Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0001635

Physical Location & Seq

Genomic Coordinates Forward (+)

82551460 .. 82556550

Gene Structure 5091 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G054980.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGAAGTCGTCTTTTGACAAGCTTCGGAGATTCGAACTGTACAAGAGCGGTTCTAAAGATAAGAGGAACTTTCAACCCTCGGCTCACGTCGATGAGCTCGCTCAGGCTTCTCAGGACATGCAAGATATGAGAAATTGCTATGATAGCTTACTTTCTGCAGCTGCTGCTACAGCCAACAGCGCCTATGAATTCTCCGAATCACTGCGGGAAATGGGTTCTTGTCTGCAGGAGAAAACTGCATTACATCATGATGAACGAGGCGGTAGAGTTTTTCTGATGTTGGGGAAAGTGCAGTTTGAACTTCAAAAACTTGTTGATTCCTATCGATCTCATATAGTTTCGACAGTCACAAACCCATCAGAGTCTCTTCTCAATGAACTTCGAACAGTTGAGGAAATGAAGCGACAATGTGATGAAAAACGAGAGGTATATGAATACATGGTAGCACAACAGAAAGAAAAAGGGAGATCAAAACGTGGGAAGGGCGAAAGCTTTACTTTGCAGCAACTGCAAGTAGCTCGTGAGGAATATGATGAGGAAGCTACACTGTGTGTTTTCCGGTTGAAGTCCCTGAAGCAAGGGCAAGCCCGAAGTCTTCTAACACAAGCAGCTCGCCACCATGCTGCTCAGTTGAACTTCTTCCGGAAAGGACTTAAGTCACTTGAGGCTGTCGAGCCACATGTTAGGTTGGTTACAGAGGAGCAACATATTGAATACCAATTTAGTGGACTTGAAGACGATGGTGAGGATGATGGTGCAGATCATGGTGAGAATAGCAACGATTCTATTGAAGATGGAGAATTGAGTTTTGACTATAGACCAAGTAAGCAGGGAATGGAAGTCTCTGCATCAAGGAATTCAATGGAGGTTGATGAAGTGGGCCATTTGTCTCCTCAAGCTTCAACACTGGAATATCCAGATATAAATCTTGATCAAGGTGAACTCAAGTTTCCGAGTAGAGAACCAAGAATAAGCGGCAGCTACTCAGCCCCAATAGTTTCTGCAGATCCGAAGTTTGATCCCGCTGAGAGAGCTAGACAATTGCAACTGTCAGCTACACGGAGGCCTAACGCATATGTGCTGCCTACACCTGATTCAAAGGGTTTAGTTTCTTCAAGGACAAGTAGTACGGTTCCAGGAGTGAGGTCAGGTGGACGCATCCATAACTTATCGTACTCTTCCCCATTAGACGCGAAGCATGATAAGTATTCTGGTGATGATAATGTGTCAGGAGCTAATTTCTCAAAAGCACAGTCTGTAGTCAAAGAGAGCCATAGTACTAATACATCAATGCAACTGCCTCCTCCTCCTCTGGCAGACGGACTGGCACAACATCAGCATAAAAGACAAGCTTTCTCTGGCCCACTAACTAGTAAGCCATCGTCAACTAAGCCTGCGTTCTCTGCTAGTGGTCCCATTGTATCTAGTGAACCACCTCAACTAGTTTCTGGTATGCTTCCTCGTTTACCAAATCCTCAGCCTTCTTCATCTCCAAAAGTATCCCCAAGTGCTTCACCGCCCCTTGCTTCTTCACCCAAGATAAGTGAGCTTCACGAGCTTCCTAGACCCCCAGGTAGTTCAGTTGTCAAGCCAACAAAATCTTCTGGATTGGTTGGCCACTCTGCTCCACTGATCTCCAGAAATCAAGAACCTCACATTCAGAATAAAATCCCTTCAGCGCCAACAAATTTGGCATCTCCACTTCCAATTCCACCATTGATTATTCCTAGAAGTTTCTCCATACCTTCGAGTAACCAAAGAGCAGTGACATTGCATGTACCTAGGCATTTGGAGTCTCCTCTAGGTTCAAGCAATCCGGAAGAAGTTGCTTCACCTCCATTGACGCCAATTACCCTAACAAACATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BAR BAR_3

