Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr13

Orthogroup ID

OG0003359

Physical Location & Seq

Genomic Coordinates Forward (+)

6444778 .. 6446481

Gene Structure 1704 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD13G1090900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1704 bp

ATGCTGATGAATTCGAGTCGCGTGGCGAGTCAATTCCGTGTCCTGAGTCGGGCCATGGGTACGGCTCTCGATGTTCTCCCTCTCGGGTTGGTCAGCGCCGCCGTCGAGGTCAAGGAGCACGTGCAATTGGTGGCCAGGCAAGCGCGAAAGGCGGGGTATGAAGTCGACCCGGATGATATTCGGGTCGCGTCGGCGGTATGGTCCGTTTTGTCCGGGTTTGAGAAACGGGTCCTTCCGGGCGTGGGAGATTTGAAACGGGTTCTTGAGTTTCTTCGGATTAGGAAGTGGAGCAAGTGCGAGAAGCAAGTCAAGTTCTTGGATTCGGAAATTGGTCTCGAGAATTTGGGGGAGGAGAAGAGAGAGGTGGCCTTGTTGAGCAGCCTGAAGCGGTTGATGTGCTACTGTCGATGTGTGTTGTTCGATGCTGTCGATGGGGAACGGGGTCGAAGATCCGGCGGCGAGGCGGTGGGTTGCTTCAATTTAGAAGATTTCCGGTGCCCGATTTCGCTGGAAATGGCTGATCCGGTGACGGTATCAACAGGGCAGAGCTACGATCGGTGCTCGATTGCGAAATGGTTCAGAGCTGACAATCTCATTTGTCCCAAGACAGGGGAGAAGCTCAAGAACACGGAAGTGGTGCCGAATTTGGCGCTGAAGAGGTTGATCGAGCAGCACTGTTTCGAAAATGGTGGTGCGTTTGCTGATTCGGGTCGTCGAAATCTCGACATTGGGAGGGCTAGGCTTGCAGTTGCAGGGAGTTTGGCAGATGAGGGAGCCATGCAAATGGTGGCCGAGTTTCTTAATGGAAGGCTTGCGGTTGGGACAGTAGAAGAGCAGAACAAGGCTGCTTATGAAATCCGGCTTCTTACGAAAACAAGCATTTTTAACAGGTCTTGTTTGGTTGAAGCCGGTGTGGTTCCACATTTGTTGAAGCTGTTGTGTTCAGCTGATTCGGTGACTCAAGAGAATGCCATTGCATCCTTGCTGAATGTTTCGAAGTATTCGAAATGCAAGGCCGTGATTGTCGAAAATGGGGGTCTGAATTTGATGGTAGGTGTGTTGAAGAAAGGTCTCAAATCAGAGACTCGTCAGCATGCTGCTGGCACATTGTTTTACCTCGCTTCGACCGAGGAGTACAGGAGATTGATTGGAGAAACTGCAGATGCCATACCGGCTTTGATGGCGCTGATCAAGGATGGGACTGATAGAGCCAGGAAAAACGCATTGGTTGCGATTTTCGGGCTCCTCACACACCCTGCAAATCATAGGAGGGTGATAGCAGCAGGAGCAGTTCCTCTGCTCGTTCATGTCTTAACATTATTTGATAGTGAAGCTCTCGTCATGGATGCTCTGGCAATTCTGTCAACTCTCGCAGAGAAAGCTGATGGATCGATTGCAATTTTGCGTTGCAAAGCATTGGATTCGATTGTGGGGATCCTGAACTCCTCCATTCCAAGGGCGGGGAAGGAGTTCTGTGTATCTCTGTTGCTTGCTCTTTGTGTAAATGGCAGCGGAGATGTGGTTGCTCTTCTGGCGAAGAGCACTTCGCTTATGGGAACTTTGTATTCCCAACTCAGCGAAGGCACATCCCGAGCAAGCAAAAAGGCCAGTTCTCTCATCAGGGTCCTGCATGAGTTCCATGAAAGGTCATCCGGCTCAATCTCTCCGGTTCTTCCACAAGAGCGATTCGTTCACGTTAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009787 GO:0009966 GO:0009987 GO:0010029 GO:0010119 GO:0010646 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0023051 GO:0032446 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048580 GO:0048583 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0061630 GO:0061659 GO:0065007 GO:0070647 GO:0071704 GO:0140096 GO:1900140 GO:1901419 GO:1901564 GO:1905957 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

