Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0003359

Physical Location & Seq

Genomic Coordinates Reverse (-)

20230266 .. 20232329

Gene Structure 2064 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g15720.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2064 bp

ATGAACCCGAAATTCGATAGCAGCGACCGCCGGATTCTCACGTTTCCGGCGGTGCGACCTTGCGAATCTATTTCTCTGGAGACCCTTCTCGAGTCTCTGATCGCTCTCTCCCACACCATCTGCAGTTTCCAATCGGAATGCTGTGTGACGCAATGGAGGAACAGCCGGGAAGCAATTCGGCAAGTTCGTGTTCTTCTCATGTTCTTTGAGGAGGTACGTGAATGCAATTCGGTTCTTCCGAAATCGTCTCTTGTCGTCTGCTTCTCCGAGCTTCATTTCGTCTTCCAAAAAATTCGATTTTTATTGGAGGATTGCACGAGGGAAGGTGGTCGAGTTTTGATGCTGACGAAATGCGAGTTTCTTGCGACTCAATTTCGGTTTCTGATTCGAGCTGTGGCGACGGCTCTCGATGTTTTACCGTTGAAAGCGATCGATGTTGGCGACGAAGTTAAGGAATTGGTTGAATTGGTGTCGAAGCAATCGTGGAAGGCCAACATGGAGCTTCAAGCGGGTGACAGATTGGCTTCGAAACGATTGCTTGCGATTCTGAACCAATTCGAAAAGGGAATCGAGCCCGATTTGAATGCCGTAAAGCGGGTCCTCGATTACCTTCGAATTAAAAGCTGGAGCGCGTGCAACATGGAGATCAAATTCTTGGAAGAACAAATTGCTATCAAGCGTTTCGACCGGGAGGACATGGATGTTCCTTTTCTAAGTAGTTTGGTGGGGTTCATGAGCTACAGCAGGGGAGTGATTTTCGAAGCATTGGATCATCAAAACCCCGCGAATCAAATTGATTCCAGGTGCGACGCGGAGATGTTTCGTTGCTTAAACCCTGAAGATTTCAGGTGCCCGATTTCCCTTGAGCTAATGCTTGATCGGTTGACTGTATCTACAGGTCAGACGTACGATCGAAATTCGATTCAAAAATGGCTCGACGACGGACACATGCTCTGCCCCAAAACAGGAGAGATGATCACGAACACAGAGTTGGTACCGAATTCGATTCTCCGAAGGCTGATAAAAAACCTTTGTGAATGCAACGGCATTTCTCTCGGCAGGCCAGGAAGCAAAAGCGCTGACAAGGAAAAAACGATCGCACCTGGTAGCCCGGTTGCTAAACACGCAATGAGGTTTCTCTCGAGATTTCTCAGCGGAAGGCTTGCTTGCGGAACAAGCGAACAGAAGAACAAGGCTGCTTATGAGATTCGATTGCTAGGCAAATCAAACATTTTCAATAGGTCTTGTTTGATCCAGGCAGGCTGTATCCCTCCCCTGCTGAGGCTATTGAATTCCGCTGATGCATCCACGCAAGGGAATGCAATTGCAGCCTTGTTGAAGCTCGCGAAATACGCAAGCGGAATGAAATTGATAATGTCATGGGGAGGCCTACCATCAGTTGTTGCCGTTCTTAAAAATGGGTTGAGTTTAGAAGCCAGACAAAGCGCAGCTGCAACGATGTTTTACCTCTCTTCGATGAGGGAGTCTCGGAAACTAATCGGAGAAATGCCTGAGGCCATCCCAGCTCTTGTGGATCTGATCAGGGAAGGAACAACGTGTGGGAAAAAGAACTCCGTGGTTGCGATTTTCGGGCTGATCCTCCTTCCTAGGAATCAACAGAAAGTGCTGGACGCAGGCATTGTTCCATTGCTAGTTGACATAATATCTTCTTCGTCACAAAACCCTGATCAGCTCGTTGATGATGCGTTATCAATTCTTGCAATTTTGGCTGAAAATGTCGTAGGATCACACGAAATCCTCCACGCCATTGATTTGCAATTGATCATCCGCGTTCTTCAAACTTCGACATCCCCAAAAGCAAAAGAGTATTGTGTTTCAACATTGCTGTCTTTGTGCATCAATGGCGGGGAGGAAGTTGTTGCTGTTTTGGCAACGGAATCATCACTAATGCCTGGACTCTTTTCGCTCTTGACGGATGGAACATCTTATGCGATCAAGAAATCGCGCTCCCTCATCAAAATTATCCATGACTTTCGTGAAGCTAGTACATCAAGATGGATGAGTTCTGCAGTTCGGCGCAAACATTGCGTCCAGGAACGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0008150 GO:0010029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048580 GO:0050789 GO:0050793 GO:0051239 GO:0065007 GO:1900140 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

