Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

SuperScaffold_111

Orthogroup ID

OG0001635

Physical Location & Seq

Genomic Coordinates Reverse (-)

320835 .. 325485

Gene Structure 4651 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom111g00450.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1998 bp

ATGAAGACCTCGCTCGGCATGTTTCGGAGATTCGAACTGCACAAAAACGATGCCAAAGATAAGAGAGACATTCAACCATTGGCTCAGGTCGATGAGCTCGCTCAGGCGGCCCAGGACATGCATGATATGAGAAGTTGCTATGATAGCTTACTCTCTGCAGCTGCCGCTACAGCAAACAGCGCATATGAATTCTCGGAGTCACTGCGTGAAATGGGTGCTTGTCTACTGGAAAAAACTGCATTGCATGATGATGAAGCGAGTGGTAGAGTATTTCTGATGCTAGGGAAGGTGCAGTATGAACTTCAAAAACTTGTTGATAGCTATCGCTCTCATATATTTTTGACAATTACAAACCCATCGGAGTCACTTCTCAATGAGCTTCGGACAGTTGAGGAAATGAAGCGACAATGTGACGAGAAAAGAGAAGTGTATGACTACATGGTGGCACAACAGAAAGAAAAAGGGAGGTCAAAACGTGGAAAGGGTGACGGTTTTACTTTGCAGCAATTGCAAGTAGCTCATGATGAATATGATGAGGAGGCGACATTGTGTGTCTTCCGATTGAAGTCTCTGAAGCAAGGACAGGCTCAAAGTCTTCTAACACAGGCAGCTCGTCATCATGCTGCTCAGTTGAATTTCTTCCGGAAAGGACTTAAATCACTTGAGGCTGTTGAGCCGCACGTTAGATTGGTTACAGAGGAGCATCATATTGAATACCAATTCAGTGGACTTGAAGATGATGGTGGGGATGATGTTGAGGATAATGGTGAAAATAGCTATGATTCTAATGAAGATGGAGAATTGAGTTTTAACTATATATCAAGCAAGCAGGGGATTGATGTCACCTCCGCATCAAGGAATTCAATGGAGCTCATTTCTCAGGACGATGAAGTGGGACTTTTGTCTCCTATAGCGACAAGAGTGGAATATGCAGATATAAATCTAGATAGAAACCAATGGGATATGAGGACCTCAAGTAGAGAACCCAGAATAGGCAGCCACTCAGCCCCAATTTTTGCAGAGAAGAAGTTTGATCCTGCTGAGAAAGCTAGACAACTGCAGGCAACAACAGCACGGAAGTCTAATACGTATGTACTGCCCACACCTATTGATCCAAAAGGTTTGGGTTCTTCAAGAACAAGCAGCGCGGTTCCAGGAACAGGGCCAAGTAGACGCAATCCAAACTTATGGCACTCTTCCCCATTGGTAGAGAAAGATCCTGGTGATGTGTTGAATGCATCTGGTACAAAAGCTCAGGTGGTACAAAAAGAGAGCAATGTCAATAGTACCTCCACCCAACTACCTCCTCCCCTGGAGGGACTTGCACTTCCACAGATTGATACGTTGAATGCATCTGATACAAAGAAGATCAAAAGATATGCTTTCTCCGGTCCAATACCTAGTAAGTCGGCATCATCAAAGCCTGTGTTATATGCCAGTGGTCCCATTGCATCAACTGAACTACCGCAACTAGTTTCCGGAATGCTGTCTCATTTACCAAATCCCCAACCTTCTTCATCTCCAAAGGTATCCCCATGTGCTTCACCTCCCCTTGTTTCTTCACCCAAGATAAGCGAGCTTCATGAGCTTCCTAGACCCCCCGGTTCATCATCTGCCAAGCCAACAAATCCCAGTTCATCAGCTGCCAAACCAGCAAAGTCCTCGGGATTTGTTGGTCACTCTGCTCCACTGGTTTCCAGAAATCAAGAACATAGCATGCCAAATAAAAACCCTTCAGTGGCATCAAATGCAGCATCTCCACTTCCAATTCCACCATTGATAGTTCCCCGAAGCTTCTCCATACCTTCAAGCAGTCAAAGAGCAATGGCATTGCATGTAGCAAGACATTTGGAGTCTCCTCAGGTTCCAGGCAAGGCTGAAGAAGTTGCTTCACCTCCATTGACGCCAATTTCCCTATCGAACGTCAAACCAGTATCAAATGTTTCTGAAGTGGCCTCTCACTCTAGTCCGATTCGAGTGCATGCAGGTGGGAGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BAR BAR_3

