Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0001635

Physical Location & Seq

Genomic Coordinates Forward (+)

39497602 .. 39503069

Gene Structure 5468 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g54020.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1881 bp

ATGAGGTCGTCCTTTGATAGGCTTCGGAGATTTGAACTGCACAAGAGCGGTTCTAAAGATCAGAGGAACTTTCAACCCTCGGCTCATGTTGATGAGCTCGCTCAGGCTGCTCAGGACATGCAAGGTATGAGAAATTGCTATGATAGCTTACTTTCTGCAGCTGCTGCTACAGCCAACAGCGCCTATGAATTCTCTGAATCACTGCGGGAAATGGGTTCTTGTCTGCAGGAGAAAACTGTATTACATGATGATGAACATGGCGGTAGAGTTTTTCTGATGTTGGGGAACGTGCAGTTTGAACTTCAAAAACTTGTTGATTCCTATCGCTCCCATATAGTTTCGACGGTCACAAACCCATCAGAGTCTCTTCTCAATGAACTTCGAACAGTTGAGGAAATGAAGCGACAATGCGATGAAAAAAGGGAGGTATATGAATACATGGTAGCACAACAGAAAGAAAAAGGGAGATCAAAACGTGGGAAGGGTGAGAGCTTTACTTTGCAGCAACTTCAAGCAGCTCGTGATCAGTATGATGAGGATGCTACACTGTGTGTTTTCCGGCTGAAGTCCCTGAAGCAAGGGCAAGCCCGAAGTCTTCTAACACAAGCAGCTCGCCACCATGCTGCTCAGTTGAACTTCTTCCGGAAAGGCCTTAAGTCGCTTGAGGCTGTTGAGCCACATGTTAGGTTGGTTACGGAGGAGCAACATATTGAATACCAATTTAGTGGACTTGAAGATGATGGCGCAGATCATGGTGAGAATAGCTACGATTCTATTGAAAATGGAGAATTGAGTTTTGACTATAGATCAAGTAAACAGGGAATGGAAGTCTCTGCATCAAGGAGTTCAATGGAGGTTGATGAAGTGGGCCATATGTCTCCTGAAGCTCCGAGAGTGGAATATTCAGATATTAGTCTTGATCAAGGTGATCTCAACTTTCAAAAAGGTGATCTCAAGTTTCCGATCAGGGAACCAAGAAGAGCCGGCAGCTACTCAGCCCCAATACCATCTGCAGAGCCGAAGTTTGATCCTGCTGAGAGAGCTAGACAATTGCAACTGTCAGCTTCACGGAGACCTCATACATATGTGCTTCCTACACCTGATTCAAAGGGTTTAATTTCTTCAAGGACAAGTACTACGGTTCCAGGCGGGAGGTCAGGTGGACGCATCCCCAACTTATCGCACTCTTCCCCATTAGACGCTAAGCGTGATAAGTATTCTGGTGATGATAATCAGACAGGAGCTAATTTCTCAAAAGCTCAGTTGGTAGTCAAAGAGAGTCATAGTACTACTAATACATCGATGCAATTGCCTCCTCCCCCTCTGGCAGACGGACTGGCACTGCATCAGCATAAAAGACAAGCTTTCTCTGGCCCACTAACTAGTAAGCCATCATCAACTAAGCCTGCATTCTCTGCTAGTGGTCCCATTGCATCAAGTGAACCACCTCAACTAGTTTCTGGAATGCTCCCTCGTTTACCAAATCCTCCGGCTTCTTCATCTCCGAAAATATCTCCAACTGCTTCACCTCCCCTTGCCTCTTCACCCAAGATAAGTGAGCTTCACGAACTTCCTAGACCCCCAGGTAGATCAGTTGTCAAGCCAACAAACTCTTCTGGATTGGTAGGCCACTCTGCTCCACTGGTCTTCAGAAATCAAGAACCTCAGGCCCATAATAAAATCCCTTCAGTGCCAACGAATTTGGCATCTCCACTTCCAATTCCACCATTGATTATTCCTAGAAGCTTCTCCATACCTTCGAGTAACCAAAGAGCAGTGACGTTGCATGTATCGAGGCATGTGGAGTCTCCTCTAGGTTCAAGCAAACCGGAAGAAGTTGCTTCACCTCCATTGACGCCAATTTCCCTAACAAACATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BAR BAR_3