688

Amino Acids

76.45

Weight (kDa)

8.53

Isoelectric Point (pI)

46.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUB10_N	PF25368	59 - 160	1.3e-11	PUB10-like, N-terminal domain
U-box	PF04564	279 - 343	6.5e-13	U-box domain
ARM_PUB	PF25598	395 - 664	3.3e-15	Plant U-box protein ARM repeat region
Arm	PF00514	413 - 449	6.6e-08	Armadillo/beta-catenin-like repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10560 AT1G60190
fragaria_vesca	FvH4_4g34620 FvH4_5g05140
malus_domestica	MD06G1177100.v1.1 MD13G1090900.v1.1 MD14G1183300.v1.1 MD16G1091300.v1.1
prunus_persica	Prupe.1G255000_v2.0.a1 Prupe.5G175800_v2.0.a1
pyrus_communis	pycom06g15720 pycom13g07890 pycom14g15220 pycom16g07800
rosa_chinensis	RchiOBHm_Chr4g0443981 RchiOBHm_Chr7g0193831
rosa_laevigata	RLG00000004242 RLG00000005870
rosa_multiflora	Rmu_co8252843.1_g000001 Rmu_sc0001436.1_g000032 Rmu_sc0027702.1_g000002 Rmu_sc0029481.1_g000002
rosa_roxburghii	Rroxscaffold_3G00261790 Rroxscaffold_5G00384530
rosa_rugosa	Rorug04G0348700 Rorug07G0012400
rosa_samantha	Rh4AG409400 Rh4BG420500 Rh4CG434500 Rh4DG415500 Rh7AG139000 Rh7BG139200 Rh7CG142900 Rh7DG140500
rosa_wichuraiana	Rw4G035170 Rw7G011850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	994
AccB1I	GGYRCC	2 cut(s)	849, 994
AccII	CGCG	6 cut(s)	632, 785, 812, 1346, 1791, 1966
AclWI	GGATC	5 cut(s)	777, 1246, 1542, 1591, 1753
AcsI	RAATTY	6 cut(s)	11, 291, 650, 916, 1000, 1291
AcuI	CTGAAG	1 cut(s)	858
AfaI	GTAC	4 cut(s)	216, 908, 996, 2008
AfeI	AGCGCT	1 cut(s)	1078
AfiI	CCNNNNNNNGG	4 cut(s)	594, 965, 1281, 1314
AflIII	ACRYGT	1 cut(s)	1556
AjnI	CCWGG	6 cut(s)	800, 1063, 1102, 1254, 1912, 2052
AjuI	GAANNNNNNNTTGG	2 cut(s)	974, 1006
Alw26I	GTCTC	4 cut(s)	74, 99, 252, 1491
AlwI	GGATC	5 cut(s)	777, 1246, 1542, 1591, 1753
Ama87I	CYCGRG	2 cut(s)	89, 1141
Aor51HI	AGCGCT	1 cut(s)	1078
AoxI	GGCC	4 cut(s)	489, 1061, 1387, 1515
ApeKI	GCWGC	5 cut(s)	21, 1196, 1328, 1448, 1451
ApoI	RAATTY	6 cut(s)	11, 291, 650, 916, 1000, 1291
ArsI	GACNNNNNNTTYG	1 cut(s)	2034
Asp700I	GAANNNNTTC	2 cut(s)	174, 554
Asp718I	GGTACC	1 cut(s)	994
AspA2I	CCTAGG	1 cut(s)	1607
AspLEI	GCGC	5 cut(s)	632, 1079, 1448, 1968, 2040
AspS9I	GGNCC	1 cut(s)	598
AsuC2I	CCSGG	3 cut(s)	167, 689, 1112
AsuHPI	GGTGA	1 cut(s)	524
AsuII	TTCGAA	4 cut(s)	527, 558, 613, 759