Protein Analysis

666

Amino Acids

72.27

Weight (kDa)

6.39

Isoelectric Point (pI)

55.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001635)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33490 AT2G33490 AT2G33490
fragaria_vesca	FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_6g54020 FvH4_6g54020 FvH4_6g54020
malus_domestica	MD09G1006200.v1.1 MD13G1125400.v1.1 MD16G1126200.v1.1 MD17G1010200.v1.1
prunus_persica	Prupe.1G220000_v2.0.a1 Prupe.3G310800_v2.0.a1 Prupe.3G310800_v2.0.a1
pyrus_communis	pycom111g00450 pycom13g10930 pycom13g10940 pycom16g10730 pycom17g00470
rosa_chinensis	RchiOBHm_Chr2g0176201 RchiOBHm_Chr4g0429401
rosa_laevigata	RLG00000007073 RLG00000022389
rosa_multiflora	Rmu_sc0000363.1_g000044 Rmu_sc0003708.1_g000020 Rmu_sc0009677.1_g000013 Rmu_sc0009677.1_g000014
rosa_roxburghii	Rroxscaffold_2G00076680 Rroxscaffold_5G00371040
rosa_rugosa	Rorug02G0591700 Rorug04G0235800 Rorug04G0235800
rosa_samantha	Rh2AG670300 Rh2BG681800 Rh2CG644600 Rh2DG695400 Rh4AG291500 Rh4BG297200 Rh4CG312800 Rh4DG294300
rosa_wichuraiana	Rw2G054980 Rw4G025240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1976
Acc36I	ACCTGC	1 cut(s)	1976
AccI	GTMKAC	2 cut(s)	223, 1171
AccII	CGCG	1 cut(s)	1148
AccIII	TCCGGA	2 cut(s)	642, 1478
AciI	CCGC	6 cut(s)	107, 165, 677, 849, 1148, 1466
AclWI	GGATC	3 cut(s)	1028, 1106, 1211
AcsI	RAATTY	3 cut(s)	188, 634, 859
AcuI	CTGAAG	4 cut(s)	593, 1719, 1899, 1968
AcyI	GRCGYC	1 cut(s)	1904
AdeI	CACNNNGTG	1 cut(s)	206
AfaI	GTAC	4 cut(s)	1095, 1246, 1263, 1288
AfiI	CCNNNNNNNGG	5 cut(s)	855, 992, 1160, 1316, 1738
AhlI	ACTAGT	1 cut(s)	1471
AjnI	CCWGG	5 cut(s)	111, 1153, 1219, 1311, 1867
Alw21I	GWGCWC	2 cut(s)	99, 873
Alw26I	GTCTC	5 cut(s)	60, 573, 909, 1494, 1860
AlwI	GGATC	3 cut(s)	1028, 1106, 1211
Ama87I	CYCGRG	1 cut(s)	1663
Aor13HI	TCCGGA	2 cut(s)	642, 1478
AoxI	GGCC	3 cut(s)	108, 1163, 1953
ApeKI	GCWGC	9 cut(s)	158, 161, 502, 608, 623, 996, 1143, 1643, 1751
ApoI	RAATTY	3 cut(s)	188, 634, 859
Asp700I	GAANNNNTTC	1 cut(s)	638
AspLEI	GCGC	2 cut(s)	182, 1148
AspS9I	GGNCC	5 cut(s)	109, 969, 1163, 1391, 1442
AsuC2I	CCSGG	1 cut(s)	1602
