Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0003359

Physical Location & Seq

Genomic Coordinates Reverse (-)

32293920 .. 32297462

Gene Structure 3543 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g34620.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2079 bp

ATGATCCATAAATTAAATTCGGGTCGTCGGATCCTAACCTACCCGGCGGTGCATCCCAGCGAGGTCATAGCTCCCCGGACGCTTCTGCTCTCTCTCATCGCTCTCACCCACAACATCTGCGACTACAAATCCAAATACATCGCCAGCAATCAACGAAACGCCTTGGAAGCGATCCGCCAGATCGGAGTGGTGCGGGTTTTTCTCGAAGAGATACGGGACTGGCTTCCGAGTAGTCTTCCGGACTCGACCGTTTTGAGCTTCTCGGAGCTCCATTTGAGTTTCCAGAAGCTTCTGTACTTGCTGGAGGACTGTACCCGGGACGACGCCCGGGTATGGATGCTGATGAACTCGGAGCGGGTCGCGGACCAGTTCCGGGTCTTGATTCGGTCCATGGCCACGGCTCTTGATATTCTTCCTTTTGATTCGATCCACGTGGCGGTTGAGGTGAAGGAGCAGGTGGAGTTGGTGATGCGGCAAGCGCGGCGGGTGAGGTTTGATGTTGACCCGGAGGATAAACGGGTCGTGGAGGCGGTTAAGAAGGTTTTGATCGGGTTTGAGAAGCGGGTCGACCCGGATAGGAGTGAGCTGAAGCTGGTACTTGATCATGTTGGTATTAGAAAATGGAGCAGGTGCGAGAAGGAGGTGAGATTCTTGGAATCTGAAATCGGGTTTGAGAATCTGAGAGAGGAGAAGAGAGAGGTGAGCTTGCTGAGCAGCCTGATCGGGTTGTTGTGCTATTGCCGGTGCGTGATGTTCGACACCGTAGACGGGTTTCCCGCCCCAAGACCCGAGGCCAATAGCCGCAGCGAGGTGGTGAGTTGCCTGAATTGGGAGGATTTCCGGTGTCCGATATCGCTGGAGATCATGACGGAACCGGTGACAATAGCGACGGGTCAGAGCTATGACCGGGGATCCATTATGAAGTGGTTTAGAGGTGGAAAGGCTGTTTGTCCGAAAACAGGGGAGAAGCTGAAGAGCAGGGAGGTGGTGCCTAATTTGGCGCTGAAGAGGTTGATTCAGCAGTACTGCTCGGAGAATGGGATTCCTTTTGGTGATTCCGGCCATCGGAGTCGCGACATTGGGAGGACTATAGCTGCAGGCAGCTTGGCAGCTGAGGAGGTCATGAAAATGTTGTCGAAATATCTCAGCGCAAGTATTGCGGCGGGGACAATGGAAGAGAGGAGCAAGGCTGCCTATGAAATTCGGATTCTTTCGAAAACAAGCATTTTTAATAGGTCTTGTTTGGTGGAAGCTGGGTTGGTTCCGCATTTGCTGAAGATGTTGGCTTCTGCAGATTCGGAGAGGCAGGAGAATGCAGTTGCAGGGTTGTTGAATCTGTCAAAGCATTCAAAAGGGAAAGCTGCCATTGTCGAAAATGGGGGTGTGGATTTGGTTGTGGATGTTTTGAAGGAGGGTCTGAAAGTAGAGGCTTGCCAGCATGCTGCTGGGACATTGTTTTATCTTGCTTCGGTTGAGGAGTACCGGATATTGATCGGAGAAAACCCGAGGGCCATACCGGCTTTGAGGGAGCTGATCAAGAACGGTTCTGATCGCGGCAAGAAGAATGCATTGGTTGCTATTTACGGGCTGCTTACACACCCTGCAAATCATAGAAGGGTGATAGCAGCTGGGGTGGTTCCTTTGCTGTTTGAAATACTAACATCTGTTGACAGTGAAGCTCTTGTGACGGATTCTCTAGCAATTCTCGCAACTCTGGCTGAGAAACCTGAAGGAGCAGTTGCAATTTCGCGTTGCAGGGCTTTGGATTCGATCATGGGGATTCTGAATTCTTTGACTTCAAGGGCAGCAAAGGAGTTCTGTGTGTCTTTGTTGCTGTCTCTTAGTACAAATGGTGGCCACAATGTGGTTGCTCTTCTGGTTAAGAGCCCTTCTCTTATGGGATGTTTGTATTCTCAACTTAGTGAAGGCACATCTAGAGCAAGCAAAAGGGCCAGTGCTCTCATCAAGCTCCTCCATGAATTCCATGAAACAAGATCCTCTGGTCCAGTCAATCGAGTTCTTCCACAGGAGCGATTTGTTCACGTTAGTTTCAAGTCAGGACCTGGTGCTTTCAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009787 