Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4C

Orthogroup ID

OG0001635

Physical Location & Seq

Genomic Coordinates Reverse (-)

57504170 .. 57510094

Gene Structure 5925 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4CG312800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1875 bp

ATGAAGACCTCTCTCCGAAAGTTGCGAGGTCTCGCACTTCACAAGCACGAAGCTAAGGACCACCGGATCGATCTTCAGCCGCATGCTCAATTGGACGAGCTCGCTCAGGCTTCTCAGGACATGCAAGATATGAGGGACTGCTATGATAGCTTACTTTCCGCAGCTGCAGCGACAGCAAATAGCGCTTATGAATTTTCAGAGTCACTGCGGGAAATGGGTGCTTGTCTTCTTCAGAAAACTGCATTGAATGATGATGAAGATGGTGGTAAAGTTCTTCTAAAGCTAGGGAAATTGCAGTATGAACTCCACAAACTTGTTGATAGCTATCGCTCTCATATATTCCAGACTATCGCAGTTCCATCAGAATCTCTTCTCAATGAACTTCAAACAGTTGAGGAGATGAAGAACCAATGCGATGAGAAAAGAGATGTATATGAGTATATGTTAAAAAGACAGAAAGAAAAAGGGAGGTTAAGAGGTGGAAAAGGAGAGACCTTTTCTGTGCAGCAAATACAACTTGCTCGTGATGAATATGATGACGAGGCAAGTTTATTTGTTTTCCGGTTGAAATCTCTGAAGCAAGGACAATCTCGTAGTCTGCTCACACAGGCGGCTCGGCATCATGCTGCTCAGTTGTGCTTCTTCAAGAAGGCACTTAGTACTGTTGAAGCAGTAGAACCACACGTTAAATTGGTAACCGAACAGCAGCATATTGATTACAAGTTCAATGGGCTAGATGATGAAGGGGATGGTGACAACGACGATGATGATAATGATGATGATGATTCCTCTTTTGTGAATGATGATGGAGAATTAAGCTTTGACTATGGACATAATGAGCGAGAGCCAGATCTTTCTACAACACGAAGCTCAATGGAGTCGGATCAGGTGGACCTCACCTTTCCCAAAATATCCAGTGTGGAAGCTATGAAGGACAGACTTTCATTTTCGTTTAAGGGTAGGGTAGTCAGCCAATCCGCCCCACTATTTCCTGAAAATAAGTTGGACCGCGCTGAAAAAATGAGACACATGCAGCCATCATTGTCCCGGAAGTTCCACTCGTATGTACTACCCACACCTGTTGATACAAACCATTCAGTTTCTACTAGACCCAGTAATTCAGTTCCCCAAACTGTACAGTCGAGTTTAAGCGGCCTAAAGCAGAATTTGTGGCATTCATCACCCTTGGAACCAAATAATGAAAAGATCATGGGAGATAAGAAAGCTGCTGGACCAACAGTAATAAATGCACAGTCAGTCCTCAGAGAGAGCAATAATAATATTGCATCCCATCGATTACCCCCTCCTCTTGCAGGTCATATGGTGTATTTAGGGATGGATCCCCTGGCTGCTTTTGATTCTAAAAAAATAAAAAGACTGGCATTTTCTGGTCCTCTGACAGGTAAGCATTCGTCTTCCAAGCCTGTGTCATTGGGATCTCACCAAATGTTTTCTGGACCTCTGTTGAGAAATCCAATACCTCAACCTCCATCAGTATCGCCTAAAGTATCTCCAAATGCTTCTCCTACTTTTATGTCCTCGCCTAAAATAAGTGAGCTTCATGAGCTTCCTAGGCCTCCTGTTGGCTTAACCTCTAAGTCTTCAAGACCTCTTGTTGGCCATTCAGCCCCCTTGGCGCCCAGAGCACAAATGCAATCTACTACAAGTAAACCACCGTTGTCACCGACAGCTGCTCCTTTGCCAAAACCTCCTCAGATCATCCCTCGTAGTTTCTCTATACCCTCAAGTAGTCCTAGAGTCGAGTTGCATGTATCTGAACCACAGGAGGCTTTTCCTGTTCCTGAAAAGTCTGAAGACGTTGCTTCACCTCCTTTGAGTCCAATAGCCTTATCTAACACACCTAAGAAATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BAR BAR_3