568

Amino Acids

61.52

Weight (kDa)

8.93

Isoelectric Point (pI)

32.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
U-box	PF04564	162 - 227	1.1e-11	U-box domain
ARM_ARMC5	PF24768	251 - 438	3.6e-10	ARMC5
ARM_PUB	PF25598	278 - 500	4.8e-15	Plant U-box protein ARM repeat region
Arm	PF00514	296 - 332	1.3e-06	Armadillo/beta-catenin-like repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10560 AT1G60190
fragaria_vesca	FvH4_4g34620 FvH4_5g05140
malus_domestica	MD06G1177100.v1.1 MD13G1090900.v1.1 MD14G1183300.v1.1 MD16G1091300.v1.1
prunus_persica	Prupe.1G255000_v2.0.a1 Prupe.5G175800_v2.0.a1
pyrus_communis	pycom06g15720 pycom13g07890 pycom14g15220 pycom16g07800
rosa_chinensis	RchiOBHm_Chr4g0443981 RchiOBHm_Chr7g0193831
rosa_laevigata	RLG00000004242 RLG00000005870
rosa_multiflora	Rmu_co8252843.1_g000001 Rmu_sc0001436.1_g000032 Rmu_sc0027702.1_g000002 Rmu_sc0029481.1_g000002
rosa_roxburghii	Rroxscaffold_3G00261790 Rroxscaffold_5G00384530
rosa_rugosa	Rorug04G0348700 Rorug07G0012400
rosa_samantha	Rh4AG409400 Rh4BG420500 Rh4CG434500 Rh4DG415500 Rh7AG139000 Rh7BG139200 Rh7CG142900 Rh7DG140500
rosa_wichuraiana	Rw4G035170 Rw7G011850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	495, 637
AccI	GTMKAC	1 cut(s)	165
AccII	CGCG	3 cut(s)	21, 145, 188
AciI	CCGC	9 cut(s)	99, 152, 194, 388, 456, 464, 815, 1460, 1512
AclWI	GGATC	5 cut(s)	444, 515, 1396, 1429, 1442
AcoI	YGGCCR	2 cut(s)	132, 789
AcsI	RAATTY	4 cut(s)	10, 340, 643, 1042
AcuI	CTGAAG	2 cut(s)	404, 674
AcvI	CACGTG	1 cut(s)	121
AfaI	GTAC	2 cut(s)	61, 1136
AfiI	CCNNNNNNNGG	6 cut(s)	49, 242, 608, 609, 1455, 1460
AgsI	TTSAA	5 cut(s)	253, 478, 905, 931, 1063
AjnI	CCWGG	2 cut(s)	134, 1211
AjuI	GAANNNNNNNTTGG	2 cut(s)	1208, 1240
AleI	CACNNNNGTG	1 cut(s)	632
AluBI	AGCT	7 cut(s)	549, 584, 619, 934, 947, 1334, 1382
AluI	AGCT	7 cut(s)	549, 584, 619, 934, 947, 1334, 1382
Alw21I	GWGCWC	3 cut(s)	120, 563, 1544
Alw26I	GTCTC	3 cut(s)	338, 1076, 1076
AlwI	GGATC	5 cut(s)	444, 515, 1396, 1429, 1442
Ama87I	CYCGRG	3 cut(s)	83, 335, 1590
