FvH4_4g28060

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Forward (+)
28822492 .. 28824499
2008 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g28060.t1

Sequence Viewer

Length: 1056 bp
ATGCCAGTACCAAATCATCACCGCCGCCTCTGCACATTCCTCGTCCTCGTCCTCGCCGCCGCAGTACAATTCCCGGCGGATTCCGCCGCCGTCGAGCTCCCGAAGTTCCGAGAAGCGCCTGCATTTCGGAATGGCCGCGGGTGCCGCCGGACGGCGTGGTCCTCGGTGGACGCGCACTCCCACAACCCCTCCATCATCCACATCGCCATGACGTTAGACTCCACCTACCTCCGCGGCTCCATAGCCGGCGTCTTCTCCGTCCTCCAGCACGCCACGTGTCCCGAGAACATCGTCTTCCACTTCATCGCCACGCGCCACCGCCGCGACGACCTCCGCCGCGTCATCACCGCCACCTTCCCTTACCTCAACTTCCGCCTCTACCACTTCGACTGCAACCTCGTGAGGGGAAAGATCTCGTACTCGGTGCGACGCGCGCTGGACCAGCCGCTCAACTACGCGCGCATCTACCTCGCCGATCTCCTCCCCTCCGGCGTCCGCCGCATCATCTACTTCGACTCCGACCTGATCGTCGTCGACGACGTGGCCAAGCTCTGGCGCATCGACCTCGGCCGCCGCGTCCTCGGCGCGCCGGAGTACTGCCACGCCAACTTCACCAACTACTTCACCGCGAAATTCTGGTCGAACGCGGCGTTCGCGGCGGAGTTCTCGGGGCGGAGCGCGTGCTACTTCAACACCGGAGTGATGGTGATCGATCTGTGGAAATGGAGAGAAGGCAGGTACACGGAGAAGCTGGAGCATTGGATGAGCGTGCAGAAACGGCACCGTATTTACGAGCTGGGTTCGTTGCCGCCGTTTCTGTTGGTTTTCGCGGGTGACGTGGAGGGTGTGGAGCACAGGTGGAACCAGCACGGACTCGGCGGTGACAACCTGGAGGGGCTATGTAGGGACCTCCACCCTGGCCCGGTGAGCCTGCTCCATTGGAGCGGTAAGGGCAAGCCATGGCTCCGATTGGACTCCAAGCGGCCGTGCCCCTTGGATAGCCTGTGGGCCCCCTATGACCTCGTTCGACATTCCTCTCTCTTCGCTGATAGCTGA

Protein Analysis

352

Amino Acids

40.22

Weight (kDa)

9.28

Isoelectric Point (pI)

