Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0003359

Physical Location & Seq

Genomic Coordinates Forward (+)

3002370 .. 3004749

Gene Structure 2380 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g05140.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2064 bp

ATGAGTAAACATTTCGACAATACTGACCGTCGGATTCTCAAGTTTCCGGCGGTAAACCCTTGCCAGAGTGTCCCTCCAGCGACCCTTCTTGCCTCTCTGATAATTCTCTCCGGAAAAATACTCGATTTCCAATCAAAAAGCTTCGCAACACAAAAGCGAAACTGCAGAGAAACAATCCGGCAGGTTAGTCTTCTTCACATTTTCTTTGAGGAGCTTTGCGCCGGCGAGAGGGTTCTCTCCGACTCGGTGGCTGTCAGCTTCTCCGAGCTCCACCTCACCTTGCAGAAAATCCGGTTTTTATTGGAGGATTGCAGTAGGGATGGCGCTAGGCTTTGGATGCTCACGAAATGTGAGTTTCTGGCTACTCAATTTTGGATTCTGATACGAGCAGTCTCTACCGCTCTTGATGTTCTTCCTTTGAGCTTGATCGAGGTGGAGGATGAAGTGAAGGAGGTGGTTGAATTAGTAAGGAGGCAATCAAGGAAGGCGAGATTTGAGCTAGACCGAAGTGATGGAAATGCTAAGAAAATGTTGCTTTCGATATTGGATCAGTTCGAGAAGAGAGTTGAGCCTGATTCGGGTGATGTGAAGAGGGTTCTTGATTACGTTGGAATCAGAAGCTGGAGTGAGTGCAACAATGAGATTAAGTTCTTGGAGGAAGAGATTGCTTTCGAGTGTTCGGATTGCGTAGGAAGAGAGGTTCCATTTCTGAGCAGCTTGGTTGGATTTTTGAGCTACAGCAGGGGAGTGATTTTCGAAACGTTGGATACTCGAAACCTCGATGAAACTCAAGGCGATTTCAGGTCCAACATGCAGGTGTTCAATTGCTTAAACACCGAGGATTTTAGGTGTCCAATTTCGCTGGAAGTAATGCTTGATCCAGTGATTATATCTACAGGGCAGACTTATGATCGTGCTTCGATTCAAAAATGGCTCAAAGGTGGAAACTTACTCTGTCCCAAAACAGGGGAGAAGCTCACGAACACCGACTTGGTGCCCAATTTGGTTCTCCGAAAGCTGATCAGAAACTTCTGTGCATACAACGGCGTTTCCCTTGGAAGGATGGGAAAGCAAAGCAGTGACATAACGCGAACAACTGTGCCGGATAGTCAGGTTGCTTCGGAATCGATGAAGTTTCTCTCAATGTTTCTCACTACTAGGCTTGCATTTGGTACTAGTGAGCAGAGGAACAAGGCTGCATATGAGACTCGCCTGCTTGCGAAATCGAACATCTTCAACAGGTCTTGTTTGATCAATGCGGGAGCAGTGCCACCTCTATTGAACCTGTTGTGTTCTACTGGTTCATGTACTCAAGAGAACGCAATGGCGGCCTTGTTGAAGCTCTCGAAATATGGAACTGGCAAGAGATTGATAGTTGAATGCAGGGGACTGACTCCAATTCTTGATGTGCTTAAACATGGACTGACTTGGGAAGCTAGGCAAAGTGCCGCAGCAGCAATTTTCTACCTCTCATCGGTGAAAGAGTACCGGAAATTAATCGGAGAAGCACCGGACGCTATCCAGGGTCTTGTGGATTTGATGAAGGAAGGAACACCTTGTGGGAAGAAGAATGCTGTGGTTGCGATTTTCGGGCTTCTTCTCTTGCCCAAAAACCACCATAGAGTTCTTGAAGCAGGCACAGTACCATTGCTCATTGACATACTAGCCTCATCAGAAAAAGTTGAGCTTCTAAGTGACACATTAGCAGTTATCTCCTTGTTAGCTGAGAGTACAGAAGGAGCATTCGCAATTCTAAGCTCGAAATCCTTGCATCTGATCACCGGCATTCTTCAATCTTCGACATCCCAAACTGCGAAAGAGTATTGCGTTTCGACATTGCTGGCTTTATGCATCAATGGTGGTGCGGAAGTTGTAGCTCTTTTAGCCAAAAACCAAACGTTGATGGCTTCTCTGTTTTCGCTTTTGACAGAAGGAACCGCCAACGCAGGAAAGAAATCGCGTGCCCTCATCAAAATTCTGCACAGCTTCCATGAAACCAGATCCTCCGGATGGATCATAAGCTCTGCCGTCCCATGTCATGAACTTGCCATTCATGAACGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0008150 GO:0010029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048580 GO:0050789 GO:0050793 GO:0051239 GO:0065007 GO:1900140 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