AsuHPI	GGTGA	7 cut(s)	497, 779, 835, 1235, 1536, 1554, 1884
AsuII	TTCGAA	1 cut(s)	33
AvaI	CYCGRG	1 cut(s)	1663
AvaII	GGWCC	3 cut(s)	969, 1391, 1442
AxyI	CCTNAGG	1 cut(s)	1860
BanII	GRGCYC	2 cut(s)	99, 873
BbsI	GAAGAC	3 cut(s)	11, 547, 587
Bbv12I	GWGCWC	2 cut(s)	99, 873
BbvI	GCAGC	9 cut(s)	148, 170, 514, 610, 620, 1008, 1155, 1630, 1763
BccI	CCATC	3 cut(s)	364, 734, 788
BcgI	CGANNNNNNTGC	4 cut(s)	1644, 1678, 1960, 1994
BciT130I	CCWGG	5 cut(s)	113, 1155, 1221, 1313, 1869
BciVI	GTATCC	1 cut(s)	1540
BcnI	CCSGG	1 cut(s)	1602
BcoDI	GTCTC	5 cut(s)	60, 573, 909, 1494, 1860
BcuI	ACTAGT	1 cut(s)	1471
BfaI	CTAG	7 cut(s)	281, 944, 1050, 1401, 1472, 1593, 1965
BfmI	CTRYAG	4 cut(s)	156, 168, 909, 1058
BfuAI	ACCTGC	1 cut(s)	1976
BfuI	GTATCC	1 cut(s)	1540
Bme1390I	CCNGG	6 cut(s)	113, 1155, 1221, 1313, 1602, 1869
Bme18I	GGWCC	3 cut(s)	969, 1391, 1442
BmeT110I	CYCGRG	1 cut(s)	1663
BmgT120I	GGNCC	5 cut(s)	109, 969, 1163, 1391, 1442
BmiI	GGNNCC	3 cut(s)	1152, 1444, 1866
BmrFI	CCNGG	6 cut(s)	113, 1155, 1221, 1313, 1602, 1869
BmrI	ACTGGG	1 cut(s)	1626
BmuI	ACTGGG	1 cut(s)	1626
BoxI	GACNNNNGTC	1 cut(s)	901
BpiI	GAAGAC	3 cut(s)	11, 547, 587
BpmI	CTGGAG	1 cut(s)	1334
Bpu10I	CCTNAGC	3 cut(s)	84, 102, 1254
Bpu14I	TTCGAA	1 cut(s)	33
BpuEI	CTTGAG	2 cut(s)	683, 958
BpuMI	CCSGG	1 cut(s)	1602
BsaAI	YACGTR	1 cut(s)	1089
BsaBI	GATNNNNATC	2 cut(s)	321, 939
BsaHI	GRCGYC	1 cut(s)	1904
BsaJI	CCNNGG	4 cut(s)	111, 1311, 1600, 1662
BsaWI	WCCGGW	3 cut(s)	642, 1388, 1478
Bsc4I	CCNNNNNNNGG	5 cut(s)	855, 992, 1160, 1316, 1738
Bse1I	ACTGG	5 cut(s)	231, 1437, 1632, 1695, 1931
Bse21I	CCTNAGG	1 cut(s)	1860
Bse3DI	GCAATG	5 cut(s)	239, 1282, 1446, 1829, 1830
Bse8I	GATNNNNATC	2 cut(s)	321, 939
BseAI	TCCGGA	2 cut(s)	642, 1478
BseBI	CCWGG	5 cut(s)	113, 1155, 1221, 1313, 1869
BseDI	CCNNGG	4 cut(s)	111, 1311, 1600, 1662
BseGI	GGATG	1 cut(s)	754
BseJI	GATNNNNATC	2 cut(s)	321, 939
BseLI	CCNNNNNNNGG	5 cut(s)	855, 992, 1160, 1316, 1738
BseMI	GCAATG	5 cut(s)	239, 1282, 1446, 1829, 1830
BseMII	CTCAG	8 cut(s)	98, 116, 641, 893, 1017, 1032, 1268, 1874
BseNI	ACTGG	5 cut(s)	231, 1437, 1632, 1695, 1931
BseRI	GAGGAG	4 cut(s)	551, 713, 1296, 1848