AvaI	CYCGRG	2 cut(s)	89, 1141
AvaII	GGWCC	1 cut(s)	598
AvrII	CCTAGG	1 cut(s)	1607
AxyI	CCTNAGG	1 cut(s)	1512
BaeGI	GKGCMC	1 cut(s)	854
BanI	GGYRCC	2 cut(s)	849, 994
BanII	GRGCYC	1 cut(s)	576
BauI	CACGAG	1 cut(s)	316
BbsI	GAAGAC	1 cut(s)	274
BbvCI	CCTCAGC	1 cut(s)	1280
BbvI	GCAGC	5 cut(s)	33, 1183, 1340, 1438, 1460
BccI	CCATC	5 cut(s)	125, 1402, 1526, 1931, 2010
BceAI	ACGGC	4 cut(s)	417, 572, 1060, 1391
BcgI	CGANNNNNNTGC	8 cut(s)	344, 378, 517, 551, 566, 600, 1036, 1070
BciT130I	CCWGG	6 cut(s)	802, 1065, 1104, 1256, 1914, 2054
BciVI	GTATCC	1 cut(s)	1277
BclI	TGATCA	4 cut(s)	975, 1539, 1687, 1782
BcnI	CCSGG	3 cut(s)	167, 689, 1112
BcoDI	GTCTC	4 cut(s)	74, 99, 252, 1491
BfaI	CTAG	4 cut(s)	1217, 1608, 1652, 2004
BfmI	CTRYAG	4 cut(s)	121, 739, 894, 2028
BfoI	RGCGCY	1 cut(s)	1080
BfuI	GTATCC	1 cut(s)	1277
BisI	GCNGC	5 cut(s)	22, 1197, 1329, 1449, 1452
BlnI	CCTAGG	1 cut(s)	1607
BlsI	GCNGC	5 cut(s)	23, 1198, 1330, 1450, 1453
Bme1390I	CCNGG	9 cut(s)	167, 689, 802, 1065, 1104, 1112, 1256, 1914, 2054
Bme18I	GGWCC	1 cut(s)	598
BmeT110I	CYCGRG	2 cut(s)	89, 1141
BmgT120I	GGNCC	1 cut(s)	598
BmiI	GGNNCC	3 cut(s)	599, 851, 996
BmrFI	CCNGG	9 cut(s)	167, 689, 802, 1065, 1104, 1112, 1256, 1914, 2054
BmsI	GCATC	5 cut(s)	330, 1291, 1313, 1693, 1866
BpiI	GAAGAC	1 cut(s)	274
BplI	GAGNNNNNCTC	2 cut(s)	1471, 1503
BpmI	CTGGAG	2 cut(s)	98, 646
Bpu10I	CCTNAGC	1 cut(s)	1280
Bpu14I	TTCGAA	4 cut(s)	527, 558, 613, 759
BpuEI	CTTGAG	1 cut(s)	884
BpuMI	CCSGG	3 cut(s)	167, 689, 1112
Bsa29I	ATCGAT	1 cut(s)	432
BsaAI	YACGTR	1 cut(s)	218
BsaI	GGTCTC	1 cut(s)	74
BsaJI	CCNNGG	2 cut(s)	1575, 1607
Bsc4I	CCNNNNNNNGG	4 cut(s)	594, 965, 1281, 1314
Bse21I	CCTNAGG	1 cut(s)	1512
Bse3DI	GCAATG	5 cut(s)	158, 1134, 1646, 1841, 2044
BseBI	CCWGG	6 cut(s)	802, 1065, 1104, 1256, 1914, 2054
BseCI	ATCGAT	1 cut(s)	432
BseDI	CCNNGG	2 cut(s)	1575, 1607
BseGI	GGATG	7 cut(s)	706, 1304, 1518, 1785, 1808, 1942, 2025
BseLI	CCNNNNNNNGG	4 cut(s)	594, 965, 1281, 1314
BseMI	GCAATG	5 cut(s)	158, 1134, 1646, 1841, 2044
BseMII	CTCAG	3 cut(s)	1165, 1271, 1503
BseRI	GAGGAG	1 cut(s)	224
BseSI	GKGCMC	1 cut(s)	854
BseXI	GCAGC	5 cut(s)	33, 1183, 1340, 1438, 1460
BseYI	CCCAGC	1 cut(s)	1522
Bsh1236I	CGCG	6 cut(s)	632, 785, 812, 1346, 1791, 1966
Bsh1285I	CGRYCG	5 cut(s)	28, 432, 688, 913, 1098