53.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_8 PF01501 67 - 323 1.8e-52 Glycosyl transferase family 8
Glyco_transf_24 PF18404 151 - 252 3.1e-09 Glucosyltransferase 24
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 157, 527
Acc36I ACCTGC 1 cut(s) 726
AccB1I GGYRCC 2 cut(s) 141, 780
AccB7I CCANNNNNTGG 1 cut(s) 552
AccBSI CCGCTC 2 cut(s) 448, 945
AccI GTMKAC 1 cut(s) 534
AcoI YGGCCR 4 cut(s) 133, 543, 568, 983
AcsI RAATTY 1 cut(s) 632
AcvI CACGTG 1 cut(s) 276
AcyI GRCGYC 2 cut(s) 249, 492
AfaI GTAC 5 cut(s) 9, 66, 419, 596, 740
AfiI CCNNNNNNNGG 4 cut(s) 151, 403, 552, 922
AflIII ACRYGT 1 cut(s) 275
AgsI TTSAA 1 cut(s) 691
AjiI CACGTC 2 cut(s) 541, 838
AjnI CCWGG 2 cut(s) 888, 916
AleI CACNNNNGTG 1 cut(s) 698
AluBI AGCT 5 cut(s) 97, 550, 751, 796, 1053
AluI AGCT 5 cut(s) 97, 550, 751, 796, 1053
Alw21I GWGCWC 2 cut(s) 99, 855
Ama87I CYCGRG 2 cut(s) 281, 667
AoxI GGCC 6 cut(s) 133, 543, 568, 919, 983, 1008
ApaI GGGCCC 1 cut(s) 1012
ApoI RAATTY 1 cut(s) 632
ArsI GACNNNNNNTTYG 2 cut(s) 623, 655
AscI GGCGCGCC 1 cut(s) 585
AspS9I GGNCC 6 cut(s) 159, 439, 907, 920, 1008, 1009
AsuC2I CCSGG 2 cut(s) 74, 923
AsuHPI GGTGA 8 cut(s) 11, 337, 604, 616, 718, 845, 893, 937
AvaI CYCGRG 2 cut(s) 281, 667
AvaII GGWCC 3 cut(s) 159, 439, 907
BaeGI GKGCMC 2 cut(s) 992, 1012
BalI TGGCCA 1 cut(s) 545
BanI GGYRCC 2 cut(s) 141, 780
BanII GRGCYC 2 cut(s) 99, 1012
BauI CACGAG 1 cut(s) 398
BbrPI CACGTG 1 cut(s) 276
BbsI GAAGAC 2 cut(s) 244, 286
Bbv12I GWGCWC 2 cut(s) 99, 855
BccI CCATC 2 cut(s) 200, 697
BceAI ACGGC 5 cut(s) 74, 168, 794, 796, 970
BcgI CGANNNNNNTGC 6 cut(s) 22, 56, 451, 485, 547, 581
BciT130I CCWGG 2 cut(s) 890, 918
BcnI CCSGG 2 cut(s) 74, 923
BfoI RGCGCY 1 cut(s) 119
BfuAI ACCTGC 1 cut(s) 726
BglII AGATCT 1 cut(s) 411
BmcAI AGTACT 1 cut(s) 596
Bme1390I CCNGG 4 cut(s) 74, 890, 918, 923
Bme18I GGWCC 3 cut(s) 159, 439, 907
BmeT110I CYCGRG 2 cut(s) 281, 667
BmgBI CACGTC 2 cut(s) 541, 838
BmgT120I GGNCC 6 cut(s) 159, 439, 907, 920, 1008, 1009
BmiI GGNNCC 8 cut(s) 143, 238, 782, 863, 908, 965, 1010, 1011
BmrFI CCNGG 4 cut(s) 74, 890, 918, 923
BmsI GCATC 3 cut(s) 471, 510, 567
BpiI GAAGAC 2 cut(s) 244, 286
BpmI CTGGAG 3 cut(s) 248, 773, 911
BpuMI CCSGG 2 cut(s) 74, 923
Bsa29I ATCGAT 1 cut(s) 711
BsaAI YACGTR 1 cut(s) 276
BsaBI GATNNNNATC 1 cut(s) 707
BsaHI GRCGYC 2 cut(s) 249, 492
BsaJI CCNNGG 8 cut(s) 136, 162, 232, 565, 580, 916, 959, 993
BsaWI WCCGGW 1 cut(s) 695
Bsc4I CCNNNNNNNGG 4 cut(s) 151, 403, 552, 922
Bse118I RCCGGY 1 cut(s) 245
Bse1I ACTGG 1 cut(s) 5
Bse8I GATNNNNATC 1 cut(s) 707
BseBI CCWGG 2 cut(s) 890, 918
BseCI ATCGAT 1 cut(s) 711
BseDI CCNNGG 8 cut(s) 136, 162, 232, 565, 580, 916, 959, 993
BseGI GGATG 2 cut(s) 195, 768