GO:0009966 GO:0009987 GO:0010029 GO:0010119 GO:0010646 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0023051 GO:0032446 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048580 GO:0048583 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0140096 GO:1900140 GO:1901419 GO:1901564 GO:1905957 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

693

Amino Acids

76.64

Weight (kDa)

8.74

Isoelectric Point (pI)

44.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUB10_N	PF25368	56 - 162	3e-14	PUB10-like, N-terminal domain
U-box	PF04564	278 - 346	1.4e-16	U-box domain
ARM_ARMC5	PF24768	368 - 527	7.1e-07	ARMC5
Arm	PF00514	411 - 447	7.4e-06	Armadillo/beta-catenin-like repeat
ARM_PUB	PF25598	462 - 658	2.2e-09	Plant U-box protein ARM repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10560 AT1G60190
fragaria_vesca	FvH4_4g34620 FvH4_5g05140
malus_domestica	MD06G1177100.v1.1 MD13G1090900.v1.1 MD14G1183300.v1.1 MD16G1091300.v1.1
prunus_persica	Prupe.1G255000_v2.0.a1 Prupe.5G175800_v2.0.a1
pyrus_communis	pycom06g15720 pycom13g07890 pycom14g15220 pycom16g07800
rosa_chinensis	RchiOBHm_Chr4g0443981 RchiOBHm_Chr7g0193831
rosa_laevigata	RLG00000004242 RLG00000005870
rosa_multiflora	Rmu_co8252843.1_g000001 Rmu_sc0001436.1_g000032 Rmu_sc0027702.1_g000002 Rmu_sc0029481.1_g000002
rosa_roxburghii	Rroxscaffold_3G00261790 Rroxscaffold_5G00384530
rosa_rugosa	Rorug04G0348700 Rorug07G0012400
rosa_samantha	Rh4AG409400 Rh4BG420500 Rh4CG434500 Rh4DG415500 Rh7AG139000 Rh7BG139200 Rh7CG142900 Rh7DG140500
rosa_wichuraiana	Rw4G035170 Rw7G011850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	445, 618
Acc36I	ACCTGC	2 cut(s)	445, 618
AccB1I	GGYRCC	1 cut(s)	988
AccB7I	CCANNNNNTGG	1 cut(s)	1864
AccBSI	CCGCTC	1 cut(s)	355
AccI	GTMKAC	2 cut(s)	567, 765
