028, 1338, 1452, 1874, 2824
MaeII ACGT 6 cut(s) 87, 646, 1827, 2129, 2451, 2685
MaeIII GTNAC 8 cut(s) 346, 828, 862, 1922, 1936, 2153, 2454, 2893
MbiI CCGCTC 2 cut(s) 48, 2115
MfeI CAATTG 1 cut(s) 1211
MflI RGATCY 3 cut(s) 413, 472, 1177
MhlI GDGCHC 2 cut(s) 99, 2417
MlsI TGGCCA 2 cut(s) 1788, 2705
MluNI TGGCCA 2 cut(s) 1788, 2705
MlyI GAGTC 6 cut(s) 371, 1973, 2061, 2264, 2567, 2776
Mox20I TGGCCA 2 cut(s) 1788, 2705
Mph1103I ATGCAT 1 cut(s) 1246
MroI TCCGGA 2 cut(s) 813, 2213
MroXI GAANNNNTTC 1 cut(s) 809
MscI TGGCCA 2 cut(s) 1788, 2705
MseI TTAA 6 cut(s) 461, 486, 825, 2528, 2657, 2986
MslI CAYNNNNRTG 2 cut(s) 90, 249
Msp20I TGGCCA 2 cut(s) 1788, 2705
MspA1I CMGCKG 2 cut(s) 161, 1196
MspCI CTTAAG 1 cut(s) 824
MspI CCGG 4 cut(s) 730, 814, 2214, 2249
MspR9I CCNGG 6 cut(s) 480, 541, 1308, 1743, 2555, 2707
MunI CAATTG 1 cut(s) 1211
Mva1269I GAATGC 2 cut(s) 504, 2192
MvaI CCWGG 6 cut(s) 480, 541, 1308, 1743, 2555, 2707
MvnI CGCG 1 cut(s) 1364
NcoI CCATGG 1 cut(s) 2592
NdeI CATATG 2 cut(s) 1246, 2800
NlaIV GGNNCC 6 cut(s) 415, 548, 1305, 1585, 1993, 2241
NmeAIII GCCGAG 1 cut(s) 59
NmuCI GTSAC 3 cut(s) 346, 828, 1936
NsbI TGCGCA 1 cut(s) 2191
NsiI ATGCAT 1 cut(s) 1246
NspI RCATGY 3 cut(s) 121, 854, 1949
NspV TTCGAA 2 cut(s) 33, 382
PagI TCATGA 1 cut(s) 247
PaqCI CACCTGC 1 cut(s) 430
PceI AGGCCT 1 cut(s) 1237
PciI ACATGT 1 cut(s) 850
PciSI GCTCTTC 1 cut(s) 2405
PcsI WCGNNNNNNNCGW 2 cut(s) 1368, 2231
PctI GAATGC 2 cut(s) 504, 2192
PdmI GAANNNNTTC 1 cut(s) 809
PfeI GAWTC 5 cut(s) 30, 197, 317, 953, 1265
PfoI TCCNGGA 2 cut(s) 539, 2553
PleI GAGTC 6 cut(s) 370, 1972, 2061, 2264, 2566, 2776
PpsI GAGTC 6 cut(s) 370, 1972, 2061, 2264, 2566, 2776
PpuMI RGGWCCY 1 cut(s) 546
PscI ACATGT 1 cut(s) 850
PshAI GACNNNNGTC 1 cut(s) 826
Psp124BI GAGCTC 2 cut(s) 99, 2417
Psp5II RGGWCCY 1 cut(s) 546
Psp6I CCWGG 6 cut(s) 478, 539, 1306, 1741, 2553, 2705
PspGI CCWGG 6 cut(s) 478, 539, 1306, 1741, 2553, 2705
PspN4I GGNNCC 6 cut(s) 415, 548, 1305, 1585, 1993, 2241
PspPI GGNCC 5 cut(s) 546, 1051, 1532, 1583, 2302
PspPPI RGGWCCY 1 cut(s) 546