Protein Analysis

624

Amino Acids

69.02

Weight (kDa)

6.53

Isoelectric Point (pI)

55.77

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001635)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G33490 AT2G33490 AT2G33490
fragaria_vesca	FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_4g23100 FvH4_6g54020 FvH4_6g54020 FvH4_6g54020
malus_domestica	MD09G1006200.v1.1 MD13G1125400.v1.1 MD16G1126200.v1.1 MD17G1010200.v1.1
prunus_persica	Prupe.1G220000_v2.0.a1 Prupe.3G310800_v2.0.a1 Prupe.3G310800_v2.0.a1
pyrus_communis	pycom111g00450 pycom13g10930 pycom13g10940 pycom16g10730 pycom17g00470
rosa_chinensis	RchiOBHm_Chr2g0176201 RchiOBHm_Chr4g0429401
rosa_laevigata	RLG00000007073 RLG00000022389
rosa_multiflora	Rmu_sc0000363.1_g000044 Rmu_sc0003708.1_g000020 Rmu_sc0009677.1_g000013 Rmu_sc0009677.1_g000014
rosa_roxburghii	Rroxscaffold_2G00076680 Rroxscaffold_5G00371040
rosa_rugosa	Rorug02G0591700 Rorug04G0235800 Rorug04G0235800
rosa_samantha	Rh2AG670300 Rh2BG681800 Rh2CG644600 Rh2DG695400 Rh4AG291500 Rh4BG297200 Rh4CG312800 Rh4DG294300
rosa_wichuraiana	Rw2G054980 Rw4G025240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1304
AccB1I	GGYRCC	1 cut(s)	1636
AccII	CGCG	1 cut(s)	1011
AciI	CCGC	7 cut(s)	80, 159, 208, 611, 978, 1009, 1152
AclWI	GGATC	5 cut(s)	74, 891, 1334, 1347, 1444
AcoI	YGGCCR	1 cut(s)	1618
AcsI	RAATTY	2 cut(s)	191, 1165
AcuI	CTGAAG	4 cut(s)	59, 215, 596, 1833
AcyI	GRCGYC	1 cut(s)	1637
AfaI	GTAC	3 cut(s)	661, 1068, 1137
AfeI	AGCGCT	1 cut(s)	184
AfiI	CCNNNNNNNGG	4 cut(s)	1313, 1400, 1583, 1616
AflIII	ACRYGT	1 cut(s)	682
AgsI	TTSAA	7 cut(s)	247, 386, 568, 646, 668, 727, 1605
AjnI	CCWGG	1 cut(s)	1344
Alw21I	GWGCWC	2 cut(s)	102, 1648
Alw26I	GTCTC	3 cut(s)	35, 485, 1018
AlwI	GGATC	5 cut(s)	74, 891, 1334, 1347, 1444
Aor51HI	AGCGCT	1 cut(s)	184
AoxI	GGCC	3 cut(s)	1153, 1574, 1618
ApoI	RAATTY	2 cut(s)	191, 1165
Asp700I	GAANNNNTTC	1 cut(s)	369
AspA2I	CCTAGG	1 cut(s)	1571
AspLEI	GCGC	3 cut(s)	185, 1013, 1639
AspS9I	GGNCC	6 cut(s)	58, 892, 1006, 1232, 1391, 1457
AsuC2I	CCSGG	1 cut(s)	1048
AsuHPI	GGTGA	6 cut(s)	764, 889, 1173, 1433, 1674, 1818
AvaII	GGWCC	6 cut(s)	58, 892, 1006, 1232, 1391, 1457
AvrII	CCTAGG	1 cut(s)	1571
BalI	TGGCCA	1 cut(s)	1620