BshFI	GGCC	4 cut(s)	491, 1063, 1389, 1517
BshNI	GGYRCC	2 cut(s)	849, 994
BshVI	ATCGAT	1 cut(s)	432
BsiEI	CGRYCG	5 cut(s)	28, 432, 688, 913, 1098
BsiHKCI	CYCGRG	2 cut(s)	89, 1141
BsiSI	CCGG	5 cut(s)	31, 47, 166, 688, 1112
BsiWI	CGTACG	1 cut(s)	906
BslI	CCNNNNNNNGG	4 cut(s)	594, 965, 1281, 1314
BsmAI	GTCTC	4 cut(s)	74, 99, 252, 1491
BsmBI	CGTCTC	1 cut(s)	252
BsmI	GAATGC	5 cut(s)	143, 227, 589, 1043, 1324
BsnI	GGCC	4 cut(s)	491, 1063, 1389, 1517
Bso31I	GGTCTC	1 cut(s)	74
BsoBI	CYCGRG	2 cut(s)	89, 1141
Bsp119I	TTCGAA	4 cut(s)	527, 558, 613, 759
Bsp1286I	GDGCHC	2 cut(s)	576, 854
Bsp68I	TCGCGA	1 cut(s)	1346
BspANI	GGCC	4 cut(s)	491, 1063, 1389, 1517
BspCNI	CTCAG	3 cut(s)	1164, 1272, 1504
BspDI	ATCGAT	1 cut(s)	432
BspFNI	CGCG	6 cut(s)	632, 785, 812, 1346, 1791, 1966
BspHI	TCATGA	1 cut(s)	732
BspLI	GGNNCC	3 cut(s)	599, 851, 996
BspMAI	CTGCAG	2 cut(s)	125, 2032
BspPI	GGATC	5 cut(s)	777, 1246, 1542, 1591, 1753
BspT104I	TTCGAA	4 cut(s)	527, 558, 613, 759
BspT107I	GGYRCC	2 cut(s)	849, 994
BspTNI	GGTCTC	1 cut(s)	74
BsrDI	GCAATG	5 cut(s)	158, 1134, 1646, 1841, 2044
BssECI	CCNNGG	2 cut(s)	1575, 1607
BssSI	CACGAG	1 cut(s)	316
BssT1I	CCWWGG	1 cut(s)	1607
Bst2BI	CACGAG	1 cut(s)	316
Bst2UI	CCWGG	6 cut(s)	802, 1065, 1104, 1256, 1914, 2054
Bst4CI	ACNGT	3 cut(s)	420, 889, 2061
Bst6I	CTCTTC	1 cut(s)	1477
BstAPI	GCANNNNNTGC	1 cut(s)	2046
BstBAI	YACGTR	1 cut(s)	218
BstBI	TTCGAA	4 cut(s)	527, 558, 613, 759
BstC8I	GCNNGC	9 cut(s)	540, 634, 1061, 1164, 1168, 1261, 1344, 1357, 1636
BstDEI	CTNAG	4 cut(s)	713, 1151, 1280, 1512
BstDSI	CCRYGG	1 cut(s)	1575
BstF5I	GGATG	7 cut(s)	706, 1304, 1518, 1785, 1808, 1942, 2025
BstFNI	CGCG	6 cut(s)	632, 785, 812, 1346, 1791, 1966
BstH2I	RGCGCY	1 cut(s)	1080
BstHHI	GCGC	5 cut(s)	632, 1079, 1448, 1968, 2040
BstMAI	GTCTC	4 cut(s)	74, 99, 252, 1491
BstMCI	CGRYCG	5 cut(s)	28, 432, 688, 913, 1098
BstNI	CCWGG	6 cut(s)	802, 1065, 1104, 1256, 1914, 2054
BstNSI	RCATGY	1 cut(s)	952
BstSCI	CCNGG	9 cut(s)	165, 687, 800, 1063, 1102, 1110, 1254, 1912, 2052
BstSFI	CTRYAG	4 cut(s)	121, 739, 894, 2028
BstSLI	GKGCMC	1 cut(s)	854
BstUI	CGCG	6 cut(s)	632, 785, 812, 1346, 1791, 1966
BstV1I	GCAGC	5 cut(s)	33, 1183, 1340, 1438, 1460
BstV2I	GAAGAC	1 cut(s)	274
BstX2I	RGATCY	1 cut(s)	1534
BstYI	RGATCY	1 cut(s)	1534
Bsu15I	ATCGAT	1 cut(s)	432
Bsu36I	CCTNAGG	1 cut(s)	1512