688

Amino Acids

76.05

Weight (kDa)

8.15

Isoelectric Point (pI)

42.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUB10_N	PF25368	52 - 163	4.5e-11	PUB10-like, N-terminal domain
U-box	PF04564	280 - 346	1.2e-16	U-box domain
ARM_PUB	PF25598	466 - 661	3.1e-11	Plant U-box protein ARM repeat region
ARM_ARMC5	PF24768	536 - 659	2e-06	ARMC5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10560 AT1G60190
fragaria_vesca	FvH4_4g34620 FvH4_5g05140
malus_domestica	MD06G1177100.v1.1 MD13G1090900.v1.1 MD14G1183300.v1.1 MD16G1091300.v1.1
prunus_persica	Prupe.1G255000_v2.0.a1 Prupe.5G175800_v2.0.a1
pyrus_communis	pycom06g15720 pycom13g07890 pycom14g15220 pycom16g07800
rosa_chinensis	RchiOBHm_Chr4g0443981 RchiOBHm_Chr7g0193831
rosa_laevigata	RLG00000004242 RLG00000005870
rosa_multiflora	Rmu_co8252843.1_g000001 Rmu_sc0001436.1_g000032 Rmu_sc0027702.1_g000002 Rmu_sc0029481.1_g000002
rosa_roxburghii	Rroxscaffold_3G00261790 Rroxscaffold_5G00384530
rosa_rugosa	Rorug04G0348700 Rorug07G0012400
rosa_samantha	Rh4AG409400 Rh4BG420500 Rh4CG434500 Rh4DG415500 Rh7AG139000 Rh7BG139200 Rh7CG142900 Rh7DG140500
rosa_wichuraiana	Rw4G035170 Rw7G011850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	805
Acc36I	ACCTGC	2 cut(s)	172, 805
AccB1I	GGYRCC	1 cut(s)	994
AccBSI	CCGCTC	1 cut(s)	401
AccII	CGCG	2 cut(s)	1090, 1960
AccIII	TCCGGA	2 cut(s)	110, 2006
AciI	CCGC	7 cut(s)	50, 399, 1259, 1328, 1449, 1865, 1938
AclI	AACGTT	2 cut(s)	761, 1898
AclWI	GGATC	4 cut(s)	555, 872, 1995, 2021
AcsI	RAATTY	1 cut(s)	1974
AdeI	CACNNNGTG	1 cut(s)	1559
AfaI	GTAC	5 cut(s)	1174, 1309, 1487, 1644, 1732
AfiI	CCNNNNNNNGG	7 cut(s)	228, 578, 965, 966, 1059, 1474, 2010
AgsI	TTSAA	9 cut(s)	461, 823, 926, 1237, 1282, 1339, 1379, 1631, 1793
AhlI	ACTAGT	1 cut(s)	1175
AjnI	CCWGG	1 cut(s)	1521
AjuI	GAANNNNNNNTTGG	2 cut(s)	974, 1006
AloI	GAACNNNNNNTCC	2 cut(s)	684, 716
Alw21I	GWGCWC	1 cut(s)	270
Alw26I	GTCTC	2 cut(s)	397, 1199
AlwI	GGATC	4 cut(s)	555, 872, 1995, 2021
AlwNI	CAGNNNCTG	1 cut(s)	621
Aor13HI	TCCGGA	2 cut(s)	110, 2006
AoxI	GGCC	1 cut(s)	1329
ApeKI	GCWGC	4 cut(s)	714, 1196, 1451, 1454
ApoI	RAATTY	1 cut(s)	1974
AseI	ATTAAT	1 cut(s)	1496
Asp700I	GAANNNNTTC	1 cut(s)	1232