AccII	CGCG	5 cut(s)	362, 481, 1074, 1554, 1750
AccIII	TCCGGA	1 cut(s)	238
AclWI	GGATC	7 cut(s)	25, 38, 166, 421, 906, 919, 1989
AcoI	YGGCCR	3 cut(s)	393, 1060, 1855
AcsI	RAATTY	4 cut(s)	16, 1200, 1786, 1979
AcuI	CTGAAG	5 cut(s)	608, 992, 1025, 1295, 1749
AcvI	CACGTG	1 cut(s)	433
AcyI	GRCGYC	1 cut(s)	324
AdeI	CACNNNGTG	1 cut(s)	1864
AfaI	GTAC	6 cut(s)	296, 313, 597, 1025, 1481, 1846
AfiI	CCNNNNNNNGG	9 cut(s)	333, 373, 436, 768, 808, 829, 959, 1065, 1864
AgeI	ACCGGT	1 cut(s)	874
AgsI	TTSAA	6 cut(s)	1333, 1350, 1408, 1652, 1800, 2053
AjnI	CCWGG	1 cut(s)	2062
AjuI	GAANNNNNNNTTGG	2 cut(s)	1553, 1585
Alw21I	GWGCWC	2 cut(s)	270, 1960
Alw26I	GTCTC	1 cut(s)	1842
AlwI	GGATC	7 cut(s)	25, 38, 166, 421, 906, 919, 1989
AlwNI	CAGNNNCTG	1 cut(s)	2063
Ama87I	CYCGRG	4 cut(s)	315, 327, 788, 1504
Aor13HI	TCCGGA	1 cut(s)	238
AoxI	GGCC	6 cut(s)	393, 792, 1060, 1509, 1855, 1950
ApoI	RAATTY	4 cut(s)	16, 1200, 1786, 1979
AsiGI	ACCGGT	1 cut(s)	874
AspLEI	GCGC	3 cut(s)	481, 1003, 1151
AspS9I	GGNCC	6 cut(s)	364, 387, 1509, 1950, 2003, 2060
AsuII	TTCGAA	1 cut(s)	1214
AvaI	CYCGRG	4 cut(s)	315, 327, 788, 1504
AvaII	GGWCC	4 cut(s)	364, 387, 2003, 2060
BalI	TGGCCA	2 cut(s)	395, 1857
BamHI	GGATCC	2 cut(s)	30, 911
BanI	GGYRCC	1 cut(s)	988
BanII	GRGCYC	2 cut(s)	270, 1889
BarI	GAAGNNNNNNTAC	2 cut(s)	278, 310
BbrPI	CACGTG	1 cut(s)	433
BbsI	GAAGAC	1 cut(s)	227
Bbv12I	GWGCWC	2 cut(s)	270, 1960
BbvCI	CCTCAGC	1 cut(s)	1113
BccI	CCATC	1 cut(s)	1071
BceAI	ACGGC	1 cut(s)	414
BcgI	CGANNNNNNTGC	2 cut(s)	703, 737
BciT130I	CCWGG	1 cut(s)	2064
BclI	TGATCA	2 cut(s)	601, 1533
BcoDI	GTCTC	1 cut(s)	1842
BfaI	CTAG	3 cut(s)	1697, 1935, 2077
BfmI	CTRYAG	3 cut(s)	1089, 1095, 1290
BfoI	RGCGCY	1 cut(s)	1004
BfuAI	ACCTGC	2 cut(s)	445, 618
BglI	GCCNNNNNGGC	1 cut(s)	1517
BlpI	GCTNAGC	1 cut(s)	710
BmcAI	AGTACT	1 cut(s)	1025
Bme18I	GGWCC	4 cut(s)	364, 387, 2003, 2060
BmeT110I	CYCGRG	4 cut(s)	315, 327, 788, 1504
BmgT120I	GGNCC	6 cut(s)	364, 387, 1509, 1950, 2003, 2060
BmiI	GGNNCC	6 cut(s)	32, 873, 913, 990, 1263, 1638
BmsI	GCATC	3 cut(s)	61, 327, 459
BpiI	GAAGAC	1 cut(s)	227
BplI	GAGNNNNNCTC	2 cut(s)	1876, 1908
BpmI	CTGGAG	2 cut(s)	323, 878