BseXI	GCAGC	9 cut(s)	148, 170, 514, 610, 620, 1008, 1155, 1630, 1763
BsgI	GTGCAG	2 cut(s)	23, 311
Bsh1236I	CGCG	1 cut(s)	1148
BshFI	GGCC	3 cut(s)	110, 1165, 1955
BsiHKAI	GWGCWC	2 cut(s)	99, 873
BsiHKCI	CYCGRG	1 cut(s)	1663
BsiSI	CCGG	4 cut(s)	643, 1389, 1479, 1602
BslFI	GGGAC	3 cut(s)	909, 1332, 1428
BslI	CCNNNNNNNGG	5 cut(s)	855, 992, 1160, 1316, 1738
BsmAI	GTCTC	5 cut(s)	60, 573, 909, 1494, 1860
BsmFI	GGGAC	3 cut(s)	909, 1332, 1428
BsmI	GAATGC	3 cut(s)	1240, 1354, 1488
BsnI	GGCC	3 cut(s)	110, 1165, 1955
BsoBI	CYCGRG	1 cut(s)	1663
Bsp119I	TTCGAA	1 cut(s)	33
Bsp1286I	GDGCHC	2 cut(s)	99, 873
Bsp13I	TCCGGA	2 cut(s)	642, 1478
Bsp143I	GATC	4 cut(s)	1033, 1111, 1216, 1368
BspACI	CCGC	6 cut(s)	107, 165, 677, 849, 1148, 1466
BspANI	GGCC	3 cut(s)	110, 1165, 1955
BspCNI	CTCAG	8 cut(s)	97, 115, 640, 892, 1016, 1033, 1267, 1873
BspEI	TCCGGA	2 cut(s)	642, 1478
BspFNI	CGCG	1 cut(s)	1148
BspHI	TCATGA	2 cut(s)	520, 1582
BspLI	GGNNCC	3 cut(s)	1152, 1444, 1866
BspMAI	CTGCAG	2 cut(s)	160, 1062
BspMI	ACCTGC	1 cut(s)	1976
BspPI	GGATC	3 cut(s)	1028, 1106, 1211
BspT104I	TTCGAA	1 cut(s)	33
BsrDI	GCAATG	5 cut(s)	239, 1282, 1446, 1829, 1830
BsrI	ACTGG	5 cut(s)	231, 1437, 1632, 1695, 1931
BssECI	CCNNGG	4 cut(s)	111, 1311, 1600, 1662
BssMI	GATC	4 cut(s)	1033, 1111, 1216, 1368
BssNI	GRCGYC	1 cut(s)	1904
Bst2UI	CCWGG	5 cut(s)	113, 1155, 1221, 1313, 1869
Bst4CI	ACNGT	2 cut(s)	388, 491
Bst6I	CTCTTC	1 cut(s)	1201
BstACI	GRCGYC	1 cut(s)	1904
BstAPI	GCANNNNNTGC	2 cut(s)	508, 1748
BstBAI	YACGTR	1 cut(s)	1089
BstBI	TTCGAA	1 cut(s)	33
BstC8I	GCNNGC	6 cut(s)	99, 827, 1062, 1577, 1718, 1983
BstDEI	CTNAG	8 cut(s)	84, 102, 627, 879, 1003, 1041, 1254, 1860
BstF5I	GGATG	1 cut(s)	754
BstFNI	CGCG	1 cut(s)	1148
BstHHI	GCGC	2 cut(s)	182, 1148
BstKTI	GATC	4 cut(s)	1036, 1114, 1219, 1371
BstMAI	GTCTC	5 cut(s)	60, 573, 909, 1494, 1860
BstMBI	GATC	4 cut(s)	1033, 1111, 1216, 1368
BstNI	CCWGG	5 cut(s)	113, 1155, 1221, 1313, 1869
BstNSI	RCATGY	5 cut(s)	22, 121, 1720, 1838, 1985
BstPAI	GACNNNNGTC	1 cut(s)	901
BstSCI	CCNGG	6 cut(s)	111, 1153, 1219, 1311, 1600, 1867
BstSFI	CTRYAG	4 cut(s)	156, 168, 909, 1058
BstSNI	TACGTA	1 cut(s)	1089
BstUI	CGCG	1 cut(s)	1148