PstI CTGCAG 3 cut(s) 160, 228, 1177
PstNI CAGNNNCTG 2 cut(s) 164, 679
PsuI RGATCY 3 cut(s) 413, 472, 1177
PvuII CAGCTG 1 cut(s) 161
RsaI GTAC 7 cut(s) 41, 1300, 1346, 1450, 2205, 2688, 2794
RsaNI GTAC 7 cut(s) 40, 1299, 1345, 1449, 2204, 2687, 2793
RseI CAYNNNNRTG 2 cut(s) 90, 249
SacI GAGCTC 2 cut(s) 99, 2417
SapI GCTCTTC 1 cut(s) 2405
SaqAI TTAA 6 cut(s) 461, 486, 825, 2528, 2657, 2986
Sau96I GGNCC 5 cut(s) 546, 1051, 1532, 1583, 2302
ScaI AGTACT 2 cut(s) 1450, 2794
SchI GAGTC 6 cut(s) 371, 1973, 2061, 2264, 2567, 2776
ScrFI CCNGG 6 cut(s) 480, 541, 1308, 1743, 2555, 2707
SduI GDGCHC 2 cut(s) 99, 2417
SfaNI GCATC 5 cut(s) 1028, 1338, 1452, 1874, 2824
SfcI CTRYAG 5 cut(s) 156, 168, 224, 985, 1173
SfuI TTCGAA 2 cut(s) 33, 382
SinI GGWCC 2 cut(s) 546, 1583
SmiMI CAYNNNNRTG 2 cut(s) 90, 249
SmlI CTYRAG 6 cut(s) 824, 833, 1065, 1115, 2378, 2924
SmoI CTYRAG 6 cut(s) 824, 833, 1065, 1115, 2378, 2924
SpeI ACTAGT 2 cut(s) 1541, 1612
SseBI AGGCCT 1 cut(s) 1237
SsiI CCGC 9 cut(s) 48, 205, 261, 1146, 1194, 2106, 2113, 2208, 2228
SstI GAGCTC 2 cut(s) 99, 2417
StuI AGGCCT 1 cut(s) 1237
StyD4I CCNGG 6 cut(s) 478, 539, 1306, 1741, 2553, 2705
StyI CCWWGG 1 cut(s) 2592
TaiI ACGT 6 cut(s) 90, 649, 1830, 2132, 2454, 2688
TatI WGTACW 3 cut(s) 39, 1448, 2792
TauI GCSGC 2 cut(s) 1149, 2230
TfiI GAWTC 5 cut(s) 30, 197, 317, 953, 1265
Tru1I TTAA 6 cut(s) 461, 486, 825, 2528, 2657, 2986
Tru9I TTAA 6 cut(s) 461, 486, 825, 2528, 2657, 2986
TscAI CASTG 9 cut(s) 207, 723, 1083, 1806, 1941, 2013, 2021, 2192, 2482
TseFI GTSAC 3 cut(s) 346, 828, 1936
Tsp45I GTSAC 3 cut(s) 346, 828, 1936
TspGWI ACGGA 4 cut(s) 1246, 1506, 2015, 2176
TspRI CASTG 9 cut(s) 207, 723, 1083, 1806, 1941, 2013, 2021, 2192, 2482
Vha464I CTTAAG 1 cut(s) 824
VpaK11BI GGWCC 2 cut(s) 546, 1583
XapI RAATTY 4 cut(s) 188, 1027, 1858, 2438
XceI RCATGY 3 cut(s) 121, 854, 1949
XcmI CCANNNNNNNNNTGG 2 cut(s) 2398, 2905
XmnI GAANNNNTTC 1 cut(s) 809
ZrmI AGTACT 2 cut(s) 1450, 2794
Zsp2I ATGCAT 1 cut(s) 1246
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.