BamHI	GGATCC	1 cut(s)	1339
BanI	GGYRCC	1 cut(s)	1636
BanII	GRGCYC	1 cut(s)	102
BauI	CACGAG	1 cut(s)	522
BbsI	GAAGAC	5 cut(s)	11, 218, 1407, 1593, 1821
Bbv12I	GWGCWC	2 cut(s)	102, 1648
BccI	CCATC	8 cut(s)	254, 367, 743, 800, 1045, 1299, 1330, 1498
BciT130I	CCWGG	1 cut(s)	1346
BcnI	CCSGG	1 cut(s)	1048
BcoDI	GTCTC	3 cut(s)	35, 485, 1018
BfaI	CTAG	5 cut(s)	284, 734, 1107, 1572, 1755
BfmI	CTRYAG	1 cut(s)	165
BfoI	RGCGCY	2 cut(s)	186, 1640
BfuAI	ACCTGC	1 cut(s)	1304
BglI	GCCNNNNNGGC	1 cut(s)	1634
BglII	AGATCT	1 cut(s)	850
BlnI	CCTAGG	1 cut(s)	1571
BmcAI	AGTACT	1 cut(s)	661
Bme1390I	CCNGG	2 cut(s)	1048, 1346
Bme18I	GGWCC	6 cut(s)	58, 892, 1006, 1232, 1391, 1457
BmgT120I	GGNCC	6 cut(s)	58, 892, 1006, 1232, 1391, 1457
BmiI	GGNNCC	3 cut(s)	1191, 1341, 1638
BmrFI	CCNGG	2 cut(s)	1048, 1346
BmrI	ACTGGG	1 cut(s)	1107
BmsI	GCATC	2 cut(s)	628, 1295
BmuI	ACTGGG	1 cut(s)	1107
BpiI	GAAGAC	5 cut(s)	11, 218, 1407, 1593, 1821
Bpu10I	CCTNAGC	2 cut(s)	54, 105
BpuEI	CTTGAG	1 cut(s)	1729
BpuMI	CCSGG	1 cut(s)	1048
Bsa29I	ATCGAT	2 cut(s)	69, 1294
BsaBI	GATNNNNATC	1 cut(s)	324
BsaHI	GRCGYC	1 cut(s)	1637
BsaI	GGTCTC	2 cut(s)	35, 485
BsaJI	CCNNGG	4 cut(s)	1185, 1344, 1571, 1632
BsaWI	WCCGGW	2 cut(s)	63, 561
BsaXI	ACNNNNNCTCC	2 cut(s)	1678, 1708
Bsc4I	CCNNNNNNNGG	4 cut(s)	1313, 1400, 1583, 1616
Bse1I	ACTGG	3 cut(s)	915, 1113, 1383
Bse8I	GATNNNNATC	1 cut(s)	324
BseBI	CCWGG	1 cut(s)	1346
BseCI	ATCGAT	2 cut(s)	69, 1294
BseDI	CCNNGG	4 cut(s)	1185, 1344, 1571, 1632
BseGI	GGATG	4 cut(s)	754, 1286, 1341, 1719
BseJI	GATNNNNATC	1 cut(s)	324
BseLI	CCNNNNNNNGG	4 cut(s)	1313, 1400, 1583, 1616
BseMII	CTCAG	5 cut(s)	119, 128, 644, 1276, 1727
BseNI	ACTGG	3 cut(s)	915, 1113, 1383
BseRI	GAGGAG	3 cut(s)	410, 1296, 1701
BsgI	GTGCAG	1 cut(s)	524
Bsh1236I	CGCG	1 cut(s)	1011
BshFI	GGCC	3 cut(s)	1155, 1576, 1620
BshNI	GGYRCC	1 cut(s)	1636
BshVI	ATCGAT	2 cut(s)	69, 1294
BsiHKAI	GWGCWC	2 cut(s)	102, 1648
BsiSI	CCGG	3 cut(s)	64, 562, 1048
BslFI	GGGAC	2 cut(s)	149, 1030
BslI	CCNNNNNNNGG	4 cut(s)	1313, 1400, 1583, 1616
BsmAI	GTCTC	3 cut(s)	35, 485, 1018
BsmFI	GGGAC	2 cut(s)	149, 1030
BsmI	GAATGC	2 cut(s)	1174, 1408
BsnI	GGCC	3 cut(s)	1155, 1576, 1620
Bso31I	GGTCTC	2 cut(s)	35, 485
Bsp1286I	GDGCHC	2 cut(s)	102, 1648
Bsp1407I	TGTACA	1 cut(s)	1135