Protein Analysis

622

Amino Acids

68.19

Weight (kDa)

6.59

Isoelectric Point (pI)

57.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BAR_3	PF16746	29 - 231	8.6e-06	BAR domain of APPL family
BAR	PF03114	42 - 227	4.8e-08	BAR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001635)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33490 AT2G33490 AT2G33490
fragaria_vesca	FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_6g54020 FvH4_6g54020 FvH4_6g54020
malus_domestica	MD09G1006200.v1.1 MD13G1125400.v1.1 MD16G1126200.v1.1 MD17G1010200.v1.1
prunus_persica	Prupe.1G220000_v2.0.a1 Prupe.3G310800_v2.0.a1 Prupe.3G310800_v2.0.a1
pyrus_communis	pycom111g00450 pycom13g10930 pycom13g10940 pycom16g10730 pycom17g00470
rosa_chinensis	RchiOBHm_Chr2g0176201 RchiOBHm_Chr4g0429401
rosa_laevigata	RLG00000007073 RLG00000022389
rosa_multiflora	Rmu_sc0000363.1_g000044 Rmu_sc0003708.1_g000020 Rmu_sc0009677.1_g000013 Rmu_sc0009677.1_g000014
rosa_roxburghii	Rroxscaffold_2G00076680 Rroxscaffold_5G00371040
rosa_rugosa	Rorug02G0591700 Rorug04G0235800 Rorug04G0235800
rosa_samantha	Rh2AG670300 Rh2BG681800 Rh2CG644600 Rh2DG695400 Rh4AG291500 Rh4BG297200 Rh4CG312800 Rh4DG294300
rosa_wichuraiana	Rw2G054980 Rw4G025240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	48
AccII	CGCG	1 cut(s)	1193
AccIII	TCCGGA	2 cut(s)	642, 1816
AciI	CCGC	6 cut(s)	48, 205, 261, 975, 1023, 1517
AclWI	GGATC	2 cut(s)	1001, 1013
AcoI	YGGCCR	1 cut(s)	1615
AcsI	RAATTY	3 cut(s)	188, 856, 1687
AcuI	CTGAAG	2 cut(s)	593, 1659
AcyI	GRCGYC	1 cut(s)	1844
AdeI	CACNNNGTG	1 cut(s)	551
AfaI	GTAC	5 cut(s)	41, 1129, 1175, 1279, 1779
AflII	CTTAAG	1 cut(s)	653
AflIII	ACRYGT	2 cut(s)	679, 1863
AhlI	ACTAGT	2 cut(s)	1370, 1441
AjiI	CACGTC	1 cut(s)	88
AjnI	CCWGG	2 cut(s)	1135, 1570
AjuI	GAANNNNNNNTTGG	2 cut(s)	1585, 1617
Alw21I	GWGCWC	1 cut(s)	99
Alw26I	GTCTC	4 cut(s)	369, 847, 894, 1800