BstV1I	GCAGC	9 cut(s)	148, 170, 514, 610, 620, 1008, 1155, 1630, 1763
BstV2I	GAAGAC	3 cut(s)	11, 547, 587
BstX2I	RGATCY	1 cut(s)	1216
BstXI	CCANNNNNNTGG	2 cut(s)	725, 1188
BstYI	RGATCY	1 cut(s)	1216
Bsu36I	CCTNAGG	1 cut(s)	1860
BsuI	GTATCC	1 cut(s)	1540
BsuRI	GGCC	3 cut(s)	110, 1165, 1955
BtsCI	GGATG	1 cut(s)	754
BtsI	GCAGTG	1 cut(s)	200
BtsIMutI	CAGTG	5 cut(s)	200, 730, 1444, 1688, 1743
BveI	ACCTGC	1 cut(s)	1976
Cac8I	GCNNGC	6 cut(s)	99, 827, 1062, 1577, 1718, 1983
CciI	TCATGA	2 cut(s)	520, 1582
CfoI	GCGC	2 cut(s)	182, 1148
Cfr13I	GGNCC	5 cut(s)	109, 969, 1163, 1391, 1442
CseI	GACGC	2 cut(s)	1182, 1912
Csp6I	GTAC	4 cut(s)	1094, 1245, 1262, 1287
CspCI	CAANNNNNGTGG	2 cut(s)	1090, 1125
CviQI	GTAC	4 cut(s)	1094, 1245, 1262, 1287
DdeI	CTNAG	8 cut(s)	84, 102, 627, 879, 1003, 1041, 1254, 1860
DpnI	GATC	4 cut(s)	1035, 1113, 1218, 1370
DpnII	GATC	4 cut(s)	1033, 1111, 1216, 1368
DraIII	CACNNNGTG	1 cut(s)	206
Eam1104I	CTCTTC	1 cut(s)	1201
EarI	CTCTTC	1 cut(s)	1201
Ecl136II	GAGCTC	2 cut(s)	97, 871
Eco105I	TACGTA	1 cut(s)	1089
Eco24I	GRGCYC	2 cut(s)	99, 873
Eco47I	GGWCC	3 cut(s)	969, 1391, 1442
Eco53kI	GAGCTC	2 cut(s)	97, 871
Eco57I	CTGAAG	4 cut(s)	593, 1719, 1899, 1968
Eco81I	CCTNAGG	1 cut(s)	1860
Eco88I	CYCGRG	1 cut(s)	1663
EcoICRI	GAGCTC	2 cut(s)	97, 871
EcoO109I	RGGNCCY	1 cut(s)	969
EcoRI	GAATTC	2 cut(s)	188, 859
EcoRII	CCWGG	5 cut(s)	111, 1153, 1219, 1311, 1867
EcoT22I	ATGCAT	3 cut(s)	123, 1240, 1354
EcoT38I	GRGCYC	2 cut(s)	99, 873
FalI	AAGNNNNNCTT	4 cut(s)	882, 914, 1366, 1398
FaqI	GGGAC	3 cut(s)	909, 1332, 1428
FauNDI	CATATG	1 cut(s)	184
FblI	GTMKAC	2 cut(s)	223, 1171
FokI	GGATG	1 cut(s)	761
FriOI	GRGCYC	2 cut(s)	99, 873
FspBI	CTAG	7 cut(s)	281, 944, 1050, 1401, 1472, 1593, 1965
GlaI	GCGC	2 cut(s)	181, 1147
GsuI	CTGGAG	1 cut(s)	1334
HaeIII	GGCC	3 cut(s)	110, 1165, 1955
HapII	CCGG	4 cut(s)	643, 1389, 1479, 1602
HgaI	GACGC	2 cut(s)	1182, 1912
HhaI	GCGC	2 cut(s)	182, 1148
Hin1I	GRCGYC	1 cut(s)	1904
Hin6I	GCGC	2 cut(s)	180, 1146
HinP1I	GCGC	2 cut(s)	180, 1146
HindIII	AAGCTT	1 cut(s)	1792
HinfI	GANTC	6 cut(s)	30, 197, 362, 782, 1853, 1972
HpaII	CCGG	4 cut(s)	643, 1389, 1479, 1602