AspLEI	GCGC	2 cut(s)	221, 326
AspS9I	GGNCC	1 cut(s)	804
AsuHPI	GGTGA	4 cut(s)	268, 593, 1489, 1771
AsuII	TTCGAA	1 cut(s)	756
AvaII	GGWCC	1 cut(s)	804
BaeGI	GKGCMC	2 cut(s)	999, 1966
BanI	GGYRCC	1 cut(s)	994
BanII	GRGCYC	1 cut(s)	270
BbsI	GAAGAC	1 cut(s)	182
Bbv12I	GWGCWC	1 cut(s)	270
BbvI	GCAGC	4 cut(s)	726, 1183, 1463, 1466
BccI	CCATC	5 cut(s)	314, 506, 1057, 1897, 2004
BceAI	ACGGC	2 cut(s)	1060, 2012
BcgI	CGANNNNNNTGC	2 cut(s)	1750, 1784
BciT130I	CCWGG	1 cut(s)	1523
BciVI	GTATCC	1 cut(s)	760
BclI	TGATCA	3 cut(s)	1020, 1251, 1776
BcoDI	GTCTC	2 cut(s)	397, 1199
BcuI	ACTAGT	1 cut(s)	1175
BfaI	CTAG	6 cut(s)	327, 500, 1158, 1176, 1437, 1664
BfmI	CTRYAG	3 cut(s)	163, 736, 894
BfoI	RGCGCY	1 cut(s)	327
BfuAI	ACCTGC	2 cut(s)	172, 805
BfuI	GTATCC	1 cut(s)	760
BisI	GCNGC	6 cut(s)	715, 1197, 1329, 1449, 1452, 1455
BlsI	GCNGC	6 cut(s)	716, 1198, 1330, 1450, 1453, 1456
Bme1390I	CCNGG	1 cut(s)	1523
Bme18I	GGWCC	1 cut(s)	804
BmgT120I	GGNCC	1 cut(s)	804
BmiI	GGNNCC	3 cut(s)	702, 996, 1936
BmrFI	CCNGG	1 cut(s)	1523
BmsI	GCATC	3 cut(s)	327, 1780, 1860
BpiI	GAAGAC	1 cut(s)	182
BplI	GAGNNNNNCTC	2 cut(s)	58, 90
BpmI	CTGGAG	2 cut(s)	60, 643
Bpu14I	TTCGAA	1 cut(s)	756
BpuEI	CTTGAG	3 cut(s)	23, 774, 1296
Bsa29I	ATCGAT	1 cut(s)	1127
BsaJI	CCNNGG	3 cut(s)	837, 1054, 1522
BsaWI	WCCGGW	5 cut(s)	110, 291, 1488, 1510, 2006
Bsc4I	CCNNNNNNNGG	7 cut(s)	228, 578, 965, 966, 1059, 1474, 2010
Bse118I	RCCGGY	2 cut(s)	221, 1781
Bse1I	ACTGG	3 cut(s)	881, 1303, 1363
Bse3DI	GCAATG	3 cut(s)	1329, 1646, 1835
BseAI	TCCGGA	2 cut(s)	110, 2006
BseBI	CCWGG	1 cut(s)	1523
BseCI	ATCGAT	1 cut(s)	1127
BseDI	CCNNGG	3 cut(s)	837, 1054, 1522
BseGI	GGATG	6 cut(s)	325, 342, 445, 1068, 1802, 2015
BseLI	CCNNNNNNNGG	7 cut(s)	228, 578, 965, 966, 1059, 1474, 2010
BseMI	GCAATG	3 cut(s)	1329, 1646, 1835
BseMII	CTCAG	2 cut(s)	701, 1716
BseNI	ACTGG	3 cut(s)	881, 1303, 1363
BseRI	GAGGAG	1 cut(s)	224
BseSI	GKGCMC	2 cut(s)	999, 1966
BseXI	GCAGC	4 cut(s)	726, 1183, 1463, 1466
BsgI	GTGCAG	1 cut(s)	1964
Bsh1236I	CGCG	2 cut(s)	1090, 1960
BshFI	GGCC	1 cut(s)	1331
BshNI	GGYRCC	1 cut(s)	994
BshVI	ATCGAT	1 cut(s)	1127
BsiHKAI	GWGCWC	1 cut(s)	270
BslFI	GGGAC	4 cut(s)	56, 942, 1401, 2015
BslI	CCNNNNNNNGG	7 cut(s)	228, 578, 965, 966, 1059, 1474, 2010