AlwI	GGATC	2 cut(s)	1001, 1013
AlwNI	CAGNNNCTG	2 cut(s)	164, 508
Aor13HI	TCCGGA	2 cut(s)	642, 1816
AoxI	GGCC	4 cut(s)	880, 1064, 1360, 1615
ApeKI	GCWGC	8 cut(s)	158, 161, 164, 502, 608, 623, 978, 1081
ApoI	RAATTY	3 cut(s)	188, 856, 1687
ArsI	GACNNNNNNTTYG	2 cut(s)	1238, 1270
Asp700I	GAANNNNTTC	1 cut(s)	638
AspA2I	CCTAGG	1 cut(s)	1781
AspLEI	GCGC	2 cut(s)	182, 1681
AspS9I	GGNCC	3 cut(s)	880, 1361, 1412
AsuHPI	GGTGA	7 cut(s)	755, 779, 950, 1226, 1506, 1524, 1824
AsuII	TTCGAA	2 cut(s)	33, 382
AvaII	GGWCC	1 cut(s)	1412
AvrII	CCTAGG	1 cut(s)	1781
BalI	TGGCCA	1 cut(s)	1617
BanII	GRGCYC	1 cut(s)	99
BauI	CACGAG	2 cut(s)	519, 1553
BbsI	GAAGAC	2 cut(s)	587, 741
Bbv12I	GWGCWC	1 cut(s)	99
BbvCI	CCTCAGC	1 cut(s)	1476
BbvI	GCAGC	8 cut(s)	148, 151, 170, 514, 610, 620, 990, 1068
BccI	CCATC	5 cut(s)	364, 734, 746, 788, 1387
BcgI	CGANNNNNNTGC	2 cut(s)	500, 534
BciT130I	CCWGG	2 cut(s)	1137, 1572
BciVI	GTATCC	1 cut(s)	1510
BclI	TGATCA	1 cut(s)	931
BcoDI	GTCTC	4 cut(s)	369, 847, 894, 1800
BcuI	ACTAGT	2 cut(s)	1370, 1441
BfaI	CTAG	9 cut(s)	1035, 1371, 1407, 1425, 1442, 1563, 1728, 1782, 1802
BfmI	CTRYAG	6 cut(s)	156, 168, 224, 814, 1002, 1257
BfoI	RGCGCY	2 cut(s)	183, 1682
BfrI	CTTAAG	1 cut(s)	653
BfuI	GTATCC	1 cut(s)	1510
BisI	GCNGC	9 cut(s)	159, 162, 165, 503, 609, 624, 976, 979, 1082
BlnI	CCTAGG	1 cut(s)	1781
BlsI	GCNGC	9 cut(s)	160, 163, 166, 504, 610, 625, 977, 980, 1083
BmcAI	AGTACT	1 cut(s)	1279
Bme1390I	CCNGG	2 cut(s)	1137, 1572
Bme18I	GGWCC	1 cut(s)	1412
BmgBI	CACGTC	1 cut(s)	88
BmgT120I	GGNCC	3 cut(s)	880, 1361, 1412
BmiI	GGNNCC	2 cut(s)	1134, 1414
BmrFI	CCNGG	2 cut(s)	1137, 1572
BmsI	GCATC	3 cut(s)	857, 1167, 1703
BoxI	GACNNNNGTC	1 cut(s)	655
BpiI	GAAGAC	2 cut(s)	587, 741
BpmI	CTGGAG	1 cut(s)	1621
Bpu10I	CCTNAGC	2 cut(s)	102, 1476
Bpu14I	TTCGAA	2 cut(s)	33, 382
BpuEI	CTTGAG	3 cut(s)	683, 879, 929
Bsa29I	ATCGAT	1 cut(s)	325
BsaBI	GATNNNNATC	2 cut(s)	321, 924
BsaHI	GRCGYC	1 cut(s)	1844
BsaJI	CCNNGG	3 cut(s)	78, 1570, 1781
BsaWI	WCCGGW	3 cut(s)	558, 642, 1816
Bse1I	ACTGG	2 cut(s)	912, 1329