Bpu10I	CCTNAGC	1 cut(s)	1113
Bpu1102I	GCTNAGC	1 cut(s)	710
Bpu14I	TTCGAA	1 cut(s)	1214
BsaAI	YACGTR	1 cut(s)	433
BsaBI	GATNNNNATC	1 cut(s)	1490
BsaHI	GRCGYC	1 cut(s)	324
BsaJI	CCNNGG	9 cut(s)	74, 162, 315, 327, 390, 396, 789, 907, 1505
BsaWI	WCCGGW	4 cut(s)	238, 840, 874, 1482
Bsc4I	CCNNNNNNNGG	9 cut(s)	333, 373, 436, 768, 808, 829, 959, 1065, 1864
Bse118I	RCCGGY	3 cut(s)	741, 874, 1516
Bse1I	ACTGG	4 cut(s)	224, 367, 1953, 2006
Bse8I	GATNNNNATC	1 cut(s)	1490
BseAI	TCCGGA	1 cut(s)	238
BseBI	CCWGG	1 cut(s)	2064
BseDI	CCNNGG	9 cut(s)	74, 162, 315, 327, 390, 396, 789, 907, 1505
BseGI	GGATG	4 cut(s)	52, 342, 1405, 1907
BseJI	GATNNNNATC	1 cut(s)	1490
BseLI	CCNNNNNNNGG	9 cut(s)	333, 373, 436, 768, 808, 829, 959, 1065, 1864
BseMII	CTCAG	5 cut(s)	671, 701, 1104, 1159, 1710
BseNI	ACTGG	4 cut(s)	224, 367, 1953, 2006
BseRI	GAGGAG	5 cut(s)	701, 1130, 1195, 1490, 1961
BseYI	CCCAGC	4 cut(s)	56, 1253, 1445, 1628
Bsh1236I	CGCG	5 cut(s)	362, 481, 1074, 1554, 1750
Bsh1285I	CGRYCG	1 cut(s)	249
BshFI	GGCC	6 cut(s)	395, 794, 1062, 1511, 1857, 1952
BshNI	GGYRCC	1 cut(s)	988
BshTI	ACCGGT	1 cut(s)	874
BsiEI	CGRYCG	1 cut(s)	249
BsiHKAI	GWGCWC	2 cut(s)	270, 1960
BsiHKCI	CYCGRG	4 cut(s)	315, 327, 788, 1504
BslFI	GGGAC	4 cut(s)	230, 332, 1180, 1462
BslI	CCNNNNNNNGG	9 cut(s)	333, 373, 436, 768, 808, 829, 959, 1065, 1864
BsmAI	GTCTC	1 cut(s)	1842
BsmFI	GGGAC	4 cut(s)	230, 332, 1180, 1462
BsmI	GAATGC	3 cut(s)	1318, 1345, 1570
BsnI	GGCC	6 cut(s)	395, 794, 1062, 1511, 1857, 1952
BsoBI	CYCGRG	4 cut(s)	315, 327, 788, 1504
Bsp119I	TTCGAA	1 cut(s)	1214
Bsp1286I	GDGCHC	3 cut(s)	270, 1889, 1960
Bsp13I	TCCGGA	1 cut(s)	238
Bsp1720I	GCTNAGC	1 cut(s)	710
Bsp19I	CCATGG	1 cut(s)	390
Bsp68I	TCGCGA	1 cut(s)	1074
BspANI	GGCC	6 cut(s)	395, 794, 1062, 1511, 1857, 1952
BspCNI	CTCAG	5 cut(s)	672, 702, 1105, 1158, 1711
BspEI	TCCGGA	1 cut(s)	238
BspFNI	CGCG	5 cut(s)	362, 481, 1074, 1554, 1750
BspHI	TCATGA	2 cut(s)	864, 1122
BspLI	GGNNCC	6 cut(s)	32, 873, 913, 990, 1263, 1638
BspMAI	CTGCAG	2 cut(s)	1099, 1294
BspMI	ACCTGC	2 cut(s)	445, 618
BspPI	GGATC	7 cut(s)	25, 38, 166, 421, 906, 919, 1989
BspQI	GCTCTTC	2 cut(s)	968, 1878