AoxI	GGCC	6 cut(s)	51, 132, 366, 789, 1014, 1605
ApeKI	GCWGC	6 cut(s)	378, 670, 845, 1097, 1280, 1509
ApoI	RAATTY	4 cut(s)	10, 340, 643, 1042
Asp700I	GAANNNNTTC	2 cut(s)	575, 1469
AspLEI	GCGC	4 cut(s)	98, 145, 652, 1186
AspS9I	GGNCC	4 cut(s)	51, 201, 229, 1624
AsuC2I	CCSGG	3 cut(s)	170, 214, 237
AsuHPI	GGTGA	3 cut(s)	538, 967, 1285
AsuII	TTCGAA	3 cut(s)	681, 995, 1004
AvaI	CYCGRG	3 cut(s)	83, 335, 1590
AvaII	GGWCC	3 cut(s)	201, 229, 1624
BaeGI	GKGCMC	1 cut(s)	500
BalI	TGGCCA	1 cut(s)	134
BamHI	GGATCC	1 cut(s)	1434
BanI	GGYRCC	2 cut(s)	495, 637
BanII	GRGCYC	1 cut(s)	1245
BbrPI	CACGTG	1 cut(s)	121
Bbv12I	GWGCWC	3 cut(s)	120, 563, 1544
BbvI	GCAGC	6 cut(s)	390, 682, 832, 1084, 1292, 1521
BccI	CCATC	5 cut(s)	425, 1042, 1174, 1190, 1379
BceAI	ACGGC	3 cut(s)	78, 86, 1001
BcgI	CGANNNNNNTGC	2 cut(s)	1404, 1438
BciT130I	CCWGG	2 cut(s)	136, 1213
BclI	TGATCA	1 cut(s)	1188
BcnI	CCSGG	3 cut(s)	170, 214, 237
BcoDI	GTCTC	3 cut(s)	338, 1076, 1076
BfaI	CTAG	1 cut(s)	738
BfmI	CTRYAG	1 cut(s)	1158
BfoI	RGCGCY	3 cut(s)	99, 653, 1187
BglI	GCCNNNNNGGC	1 cut(s)	1172
BisI	GCNGC	8 cut(s)	99, 379, 457, 671, 846, 1098, 1281, 1510
BlsI	GCNGC	8 cut(s)	100, 380, 458, 672, 847, 1099, 1282, 1511
Bme1390I	CCNGG	5 cut(s)	136, 170, 214, 237, 1213
Bme18I	GGWCC	3 cut(s)	201, 229, 1624
BmeT110I	CYCGRG	3 cut(s)	83, 335, 1590
BmgT120I	GGNCC	4 cut(s)	51, 201, 229, 1624
BmiI	GGNNCC	8 cut(s)	230, 497, 639, 775, 918, 1244, 1436, 1625
BmrFI	CCNGG	5 cut(s)	136, 170, 214, 237, 1213
BmsI	GCATC	4 cut(s)	412, 986, 1153, 1336
Bpu14I	TTCGAA	3 cut(s)	681, 995, 1004
BpuEI	CTTGAG	3 cut(s)	284, 605, 945
BpuMI	CCSGG	3 cut(s)	170, 214, 237
Bsa29I	ATCGAT	1 cut(s)	1391
BsaAI	YACGTR	1 cut(s)	121
BsaI	GGTCTC	2 cut(s)	338, 1076
BsaJI	CCNNGG	3 cut(s)	54, 1128, 1454
BsaWI	WCCGGW	3 cut(s)	492, 523, 1666
BsaXI	ACNNNNNCTCC	2 cut(s)	1506, 1536
Bsc4I	CCNNNNNNNGG	6 cut(s)	49, 242, 608, 609, 1455, 1460
Bse118I	RCCGGY	2 cut(s)	908, 1171
Bse1I	ACTGG	1 cut(s)	1608
Bse3DI	GCAATG	1 cut(s)	972
BseBI	CCWGG	2 cut(s)	136, 1213