Protein Analysis

627

Amino Acids

68.68

Weight (kDa)

7.78

Isoelectric Point (pI)

57.42

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
BAR_3	PF16746	29 - 231	5.9e-06	BAR domain of APPL family
BAR	PF03114	68 - 227	7.4e-07	BAR domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001635)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33490 AT2G33490 AT2G33490
fragaria_vesca	FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_6g54020 FvH4_6g54020 FvH4_6g54020
malus_domestica	MD09G1006200.v1.1 MD13G1125400.v1.1 MD16G1126200.v1.1 MD17G1010200.v1.1
prunus_persica	Prupe.1G220000_v2.0.a1 Prupe.3G310800_v2.0.a1 Prupe.3G310800_v2.0.a1
pyrus_communis	pycom111g00450 pycom13g10930 pycom13g10940 pycom16g10730 pycom17g00470
rosa_chinensis	RchiOBHm_Chr2g0176201 RchiOBHm_Chr4g0429401
rosa_laevigata	RLG00000007073 RLG00000022389
rosa_multiflora	Rmu_sc0000363.1_g000044 Rmu_sc0003708.1_g000020 Rmu_sc0009677.1_g000013 Rmu_sc0009677.1_g000014
rosa_roxburghii	Rroxscaffold_2G00076680 Rroxscaffold_5G00371040
rosa_rugosa	Rorug02G0591700 Rorug04G0235800 Rorug04G0235800
rosa_samantha	Rh2AG670300 Rh2BG681800 Rh2CG644600 Rh2DG695400 Rh4AG291500 Rh4BG297200 Rh4CG312800 Rh4DG294300
rosa_wichuraiana	Rw2G054980 Rw4G025240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	48
AccIII	TCCGGA	1 cut(s)	642
AciI	CCGC	4 cut(s)	48, 205, 261, 1149
AclWI	GGATC	1 cut(s)	1022
AcsI	RAATTY	2 cut(s)	188, 1699
AcuI	CTGAAG	5 cut(s)	584, 593, 903, 1633, 1671
AcyI	GRCGYC	1 cut(s)	1856
AdeI	CACNNNGTG	1 cut(s)	551
AfaI	GTAC	2 cut(s)	1135, 1288
AfiI	CCNNNNNNNGG	1 cut(s)	18
AflII	CTTAAG	1 cut(s)	653
AflIII	ACRYGT	2 cut(s)	679, 1875
AhlI	ACTAGT	2 cut(s)	1382, 1453
AjnI	CCWGG	2 cut(s)	1144, 1582
AjuI	GAANNNNNNNTTGG	2 cut(s)	1597, 1629
Alw21I	GWGCWC	1 cut(s)	99
Alw26I	GTCTC	5 cut(s)	369, 835, 882, 1066, 1812
AlwI	GGATC	1 cut(s)	1022
AlwNI	CAGNNNCTG	1 cut(s)	164
Aor13HI	TCCGGA	1 cut(s)	642
AoxI	GGCC	5 cut(s)	649, 868, 1372, 1627, 1668
ApeKI	GCWGC	9 cut(s)	107, 158, 161, 164, 502, 515, 608, 623, 987
ApoI	RAATTY	2 cut(s)	188, 1699
Asp700I	GAANNNNTTC	1 cut(s)	638
AspLEI	GCGC	2 cut(s)	182, 746
AspS9I	GGNCC	4 cut(s)	868, 1373, 1424, 1669