BspT104I	TTCGAA	1 cut(s)	1214
BspT107I	GGYRCC	1 cut(s)	988
BsrBI	CCGCTC	1 cut(s)	355
BsrFI	RCCGGY	3 cut(s)	741, 874, 1516
BsrI	ACTGG	4 cut(s)	224, 367, 1953, 2006
BssAI	RCCGGY	3 cut(s)	741, 874, 1516
BssECI	CCNNGG	9 cut(s)	74, 162, 315, 327, 390, 396, 789, 907, 1505
BssNI	GRCGYC	1 cut(s)	324
BssT1I	CCWWGG	2 cut(s)	162, 390
Bst2UI	CCWGG	1 cut(s)	2064
Bst4CI	ACNGT	5 cut(s)	250, 311, 763, 1544, 1673
Bst6I	CTCTTC	6 cut(s)	201, 686, 968, 1001, 1170, 1878
BstACI	GRCGYC	1 cut(s)	324
BstAPI	GCANNNNNTGC	2 cut(s)	1157, 1574
BstBAI	YACGTR	1 cut(s)	433
BstBI	TTCGAA	1 cut(s)	1214
BstC8I	GCNNGC	8 cut(s)	145, 477, 707, 1099, 1432, 1436, 1440, 1942
BstDEI	CTNAG	7 cut(s)	680, 710, 1113, 1145, 1719, 1841, 1919
BstDSI	CCRYGG	2 cut(s)	390, 396
BstF5I	GGATG	4 cut(s)	52, 342, 1405, 1907
BstFNI	CGCG	5 cut(s)	362, 481, 1074, 1554, 1750
BstH2I	RGCGCY	1 cut(s)	1004
BstHHI	GCGC	3 cut(s)	481, 1003, 1151
BstMAI	GTCTC	1 cut(s)	1842
BstMCI	CGRYCG	1 cut(s)	249
BstMWI	GCNNNNNNNGC	9 cut(s)	167, 478, 481, 711, 1157, 1517, 1574, 1706, 1715
BstNI	CCWGG	1 cut(s)	2064
BstNSI	RCATGY	1 cut(s)	1442
BstSFI	CTRYAG	3 cut(s)	1089, 1095, 1290
BstUI	CGCG	5 cut(s)	362, 481, 1074, 1554, 1750
BstV2I	GAAGAC	1 cut(s)	227
BstX2I	RGATCY	3 cut(s)	30, 911, 1994
BstYI	RGATCY	3 cut(s)	30, 911, 1994
BsuRI	GGCC	6 cut(s)	395, 794, 1062, 1511, 1857, 1952
BtgI	CCRYGG	2 cut(s)	390, 396
BtgZI	GCGATG	2 cut(s)	82, 124
BtsCI	GGATG	4 cut(s)	52, 342, 1405, 1907
BtsIMutI	CAGTG	2 cut(s)	1678, 1960
BtuMI	TCGCGA	1 cut(s)	1074
BveI	ACCTGC	2 cut(s)	445, 618
Cac8I	GCNNGC	8 cut(s)	145, 477, 707, 1099, 1432, 1436, 1440, 1942
CaiI	CAGNNNCTG	1 cut(s)	2063
CciI	TCATGA	2 cut(s)	864, 1122
CfoI	GCGC	3 cut(s)	481, 1003, 1151
Cfr10I	RCCGGY	3 cut(s)	741, 874, 1516
Cfr13I	GGNCC	6 cut(s)	364, 387, 1509, 1950, 2003, 2060
Cfr9I	CCCGGG	2 cut(s)	315, 327
CseI	GACGC	2 cut(s)	88, 332
CsiI	ACCWGGT	1 cut(s)	2062
Csp6I	GTAC	6 cut(s)	295, 312, 596, 1024, 1480, 1845
CspAI	ACCGGT	1 cut(s)	874
CspCI	CAANNNNNGTGG	2 cut(s)	385, 420
CviAII	CATG	8 cut(s)	391, 605, 865, 1123, 1439, 1774, 1976, 1985
CviQI	GTAC	6 cut(s)	295, 312, 596, 1024, 1480, 1845
DdeI	CTNAG	7 cut(s)	680, 710, 1113, 1145, 1719, 1841, 1919