BseCI	ATCGAT	1 cut(s)	1391
BseDI	CCNNGG	3 cut(s)	54, 1128, 1454
BseGI	GGATG	6 cut(s)	178, 977, 1201, 1351, 1586, 1649
BseLI	CCNNNNNNNGG	6 cut(s)	49, 242, 608, 609, 1455, 1460
BseMI	GCAATG	1 cut(s)	972
BseMII	CTCAG	2 cut(s)	35, 1588
BseNI	ACTGG	1 cut(s)	1608
BseRI	GAGGAG	4 cut(s)	365, 1145, 1235, 1435
BseSI	GKGCMC	1 cut(s)	500
BseXI	GCAGC	6 cut(s)	390, 682, 832, 1084, 1292, 1521
Bsh1236I	CGCG	3 cut(s)	21, 145, 188
Bsh1285I	CGRYCG	2 cut(s)	556, 1128
BshFI	GGCC	6 cut(s)	53, 134, 368, 791, 1016, 1607
BshNI	GGYRCC	2 cut(s)	495, 637
BshVI	ATCGAT	1 cut(s)	1391
BsiEI	CGRYCG	2 cut(s)	556, 1128
BsiHKAI	GWGCWC	3 cut(s)	120, 563, 1544
BsiHKCI	CYCGRG	3 cut(s)	83, 335, 1590
BslFI	GGGAC	3 cut(s)	585, 835, 1213
BslI	CCNNNNNNNGG	6 cut(s)	49, 242, 608, 609, 1455, 1460
BsmAI	GTCTC	3 cut(s)	338, 1076, 1076
BsmFI	GGGAC	3 cut(s)	585, 835, 1213
BsmI	GAATGC	1 cut(s)	973
BsnI	GGCC	6 cut(s)	53, 134, 368, 791, 1016, 1607
Bso31I	GGTCTC	2 cut(s)	338, 1076
BsoBI	CYCGRG	3 cut(s)	83, 335, 1590
Bsp119I	TTCGAA	3 cut(s)	681, 995, 1004
Bsp1286I	GDGCHC	5 cut(s)	120, 500, 563, 1245, 1544
Bsp143I	GATC	7 cut(s)	449, 520, 553, 663, 1188, 1388, 1434
Bsp19I	CCATGG	1 cut(s)	54
BspACI	CCGC	9 cut(s)	99, 152, 194, 388, 456, 464, 815, 1460, 1512
BspANI	GGCC	6 cut(s)	53, 134, 368, 791, 1016, 1607
BspCNI	CTCAG	2 cut(s)	36, 1587
BspDI	ATCGAT	1 cut(s)	1391
BspFNI	CGCG	3 cut(s)	21, 145, 188
BspLI	GGNNCC	8 cut(s)	230, 497, 639, 775, 918, 1244, 1436, 1625
BspMAI	CTGCAG	1 cut(s)	1162
BspPI	GGATC	5 cut(s)	444, 515, 1396, 1429, 1442
BspQI	GCTCTTC	3 cut(s)	825, 1532, 1533
BspT104I	TTCGAA	3 cut(s)	681, 995, 1004
BspT107I	GGYRCC	2 cut(s)	495, 637
BspTNI	GGTCTC	2 cut(s)	338, 1076
BsrDI	GCAATG	1 cut(s)	972
BsrFI	RCCGGY	2 cut(s)	908, 1171
BsrI	ACTGG	1 cut(s)	1608
BssAI	RCCGGY	2 cut(s)	908, 1171
BssECI	CCNNGG	3 cut(s)	54, 1128, 1454
BssMI	GATC	7 cut(s)	449, 520, 553, 663, 1188, 1388, 1434
BssT1I	CCWWGG	2 cut(s)	54, 1454
Bst2UI	CCWGG	2 cut(s)	136, 1213
Bst4CI	ACNGT	4 cut(s)	404, 532, 677, 826