BsmAI	GTCTC	2 cut(s)	397, 1199
BsmFI	GGGAC	4 cut(s)	56, 942, 1401, 2015
BsmI	GAATGC	4 cut(s)	1385, 1576, 1742, 1785
BsnI	GGCC	1 cut(s)	1331
Bsp119I	TTCGAA	1 cut(s)	756
Bsp1286I	GDGCHC	3 cut(s)	270, 999, 1966
Bsp13I	TCCGGA	2 cut(s)	110, 2006
Bsp143I	GATC	9 cut(s)	426, 547, 877, 910, 1020, 1251, 1776, 2000, 2013
BspACI	CCGC	7 cut(s)	50, 399, 1259, 1328, 1449, 1865, 1938
BspANI	GGCC	1 cut(s)	1331
BspCNI	CTCAG	2 cut(s)	702, 1717
BspDI	ATCGAT	1 cut(s)	1127
BspEI	TCCGGA	2 cut(s)	110, 2006
BspFNI	CGCG	2 cut(s)	1090, 1960
BspHI	TCATGA	2 cut(s)	2038, 2053
BspLI	GGNNCC	3 cut(s)	702, 996, 1936
BspMAI	CTGCAG	1 cut(s)	167
BspMI	ACCTGC	2 cut(s)	172, 805
BspPI	GGATC	4 cut(s)	555, 872, 1995, 2021
BspT104I	TTCGAA	1 cut(s)	756
BspT107I	GGYRCC	1 cut(s)	994
BsrBI	CCGCTC	1 cut(s)	401
BsrDI	GCAATG	3 cut(s)	1329, 1646, 1835
BsrFI	RCCGGY	2 cut(s)	221, 1781
BsrI	ACTGG	3 cut(s)	881, 1303, 1363
BssAI	RCCGGY	2 cut(s)	221, 1781
BssECI	CCNNGG	3 cut(s)	837, 1054, 1522
BssMI	GATC	9 cut(s)	426, 547, 877, 910, 1020, 1251, 1776, 2000, 2013
BssT1I	CCWWGG	1 cut(s)	1054
Bst2UI	CCWGG	1 cut(s)	1523
Bst4CI	ACNGT	4 cut(s)	29, 1099, 1642, 2061
Bst6I	CTCTTC	4 cut(s)	554, 584, 654, 688
BstBI	TTCGAA	1 cut(s)	756
BstC8I	GCNNGC	7 cut(s)	223, 1164, 1214, 1218, 1636, 1842, 1962
BstDEI	CTNAG	5 cut(s)	522, 710, 1691, 1725, 1754
BstF5I	GGATG	6 cut(s)	325, 342, 445, 1068, 1802, 2015
BstFNI	CGCG	2 cut(s)	1090, 1960
BstH2I	RGCGCY	1 cut(s)	327
BstHHI	GCGC	2 cut(s)	221, 326
BstKTI	GATC	9 cut(s)	429, 550, 880, 913, 1023, 1254, 1779, 2003, 2016
BstMAI	GTCTC	2 cut(s)	397, 1199
BstMBI	GATC	9 cut(s)	426, 547, 877, 910, 1020, 1251, 1776, 2000, 2013
BstMWI	GCNNNNNNNGC	6 cut(s)	337, 1328, 1454, 1514, 1580, 1883
BstNI	CCWGG	1 cut(s)	1523
BstNSI	RCATGY	1 cut(s)	814
BstSCI	CCNGG	1 cut(s)	1521
BstSFI	CTRYAG	3 cut(s)	163, 736, 894
BstSLI	GKGCMC	2 cut(s)	999, 1966
BstUI	CGCG	2 cut(s)	1090, 1960
BstV1I	GCAGC	4 cut(s)	726, 1183, 1463, 1466
BstV2I	GAAGAC	1 cut(s)	182
BstX2I	RGATCY	1 cut(s)	2000
BstYI	RGATCY	1 cut(s)	2000
Bsu15I	ATCGAT	1 cut(s)	1127
BsuI	GTATCC	1 cut(s)	760
BsuRI	GGCC	1 cut(s)	1331
BsuTUI	ATCGAT	1 cut(s)	1127
BtsCI	GGATG	6 cut(s)	325, 342, 445, 1068, 1802, 2015