AsuHPI	GGTGA	8 cut(s)	497, 767, 938, 959, 1235, 1518, 1536, 1836
AsuII	TTCGAA	1 cut(s)	382
AvaII	GGWCC	1 cut(s)	1424
AxyI	CCTNAGG	1 cut(s)	1665
BanII	GRGCYC	1 cut(s)	99
BauI	CACGAG	1 cut(s)	519
BbsI	GAAGAC	2 cut(s)	587, 1639
Bbv12I	GWGCWC	1 cut(s)	99
BbvI	GCAGC	9 cut(s)	94, 148, 151, 170, 514, 527, 610, 620, 999
BccI	CCATC	4 cut(s)	364, 734, 1015, 1399
BcgI	CGANNNNNNTGC	2 cut(s)	1291, 1325
BciT130I	CCWGG	2 cut(s)	1146, 1584
BclI	TGATCA	2 cut(s)	523, 919
BcoDI	GTCTC	5 cut(s)	369, 835, 882, 1066, 1812
BcuI	ACTAGT	2 cut(s)	1382, 1453
BfaI	CTAG	7 cut(s)	1044, 1383, 1419, 1454, 1575, 1740, 1814
BfmI	CTRYAG	5 cut(s)	156, 168, 224, 802, 1011
BfoI	RGCGCY	1 cut(s)	183
BfrI	CTTAAG	1 cut(s)	653
BisI	GCNGC	9 cut(s)	108, 159, 162, 165, 503, 516, 609, 624, 988
BlpI	GCTNAGC	1 cut(s)	1203
BlsI	GCNGC	9 cut(s)	109, 160, 163, 166, 504, 517, 610, 625, 989
BmcAI	AGTACT	2 cut(s)	1135, 1288
Bme1390I	CCNGG	2 cut(s)	1146, 1584
Bme18I	GGWCC	1 cut(s)	1424
BmgT120I	GGNCC	4 cut(s)	868, 1373, 1424, 1669
BmiI	GGNNCC	3 cut(s)	972, 1143, 1426
BmrFI	CCNGG	2 cut(s)	1146, 1584
BmsI	GCATC	7 cut(s)	529, 845, 1176, 1293, 1354, 1442, 1715
BpiI	GAAGAC	2 cut(s)	587, 1639
Bpu10I	CCTNAGC	2 cut(s)	102, 111
Bpu1102I	GCTNAGC	1 cut(s)	1203
Bpu14I	TTCGAA	1 cut(s)	382
BpuEI	CTTGAG	2 cut(s)	683, 938
Bsa29I	ATCGAT	1 cut(s)	1301
BsaBI	GATNNNNATC	2 cut(s)	321, 1230
BsaHI	GRCGYC	1 cut(s)	1856
BsaI	GGTCTC	1 cut(s)	1066
BsaJI	CCNNGG	2 cut(s)	78, 1582
BsaWI	WCCGGW	2 cut(s)	642, 1828
BsaXI	ACNNNNNCTCC	2 cut(s)	1144, 1174
Bsc4I	CCNNNNNNNGG	1 cut(s)	18
Bse118I	RCCGGY	1 cut(s)	983
Bse1I	ACTGG	2 cut(s)	1341, 1647
Bse21I	CCTNAGG	1 cut(s)	1665
Bse3DI	GCAATG	1 cut(s)	1428
Bse8I	GATNNNNATC	2 cut(s)	321, 1230
BseAI	TCCGGA	1 cut(s)	642
BseBI	CCWGG	2 cut(s)	1146, 1584
BseCI	ATCGAT	1 cut(s)	1301
BseDI	CCNNGG	2 cut(s)	78, 1582
BseGI	GGATG	2 cut(s)	544, 1167
BseJI	GATNNNNATC	2 cut(s)	321, 1230
BseLI	CCNNNNNNNGG	1 cut(s)	18
BseMI	GCAATG	1 cut(s)	1428
BseMII	CTCAG	7 cut(s)	116, 125, 641, 1008, 1026, 1274, 1679
BseNI	ACTGG	2 cut(s)	1341, 1647
BseRI	GAGGAG	3 cut(s)	713, 1305, 1800
BseXI	GCAGC	9 cut(s)	94, 148, 151, 170, 514, 527, 610, 620, 999
BsgI	GTGCAG	2 cut(s)	23, 311