Bsp143I	GATC	8 cut(s)	66, 70, 850, 883, 1206, 1339, 1436, 1716
BspACI	CCGC	7 cut(s)	80, 159, 208, 611, 978, 1009, 1152
BspANI	GGCC	3 cut(s)	1155, 1576, 1620
BspCNI	CTCAG	5 cut(s)	118, 127, 643, 1275, 1726
BspDI	ATCGAT	2 cut(s)	69, 1294
BspFNI	CGCG	1 cut(s)	1011
BspHI	TCATGA	1 cut(s)	1561
BspLI	GGNNCC	3 cut(s)	1191, 1341, 1638
BspMAI	CTGCAG	1 cut(s)	169
BspMI	ACCTGC	1 cut(s)	1304
BspPI	GGATC	5 cut(s)	74, 891, 1334, 1347, 1444
BspT107I	GGYRCC	1 cut(s)	1636
BspTNI	GGTCTC	2 cut(s)	35, 485
BsrGI	TGTACA	1 cut(s)	1135
BsrI	ACTGG	3 cut(s)	915, 1113, 1383
BssECI	CCNNGG	4 cut(s)	1185, 1344, 1571, 1632
BssMI	GATC	8 cut(s)	66, 70, 850, 883, 1206, 1339, 1436, 1716
BssNI	GRCGYC	1 cut(s)	1637
BssSI	CACGAG	1 cut(s)	522
BssT1I	CCWWGG	3 cut(s)	1185, 1571, 1632
Bst2BI	CACGAG	1 cut(s)	522
Bst2UI	CCWGG	1 cut(s)	1346
Bst4CI	ACNGT	7 cut(s)	391, 664, 1135, 1140, 1240, 1254, 1677
Bst6I	CTCTTC	1 cut(s)	375
BstACI	GRCGYC	1 cut(s)	1637
BstAUI	TGTACA	1 cut(s)	1135
BstC8I	GCNNGC	2 cut(s)	84, 102
BstDEI	CTNAG	9 cut(s)	54, 105, 114, 630, 656, 1262, 1596, 1713, 1863
BstEII	GGTNACC	1 cut(s)	694
BstENI	CCTNNNNNAGG	2 cut(s)	1311, 1398
BstF5I	GGATG	4 cut(s)	754, 1286, 1341, 1719
BstFNI	CGCG	1 cut(s)	1011
BstH2I	RGCGCY	2 cut(s)	186, 1640
BstHHI	GCGC	3 cut(s)	185, 1013, 1639
BstKTI	GATC	8 cut(s)	69, 73, 853, 886, 1209, 1342, 1439, 1719
BstMAI	GTCTC	3 cut(s)	35, 485, 1018
BstMBI	GATC	8 cut(s)	66, 70, 850, 883, 1206, 1339, 1436, 1716
BstMWI	GCNNNNNNNGC	8 cut(s)	147, 167, 173, 182, 1564, 1573, 1634, 1643
BstNI	CCWGG	1 cut(s)	1346
BstNSI	RCATGY	4 cut(s)	86, 124, 1033, 1772
BstPI	GGTNACC	1 cut(s)	694
BstSCI	CCNGG	2 cut(s)	1046, 1344
BstSFI	CTRYAG	1 cut(s)	165
BstUI	CGCG	1 cut(s)	1011
BstV2I	GAAGAC	5 cut(s)	11, 218, 1407, 1593, 1821
BstX2I	RGATCY	3 cut(s)	850, 1339, 1436
BstYI	RGATCY	3 cut(s)	850, 1339, 1436
Bsu15I	ATCGAT	2 cut(s)	69, 1294
BsuRI	GGCC	3 cut(s)	1155, 1576, 1620
BsuTUI	ATCGAT	2 cut(s)	69, 1294
BtgZI	GCGATG	1 cut(s)	429
BtsCI	GGATG	4 cut(s)	754, 1286, 1341, 1719
BtsI	GCAGTG	1 cut(s)	203
BtsIMutI	CAGTG	2 cut(s)	203, 922
BveI	ACCTGC	1 cut(s)	1304
Cac8I	GCNNGC	2 cut(s)	84, 102
CciI	TCATGA	1 cut(s)	1561
CfoI	GCGC	3 cut(s)	185, 1013, 1639
Cfr13I	GGNCC	6 cut(s)	58, 892, 1006, 1232, 1391, 1457