BtsI	GCAGTG	2 cut(s)	1084, 1272
BtsIMutI	CAGTG	3 cut(s)	888, 1084, 1272
BveI	ACCTGC	2 cut(s)	172, 805
Cac8I	GCNNGC	7 cut(s)	223, 1164, 1214, 1218, 1636, 1842, 1962
CaiI	CAGNNNCTG	1 cut(s)	621
CciI	TCATGA	2 cut(s)	2038, 2053
CfoI	GCGC	2 cut(s)	221, 326
Cfr10I	RCCGGY	2 cut(s)	221, 1781
Cfr13I	GGNCC	1 cut(s)	804
ClaI	ATCGAT	1 cut(s)	1127
CseI	GACGC	1 cut(s)	1523
Csp6I	GTAC	5 cut(s)	1173, 1308, 1486, 1643, 1731
CspCI	CAANNNNNGTGG	2 cut(s)	1260, 1295
CviAII	CATG	7 cut(s)	811, 1305, 1418, 1991, 2034, 2039, 2054
CviQI	GTAC	5 cut(s)	1173, 1308, 1486, 1643, 1731
DdeI	CTNAG	5 cut(s)	522, 710, 1691, 1725, 1754
DpnI	GATC	9 cut(s)	428, 549, 879, 912, 1022, 1253, 1778, 2002, 2015
DpnII	GATC	9 cut(s)	426, 547, 877, 910, 1020, 1251, 1776, 2000, 2013
DraIII	CACNNNGTG	1 cut(s)	1559
Eam1104I	CTCTTC	4 cut(s)	554, 584, 654, 688
EarI	CTCTTC	4 cut(s)	554, 584, 654, 688
Ecl136II	GAGCTC	1 cut(s)	268
Eco130I	CCWWGG	1 cut(s)	1054
Eco24I	GRGCYC	1 cut(s)	270
Eco47I	GGWCC	1 cut(s)	804
Eco53kI	GAGCTC	1 cut(s)	268
EcoICRI	GAGCTC	1 cut(s)	268
EcoRII	CCWGG	1 cut(s)	1521
EcoT14I	CCWWGG	1 cut(s)	1054
EcoT22I	ATGCAT	1 cut(s)	1853
EcoT38I	GRGCYC	1 cut(s)	270
ErhI	CCWWGG	1 cut(s)	1054
FaeI	CATG	7 cut(s)	814, 1308, 1421, 1994, 2037, 2042, 2057
FalI	AAGNNNNNCTT	4 cut(s)	858, 890, 1671, 1703
FaqI	GGGAC	4 cut(s)	56, 942, 1401, 2015
FatI	CATG	7 cut(s)	810, 1304, 1417, 1990, 2033, 2038, 2053
FauI	CCCGC	1 cut(s)	1252
FauNDI	CATATG	1 cut(s)	1201
FbaI	TGATCA	3 cut(s)	1020, 1251, 1776
Fnu4HI	GCNGC	6 cut(s)	715, 1197, 1329, 1449, 1452, 1455
FokI	GGATG	6 cut(s)	332, 349, 452, 1075, 1789, 2022
FriOI	GRGCYC	1 cut(s)	270
Fsp4HI	GCNGC	6 cut(s)	715, 1197, 1329, 1449, 1452, 1455
FspBI	CTAG	6 cut(s)	327, 500, 1158, 1176, 1437, 1664
GlaI	GCGC	2 cut(s)	220, 325
GluI	GCNGC	6 cut(s)	715, 1197, 1329, 1449, 1452, 1455
GsuI	CTGGAG	2 cut(s)	60, 643
HaeII	RGCGCY	1 cut(s)	327
HaeIII	GGCC	1 cut(s)	1331
HgaI	GACGC	1 cut(s)	1523
HhaI	GCGC	2 cut(s)	221, 326
Hin1II	CATG	7 cut(s)	814, 1308, 1421, 1994, 2037, 2042, 2057
Hin6I	GCGC	2 cut(s)	219, 324
HinP1I	GCGC	2 cut(s)	219, 324
HindIII	AAGCTT	1 cut(s)	139
HinfI	GANTC	9 cut(s)	34, 242, 376, 575, 612, 922, 1124, 1207, 1393
HphI	GGTGA	4 cut(s)	268, 593, 1489, 1771