Bse3DI	GCAATG	1 cut(s)	1769
Bse8I	GATNNNNATC	2 cut(s)	321, 924
BseAI	TCCGGA	2 cut(s)	642, 1816
BseBI	CCWGG	2 cut(s)	1137, 1572
BseCI	ATCGAT	1 cut(s)	325
BseDI	CCNNGG	3 cut(s)	78, 1570, 1781
BseGI	GGATG	2 cut(s)	754, 1158
BseJI	GATNNNNATC	2 cut(s)	321, 924
BseMI	GCAATG	1 cut(s)	1769
BseMII	CTCAG	6 cut(s)	116, 125, 641, 999, 1017, 1490
BseNI	ACTGG	2 cut(s)	912, 1329
BseRI	GAGGAG	6 cut(s)	713, 882, 1293, 1296, 1299, 1788
BseXI	GCAGC	8 cut(s)	148, 151, 170, 514, 610, 620, 990, 1068
BsgI	GTGCAG	2 cut(s)	311, 777
Bsh1236I	CGCG	1 cut(s)	1193
BshFI	GGCC	4 cut(s)	882, 1066, 1362, 1617
BshVI	ATCGAT	1 cut(s)	325
BsiHKAI	GWGCWC	1 cut(s)	99
BsiSI	CCGG	3 cut(s)	559, 643, 1817
BslFI	GGGAC	2 cut(s)	553, 1398
BsmAI	GTCTC	4 cut(s)	369, 847, 894, 1800
BsmFI	GGGAC	2 cut(s)	553, 1398
BsnI	GGCC	4 cut(s)	882, 1066, 1362, 1617
Bsp119I	TTCGAA	2 cut(s)	33, 382
Bsp1286I	GDGCHC	1 cut(s)	99
Bsp13I	TCCGGA	2 cut(s)	642, 1816
Bsp1407I	TGTACA	1 cut(s)	39
Bsp143I	GATC	7 cut(s)	326, 467, 760, 931, 1006, 1018, 1632
BspACI	CCGC	6 cut(s)	48, 205, 261, 975, 1023, 1517
BspANI	GGCC	4 cut(s)	882, 1066, 1362, 1617
BspCNI	CTCAG	6 cut(s)	115, 124, 640, 998, 1018, 1489
BspDI	ATCGAT	1 cut(s)	325
BspEI	TCCGGA	2 cut(s)	642, 1816
BspFNI	CGCG	1 cut(s)	1193
BspHI	TCATGA	1 cut(s)	247
BspLI	GGNNCC	2 cut(s)	1134, 1414
BspMAI	CTGCAG	3 cut(s)	160, 228, 1006
BspPI	GGATC	2 cut(s)	1001, 1013
BspT104I	TTCGAA	2 cut(s)	33, 382
BspTI	CTTAAG	1 cut(s)	653
BsrBI	CCGCTC	1 cut(s)	48
BsrDI	GCAATG	1 cut(s)	1769
BsrGI	TGTACA	1 cut(s)	39
BsrI	ACTGG	2 cut(s)	912, 1329
BssECI	CCNNGG	3 cut(s)	78, 1570, 1781
BssMI	GATC	7 cut(s)	326, 467, 760, 931, 1006, 1018, 1632
BssNI	GRCGYC	1 cut(s)	1844
BssSI	CACGAG	2 cut(s)	519, 1553
BssT1I	CCWWGG	1 cut(s)	1781
Bst2BI	CACGAG	2 cut(s)	519, 1553
Bst2UI	CCWGG	2 cut(s)	1137, 1572
Bst4CI	ACNGT	7 cut(s)	39, 346, 388, 549, 1050, 1132, 1254
Bst6I	CTCTTC	2 cut(s)	372, 1183
BstACI	GRCGYC	1 cut(s)	1844
BstAFI	CTTAAG	1 cut(s)	653
BstAPI	GCANNNNNTGC	2 cut(s)	164, 508
BstAUI	TGTACA	1 cut(s)	39
BstBI	TTCGAA	2 cut(s)	33, 382
BstC8I	GCNNGC	4 cut(s)	99, 585, 613, 1395