ClaI	ATCGAT	2 cut(s)	69, 1294
Csp6I	GTAC	3 cut(s)	660, 1067, 1136
CspCI	CAANNNNNGTGG	2 cut(s)	1063, 1098
CviAII	CATG	7 cut(s)	83, 121, 623, 1030, 1210, 1562, 1769
CviQI	GTAC	3 cut(s)	660, 1067, 1136
DdeI	CTNAG	9 cut(s)	54, 105, 114, 630, 656, 1262, 1596, 1713, 1863
DinI	GGCGCC	1 cut(s)	1638
DpnI	GATC	8 cut(s)	68, 72, 852, 885, 1208, 1341, 1438, 1718
DpnII	GATC	8 cut(s)	66, 70, 850, 883, 1206, 1339, 1436, 1716
EaeI	YGGCCR	1 cut(s)	1618
Eam1104I	CTCTTC	1 cut(s)	375
EarI	CTCTTC	1 cut(s)	375
EciI	GGCGGA	1 cut(s)	967
Ecl136II	GAGCTC	1 cut(s)	100
Eco130I	CCWWGG	3 cut(s)	1185, 1571, 1632
Eco147I	AGGCCT	1 cut(s)	1576
Eco24I	GRGCYC	1 cut(s)	102
Eco31I	GGTCTC	2 cut(s)	35, 485
Eco47I	GGWCC	6 cut(s)	58, 892, 1006, 1232, 1391, 1457
Eco47III	AGCGCT	1 cut(s)	184
Eco53kI	GAGCTC	1 cut(s)	100
Eco57I	CTGAAG	4 cut(s)	59, 215, 596, 1833
Eco91I	GGTNACC	1 cut(s)	694
EcoICRI	GAGCTC	1 cut(s)	100
EcoNI	CCTNNNNNAGG	2 cut(s)	1311, 1398
EcoO65I	GGTNACC	1 cut(s)	694
EcoRII	CCWGG	1 cut(s)	1344
EcoT14I	CCWWGG	3 cut(s)	1185, 1571, 1632
EcoT38I	GRGCYC	1 cut(s)	102
EgeI	GGCGCC	1 cut(s)	1638
EheI	GGCGCC	1 cut(s)	1638
ErhI	CCWWGG	3 cut(s)	1185, 1571, 1632
FaeI	CATG	7 cut(s)	86, 124, 626, 1033, 1213, 1565, 1772
FaqI	GGGAC	2 cut(s)	149, 1030
FatI	CATG	7 cut(s)	82, 120, 622, 1029, 1209, 1561, 1768
FauI	CCCGC	1 cut(s)	201
FauNDI	CATATG	1 cut(s)	1320
FokI	GGATG	4 cut(s)	761, 1273, 1348, 1706
FriOI	GRGCYC	1 cut(s)	102
FspBI	CTAG	5 cut(s)	284, 734, 1107, 1572, 1755
GlaI	GCGC	3 cut(s)	184, 1012, 1638
HaeII	RGCGCY	2 cut(s)	186, 1640
HaeIII	GGCC	3 cut(s)	1155, 1576, 1620
HapII	CCGG	3 cut(s)	64, 562, 1048
HhaI	GCGC	3 cut(s)	185, 1013, 1639
Hin1I	GRCGYC	1 cut(s)	1637
Hin1II	CATG	7 cut(s)	86, 124, 626, 1033, 1213, 1565, 1772
Hin6I	GCGC	3 cut(s)	183, 1011, 1637
HinP1I	GCGC	3 cut(s)	183, 1011, 1637
HindIII	AAGCTT	1 cut(s)	817
HinfI	GANTC	7 cut(s)	200, 365, 785, 878, 1358, 1758, 1837
HpaII	CCGG	3 cut(s)	64, 562, 1048
HphI	GGTGA	6 cut(s)	764, 889, 1173, 1433, 1674, 1818
Hpy166II	GTNNAC	2 cut(s)	892, 1670
Hpy188III	TCNNGA	9 cut(s)	116, 343, 524, 646, 992, 1455, 1562, 1605, 1802
Hpy8I	GTNNAC	2 cut(s)	892, 1670
Hpy99I	CGWCG	1 cut(s)	764
HpyAV	CCTTC	3 cut(s)	643, 737, 925
HpyCH4III	ACNGT	7 cut(s)	391, 664, 1135, 1140, 1240, 1254, 1677