Bst6I	CTCTTC	5 cut(s)	350, 650, 825, 1532, 1533
BstAPI	GCANNNNNTGC	1 cut(s)	1229
BstBAI	YACGTR	1 cut(s)	121
BstBI	TTCGAA	3 cut(s)	681, 995, 1004
BstC8I	GCNNGC	7 cut(s)	141, 744, 813, 1095, 1102, 1491, 1597
BstDEI	CTNAG	2 cut(s)	44, 1574
BstDSI	CCRYGG	1 cut(s)	54
BstF5I	GGATG	6 cut(s)	178, 977, 1201, 1351, 1586, 1649
BstFNI	CGCG	3 cut(s)	21, 145, 188
BstH2I	RGCGCY	3 cut(s)	99, 653, 1187
BstHHI	GCGC	4 cut(s)	98, 145, 652, 1186
BstKTI	GATC	7 cut(s)	452, 523, 556, 666, 1191, 1391, 1437
BstMAI	GTCTC	3 cut(s)	338, 1076, 1076
BstMBI	GATC	7 cut(s)	449, 520, 553, 663, 1188, 1388, 1434
BstMCI	CGRYCG	2 cut(s)	556, 1128
BstMWI	GCNNNNNNNGC	9 cut(s)	140, 149, 743, 1172, 1181, 1229, 1286, 1379, 1532
BstNI	CCWGG	2 cut(s)	136, 1213
BstNSI	RCATGY	1 cut(s)	1097
BstSCI	CCNGG	5 cut(s)	134, 168, 212, 235, 1211
BstSFI	CTRYAG	1 cut(s)	1158
BstSLI	GKGCMC	1 cut(s)	500
BstUI	CGCG	3 cut(s)	21, 145, 188
BstV1I	GCAGC	6 cut(s)	390, 682, 832, 1084, 1292, 1521
BstX2I	RGATCY	2 cut(s)	449, 1434
BstXI	CCANNNNNNTGG	1 cut(s)	784
BstYI	RGATCY	2 cut(s)	449, 1434
Bsu15I	ATCGAT	1 cut(s)	1391
BsuRI	GGCC	6 cut(s)	53, 134, 368, 791, 1016, 1607
BsuTUI	ATCGAT	1 cut(s)	1391
BtgI	CCRYGG	1 cut(s)	54
BtsCI	GGATG	6 cut(s)	178, 977, 1201, 1351, 1586, 1649
BtsIMutI	CAGTG	1 cut(s)	673
Cac8I	GCNNGC	7 cut(s)	141, 744, 813, 1095, 1102, 1491, 1597
CfoI	GCGC	4 cut(s)	98, 145, 652, 1186
Cfr10I	RCCGGY	2 cut(s)	908, 1171
Cfr13I	GGNCC	4 cut(s)	51, 201, 229, 1624
ClaI	ATCGAT	1 cut(s)	1391
CseI	GACGC	1 cut(s)	177
Csp6I	GTAC	2 cut(s)	60, 1135
CspCI	CAANNNNNGTGG	2 cut(s)	909, 944
CviAII	CATG	7 cut(s)	55, 778, 1094, 1307, 1342, 1631, 1640
CviQI	GTAC	2 cut(s)	60, 1135
DdeI	CTNAG	2 cut(s)	44, 1574
DpnI	GATC	7 cut(s)	451, 522, 555, 665, 1190, 1390, 1436
DpnII	GATC	7 cut(s)	449, 520, 553, 663, 1188, 1388, 1434
EaeI	YGGCCR	2 cut(s)	132, 789
Eam1104I	CTCTTC	5 cut(s)	350, 650, 825, 1532, 1533
EarI	CTCTTC	5 cut(s)	350, 650, 825, 1532, 1533
Eco130I	CCWWGG	2 cut(s)	54, 1454
Eco24I	GRGCYC	1 cut(s)	1245
Eco31I	GGTCTC	2 cut(s)	338, 1076