BshFI	GGCC	5 cut(s)	651, 870, 1374, 1629, 1670
BshVI	ATCGAT	1 cut(s)	1301
BsiHKAI	GWGCWC	1 cut(s)	99
BsiSI	CCGG	5 cut(s)	559, 643, 984, 1490, 1829
BslFI	GGGAC	2 cut(s)	553, 1410
BslI	CCNNNNNNNGG	1 cut(s)	18
BsmAI	GTCTC	5 cut(s)	369, 835, 882, 1066, 1812
BsmFI	GGGAC	2 cut(s)	553, 1410
BsmI	GAATGC	2 cut(s)	1409, 1470
BsnI	GGCC	5 cut(s)	651, 870, 1374, 1629, 1670
Bso31I	GGTCTC	1 cut(s)	1066
Bsp119I	TTCGAA	1 cut(s)	382
Bsp1286I	GDGCHC	1 cut(s)	99
Bsp13I	TCCGGA	1 cut(s)	642
Bsp1720I	GCTNAGC	1 cut(s)	1203
BspACI	CCGC	4 cut(s)	48, 205, 261, 1149
BspANI	GGCC	5 cut(s)	651, 870, 1374, 1629, 1670
BspCNI	CTCAG	7 cut(s)	115, 124, 640, 1007, 1027, 1273, 1678
BspDI	ATCGAT	1 cut(s)	1301
BspEI	TCCGGA	1 cut(s)	642
BspLI	GGNNCC	3 cut(s)	972, 1143, 1426
BspMAI	CTGCAG	3 cut(s)	160, 228, 1015
BspPI	GGATC	1 cut(s)	1022
BspQI	GCTCTTC	1 cut(s)	973
BspT104I	TTCGAA	1 cut(s)	382
BspTI	CTTAAG	1 cut(s)	653
BspTNI	GGTCTC	1 cut(s)	1066
BsrBI	CCGCTC	1 cut(s)	48
BsrDI	GCAATG	1 cut(s)	1428
BsrFI	RCCGGY	1 cut(s)	983
BsrI	ACTGG	2 cut(s)	1341, 1647
BssAI	RCCGGY	1 cut(s)	983
BssECI	CCNNGG	2 cut(s)	78, 1582
BssNI	GRCGYC	1 cut(s)	1856
BssSI	CACGAG	1 cut(s)	519
Bst2BI	CACGAG	1 cut(s)	519
Bst2UI	CCWGG	2 cut(s)	1146, 1584
Bst4CI	ACNGT	6 cut(s)	238, 346, 388, 549, 1059, 1141
Bst6I	CTCTTC	5 cut(s)	372, 973, 1192, 1546, 1618
BstACI	GRCGYC	1 cut(s)	1856
BstAFI	CTTAAG	1 cut(s)	653
BstAPI	GCANNNNNTGC	2 cut(s)	164, 1415
BstBI	TTCGAA	1 cut(s)	382
BstC8I	GCNNGC	5 cut(s)	99, 585, 613, 985, 1407
BstDEI	CTNAG	9 cut(s)	102, 111, 627, 994, 1035, 1203, 1260, 1401, 1665
BstENI	CCTNNNNNAGG	1 cut(s)	16
BstF5I	GGATG	2 cut(s)	544, 1167
BstH2I	RGCGCY	1 cut(s)	183
BstHHI	GCGC	2 cut(s)	182, 746
BstMAI	GTCTC	5 cut(s)	369, 835, 882, 1066, 1812
BstMWI	GCNNNNNNNGC	7 cut(s)	107, 144, 164, 170, 179, 1040, 1415
BstNI	CCWGG	2 cut(s)	1146, 1584
BstNSI	RCATGY	5 cut(s)	121, 683, 1790, 1802, 1879
BstSCI	CCNGG	2 cut(s)	1144, 1582
BstSFI	CTRYAG	5 cut(s)	156, 168, 224, 802, 1011
BstV1I	GCAGC	9 cut(s)	94, 148, 151, 170, 514, 527, 610, 620, 999
BstV2I	GAAGAC	2 cut(s)	587, 1639
BstXI	CCANNNNNNTGG	1 cut(s)	725
Bsu15I	ATCGAT	1 cut(s)	1301
Bsu36I	CCTNAGG	1 cut(s)	1665
BsuRI	GGCC	5 cut(s)	651, 870, 1374, 1629, 1670