HpyCH4IV	ACGT	2 cut(s)	684, 1818
HpyF10VI	GCNNNNNNNGC	8 cut(s)	147, 167, 173, 182, 1564, 1573, 1634, 1643
HpyF3I	CTNAG	9 cut(s)	54, 105, 114, 630, 656, 1262, 1596, 1713, 1863
HpySE526I	ACGT	2 cut(s)	684, 1818
Hsp92I	GRCGYC	1 cut(s)	1637
Hsp92II	CATG	7 cut(s)	86, 124, 626, 1033, 1213, 1565, 1772
HspAI	GCGC	3 cut(s)	183, 1011, 1637
KasI	GGCGCC	1 cut(s)	1636
Kzo9I	GATC	8 cut(s)	66, 70, 850, 883, 1206, 1339, 1436, 1716
LmnI	GCTCC	1 cut(s)	1699
LweI	GCATC	2 cut(s)	628, 1295
MaeI	CTAG	5 cut(s)	284, 734, 1107, 1572, 1755
MaeII	ACGT	2 cut(s)	684, 1818
MaeIII	GTNAC	4 cut(s)	201, 694, 752, 1680
MalI	GATC	8 cut(s)	68, 72, 852, 885, 1208, 1341, 1438, 1718
MboI	GATC	8 cut(s)	66, 70, 850, 883, 1206, 1339, 1436, 1716
MfeI	CAATTG	1 cut(s)	89
MflI	RGATCY	3 cut(s)	850, 1339, 1436
MhlI	GDGCHC	2 cut(s)	102, 1648
MlsI	TGGCCA	1 cut(s)	1620
MluCI	AATT	7 cut(s)	89, 191, 290, 689, 812, 1117, 1165
MluNI	TGGCCA	1 cut(s)	1620
Mly113I	GGCGCC	1 cut(s)	1637
MlyI	GAGTC	4 cut(s)	209, 887, 1767, 1846
MmeI	TCCRAC	2 cut(s)	861, 984
Mox20I	TGGCCA	1 cut(s)	1620
MroXI	GAANNNNTTC	1 cut(s)	369
MscI	TGGCCA	1 cut(s)	1620
MseI	TTAA	7 cut(s)	446, 473, 687, 815, 954, 1148, 1589
MslI	CAYNNNNRTG	1 cut(s)	1062
Msp20I	TGGCCA	1 cut(s)	1620
MspA1I	CMGCKG	2 cut(s)	164, 1691
MspI	CCGG	3 cut(s)	64, 562, 1048
MspR9I	CCNGG	2 cut(s)	1048, 1346
MunI	CAATTG	1 cut(s)	89
Mva1269I	GAATGC	2 cut(s)	1174, 1408
MvaI	CCWGG	1 cut(s)	1346
MvnI	CGCG	1 cut(s)	1011
MwoI	GCNNNNNNNGC	8 cut(s)	147, 167, 173, 182, 1564, 1573, 1634, 1643
NarI	GGCGCC	1 cut(s)	1637
NciI	CCSGG	1 cut(s)	1048
NdeI	CATATG	1 cut(s)	1320
NdeII	GATC	8 cut(s)	66, 70, 850, 883, 1206, 1339, 1436, 1716
NlaIII	CATG	7 cut(s)	86, 124, 626, 1033, 1213, 1565, 1772
NlaIV	GGNNCC	3 cut(s)	1191, 1341, 1638
NmeAIII	GCCGAG	1 cut(s)	595
NmuCI	GTSAC	3 cut(s)	201, 752, 1680
NspI	RCATGY	4 cut(s)	86, 124, 1033, 1772
PaeI	GCATGC	1 cut(s)	86
PagI	TCATGA	1 cut(s)	1561
PceI	AGGCCT	1 cut(s)	1576
PctI	GAATGC	2 cut(s)	1174, 1408
PdmI	GAANNNNTTC	1 cut(s)	369
PfeI	GAWTC	3 cut(s)	365, 785, 1358
PfoI	TCCNGGA	1 cut(s)	1046
PleI	GAGTC	4 cut(s)	208, 886, 1766, 1845
PluTI	GGCGCC	1 cut(s)	1640
PpsI	GAGTC	4 cut(s)	208, 886, 1766, 1845
Psp124BI	GAGCTC	1 cut(s)	102
Psp6I	CCWGG	1 cut(s)	1344