Hpy166II	GTNNAC	2 cut(s)	8, 55
Hpy8I	GTNNAC	2 cut(s)	8, 55
Hpy99I	CGWCG	1 cut(s)	33
HpyAV	CCTTC	8 cut(s)	95, 442, 478, 1053, 1537, 1541, 1730, 1925
HpyCH4III	ACNGT	4 cut(s)	29, 1099, 1642, 2061
HpyCH4IV	ACGT	3 cut(s)	606, 761, 1898
HpyF10VI	GCNNNNNNNGC	6 cut(s)	337, 1328, 1454, 1514, 1580, 1883
HpyF3I	CTNAG	5 cut(s)	522, 710, 1691, 1725, 1754
HpySE526I	ACGT	3 cut(s)	606, 761, 1898
Hsp92II	CATG	7 cut(s)	814, 1308, 1421, 1994, 2037, 2042, 2057
HspAI	GCGC	2 cut(s)	219, 324
Kpn2I	TCCGGA	2 cut(s)	110, 2006
KroI	GCCGGC	1 cut(s)	221
KroNI	GCCGGC	1 cut(s)	223
Ksp22I	TGATCA	3 cut(s)	1020, 1251, 1776
Kzo9I	GATC	9 cut(s)	426, 547, 877, 910, 1020, 1251, 1776, 2000, 2013
LmnI	GCTCC	4 cut(s)	211, 273, 1262, 1739
Lsp1109I	GCAGC	4 cut(s)	726, 1183, 1463, 1466
LweI	GCATC	3 cut(s)	327, 1780, 1860
MaeI	CTAG	6 cut(s)	327, 500, 1158, 1176, 1437, 1664
MaeII	ACGT	3 cut(s)	606, 761, 1898
MaeIII	GTNAC	2 cut(s)	1079, 1694
MalI	GATC	9 cut(s)	428, 549, 879, 912, 1022, 1253, 1778, 2002, 2015
MbiI	CCGCTC	1 cut(s)	401
MboI	GATC	9 cut(s)	426, 547, 877, 910, 1020, 1251, 1776, 2000, 2013
MfeI	CAATTG	1 cut(s)	823
MflI	RGATCY	1 cut(s)	2000
MhlI	GDGCHC	3 cut(s)	270, 999, 1966
MlyI	GAGTC	3 cut(s)	236, 1201, 1387
MmeI	TCCRAC	6 cut(s)	11, 264, 589, 703, 744, 831
Mph1103I	ATGCAT	1 cut(s)	1853
MreI	CGCCGGCG	1 cut(s)	221
MroI	TCCGGA	2 cut(s)	110, 2006
MroNI	GCCGGC	1 cut(s)	221
MroXI	GAANNNNTTC	1 cut(s)	1232
MseI	TTAA	4 cut(s)	645, 830, 1413, 1496
MslI	CAYNNNNRTG	1 cut(s)	815
MspR9I	CCNGG	1 cut(s)	1523
MunI	CAATTG	1 cut(s)	823
Mva1269I	GAATGC	4 cut(s)	1385, 1576, 1742, 1785
MvaI	CCWGG	1 cut(s)	1523
MvnI	CGCG	2 cut(s)	1090, 1960
MwoI	GCNNNNNNNGC	6 cut(s)	337, 1328, 1454, 1514, 1580, 1883
NaeI	GCCGGC	1 cut(s)	223
NdeI	CATATG	1 cut(s)	1201
NdeII	GATC	9 cut(s)	426, 547, 877, 910, 1020, 1251, 1776, 2000, 2013
NgoMIV	GCCGGC	1 cut(s)	221
NlaIII	CATG	7 cut(s)	814, 1308, 1421, 1994, 2037, 2042, 2057
NlaIV	GGNNCC	3 cut(s)	702, 996, 1936
NmuCI	GTSAC	2 cut(s)	1079, 1694
NsiI	ATGCAT	1 cut(s)	1853
NspI	RCATGY	1 cut(s)	814
NspV	TTCGAA	1 cut(s)	756
PagI	TCATGA	2 cut(s)	2038, 2053
PaqCI	CACCTGC	1 cut(s)	805
PctI	GAATGC	4 cut(s)	1385, 1576, 1742, 1785
PdiI	GCCGGC	1 cut(s)	223
PdmI	GAANNNNTTC	1 cut(s)	1232