BsuTUI	ATCGAT	1 cut(s)	1301
BtgZI	GCGATG	1 cut(s)	426
BtsCI	GGATG	2 cut(s)	544, 1167
BtsI	GCAGTG	3 cut(s)	200, 1340, 1782
BtsIMutI	CAGTG	6 cut(s)	200, 545, 1340, 1640, 1695, 1782
Cac8I	GCNNGC	5 cut(s)	99, 585, 613, 985, 1407
CaiI	CAGNNNCTG	1 cut(s)	164
CfoI	GCGC	2 cut(s)	182, 746
Cfr10I	RCCGGY	1 cut(s)	983
Cfr13I	GGNCC	4 cut(s)	868, 1373, 1424, 1669
ClaI	ATCGAT	1 cut(s)	1301
CseI	GACGC	3 cut(s)	1173, 1208, 1864
Csp6I	GTAC	2 cut(s)	1134, 1287
CviQI	GTAC	2 cut(s)	1134, 1287
DdeI	CTNAG	9 cut(s)	102, 111, 627, 994, 1035, 1203, 1260, 1401, 1665
DraIII	CACNNNGTG	1 cut(s)	551
Eam1104I	CTCTTC	5 cut(s)	372, 973, 1192, 1546, 1618
EarI	CTCTTC	5 cut(s)	372, 973, 1192, 1546, 1618
Ecl136II	GAGCTC	1 cut(s)	97
Eco147I	AGGCCT	1 cut(s)	651
Eco24I	GRGCYC	1 cut(s)	99
Eco31I	GGTCTC	1 cut(s)	1066
Eco47I	GGWCC	1 cut(s)	1424
Eco53kI	GAGCTC	1 cut(s)	97
Eco57I	CTGAAG	5 cut(s)	584, 593, 903, 1633, 1671
Eco81I	CCTNAGG	1 cut(s)	1665
EcoICRI	GAGCTC	1 cut(s)	97
EcoNI	CCTNNNNNAGG	1 cut(s)	16
EcoRI	GAATTC	1 cut(s)	188
EcoRII	CCWGG	2 cut(s)	1144, 1582
EcoT38I	GRGCYC	1 cut(s)	99
FalI	AAGNNNNNCTT	2 cut(s)	1348, 1380
FaqI	GGGAC	2 cut(s)	553, 1410
FauI	CCCGC	2 cut(s)	198, 1142
FauNDI	CATATG	2 cut(s)	873, 1084
FbaI	TGATCA	2 cut(s)	523, 919
Fnu4HI	GCNGC	9 cut(s)	108, 159, 162, 165, 503, 516, 609, 624, 988
FokI	GGATG	2 cut(s)	551, 1154
FriOI	GRGCYC	1 cut(s)	99
Fsp4HI	GCNGC	9 cut(s)	108, 159, 162, 165, 503, 516, 609, 624, 988
FspBI	CTAG	7 cut(s)	1044, 1383, 1419, 1454, 1575, 1740, 1814
GlaI	GCGC	2 cut(s)	181, 745
GluI	GCNGC	9 cut(s)	108, 159, 162, 165, 503, 516, 609, 624, 988
HaeII	RGCGCY	1 cut(s)	183
HaeIII	GGCC	5 cut(s)	651, 870, 1374, 1629, 1670
HapII	CCGG	5 cut(s)	559, 643, 984, 1490, 1829
HgaI	GACGC	3 cut(s)	1173, 1208, 1864
HhaI	GCGC	2 cut(s)	182, 746
Hin1I	GRCGYC	1 cut(s)	1856
Hin6I	GCGC	2 cut(s)	180, 744
HinP1I	GCGC	2 cut(s)	180, 744
HindIII	AAGCTT	2 cut(s)	1362, 1744
HinfI	GANTC	7 cut(s)	197, 317, 362, 770, 1103, 1279, 1805
HpaII	CCGG	5 cut(s)	559, 643, 984, 1490, 1829
HphI	GGTGA	8 cut(s)	497, 767, 938, 959, 1235, 1518, 1536, 1836
Hpy166II	GTNNAC	5 cut(s)	728, 815, 1163, 1442, 1478
Hpy188III	TCNNGA	9 cut(s)	113, 521, 643, 881, 917, 1461, 1565, 1617, 1658