PspEI	GGTNACC	1 cut(s)	694
PspGI	CCWGG	1 cut(s)	1344
PspN4I	GGNNCC	3 cut(s)	1191, 1341, 1638
PspPI	GGNCC	6 cut(s)	58, 892, 1006, 1232, 1391, 1457
PstI	CTGCAG	1 cut(s)	169
PsuI	RGATCY	3 cut(s)	850, 1339, 1436
PvuII	CAGCTG	2 cut(s)	164, 1691
RsaI	GTAC	3 cut(s)	661, 1068, 1137
RsaNI	GTAC	3 cut(s)	660, 1067, 1136
RseI	CAYNNNNRTG	1 cut(s)	1062
SacI	GAGCTC	1 cut(s)	102
SaqAI	TTAA	7 cut(s)	446, 473, 687, 815, 954, 1148, 1589
Sau3AI	GATC	8 cut(s)	66, 70, 850, 883, 1206, 1339, 1436, 1716
Sau96I	GGNCC	6 cut(s)	58, 892, 1006, 1232, 1391, 1457
ScaI	AGTACT	1 cut(s)	661
SchI	GAGTC	4 cut(s)	209, 887, 1767, 1846
ScrFI	CCNGG	2 cut(s)	1048, 1346
SduI	GDGCHC	2 cut(s)	102, 1648
SfaNI	GCATC	2 cut(s)	628, 1295
SfcI	CTRYAG	1 cut(s)	165
SfoI	GGCGCC	1 cut(s)	1638
SinI	GGWCC	6 cut(s)	58, 892, 1006, 1232, 1391, 1457
SmiMI	CAYNNNNRTG	1 cut(s)	1062
SmlI	CTYRAG	1 cut(s)	1744
SmoI	CTYRAG	1 cut(s)	1744
SphI	GCATGC	1 cut(s)	86
Sse9I	AATT	7 cut(s)	89, 191, 290, 689, 812, 1117, 1165
SseBI	AGGCCT	1 cut(s)	1576
SsiI	CCGC	7 cut(s)	80, 159, 208, 611, 978, 1009, 1152
SspDI	GGCGCC	1 cut(s)	1636
SspI	AATATT	1 cut(s)	1282
SspMI	CTAG	5 cut(s)	284, 734, 1107, 1572, 1755
SstI	GAGCTC	1 cut(s)	102
StuI	AGGCCT	1 cut(s)	1576
StyD4I	CCNGG	2 cut(s)	1046, 1344
StyI	CCWWGG	3 cut(s)	1185, 1571, 1632
TaaI	ACNGT	7 cut(s)	391, 664, 1135, 1140, 1240, 1254, 1677
TaiI	ACGT	2 cut(s)	687, 1821
TaqI	TCGA	4 cut(s)	69, 1142, 1294, 1761
TasI	AATT	7 cut(s)	89, 191, 290, 689, 812, 1117, 1165
TatI	WGTACW	3 cut(s)	659, 1066, 1135
TauI	GCSGC	3 cut(s)	82, 614, 1155
TfiI	GAWTC	3 cut(s)	365, 785, 1358
Tru1I	TTAA	7 cut(s)	446, 473, 687, 815, 954, 1148, 1589
Tru9I	TTAA	7 cut(s)	446, 473, 687, 815, 954, 1148, 1589
TscAI	CASTG	2 cut(s)	210, 922
TseFI	GTSAC	3 cut(s)	201, 752, 1680
Tsp45I	GTSAC	3 cut(s)	201, 752, 1680
TspRI	CASTG	2 cut(s)	210, 922
VpaK11BI	GGWCC	6 cut(s)	58, 892, 1006, 1232, 1391, 1457
XagI	CCTNNNNNAGG	2 cut(s)	1311, 1398
XapI	RAATTY	2 cut(s)	191, 1165
XceI	RCATGY	4 cut(s)	86, 124, 1033, 1772
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1451
XmaJI	CCTAGG	1 cut(s)	1571
XmnI	GAANNNNTTC	1 cut(s)	369
XspI	CTAG	5 cut(s)	284, 734, 1107, 1572, 1755
ZrmI	AGTACT	1 cut(s)	661

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.