BsuI	GTATCC	1 cut(s)	1277
BsuRI	GGCC	4 cut(s)	491, 1063, 1389, 1517
BsuTUI	ATCGAT	1 cut(s)	432
BtgI	CCRYGG	1 cut(s)	1575
BtsCI	GGATG	7 cut(s)	706, 1304, 1518, 1785, 1808, 1942, 2025
BtuMI	TCGCGA	1 cut(s)	1346
Cac8I	GCNNGC	9 cut(s)	540, 634, 1061, 1164, 1168, 1261, 1344, 1357, 1636
CciI	TCATGA	1 cut(s)	732
CfoI	GCGC	5 cut(s)	632, 1079, 1448, 1968, 2040
Cfr13I	GGNCC	1 cut(s)	598
ClaI	ATCGAT	1 cut(s)	432
CseI	GACGC	4 cut(s)	157, 818, 1640, 2038
CsiI	ACCWGGT	1 cut(s)	1102
Csp6I	GTAC	4 cut(s)	215, 907, 995, 2007
CviAII	CATG	8 cut(s)	199, 496, 640, 697, 733, 949, 1380, 1988
CviQI	GTAC	4 cut(s)	215, 907, 995, 2007
DdeI	CTNAG	4 cut(s)	713, 1151, 1280, 1512
Eam1104I	CTCTTC	1 cut(s)	1477
EarI	CTCTTC	1 cut(s)	1477
Eco130I	CCWWGG	1 cut(s)	1607
Eco147I	AGGCCT	1 cut(s)	1389
Eco24I	GRGCYC	1 cut(s)	576
Eco31I	GGTCTC	1 cut(s)	74
Eco47I	GGWCC	1 cut(s)	598
Eco47III	AGCGCT	1 cut(s)	1078
Eco57I	CTGAAG	1 cut(s)	858
Eco81I	CCTNAGG	1 cut(s)	1512
Eco88I	CYCGRG	2 cut(s)	89, 1141
EcoO109I	RGGNCCY	1 cut(s)	598
EcoRI	GAATTC	2 cut(s)	1000, 1291
EcoRII	CCWGG	6 cut(s)	800, 1063, 1102, 1254, 1912, 2052
EcoT14I	CCWWGG	1 cut(s)	1607
EcoT22I	ATGCAT	1 cut(s)	1306
EcoT38I	GRGCYC	1 cut(s)	576
ErhI	CCWWGG	1 cut(s)	1607
Esp3I	CGTCTC	1 cut(s)	252
FaeI	CATG	8 cut(s)	202, 499, 643, 700, 736, 952, 1383, 1991
FalI	AAGNNNNNCTT	2 cut(s)	1150, 1182
FatI	CATG	8 cut(s)	198, 495, 639, 696, 732, 948, 1379, 1987
FauI	CCCGC	4 cut(s)	502, 588, 790, 1859
FbaI	TGATCA	4 cut(s)	975, 1539, 1687, 1782
Fnu4HI	GCNGC	5 cut(s)	22, 1197, 1329, 1449, 1452
FokI	GGATG	7 cut(s)	713, 1291, 1505, 1772, 1795, 1949, 2032
FriOI	GRGCYC	1 cut(s)	576
Fsp4HI	GCNGC	5 cut(s)	22, 1197, 1329, 1449, 1452
FspBI	CTAG	4 cut(s)	1217, 1608, 1652, 2004
GlaI	GCGC	5 cut(s)	631, 1078, 1447, 1967, 2039
GluI	GCNGC	5 cut(s)	22, 1197, 1329, 1449, 1452
GsaI	CCCAGC	1 cut(s)	1526
GsuI	CTGGAG	2 cut(s)	98, 646
HaeII	RGCGCY	1 cut(s)	1080
HaeIII	GGCC	4 cut(s)	491, 1063, 1389, 1517
HapII	CCGG	5 cut(s)	31, 47, 166, 688, 1112
HgaI	GACGC	4 cut(s)	157, 818, 1640, 2038
HhaI	GCGC	5 cut(s)	632, 1079, 1448, 1968, 2040
Hin1II	CATG	8 cut(s)	202, 499, 643, 700, 736, 952, 1383, 1991
Hin6I	GCGC	5 cut(s)	630, 1077, 1446, 1966, 2038
HinP1I	GCGC	5 cut(s)	630, 1077, 1446, 1966, 2038
HincII	GTYRAC	2 cut(s)	885, 1657
HindII	GTYRAC	2 cut(s)	885, 1657