Hpy8I	GTNNAC	5 cut(s)	728, 815, 1163, 1442, 1478
Hpy99I	CGWCG	1 cut(s)	346
HpyAV	CCTTC	3 cut(s)	475, 1695, 1767
HpyCH4III	ACNGT	6 cut(s)	238, 346, 388, 549, 1059, 1141
HpyCH4IV	ACGT	3 cut(s)	288, 475, 1781
HpyF10VI	GCNNNNNNNGC	7 cut(s)	107, 144, 164, 170, 179, 1040, 1415
HpyF3I	CTNAG	9 cut(s)	102, 111, 627, 994, 1035, 1203, 1260, 1401, 1665
HpySE526I	ACGT	3 cut(s)	288, 475, 1781
Hsp92I	GRCGYC	1 cut(s)	1856
HspAI	GCGC	2 cut(s)	180, 744
Kpn2I	TCCGGA	1 cut(s)	642
KroI	GCCGGC	1 cut(s)	983
KroNI	GCCGGC	1 cut(s)	985
Ksp22I	TGATCA	2 cut(s)	523, 919
LguI	GCTCTTC	1 cut(s)	973
LmnI	GCTCC	6 cut(s)	332, 700, 892, 1241, 1473, 1642
Lsp1109I	GCAGC	9 cut(s)	94, 148, 151, 170, 514, 527, 610, 620, 999
LweI	GCATC	7 cut(s)	529, 845, 1176, 1293, 1354, 1442, 1715
MaeI	CTAG	7 cut(s)	1044, 1383, 1419, 1454, 1575, 1740, 1814
MaeII	ACGT	3 cut(s)	288, 475, 1781
MaeIII	GTNAC	4 cut(s)	346, 691, 1763, 1777
MbiI	CCGCTC	1 cut(s)	48
MfeI	CAATTG	2 cut(s)	1049, 1307
MhlI	GDGCHC	1 cut(s)	99
MlyI	GAGTC	3 cut(s)	371, 1288, 1814
MmeI	TCCRAC	1 cut(s)	1541
MroI	TCCGGA	1 cut(s)	642
MroNI	GCCGGC	1 cut(s)	983
MroXI	GAANNNNTTC	1 cut(s)	638
MseI	TTAA	2 cut(s)	654, 1115
MslI	CAYNNNNRTG	3 cut(s)	90, 249, 1083
MspA1I	CMGCKG	1 cut(s)	161
MspCI	CTTAAG	1 cut(s)	653
MspI	CCGG	5 cut(s)	559, 643, 984, 1490, 1829
MspR9I	CCNGG	2 cut(s)	1146, 1584
MunI	CAATTG	2 cut(s)	1049, 1307
Mva1269I	GAATGC	2 cut(s)	1409, 1470
MvaI	CCWGG	2 cut(s)	1146, 1584
MwoI	GCNNNNNNNGC	7 cut(s)	107, 144, 164, 170, 179, 1040, 1415
NaeI	GCCGGC	1 cut(s)	985
NdeI	CATATG	2 cut(s)	873, 1084
NgoMIV	GCCGGC	1 cut(s)	983
NlaIV	GGNNCC	3 cut(s)	972, 1143, 1426
NmeAIII	GCCGAG	1 cut(s)	59
NmuCI	GTSAC	2 cut(s)	346, 1777
NspI	RCATGY	5 cut(s)	121, 683, 1790, 1802, 1879
NspV	TTCGAA	1 cut(s)	382
PceI	AGGCCT	1 cut(s)	651
PciI	ACATGT	2 cut(s)	679, 1875
PciSI	GCTCTTC	1 cut(s)	973
PctI	GAATGC	2 cut(s)	1409, 1470
PdiI	GCCGGC	1 cut(s)	985
PdmI	GAANNNNTTC	1 cut(s)	638
PfeI	GAWTC	4 cut(s)	197, 317, 770, 1103
PkrI	GCNGC	9 cut(s)	109, 160, 163, 166, 504, 517, 610, 625, 989
PleI	GAGTC	3 cut(s)	370, 1287, 1813
PpsI	GAGTC	3 cut(s)	370, 1287, 1813
PscI	ACATGT	2 cut(s)	679, 1875