BstDEI	CTNAG	7 cut(s)	102, 111, 627, 985, 1026, 1389, 1476
BstF5I	GGATG	2 cut(s)	754, 1158
BstFNI	CGCG	1 cut(s)	1193
BstH2I	RGCGCY	2 cut(s)	183, 1682
BstHHI	GCGC	2 cut(s)	182, 1681
BstKTI	GATC	7 cut(s)	329, 470, 763, 934, 1009, 1021, 1635
BstMAI	GTCTC	4 cut(s)	369, 847, 894, 1800
BstMBI	GATC	7 cut(s)	326, 467, 760, 931, 1006, 1018, 1632
BstMWI	GCNNNNNNNGC	8 cut(s)	144, 164, 170, 179, 508, 1031, 1403, 1555
BstNI	CCWGG	2 cut(s)	1137, 1572
BstNSI	RCATGY	4 cut(s)	121, 683, 1778, 1867
BstPAI	GACNNNNGTC	1 cut(s)	655
BstSCI	CCNGG	2 cut(s)	1135, 1570
BstSFI	CTRYAG	6 cut(s)	156, 168, 224, 814, 1002, 1257
BstUI	CGCG	1 cut(s)	1193
BstV1I	GCAGC	8 cut(s)	148, 151, 170, 514, 610, 620, 990, 1068
BstV2I	GAAGAC	2 cut(s)	587, 741
BstX2I	RGATCY	1 cut(s)	1006
BstXI	CCANNNNNNTGG	1 cut(s)	725
BstYI	RGATCY	1 cut(s)	1006
Bsu15I	ATCGAT	1 cut(s)	325
BsuI	GTATCC	1 cut(s)	1510
BsuRI	GGCC	4 cut(s)	882, 1066, 1362, 1617
BsuTUI	ATCGAT	1 cut(s)	325
BtrI	CACGTC	1 cut(s)	88
BtsCI	GGATG	2 cut(s)	754, 1158
BtsI	GCAGTG	2 cut(s)	200, 1770
BtsIMutI	CAGTG	5 cut(s)	200, 545, 905, 1628, 1770
Cac8I	GCNNGC	4 cut(s)	99, 585, 613, 1395
CaiI	CAGNNNCTG	2 cut(s)	164, 508
CciI	TCATGA	1 cut(s)	247
CfoI	GCGC	2 cut(s)	182, 1681
Cfr13I	GGNCC	3 cut(s)	880, 1361, 1412
ClaI	ATCGAT	1 cut(s)	325
CseI	GACGC	3 cut(s)	1164, 1199, 1852
Csp6I	GTAC	5 cut(s)	40, 1128, 1174, 1278, 1778
CviAII	CATG	9 cut(s)	118, 248, 439, 620, 680, 764, 1199, 1775, 1864
CviQI	GTAC	5 cut(s)	40, 1128, 1174, 1278, 1778
DdeI	CTNAG	7 cut(s)	102, 111, 627, 985, 1026, 1389, 1476
DpnI	GATC	7 cut(s)	328, 469, 762, 933, 1008, 1020, 1634
DpnII	GATC	7 cut(s)	326, 467, 760, 931, 1006, 1018, 1632
DraIII	CACNNNGTG	1 cut(s)	551
EaeI	YGGCCR	1 cut(s)	1615
Eam1104I	CTCTTC	2 cut(s)	372, 1183
EarI	CTCTTC	2 cut(s)	372, 1183
Ecl136II	GAGCTC	1 cut(s)	97
Eco130I	CCWWGG	1 cut(s)	1781
Eco147I	AGGCCT	1 cut(s)	1066
Eco24I	GRGCYC	1 cut(s)	99
Eco47I	GGWCC	1 cut(s)	1412
Eco53kI	GAGCTC	1 cut(s)	97
Eco57I	CTGAAG	2 cut(s)	593, 1659
EcoICRI	GAGCTC	1 cut(s)	97
EcoRI	GAATTC	2 cut(s)	188, 856