Eco47I	GGWCC	3 cut(s)	201, 229, 1624
Eco57I	CTGAAG	2 cut(s)	404, 674
Eco72I	CACGTG	1 cut(s)	121
Eco88I	CYCGRG	3 cut(s)	83, 335, 1590
EcoO109I	RGGNCCY	2 cut(s)	229, 1624
EcoRI	GAATTC	1 cut(s)	10
EcoRII	CCWGG	2 cut(s)	134, 1211
EcoT14I	CCWWGG	2 cut(s)	54, 1454
EcoT38I	GRGCYC	1 cut(s)	1245
ErhI	CCWWGG	2 cut(s)	54, 1454
FaeI	CATG	7 cut(s)	58, 781, 1097, 1310, 1345, 1634, 1643
FaqI	GGGAC	3 cut(s)	585, 835, 1213
FatI	CATG	7 cut(s)	54, 777, 1093, 1306, 1341, 1630, 1639
FauI	CCCGC	2 cut(s)	145, 1453
FbaI	TGATCA	1 cut(s)	1188
FblI	GTMKAC	1 cut(s)	165
Fnu4HI	GCNGC	8 cut(s)	99, 379, 457, 671, 846, 1098, 1281, 1510
FokI	GGATG	6 cut(s)	185, 964, 1208, 1358, 1573, 1636
FriOI	GRGCYC	1 cut(s)	1245
Fsp4HI	GCNGC	8 cut(s)	99, 379, 457, 671, 846, 1098, 1281, 1510
FspBI	CTAG	1 cut(s)	738
GlaI	GCGC	4 cut(s)	97, 144, 651, 1185
GluI	GCNGC	8 cut(s)	99, 379, 457, 671, 846, 1098, 1281, 1510
HaeII	RGCGCY	3 cut(s)	99, 653, 1187
HaeIII	GGCC	6 cut(s)	53, 134, 368, 791, 1016, 1607
HgaI	GACGC	1 cut(s)	177
HhaI	GCGC	4 cut(s)	98, 145, 652, 1186
Hin1II	CATG	7 cut(s)	58, 781, 1097, 1310, 1345, 1634, 1643
Hin6I	GCGC	4 cut(s)	96, 143, 650, 1184
HinP1I	GCGC	4 cut(s)	96, 143, 650, 1184
HincII	GTYRAC	2 cut(s)	166, 1365
HindII	GTYRAC	2 cut(s)	166, 1365
HphI	GGTGA	3 cut(s)	538, 967, 1285
Hpy166II	GTNNAC	3 cut(s)	166, 1365, 1693
Hpy188I	TCNGA	5 cut(s)	276, 325, 581, 1041, 1081
Hpy8I	GTNNAC	3 cut(s)	166, 1365, 1693
Hpy99I	CGWCG	3 cut(s)	107, 193, 717
HpyAV	CCTTC	4 cut(s)	242, 801, 1459, 1574
HpyCH4III	ACNGT	4 cut(s)	404, 532, 677, 826
HpyCH4IV	ACGT	2 cut(s)	120, 1695
HpyF10VI	GCNNNNNNNGC	9 cut(s)	140, 149, 743, 1172, 1181, 1229, 1286, 1379, 1532
HpyF3I	CTNAG	2 cut(s)	44, 1574
HpySE526I	ACGT	2 cut(s)	120, 1695
Hsp92II	CATG	7 cut(s)	58, 781, 1097, 1310, 1345, 1634, 1643
HspAI	GCGC	4 cut(s)	96, 143, 650, 1184
Ksp22I	TGATCA	1 cut(s)	1188
Kzo9I	GATC	7 cut(s)	449, 520, 553, 663, 1188, 1388, 1434
LguI	GCTCTTC	3 cut(s)	825, 1532, 1533
LmnI	GCTCC	5 cut(s)	115, 288, 773, 1248, 1286
Lsp1109I	GCAGC	6 cut(s)	390, 682, 832, 1084, 1292, 1521