HphI	GGTGA	7 cut(s)	497, 779, 835, 1235, 1536, 1554, 1884
Hpy166II	GTNNAC	3 cut(s)	224, 728, 1172
Hpy8I	GTNNAC	3 cut(s)	224, 728, 1172
HpyAV	CCTTC	4 cut(s)	280, 1521, 1743, 1815
HpyCH4III	ACNGT	2 cut(s)	388, 491
HpyCH4IV	ACGT	5 cut(s)	475, 681, 1088, 1343, 1923
HpyF3I	CTNAG	8 cut(s)	84, 102, 627, 879, 1003, 1041, 1254, 1860
HpySE526I	ACGT	5 cut(s)	475, 681, 1088, 1343, 1923
Hsp92I	GRCGYC	1 cut(s)	1904
HspAI	GCGC	2 cut(s)	180, 1146
Kpn2I	TCCGGA	2 cut(s)	642, 1478
Kzo9I	GATC	4 cut(s)	1033, 1111, 1216, 1368
LmnI	GCTCC	4 cut(s)	700, 868, 1690, 1992
Lsp1109I	GCAGC	9 cut(s)	148, 170, 514, 610, 620, 1008, 1155, 1630, 1763
MaeI	CTAG	7 cut(s)	281, 944, 1050, 1401, 1472, 1593, 1965
MaeII	ACGT	5 cut(s)	475, 681, 1088, 1343, 1923
MaeIII	GTNAC	7 cut(s)	198, 363, 410, 485, 691, 841, 1676
MalI	GATC	4 cut(s)	1035, 1113, 1218, 1370
MboI	GATC	4 cut(s)	1033, 1111, 1216, 1368
MfeI	CAATTG	1 cut(s)	506
MflI	RGATCY	1 cut(s)	1216
MhlI	GDGCHC	2 cut(s)	99, 873
MlyI	GAGTC	3 cut(s)	206, 371, 1862
Mph1103I	ATGCAT	3 cut(s)	123, 1240, 1354
MroI	TCCGGA	2 cut(s)	642, 1478
MroXI	GAANNNNTTC	1 cut(s)	638
MseI	TTAA	2 cut(s)	654, 810
MslI	CAYNNNNRTG	2 cut(s)	249, 1986
MspA1I	CMGCKG	2 cut(s)	161, 1643
MspI	CCGG	4 cut(s)	643, 1389, 1479, 1602
MspR9I	CCNGG	6 cut(s)	113, 1155, 1221, 1313, 1602, 1869
MunI	CAATTG	1 cut(s)	506
Mva1269I	GAATGC	3 cut(s)	1240, 1354, 1488
MvaI	CCWGG	5 cut(s)	113, 1155, 1221, 1313, 1869
MvnI	CGCG	1 cut(s)	1148
NciI	CCSGG	1 cut(s)	1602
NdeI	CATATG	1 cut(s)	184
NdeII	GATC	4 cut(s)	1033, 1111, 1216, 1368
NlaIV	GGNNCC	3 cut(s)	1152, 1444, 1866
NmuCI	GTSAC	6 cut(s)	198, 363, 410, 485, 841, 1676
NsiI	ATGCAT	3 cut(s)	123, 1240, 1354
NspI	RCATGY	5 cut(s)	22, 121, 1720, 1838, 1985
NspV	TTCGAA	1 cut(s)	33
PaeI	GCATGC	2 cut(s)	1720, 1985
PagI	TCATGA	2 cut(s)	520, 1582
PaqCI	CACCTGC	1 cut(s)	1976
PctI	GAATGC	3 cut(s)	1240, 1354, 1488
PdmI	GAANNNNTTC	1 cut(s)	638
PfeI	GAWTC	3 cut(s)	30, 782, 1972
PfoI	TCCNGGA	1 cut(s)	1153
PleI	GAGTC	3 cut(s)	205, 370, 1861
PpsI	GAGTC	3 cut(s)	205, 370, 1861
Ppu21I	YACGTR	1 cut(s)	1089
PpuMI	RGGWCCY	1 cut(s)	969
PshAI	GACNNNNGTC	1 cut(s)	901
Psp124BI	GAGCTC	2 cut(s)	99, 873