EcoRII	CCWGG	2 cut(s)	1135, 1570
EcoT14I	CCWWGG	1 cut(s)	1781
EcoT38I	GRGCYC	1 cut(s)	99
ErhI	CCWWGG	1 cut(s)	1781
FaeI	CATG	9 cut(s)	121, 251, 442, 623, 683, 767, 1202, 1778, 1867
FalI	AAGNNNNNCTT	6 cut(s)	53, 85, 481, 513, 1336, 1368
FaqI	GGGAC	2 cut(s)	553, 1398
FatI	CATG	9 cut(s)	117, 247, 438, 619, 679, 763, 1198, 1774, 1863
FauI	CCCGC	2 cut(s)	198, 1030
FauNDI	CATATG	1 cut(s)	1075
FbaI	TGATCA	1 cut(s)	931
Fnu4HI	GCNGC	9 cut(s)	159, 162, 165, 503, 609, 624, 976, 979, 1082
FokI	GGATG	2 cut(s)	761, 1145
FriOI	GRGCYC	1 cut(s)	99
Fsp4HI	GCNGC	9 cut(s)	159, 162, 165, 503, 609, 624, 976, 979, 1082
FspBI	CTAG	9 cut(s)	1035, 1371, 1407, 1425, 1442, 1563, 1728, 1782, 1802
GlaI	GCGC	2 cut(s)	181, 1680
GluI	GCNGC	9 cut(s)	159, 162, 165, 503, 609, 624, 976, 979, 1082
GsuI	CTGGAG	1 cut(s)	1621
HaeII	RGCGCY	2 cut(s)	183, 1682
HaeIII	GGCC	4 cut(s)	882, 1066, 1362, 1617
HapII	CCGG	3 cut(s)	559, 643, 1817
HgaI	GACGC	3 cut(s)	1164, 1199, 1852
HhaI	GCGC	2 cut(s)	182, 1681
Hin1I	GRCGYC	1 cut(s)	1844
Hin1II	CATG	9 cut(s)	121, 251, 442, 623, 683, 767, 1202, 1778, 1867
Hin6I	GCGC	2 cut(s)	180, 1679
HinP1I	GCGC	2 cut(s)	180, 1679
HincII	GTYRAC	1 cut(s)	1386
HindII	GTYRAC	1 cut(s)	1386
HindIII	AAGCTT	4 cut(s)	20, 490, 897, 1350
HinfI	GANTC	7 cut(s)	30, 197, 317, 362, 782, 1094, 1793
HpaII	CCGG	3 cut(s)	559, 643, 1817
HphI	GGTGA	7 cut(s)	755, 779, 950, 1226, 1506, 1524, 1824
Hpy166II	GTNNAC	6 cut(s)	728, 941, 1154, 1386, 1430, 1466
Hpy188I	TCNGA	7 cut(s)	27, 196, 276, 361, 954, 1011, 1662
Hpy8I	GTNNAC	6 cut(s)	728, 941, 1154, 1386, 1430, 1466
Hpy99I	CGWCG	1 cut(s)	92
HpyAV	CCTTC	4 cut(s)	475, 1491, 1683, 1755
HpyCH4III	ACNGT	7 cut(s)	39, 346, 388, 549, 1050, 1132, 1254
HpyCH4IV	ACGT	2 cut(s)	87, 475
HpyF10VI	GCNNNNNNNGC	8 cut(s)	144, 164, 170, 179, 508, 1031, 1403, 1555
HpyF3I	CTNAG	7 cut(s)	102, 111, 627, 985, 1026, 1389, 1476
HpySE526I	ACGT	2 cut(s)	87, 475
Hsp92I	GRCGYC	1 cut(s)	1844
Hsp92II	CATG	9 cut(s)	121, 251, 442, 623, 683, 767, 1202, 1778, 1867
HspAI	GCGC	2 cut(s)	180, 1679
Kpn2I	TCCGGA	2 cut(s)	642, 1816