LweI	GCATC	4 cut(s)	412, 986, 1153, 1336
MaeI	CTAG	1 cut(s)	738
MaeII	ACGT	2 cut(s)	120, 1695
MaeIII	GTNAC	2 cut(s)	526, 955
MalI	GATC	7 cut(s)	451, 522, 555, 665, 1190, 1390, 1436
MboI	GATC	7 cut(s)	449, 520, 553, 663, 1188, 1388, 1434
MfeI	CAATTG	1 cut(s)	125
MflI	RGATCY	2 cut(s)	449, 1434
MhlI	GDGCHC	5 cut(s)	120, 500, 563, 1245, 1544
MlsI	TGGCCA	1 cut(s)	134
MluNI	TGGCCA	1 cut(s)	134
MlyI	GAGTC	5 cut(s)	25, 37, 55, 952, 1078
Mox20I	TGGCCA	1 cut(s)	134
MroXI	GAANNNNTTC	2 cut(s)	575, 1469
MscI	TGGCCA	1 cut(s)	134
MseI	TTAA	3 cut(s)	801, 885, 1313
MslI	CAYNNNNRTG	2 cut(s)	632, 782
Msp20I	TGGCCA	1 cut(s)	134
MspA1I	CMGCKG	2 cut(s)	947, 1512
MspR9I	CCNGG	5 cut(s)	136, 170, 214, 237, 1213
MunI	CAATTG	1 cut(s)	125
Mva1269I	GAATGC	1 cut(s)	973
MvaI	CCWGG	2 cut(s)	136, 1213
MvnI	CGCG	3 cut(s)	21, 145, 188
MwoI	GCNNNNNNNGC	9 cut(s)	140, 149, 743, 1172, 1181, 1229, 1286, 1379, 1532
NciI	CCSGG	3 cut(s)	170, 214, 237
NcoI	CCATGG	1 cut(s)	54
NdeII	GATC	7 cut(s)	449, 520, 553, 663, 1188, 1388, 1434
NlaIII	CATG	7 cut(s)	58, 781, 1097, 1310, 1345, 1634, 1643
NlaIV	GGNNCC	8 cut(s)	230, 497, 639, 775, 918, 1244, 1436, 1625
NmeAIII	GCCGAG	1 cut(s)	817
NmuCI	GTSAC	2 cut(s)	526, 955
NspI	RCATGY	1 cut(s)	1097
NspV	TTCGAA	3 cut(s)	681, 995, 1004
OliI	CACNNNNGTG	1 cut(s)	632
PaeI	GCATGC	1 cut(s)	1097
PaeR7I	CTCGAG	1 cut(s)	335
PciSI	GCTCTTC	3 cut(s)	825, 1532, 1533
PcsI	WCGNNNNNNNCGW	3 cut(s)	426, 1001, 1125
PctI	GAATGC	1 cut(s)	973
PdmI	GAANNNNTTC	2 cut(s)	575, 1469
PfeI	GAWTC	5 cut(s)	320, 704, 950, 1421, 1686
PkrI	GCNGC	8 cut(s)	100, 380, 458, 672, 847, 1099, 1282, 1511
Ple19I	CGATCG	1 cut(s)	556
PleI	GAGTC	5 cut(s)	24, 36, 54, 952, 1078
PmaCI	CACGTG	1 cut(s)	121
PmlI	CACGTG	1 cut(s)	121
PpsI	GAGTC	5 cut(s)	24, 36, 54, 952, 1078
Ppu21I	YACGTR	1 cut(s)	121
PpuMI	RGGWCCY	2 cut(s)	229, 1624
Psp5II	RGGWCCY	2 cut(s)	229, 1624
Psp6I	CCWGG	2 cut(s)	134, 1211
PspCI	CACGTG	1 cut(s)	121
PspGI	CCWGG	2 cut(s)	134, 1211
PspN4I	GGNNCC	8 cut(s)	230, 497, 639, 775, 918, 1244, 1436, 1625