Psp5II	RGGWCCY	1 cut(s)	969
Psp6I	CCWGG	5 cut(s)	111, 1153, 1219, 1311, 1867
PspGI	CCWGG	5 cut(s)	111, 1153, 1219, 1311, 1867
PspN4I	GGNNCC	3 cut(s)	1152, 1444, 1866
PspPI	GGNCC	5 cut(s)	109, 969, 1163, 1391, 1442
PspPPI	RGGWCCY	1 cut(s)	969
PstI	CTGCAG	2 cut(s)	160, 1062
PsuI	RGATCY	1 cut(s)	1216
PvuII	CAGCTG	2 cut(s)	161, 1643
RsaI	GTAC	4 cut(s)	1095, 1246, 1263, 1288
RsaNI	GTAC	4 cut(s)	1094, 1245, 1262, 1287
RseI	CAYNNNNRTG	2 cut(s)	249, 1986
SacI	GAGCTC	2 cut(s)	99, 873
SaqAI	TTAA	2 cut(s)	654, 810
Sau3AI	GATC	4 cut(s)	1033, 1111, 1216, 1368
Sau96I	GGNCC	5 cut(s)	109, 969, 1163, 1391, 1442
SchI	GAGTC	3 cut(s)	206, 371, 1862
ScrFI	CCNGG	6 cut(s)	113, 1155, 1221, 1313, 1602, 1869
SduI	GDGCHC	2 cut(s)	99, 873
SfcI	CTRYAG	4 cut(s)	156, 168, 909, 1058
SfuI	TTCGAA	1 cut(s)	33
SinI	GGWCC	3 cut(s)	969, 1391, 1442
SmiMI	CAYNNNNRTG	2 cut(s)	249, 1986
SmlI	CTYRAG	2 cut(s)	662, 973
SmoI	CTYRAG	2 cut(s)	662, 973
SnaBI	TACGTA	1 cut(s)	1089
SpeI	ACTAGT	1 cut(s)	1471
SphI	GCATGC	2 cut(s)	1720, 1985
SsiI	CCGC	6 cut(s)	107, 165, 677, 849, 1148, 1466
SspMI	CTAG	7 cut(s)	281, 944, 1050, 1401, 1472, 1593, 1965
SstI	GAGCTC	2 cut(s)	99, 873
StyD4I	CCNGG	6 cut(s)	111, 1153, 1219, 1311, 1600, 1867
TaaI	ACNGT	2 cut(s)	388, 491
TaiI	ACGT	5 cut(s)	478, 684, 1091, 1346, 1926
TaqI	TCGA	4 cut(s)	33, 90, 1919, 1975
TatI	WGTACW	1 cut(s)	1093
TauI	GCSGC	3 cut(s)	110, 167, 679
TfiI	GAWTC	3 cut(s)	30, 782, 1972
Tru1I	TTAA	2 cut(s)	654, 810
Tru9I	TTAA	2 cut(s)	654, 810
TscAI	CASTG	5 cut(s)	207, 730, 1444, 1695, 1743
TseFI	GTSAC	6 cut(s)	198, 363, 410, 485, 841, 1676
TseI	GCWGC	9 cut(s)	158, 161, 502, 608, 623, 996, 1143, 1643, 1751
Tsp45I	GTSAC	6 cut(s)	198, 363, 410, 485, 841, 1676
TspGWI	ACGGA	1 cut(s)	1090
TspRI	CASTG	5 cut(s)	207, 730, 1444, 1695, 1743
VpaK11BI	GGWCC	3 cut(s)	969, 1391, 1442
XapI	RAATTY	3 cut(s)	188, 634, 859
XbaI	TCTAGA	1 cut(s)	943
XceI	RCATGY	5 cut(s)	22, 121, 1720, 1838, 1985
XmiI	GTMKAC	2 cut(s)	223, 1171
XmnI	GAANNNNTTC	1 cut(s)	638
XspI	CTAG	7 cut(s)	281, 944, 1050, 1401, 1472, 1593, 1965
Zsp2I	ATGCAT	3 cut(s)	123, 1240, 1354

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.