Ksp22I	TGATCA	1 cut(s)	931
Kzo9I	GATC	7 cut(s)	326, 467, 760, 931, 1006, 1018, 1632
LmnI	GCTCC	3 cut(s)	700, 1232, 1630
Lsp1109I	GCAGC	8 cut(s)	148, 151, 170, 514, 610, 620, 990, 1068
LweI	GCATC	3 cut(s)	857, 1167, 1703
MaeI	CTAG	9 cut(s)	1035, 1371, 1407, 1425, 1442, 1563, 1728, 1782, 1802
MaeII	ACGT	2 cut(s)	87, 475
MaeIII	GTNAC	5 cut(s)	346, 657, 691, 1751, 1765
MalI	GATC	7 cut(s)	328, 469, 762, 933, 1008, 1020, 1634
MbiI	CCGCTC	1 cut(s)	48
MboI	GATC	7 cut(s)	326, 467, 760, 931, 1006, 1018, 1632
MfeI	CAATTG	1 cut(s)	1040
MflI	RGATCY	1 cut(s)	1006
MhlI	GDGCHC	1 cut(s)	99
MlsI	TGGCCA	1 cut(s)	1617
MluNI	TGGCCA	1 cut(s)	1617
MlyI	GAGTC	2 cut(s)	371, 1802
Mox20I	TGGCCA	1 cut(s)	1617
MroI	TCCGGA	2 cut(s)	642, 1816
MroXI	GAANNNNTTC	1 cut(s)	638
MscI	TGGCCA	1 cut(s)	1617
MseI	TTAA	1 cut(s)	654
MslI	CAYNNNNRTG	2 cut(s)	90, 249
Msp20I	TGGCCA	1 cut(s)	1617
MspA1I	CMGCKG	2 cut(s)	161, 1025
MspCI	CTTAAG	1 cut(s)	653
MspI	CCGG	3 cut(s)	559, 643, 1817
MspR9I	CCNGG	2 cut(s)	1137, 1572
MunI	CAATTG	1 cut(s)	1040
MvaI	CCWGG	2 cut(s)	1137, 1572
MvnI	CGCG	1 cut(s)	1193
MwoI	GCNNNNNNNGC	8 cut(s)	144, 164, 170, 179, 508, 1031, 1403, 1555
NdeI	CATATG	1 cut(s)	1075
NdeII	GATC	7 cut(s)	326, 467, 760, 931, 1006, 1018, 1632
NlaIII	CATG	9 cut(s)	121, 251, 442, 623, 683, 767, 1202, 1778, 1867
NlaIV	GGNNCC	2 cut(s)	1134, 1414
NmeAIII	GCCGAG	1 cut(s)	59
NmuCI	GTSAC	3 cut(s)	346, 657, 1765
NspI	RCATGY	4 cut(s)	121, 683, 1778, 1867
NspV	TTCGAA	2 cut(s)	33, 382
PagI	TCATGA	1 cut(s)	247
PceI	AGGCCT	1 cut(s)	1066
PciI	ACATGT	2 cut(s)	679, 1863
PdmI	GAANNNNTTC	1 cut(s)	638
PfeI	GAWTC	5 cut(s)	30, 197, 317, 782, 1094
PfoI	TCCNGGA	1 cut(s)	1135
PkrI	GCNGC	9 cut(s)	160, 163, 166, 504, 610, 625, 977, 980, 1083
PleI	GAGTC	2 cut(s)	370, 1801
PpsI	GAGTC	2 cut(s)	370, 1801
PscI	ACATGT	2 cut(s)	679, 1863
PshAI	GACNNNNGTC	1 cut(s)	655
Psp124BI	GAGCTC	1 cut(s)	99
Psp6I	CCWGG	2 cut(s)	1135, 1570
PspGI	CCWGG	2 cut(s)	1135, 1570
PspN4I	GGNNCC	2 cut(s)	1134, 1414
PspPI	GGNCC	3 cut(s)	880, 1361, 1412
PstI	CTGCAG	3 cut(s)	160, 228, 1006