BseJI GATNNNNATC 1 cut(s) 707
BseLI CCNNNNNNNGG 4 cut(s) 151, 403, 552, 922
BseNI ACTGG 1 cut(s) 5
BsePI GCGCGC 3 cut(s) 432, 458, 585
BseRI GAGGAG 1 cut(s) 470
BseSI GKGCMC 2 cut(s) 992, 1012
BseX3I CGGCCG 2 cut(s) 568, 983
BseYI CCCAGC 1 cut(s) 796
BsgI GTGCAG 2 cut(s) 16, 791
Bsh1285I CGRYCG 2 cut(s) 571, 986
BshFI GGCC 6 cut(s) 135, 545, 570, 921, 985, 1010
BshNI GGYRCC 2 cut(s) 141, 780
BshVI ATCGAT 1 cut(s) 711
BsiEI CGRYCG 2 cut(s) 571, 986
BsiHKAI GWGCWC 2 cut(s) 99, 855
BsiHKCI CYCGRG 2 cut(s) 281, 667
BsiSI CCGG 7 cut(s) 74, 148, 246, 489, 590, 696, 923
BslFI GGGAC 2 cut(s) 264, 920
BslI CCNNNNNNNGG 4 cut(s) 151, 403, 552, 922
BsmFI GGGAC 2 cut(s) 264, 920
BsnI GGCC 6 cut(s) 135, 545, 570, 921, 985, 1010
BsoBI CYCGRG 2 cut(s) 281, 667
Bsp120I GGGCCC 1 cut(s) 1008
Bsp1286I GDGCHC 4 cut(s) 99, 855, 992, 1012
Bsp143I GATC 5 cut(s) 411, 475, 525, 708, 712
Bsp19I CCATGG 1 cut(s) 959
BspANI GGCC 6 cut(s) 135, 545, 570, 921, 985, 1010
BspDI ATCGAT 1 cut(s) 711
BspLI GGNNCC 8 cut(s) 143, 238, 782, 863, 908, 965, 1010, 1011
BspMI ACCTGC 1 cut(s) 726
BspT107I GGYRCC 2 cut(s) 141, 780
BsrBI CCGCTC 2 cut(s) 448, 945
BsrFI RCCGGY 1 cut(s) 245
BsrI ACTGG 1 cut(s) 5
BssAI RCCGGY 1 cut(s) 245
BssECI CCNNGG 8 cut(s) 136, 162, 232, 565, 580, 916, 959, 993
BssHII GCGCGC 3 cut(s) 432, 458, 585
BssMI GATC 5 cut(s) 411, 475, 525, 708, 712
BssNI GRCGYC 2 cut(s) 249, 492
BssSI CACGAG 1 cut(s) 398
BssT1I CCWWGG 2 cut(s) 959, 993
Bst2BI CACGAG 1 cut(s) 398
Bst2UI CCWGG 2 cut(s) 890, 918
Bst4CI ACNGT 1 cut(s) 785
Bst6I CTCTTC 1 cut(s) 1046
BstACI GRCGYC 2 cut(s) 249, 492
BstBAI YACGTR 1 cut(s) 276
BstDSI CCRYGG 3 cut(s) 136, 232, 959
BstF5I GGATG 2 cut(s) 195, 768
BstH2I RGCGCY 1 cut(s) 119
BstKTI GATC 5 cut(s) 414, 478, 528, 711, 715
BstMBI GATC 5 cut(s) 411, 475, 525, 708, 712
BstMCI CGRYCG 2 cut(s) 571, 986
BstNI CCWGG 2 cut(s) 890, 918
BstSCI CCNGG 4 cut(s) 72, 888, 916, 921
BstSLI GKGCMC 2 cut(s) 992, 1012
BstV2I GAAGAC 2 cut(s) 244, 286
BstX2I RGATCY 1 cut(s) 411
BstYI RGATCY 1 cut(s) 411
BstZI CGGCCG 2 cut(s) 568, 983
Bsu15I ATCGAT 1 cut(s) 711
BsuRI GGCC 6 cut(s) 135, 545, 570, 921, 985, 1010
BsuTUI ATCGAT 1 cut(s) 711
BtgI CCRYGG 3 cut(s) 136, 232, 959
BtgZI GCGATG 2 cut(s) 187, 289
BtrI CACGTC 2 cut(s) 541, 838
BtsCI GGATG 2 cut(s) 195, 768
BveI ACCTGC 1 cut(s) 726
Cfr10I RCCGGY 1 cut(s) 245
Cfr13I GGNCC 6 cut(s) 159, 439, 907, 920, 1008, 1009
Cfr42I CCGCGG 2 cut(s) 139, 235
ClaI ATCGAT 1 cut(s) 711
CseI GACGC 6 cut(s) 179, 238, 328, 438, 481, 565
Csp6I GTAC 5 cut(s) 8, 65, 418, 595, 739
CviAII CATG 2 cut(s) 208, 960
CviQI GTAC 5 cut(s) 8, 65, 418, 595, 739
DpnI GATC 5 cut(s) 413, 477, 527, 710, 714