PfeI	GAWTC	6 cut(s)	34, 376, 575, 612, 922, 1124
PkrI	GCNGC	6 cut(s)	716, 1198, 1330, 1450, 1453, 1456
PleI	GAGTC	3 cut(s)	236, 1201, 1387
PpsI	GAGTC	3 cut(s)	236, 1201, 1387
PshBI	ATTAAT	1 cut(s)	1496
Psp124BI	GAGCTC	1 cut(s)	270
Psp1406I	AACGTT	2 cut(s)	761, 1898
Psp6I	CCWGG	1 cut(s)	1521
PspGI	CCWGG	1 cut(s)	1521
PspN4I	GGNNCC	3 cut(s)	702, 996, 1936
PspPI	GGNCC	1 cut(s)	804
PstI	CTGCAG	1 cut(s)	167
PstNI	CAGNNNCTG	1 cut(s)	621
PsuI	RGATCY	1 cut(s)	2000
RsaI	GTAC	5 cut(s)	1174, 1309, 1487, 1644, 1732
RsaNI	GTAC	5 cut(s)	1173, 1308, 1486, 1643, 1731
RseI	CAYNNNNRTG	1 cut(s)	815
SacI	GAGCTC	1 cut(s)	270
SaqAI	TTAA	4 cut(s)	645, 830, 1413, 1496
SatI	GCNGC	6 cut(s)	715, 1197, 1329, 1449, 1452, 1455
Sau3AI	GATC	9 cut(s)	426, 547, 877, 910, 1020, 1251, 1776, 2000, 2013
Sau96I	GGNCC	1 cut(s)	804
SchI	GAGTC	3 cut(s)	236, 1201, 1387
ScrFI	CCNGG	1 cut(s)	1523
SduI	GDGCHC	3 cut(s)	270, 999, 1966
SfaNI	GCATC	3 cut(s)	327, 1780, 1860
SfcI	CTRYAG	3 cut(s)	163, 736, 894
SfuI	TTCGAA	1 cut(s)	756
SgrAI	CRCCGGYG	1 cut(s)	221
SinI	GGWCC	1 cut(s)	804
SmiMI	CAYNNNNRTG	1 cut(s)	815
SmlI	CTYRAG	3 cut(s)	38, 789, 1311
SmoI	CTYRAG	3 cut(s)	38, 789, 1311
SpeI	ACTAGT	1 cut(s)	1175
SsiI	CCGC	7 cut(s)	50, 399, 1259, 1328, 1449, 1865, 1938
SspMI	CTAG	6 cut(s)	327, 500, 1158, 1176, 1437, 1664
SstI	GAGCTC	1 cut(s)	270
StyD4I	CCNGG	1 cut(s)	1521
StyI	CCWWGG	1 cut(s)	1054
TaaI	ACNGT	4 cut(s)	29, 1099, 1642, 2061
TaiI	ACGT	3 cut(s)	609, 764, 1901
TaqII	GACCGA	1 cut(s)	519
TatI	WGTACW	2 cut(s)	1307, 1730
TauI	GCSGC	2 cut(s)	1331, 1451
TfiI	GAWTC	6 cut(s)	34, 376, 575, 612, 922, 1124
Tru1I	TTAA	4 cut(s)	645, 830, 1413, 1496
Tru9I	TTAA	4 cut(s)	645, 830, 1413, 1496
TscAI	CASTG	3 cut(s)	888, 1084, 1272
TseFI	GTSAC	2 cut(s)	1079, 1694
TseI	GCWGC	4 cut(s)	714, 1196, 1451, 1454
Tsp45I	GTSAC	2 cut(s)	1079, 1694
TspDTI	ATGAA	8 cut(s)	456, 798, 1145, 1293, 1556, 2007, 2042, 2055
TspRI	CASTG	3 cut(s)	888, 1084, 1272
VpaK11BI	GGWCC	1 cut(s)	804
VspI	ATTAAT	1 cut(s)	1496
XapI	RAATTY	1 cut(s)	1974
XceI	RCATGY	1 cut(s)	814
XmnI	GAANNNNTTC	1 cut(s)	1232
XspI	CTAG	6 cut(s)	327, 500, 1158, 1176, 1437, 1664
Zsp2I	ATGCAT	1 cut(s)	1853

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.