DraIII	CACNNNGTG	1 cut(s)	1864
EaeI	YGGCCR	3 cut(s)	393, 1060, 1855
Eam1104I	CTCTTC	6 cut(s)	201, 686, 968, 1001, 1170, 1878
EarI	CTCTTC	6 cut(s)	201, 686, 968, 1001, 1170, 1878
EciI	GGCGGA	1 cut(s)	164
Ecl136II	GAGCTC	1 cut(s)	268
Eco130I	CCWWGG	2 cut(s)	162, 390
Eco24I	GRGCYC	2 cut(s)	270, 1889
Eco32I	GATATC	1 cut(s)	852
Eco47I	GGWCC	4 cut(s)	364, 387, 2003, 2060
Eco53kI	GAGCTC	1 cut(s)	268
Eco57I	CTGAAG	5 cut(s)	608, 992, 1025, 1295, 1749
Eco72I	CACGTG	1 cut(s)	433
Eco88I	CYCGRG	4 cut(s)	315, 327, 788, 1504
EcoICRI	GAGCTC	1 cut(s)	268
EcoO109I	RGGNCCY	1 cut(s)	2060
EcoRI	GAATTC	2 cut(s)	1786, 1979
EcoRII	CCWGG	1 cut(s)	2062
EcoRV	GATATC	1 cut(s)	852
EcoT14I	CCWWGG	2 cut(s)	162, 390
EcoT22I	ATGCAT	1 cut(s)	1570
EcoT38I	GRGCYC	2 cut(s)	270, 1889
ErhI	CCWWGG	2 cut(s)	162, 390
FaeI	CATG	8 cut(s)	394, 608, 868, 1126, 1442, 1777, 1979, 1988
FaqI	GGGAC	4 cut(s)	230, 332, 1180, 1462
FatI	CATG	8 cut(s)	390, 604, 864, 1122, 1438, 1773, 1975, 1984
FauI	CCCGC	6 cut(s)	186, 348, 477, 555, 784, 1156
FbaI	TGATCA	2 cut(s)	601, 1533
FblI	GTMKAC	2 cut(s)	567, 765
FokI	GGATG	4 cut(s)	39, 349, 1412, 1914
FriOI	GRGCYC	2 cut(s)	270, 1889
FspBI	CTAG	3 cut(s)	1697, 1935, 2077
GlaI	GCGC	3 cut(s)	480, 1002, 1150
GsaI	CCCAGC	4 cut(s)	60, 1257, 1449, 1632
GsuI	CTGGAG	2 cut(s)	323, 878
HaeII	RGCGCY	1 cut(s)	1004
HaeIII	GGCC	6 cut(s)	395, 794, 1062, 1511, 1857, 1952
HgaI	GACGC	2 cut(s)	88, 332
HhaI	GCGC	3 cut(s)	481, 1003, 1151
Hin1I	GRCGYC	1 cut(s)	324
Hin1II	CATG	8 cut(s)	394, 608, 868, 1126, 1442, 1777, 1979, 1988
Hin6I	GCGC	3 cut(s)	479, 1001, 1149
HinP1I	GCGC	3 cut(s)	479, 1001, 1149
HincII	GTYRAC	3 cut(s)	502, 568, 1669
HindII	GTYRAC	3 cut(s)	502, 568, 1669
HindIII	AAGCTT	1 cut(s)	287
Hpy166II	GTNNAC	5 cut(s)	502, 568, 766, 1669, 2041
Hpy8I	GTNNAC	5 cut(s)	502, 568, 766, 1669, 2041
Hpy99I	CGWCG	3 cut(s)	30, 326, 892
HpyAV	CCTTC	8 cut(s)	442, 532, 631, 1402, 1608, 1724, 1899, 1919
HpyCH4III	ACNGT	5 cut(s)	250, 311, 763, 1544, 1673
HpyCH4IV	ACGT	2 cut(s)	432, 2043
HpyCH4V	TGCA	9 cut(s)	52, 1097, 1292, 1316, 1322, 1568, 1604, 1742, 1755