DpnII GATC 5 cut(s) 411, 475, 525, 708, 712
DrdI GACNNNNNNGTC 2 cut(s) 157, 527
DseDI GACNNNNNNGTC 2 cut(s) 157, 527
EaeI YGGCCR 4 cut(s) 133, 543, 568, 983
EagI CGGCCG 2 cut(s) 568, 983
Eam1104I CTCTTC 1 cut(s) 1046
EarI CTCTTC 1 cut(s) 1046
EciI GGCGGA 7 cut(s) 73, 92, 323, 362, 485, 674, 688
Ecl136II GAGCTC 1 cut(s) 97
EclXI CGGCCG 2 cut(s) 568, 983
Eco130I CCWWGG 2 cut(s) 959, 993
Eco24I GRGCYC 2 cut(s) 99, 1012
Eco47I GGWCC 3 cut(s) 159, 439, 907
Eco52I CGGCCG 2 cut(s) 568, 983
Eco53kI GAGCTC 1 cut(s) 97
Eco72I CACGTG 1 cut(s) 276
Eco88I CYCGRG 2 cut(s) 281, 667
EcoICRI GAGCTC 1 cut(s) 97
EcoO109I RGGNCCY 2 cut(s) 907, 1009
EcoRII CCWGG 2 cut(s) 888, 916
EcoT14I CCWWGG 2 cut(s) 959, 993
EcoT38I GRGCYC 2 cut(s) 99, 1012
ErhI CCWWGG 2 cut(s) 959, 993
FaeI CATG 2 cut(s) 211, 963
FaiI YATR 5 cut(s) 209, 242, 901, 961, 1017
FaqI GGGAC 2 cut(s) 264, 920
FatI CATG 2 cut(s) 207, 959
FauI CCCGC 2 cut(s) 131, 823
FblI GTMKAC 1 cut(s) 534
FokI GGATG 2 cut(s) 182, 775
FriOI GRGCYC 2 cut(s) 99, 1012
GsaI CCCAGC 1 cut(s) 800
GsuI CTGGAG 3 cut(s) 248, 773, 911
HaeII RGCGCY 1 cut(s) 119
HaeIII GGCC 6 cut(s) 135, 545, 570, 921, 985, 1010
HapII CCGG 7 cut(s) 74, 148, 246, 489, 590, 696, 923
HgaI GACGC 6 cut(s) 179, 238, 328, 438, 481, 565
Hin1I GRCGYC 2 cut(s) 249, 492
Hin1II CATG 2 cut(s) 211, 963
HincII GTYRAC 1 cut(s) 535
HindII GTYRAC 1 cut(s) 535
HinfI GANTC 5 cut(s) 80, 218, 515, 873, 974
HpaII CCGG 7 cut(s) 74, 148, 246, 489, 590, 696, 923
HphI GGTGA 8 cut(s) 11, 337, 604, 616, 718, 845, 893, 937
Hpy166II GTNNAC 3 cut(s) 169, 535, 741
Hpy188I TCNGA 4 cut(s) 110, 129, 520, 968
Hpy188III TCNNGA 3 cut(s) 100, 281, 400
Hpy8I GTNNAC 3 cut(s) 169, 535, 741
Hpy99I CGWCG 7 cut(s) 95, 329, 432, 533, 536, 539, 542
HpyAV CCTTC 2 cut(s) 364, 725
HpyCH4III ACNGT 1 cut(s) 785
HpyCH4IV ACGT 4 cut(s) 212, 275, 540, 837
HpyCH4V TGCA 4 cut(s) 33, 122, 393, 772
HpySE526I ACGT 4 cut(s) 212, 275, 540, 837
Hsp92I GRCGYC 2 cut(s) 249, 492
Hsp92II CATG 2 cut(s) 211, 963
KroI GCCGGC 1 cut(s) 245
KroNI GCCGGC 1 cut(s) 247
KspI CCGCGG 2 cut(s) 139, 235
Kzo9I GATC 5 cut(s) 411, 475, 525, 708, 712
LmnI GCTCC 8 cut(s) 102, 242, 675, 754, 850, 939, 942, 969
LweI GCATC 3 cut(s) 471, 510, 567
MaeII ACGT 4 cut(s) 212, 275, 540, 837
MaeIII GTNAC 2 cut(s) 833, 881
MalI GATC 5 cut(s) 413, 477, 527, 710, 714
MbiI CCGCTC 2 cut(s) 448, 945
MboI GATC 5 cut(s) 411, 475, 525, 708, 712
MboII GAAGA 3 cut(s) 244, 286, 1033
MflI RGATCY 1 cut(s) 411
MhlI GDGCHC 4 cut(s) 99, 855, 992, 1012
MlsI TGGCCA 1 cut(s) 545
MluCI AATT 2 cut(s) 68, 632
MluNI TGGCCA 1 cut(s) 545
MlyI GAGTC 4 cut(s) 212, 509, 867, 968
MmeI TCCRAC 1 cut(s) 543
Mox20I TGGCCA 1 cut(s) 545
MroNI GCCGGC 1 cut(s) 245