PspPI	GGNCC	4 cut(s)	51, 201, 229, 1624
PspPPI	RGGWCCY	2 cut(s)	229, 1624
PstI	CTGCAG	1 cut(s)	1162
PsuI	RGATCY	2 cut(s)	449, 1434
PvuI	CGATCG	1 cut(s)	556
PvuII	CAGCTG	1 cut(s)	947
RsaI	GTAC	2 cut(s)	61, 1136
RsaNI	GTAC	2 cut(s)	60, 1135
RseI	CAYNNNNRTG	2 cut(s)	632, 782
SalI	GTCGAC	1 cut(s)	164
SapI	GCTCTTC	3 cut(s)	825, 1532, 1533
SaqAI	TTAA	3 cut(s)	801, 885, 1313
SatI	GCNGC	8 cut(s)	99, 379, 457, 671, 846, 1098, 1281, 1510
Sau3AI	GATC	7 cut(s)	449, 520, 553, 663, 1188, 1388, 1434
Sau96I	GGNCC	4 cut(s)	51, 201, 229, 1624
SchI	GAGTC	5 cut(s)	25, 37, 55, 952, 1078
ScrFI	CCNGG	5 cut(s)	136, 170, 214, 237, 1213
SduI	GDGCHC	5 cut(s)	120, 500, 563, 1245, 1544
SfaNI	GCATC	4 cut(s)	412, 986, 1153, 1336
SfcI	CTRYAG	1 cut(s)	1158
Sfr274I	CTCGAG	1 cut(s)	335
SfuI	TTCGAA	3 cut(s)	681, 995, 1004
SinI	GGWCC	3 cut(s)	201, 229, 1624
SlaI	CTCGAG	1 cut(s)	335
SmiMI	CAYNNNNRTG	2 cut(s)	632, 782
SmlI	CTYRAG	4 cut(s)	263, 335, 620, 960
SmoI	CTYRAG	4 cut(s)	263, 335, 620, 960
SphI	GCATGC	1 cut(s)	1097
SsiI	CCGC	9 cut(s)	99, 152, 194, 388, 456, 464, 815, 1460, 1512
SspMI	CTAG	1 cut(s)	738
StyD4I	CCNGG	5 cut(s)	134, 168, 212, 235, 1211
StyI	CCWWGG	2 cut(s)	54, 1454
TaaI	ACNGT	4 cut(s)	404, 532, 677, 826
TaiI	ACGT	2 cut(s)	123, 1698
TaqII	GACCGA	1 cut(s)	1142
TatI	WGTACW	1 cut(s)	1134
TauI	GCSGC	2 cut(s)	101, 459
TfiI	GAWTC	5 cut(s)	320, 704, 950, 1421, 1686
Tru1I	TTAA	3 cut(s)	801, 885, 1313
Tru9I	TTAA	3 cut(s)	801, 885, 1313
TscAI	CASTG	1 cut(s)	680
TseFI	GTSAC	2 cut(s)	526, 955
TseI	GCWGC	6 cut(s)	378, 670, 845, 1097, 1280, 1509
Tsp45I	GTSAC	2 cut(s)	526, 955
TspDTI	ATGAA	5 cut(s)	23, 174, 867, 1295, 1656
TspGWI	ACGGA	3 cut(s)	26, 193, 644
TspRI	CASTG	1 cut(s)	680
VpaK11BI	GGWCC	3 cut(s)	201, 229, 1624
XapI	RAATTY	4 cut(s)	10, 340, 643, 1042
XceI	RCATGY	1 cut(s)	1097
XcmI	CCANNNNNNNNNTGG	1 cut(s)	784
XhoI	CTCGAG	1 cut(s)	335
XmiI	GTMKAC	1 cut(s)	165
XmnI	GAANNNNTTC	2 cut(s)	575, 1469
XspI	CTAG	1 cut(s)	738

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.