HpyF10VI	GCNNNNNNNGC	9 cut(s)	167, 478, 481, 711, 1157, 1517, 1574, 1706, 1715
HpyF3I	CTNAG	7 cut(s)	680, 710, 1113, 1145, 1719, 1841, 1919
HpySE526I	ACGT	2 cut(s)	432, 2043
Hsp92I	GRCGYC	1 cut(s)	324
Hsp92II	CATG	8 cut(s)	394, 608, 868, 1126, 1442, 1777, 1979, 1988
HspAI	GCGC	3 cut(s)	479, 1001, 1149
Kpn2I	TCCGGA	1 cut(s)	238
Ksp22I	TGATCA	2 cut(s)	601, 1533
LguI	GCTCTTC	2 cut(s)	968, 1878
LweI	GCATC	3 cut(s)	61, 327, 459
MabI	ACCWGGT	1 cut(s)	2062
MaeI	CTAG	3 cut(s)	1697, 1935, 2077
MaeII	ACGT	2 cut(s)	432, 2043
MaeIII	GTNAC	2 cut(s)	877, 1684
MbiI	CCGCTC	1 cut(s)	355
MflI	RGATCY	3 cut(s)	30, 911, 1994
MhlI	GDGCHC	3 cut(s)	270, 1889, 1960
MlsI	TGGCCA	2 cut(s)	395, 1857
MluCI	AATT	9 cut(s)	11, 16, 826, 994, 1200, 1701, 1743, 1786, 1979
MluNI	TGGCCA	2 cut(s)	395, 1857
MlyI	GAGTC	2 cut(s)	236, 1078
MmeI	TCCRAC	1 cut(s)	8
Mox20I	TGGCCA	2 cut(s)	395, 1857
Mph1103I	ATGCAT	1 cut(s)	1570
MroI	TCCGGA	1 cut(s)	238
MscI	TGGCCA	2 cut(s)	395, 1857
MseI	TTAA	4 cut(s)	14, 534, 1230, 1881
MslI	CAYNNNNRTG	1 cut(s)	1127
Msp20I	TGGCCA	2 cut(s)	395, 1857
MspA1I	CMGCKG	2 cut(s)	1112, 1628
Mva1269I	GAATGC	3 cut(s)	1318, 1345, 1570
MvaI	CCWGG	1 cut(s)	2064
MvnI	CGCG	5 cut(s)	362, 481, 1074, 1554, 1750
MwoI	GCNNNNNNNGC	9 cut(s)	167, 478, 481, 711, 1157, 1517, 1574, 1706, 1715
NcoI	CCATGG	1 cut(s)	390
NlaIII	CATG	8 cut(s)	394, 608, 868, 1126, 1442, 1777, 1979, 1988
NlaIV	GGNNCC	6 cut(s)	32, 873, 913, 990, 1263, 1638
NmuCI	GTSAC	2 cut(s)	877, 1684
NruI	TCGCGA	1 cut(s)	1074
NsiI	ATGCAT	1 cut(s)	1570
NspI	RCATGY	1 cut(s)	1442
NspV	TTCGAA	1 cut(s)	1214
PaeI	GCATGC	1 cut(s)	1442
PagI	TCATGA	2 cut(s)	864, 1122
PaqCI	CACCTGC	2 cut(s)	445, 618
PciSI	GCTCTTC	2 cut(s)	968, 1878
PctI	GAATGC	3 cut(s)	1318, 1345, 1570
PflMI	CCANNNNNTGG	1 cut(s)	1864
PinAI	ACCGGT	1 cut(s)	874
PleI	GAGTC	2 cut(s)	236, 1077
PmaCI	CACGTG	1 cut(s)	433
PmlI	CACGTG	1 cut(s)	433
PpsI	GAGTC	2 cut(s)	236, 1077
Ppu21I	YACGTR	1 cut(s)	433
PpuMI	RGGWCCY	1 cut(s)	2060
Psp124BI	GAGCTC	1 cut(s)	270
Psp5II	RGGWCCY	1 cut(s)	2060
Psp6I	CCWGG	1 cut(s)	2062
PspCI	CACGTG	1 cut(s)	433
PspFI	CCCAGC	4 cut(s)	56, 1253, 1445, 1628
PspGI	CCWGG	1 cut(s)	2062