Psp124BI	GAGCTC	1 cut(s)	99
Psp6I	CCWGG	2 cut(s)	1144, 1582
PspGI	CCWGG	2 cut(s)	1144, 1582
PspN4I	GGNNCC	3 cut(s)	972, 1143, 1426
PspPI	GGNCC	4 cut(s)	868, 1373, 1424, 1669
PstI	CTGCAG	3 cut(s)	160, 228, 1015
PstNI	CAGNNNCTG	1 cut(s)	164
PvuII	CAGCTG	1 cut(s)	161
RsaI	GTAC	2 cut(s)	1135, 1288
RsaNI	GTAC	2 cut(s)	1134, 1287
RseI	CAYNNNNRTG	3 cut(s)	90, 249, 1083
SacI	GAGCTC	1 cut(s)	99
SapI	GCTCTTC	1 cut(s)	973
SaqAI	TTAA	2 cut(s)	654, 1115
SatI	GCNGC	9 cut(s)	108, 159, 162, 165, 503, 516, 609, 624, 988
Sau96I	GGNCC	4 cut(s)	868, 1373, 1424, 1669
ScaI	AGTACT	2 cut(s)	1135, 1288
SchI	GAGTC	3 cut(s)	371, 1288, 1814
ScrFI	CCNGG	2 cut(s)	1146, 1584
SduI	GDGCHC	1 cut(s)	99
SfaNI	GCATC	7 cut(s)	529, 845, 1176, 1293, 1354, 1442, 1715
SfcI	CTRYAG	5 cut(s)	156, 168, 224, 802, 1011
SfuI	TTCGAA	1 cut(s)	382
SinI	GGWCC	1 cut(s)	1424
SmiMI	CAYNNNNRTG	3 cut(s)	90, 249, 1083
SmlI	CTYRAG	3 cut(s)	653, 662, 953
SmoI	CTYRAG	3 cut(s)	653, 662, 953
SpeI	ACTAGT	2 cut(s)	1382, 1453
SseBI	AGGCCT	1 cut(s)	651
SsiI	CCGC	4 cut(s)	48, 205, 261, 1149
SspI	AATATT	1 cut(s)	902
SspMI	CTAG	7 cut(s)	1044, 1383, 1419, 1454, 1575, 1740, 1814
SstI	GAGCTC	1 cut(s)	99
StuI	AGGCCT	1 cut(s)	651
StyD4I	CCNGG	2 cut(s)	1144, 1582
TaaI	ACNGT	6 cut(s)	238, 346, 388, 549, 1059, 1141
TaiI	ACGT	3 cut(s)	291, 478, 1784
TaqI	TCGA	5 cut(s)	341, 382, 1301, 1760, 1793
TatI	WGTACW	2 cut(s)	1133, 1286
TfiI	GAWTC	4 cut(s)	197, 317, 770, 1103
Tru1I	TTAA	2 cut(s)	654, 1115
Tru9I	TTAA	2 cut(s)	654, 1115
TscAI	CASTG	6 cut(s)	207, 552, 1347, 1647, 1695, 1782
TseFI	GTSAC	2 cut(s)	346, 1777
TseI	GCWGC	9 cut(s)	107, 158, 161, 164, 502, 515, 608, 623, 987
Tsp45I	GTSAC	2 cut(s)	346, 1777
TspDTI	ATGAA	8 cut(s)	201, 267, 390, 413, 429, 447, 876, 1488
TspGWI	ACGGA	3 cut(s)	710, 1084, 1347
TspRI	CASTG	6 cut(s)	207, 552, 1347, 1647, 1695, 1782
Vha464I	CTTAAG	1 cut(s)	653
VpaK11BI	GGWCC	1 cut(s)	1424
XagI	CCTNNNNNAGG	1 cut(s)	16
XapI	RAATTY	2 cut(s)	188, 1699
XceI	RCATGY	5 cut(s)	121, 683, 1790, 1802, 1879
XmnI	GAANNNNTTC	1 cut(s)	638
XspI	CTAG	7 cut(s)	1044, 1383, 1419, 1454, 1575, 1740, 1814
ZrmI	AGTACT	2 cut(s)	1135, 1288

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.