PstNI	CAGNNNCTG	2 cut(s)	164, 508
PsuI	RGATCY	1 cut(s)	1006
PvuII	CAGCTG	1 cut(s)	161
RsaI	GTAC	5 cut(s)	41, 1129, 1175, 1279, 1779
RsaNI	GTAC	5 cut(s)	40, 1128, 1174, 1278, 1778
RseI	CAYNNNNRTG	2 cut(s)	90, 249
SacI	GAGCTC	1 cut(s)	99
SaqAI	TTAA	1 cut(s)	654
SatI	GCNGC	9 cut(s)	159, 162, 165, 503, 609, 624, 976, 979, 1082
Sau3AI	GATC	7 cut(s)	326, 467, 760, 931, 1006, 1018, 1632
Sau96I	GGNCC	3 cut(s)	880, 1361, 1412
ScaI	AGTACT	1 cut(s)	1279
SchI	GAGTC	2 cut(s)	371, 1802
ScrFI	CCNGG	2 cut(s)	1137, 1572
SduI	GDGCHC	1 cut(s)	99
SfaNI	GCATC	3 cut(s)	857, 1167, 1703
SfcI	CTRYAG	6 cut(s)	156, 168, 224, 814, 1002, 1257
SfuI	TTCGAA	2 cut(s)	33, 382
SinI	GGWCC	1 cut(s)	1412
SmiMI	CAYNNNNRTG	2 cut(s)	90, 249
SmlI	CTYRAG	4 cut(s)	653, 662, 894, 944
SmoI	CTYRAG	4 cut(s)	653, 662, 894, 944
SpeI	ACTAGT	2 cut(s)	1370, 1441
SseBI	AGGCCT	1 cut(s)	1066
SsiI	CCGC	6 cut(s)	48, 205, 261, 975, 1023, 1517
SspMI	CTAG	9 cut(s)	1035, 1371, 1407, 1425, 1442, 1563, 1728, 1782, 1802
SstI	GAGCTC	1 cut(s)	99
StuI	AGGCCT	1 cut(s)	1066
StyD4I	CCNGG	2 cut(s)	1135, 1570
StyI	CCWWGG	1 cut(s)	1781
TaaI	ACNGT	7 cut(s)	39, 346, 388, 549, 1050, 1132, 1254
TaiI	ACGT	2 cut(s)	90, 478
TaqI	TCGA	7 cut(s)	33, 90, 325, 341, 382, 672, 1748
TatI	WGTACW	2 cut(s)	39, 1277
TauI	GCSGC	1 cut(s)	978
TfiI	GAWTC	5 cut(s)	30, 197, 317, 782, 1094
Tru1I	TTAA	1 cut(s)	654
Tru9I	TTAA	1 cut(s)	654
TscAI	CASTG	5 cut(s)	207, 552, 912, 1635, 1770
TseFI	GTSAC	3 cut(s)	346, 657, 1765
TseI	GCWGC	8 cut(s)	158, 161, 164, 502, 608, 623, 978, 1081
Tsp45I	GTSAC	3 cut(s)	346, 657, 1765
TspDTI	ATGAA	9 cut(s)	17, 201, 267, 390, 413, 429, 447, 888, 1476
TspGWI	ACGGA	2 cut(s)	1075, 1335
TspRI	CASTG	5 cut(s)	207, 552, 912, 1635, 1770
Vha464I	CTTAAG	1 cut(s)	653
VpaK11BI	GGWCC	1 cut(s)	1412
XapI	RAATTY	3 cut(s)	188, 856, 1687
XceI	RCATGY	4 cut(s)	121, 683, 1778, 1867
XmaJI	CCTAGG	1 cut(s)	1781
XmnI	GAANNNNTTC	1 cut(s)	638
XspI	CTAG	9 cut(s)	1035, 1371, 1407, 1425, 1442, 1563, 1728, 1782, 1802
ZrmI	AGTACT	1 cut(s)	1279

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.