PspN4I	GGNNCC	6 cut(s)	32, 873, 913, 990, 1263, 1638
PspPI	GGNCC	6 cut(s)	364, 387, 1509, 1950, 2003, 2060
PspPPI	RGGWCCY	1 cut(s)	2060
PstI	CTGCAG	2 cut(s)	1099, 1294
PstNI	CAGNNNCTG	1 cut(s)	2063
PsuI	RGATCY	3 cut(s)	30, 911, 1994
PvuII	CAGCTG	2 cut(s)	1112, 1628
RruI	TCGCGA	1 cut(s)	1074
RsaI	GTAC	6 cut(s)	296, 313, 597, 1025, 1481, 1846
RsaNI	GTAC	6 cut(s)	295, 312, 596, 1024, 1480, 1845
RseI	CAYNNNNRTG	1 cut(s)	1127
SacI	GAGCTC	1 cut(s)	270
SalI	GTCGAC	1 cut(s)	566
SapI	GCTCTTC	2 cut(s)	968, 1878
SaqAI	TTAA	4 cut(s)	14, 534, 1230, 1881
Sau96I	GGNCC	6 cut(s)	364, 387, 1509, 1950, 2003, 2060
ScaI	AGTACT	1 cut(s)	1025
SchI	GAGTC	2 cut(s)	236, 1078
SduI	GDGCHC	3 cut(s)	270, 1889, 1960
SexAI	ACCWGGT	1 cut(s)	2062
SfaNI	GCATC	3 cut(s)	61, 327, 459
SfcI	CTRYAG	3 cut(s)	1089, 1095, 1290
SfuI	TTCGAA	1 cut(s)	1214
SinI	GGWCC	4 cut(s)	364, 387, 2003, 2060
SmaI	CCCGGG	2 cut(s)	317, 329
SmiMI	CAYNNNNRTG	1 cut(s)	1127
SphI	GCATGC	1 cut(s)	1442
Sse9I	AATT	9 cut(s)	11, 16, 826, 994, 1200, 1701, 1743, 1786, 1979
SspMI	CTAG	3 cut(s)	1697, 1935, 2077
SstI	GAGCTC	1 cut(s)	270
StyI	CCWWGG	2 cut(s)	162, 390
TaaI	ACNGT	5 cut(s)	250, 311, 763, 1544, 1673
TaiI	ACGT	2 cut(s)	435, 2046
TaqII	GACCGA	1 cut(s)	375
TasI	AATT	9 cut(s)	11, 16, 826, 994, 1200, 1701, 1743, 1786, 1979
TatI	WGTACW	3 cut(s)	294, 1023, 1844
TauI	GCSGC	5 cut(s)	475, 484, 804, 1163, 1557
Tru1I	TTAA	4 cut(s)	14, 534, 1230, 1881
Tru9I	TTAA	4 cut(s)	14, 534, 1230, 1881
TscAI	CASTG	2 cut(s)	1678, 1960
TseFI	GTSAC	2 cut(s)	877, 1684
Tsp45I	GTSAC	2 cut(s)	877, 1684
TspDTI	ATGAA	6 cut(s)	359, 935, 1139, 1212, 1992, 2001
TspGWI	ACGGA	2 cut(s)	884, 1703
TspMI	CCCGGG	2 cut(s)	315, 327
TspRI	CASTG	2 cut(s)	1678, 1960
Van91I	CCANNNNNTGG	1 cut(s)	1864
VpaK11BI	GGWCC	4 cut(s)	364, 387, 2003, 2060
XapI	RAATTY	4 cut(s)	16, 1200, 1786, 1979
XbaI	TCTAGA	1 cut(s)	1934
XceI	RCATGY	1 cut(s)	1442
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1442
XmaI	CCCGGG	2 cut(s)	315, 327
XmiI	GTMKAC	2 cut(s)	567, 765
XspI	CTAG	3 cut(s)	1697, 1935, 2077
ZrmI	AGTACT	1 cut(s)	1025
Zsp2I	ATGCAT	1 cut(s)	1570

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.