MscI TGGCCA 1 cut(s) 545
MslI CAYNNNNRTG 2 cut(s) 206, 698
Msp20I TGGCCA 1 cut(s) 545
MspA1I CMGCKG 2 cut(s) 138, 234
MspI CCGG 7 cut(s) 74, 148, 246, 489, 590, 696, 923
MspR9I CCNGG 4 cut(s) 74, 890, 918, 923
MvaI CCWGG 2 cut(s) 890, 918
NaeI GCCGGC 1 cut(s) 247
NciI CCSGG 2 cut(s) 74, 923
NcoI CCATGG 1 cut(s) 959
NdeII GATC 5 cut(s) 411, 475, 525, 708, 712
NgoMIV GCCGGC 1 cut(s) 245
NlaIII CATG 2 cut(s) 211, 963
NlaIV GGNNCC 8 cut(s) 143, 238, 782, 863, 908, 965, 1010, 1011
NmeAIII GCCGAG 3 cut(s) 546, 561, 855
NmuCI GTSAC 2 cut(s) 833, 881
OliI CACNNNNGTG 1 cut(s) 698
PalAI GGCGCGCC 1 cut(s) 585
PauI GCGCGC 3 cut(s) 432, 458, 585
PcsI WCGNNNNNNNCGW 6 cut(s) 534, 537, 573, 647, 809, 834
PdiI GCCGGC 1 cut(s) 247
PfeI GAWTC 1 cut(s) 80
PflMI CCANNNNNTGG 1 cut(s) 552
PleI GAGTC 4 cut(s) 212, 509, 867, 968
PmaCI CACGTG 1 cut(s) 276
PmlI CACGTG 1 cut(s) 276
PpsI GAGTC 4 cut(s) 212, 509, 867, 968
Ppu21I YACGTR 1 cut(s) 276
PpuMI RGGWCCY 1 cut(s) 907
Psp124BI GAGCTC 1 cut(s) 99
Psp5II RGGWCCY 1 cut(s) 907
Psp6I CCWGG 2 cut(s) 888, 916
PspCI CACGTG 1 cut(s) 276
PspFI CCCAGC 1 cut(s) 796
PspGI CCWGG 2 cut(s) 888, 916
PspN4I GGNNCC 8 cut(s) 143, 238, 782, 863, 908, 965, 1010, 1011
PspOMI GGGCCC 1 cut(s) 1008
PspPI GGNCC 6 cut(s) 159, 439, 907, 920, 1008, 1009
PspPPI RGGWCCY 1 cut(s) 907
PsuI RGATCY 1 cut(s) 411
PteI GCGCGC 3 cut(s) 432, 458, 585
RsaI GTAC 5 cut(s) 9, 66, 419, 596, 740
RsaNI GTAC 5 cut(s) 8, 65, 418, 595, 739
RseI CAYNNNNRTG 2 cut(s) 206, 698
SacI GAGCTC 1 cut(s) 99
SacII CCGCGG 2 cut(s) 139, 235
SalI GTCGAC 1 cut(s) 533
Sau3AI GATC 5 cut(s) 411, 475, 525, 708, 712
Sau96I GGNCC 6 cut(s) 159, 439, 907, 920, 1008, 1009
ScaI AGTACT 1 cut(s) 596
SchI GAGTC 4 cut(s) 212, 509, 867, 968
ScrFI CCNGG 4 cut(s) 74, 890, 918, 923
SduI GDGCHC 4 cut(s) 99, 855, 992, 1012
SfaNI GCATC 3 cut(s) 471, 510, 567
Sfr303I CCGCGG 2 cut(s) 139, 235
SgrBI CCGCGG 2 cut(s) 139, 235
SgrDI CGTCGACG 1 cut(s) 533
SgsI GGCGCGCC 1 cut(s) 585
SinI GGWCC 3 cut(s) 159, 439, 907
SmiMI CAYNNNNRTG 2 cut(s) 206, 698
Sse9I AATT 2 cut(s) 68, 632
SstI GAGCTC 1 cut(s) 99
StyD4I CCNGG 4 cut(s) 72, 888, 916, 921
StyI CCWWGG 2 cut(s) 959, 993
TaaI ACNGT 1 cut(s) 785
TaiI ACGT 4 cut(s) 215, 278, 543, 840
TaqI TCGA 8 cut(s) 93, 387, 513, 534, 561, 641, 711, 1027
TasI AATT 2 cut(s) 68, 632
TatI WGTACW 2 cut(s) 64, 594
TfiI GAWTC 1 cut(s) 80
TseFI GTSAC 2 cut(s) 833, 881
Tsp45I GTSAC 2 cut(s) 833, 881
TspDTI ATGAA 1 cut(s) 292
TspGWI ACGGA 3 cut(s) 247, 758, 885
Van91I CCANNNNNTGG 1 cut(s) 552
VpaK11BI GGWCC 3 cut(s) 159, 439, 907
XapI RAATTY 1 cut(s) 632
XmiI GTMKAC 1 cut(s) 534
ZrmI AGTACT 1 cut(s) 596
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.