HpaII	CCGG	5 cut(s)	31, 47, 166, 688, 1112
HphI	GGTGA	1 cut(s)	524
Hpy166II	GTNNAC	2 cut(s)	885, 1657
Hpy8I	GTNNAC	2 cut(s)	885, 1657
Hpy99I	CGWCG	5 cut(s)	403, 446, 812, 941, 944
HpyAV	CCTTC	8 cut(s)	95, 317, 481, 620, 1008, 1152, 1541, 1613
HpyCH4III	ACNGT	3 cut(s)	420, 889, 2061
HpyCH4IV	ACGT	4 cut(s)	41, 217, 905, 1556
HpyF3I	CTNAG	4 cut(s)	713, 1151, 1280, 1512
HpySE526I	ACGT	4 cut(s)	41, 217, 905, 1556
Hsp92II	CATG	8 cut(s)	202, 499, 643, 700, 736, 952, 1383, 1991
HspAI	GCGC	5 cut(s)	630, 1077, 1446, 1966, 2038
KpnI	GGTACC	1 cut(s)	998
Ksp22I	TGATCA	4 cut(s)	975, 1539, 1687, 1782
LmnI	GCTCC	3 cut(s)	499, 627, 1973
Lsp1109I	GCAGC	5 cut(s)	33, 1183, 1340, 1438, 1460
LweI	GCATC	5 cut(s)	330, 1291, 1313, 1693, 1866
MabI	ACCWGGT	1 cut(s)	1102
MaeI	CTAG	4 cut(s)	1217, 1608, 1652, 2004
MaeII	ACGT	4 cut(s)	41, 217, 905, 1556
MaeIII	GTNAC	3 cut(s)	145, 512, 1674
MfeI	CAATTG	2 cut(s)	1323, 1778
MflI	RGATCY	1 cut(s)	1534
MhlI	GDGCHC	2 cut(s)	576, 854
MlyI	GAGTC	4 cut(s)	101, 361, 1493, 1911
Mph1103I	ATGCAT	1 cut(s)	1306
MroXI	GAANNNNTTC	2 cut(s)	174, 554
MseI	TTAA	4 cut(s)	450, 618, 830, 1413
MslI	CAYNNNNRTG	1 cut(s)	2014
MspA1I	CMGCKG	3 cut(s)	1155, 1298, 1451
MspI	CCGG	5 cut(s)	31, 47, 166, 688, 1112
MspR9I	CCNGG	9 cut(s)	167, 689, 802, 1065, 1104, 1112, 1256, 1914, 2054
MunI	CAATTG	2 cut(s)	1323, 1778
Mva1269I	GAATGC	5 cut(s)	143, 227, 589, 1043, 1324
MvaI	CCWGG	6 cut(s)	802, 1065, 1104, 1256, 1914, 2054
MvnI	CGCG	6 cut(s)	632, 785, 812, 1346, 1791, 1966
NciI	CCSGG	3 cut(s)	167, 689, 1112
NlaIII	CATG	8 cut(s)	202, 499, 643, 700, 736, 952, 1383, 1991
NlaIV	GGNNCC	3 cut(s)	599, 851, 996
NmeAIII	GCCGAG	1 cut(s)	1035
NmuCI	GTSAC	3 cut(s)	145, 512, 1674
NruI	TCGCGA	1 cut(s)	1346
NsiI	ATGCAT	1 cut(s)	1306
NspI	RCATGY	1 cut(s)	952
NspV	TTCGAA	4 cut(s)	527, 558, 613, 759
PaeR7I	CTCGAG	2 cut(s)	89, 1141
PagI	TCATGA	1 cut(s)	732
PceI	AGGCCT	1 cut(s)	1389
PcsI	WCGNNNNNNNCGW	5 cut(s)	21, 184, 236, 438, 479
PctI	GAATGC	5 cut(s)	143, 227, 589, 1043, 1324
PdmI	GAANNNNTTC	2 cut(s)	174, 554
Pfl23II	CGTACG	1 cut(s)	906
PfoI	TCCNGGA	1 cut(s)	2052
PkrI	GCNGC	5 cut(s)	23, 1198, 1330, 1450, 1453
Ple19I	CGATCG	3 cut(s)	432, 913, 1098
PleI	GAGTC	4 cut(s)	100, 361, 1492, 1911
PpsI	GAGTC	4 cut(s)	100, 361, 1492, 1911
Ppu21I	YACGTR	1 cut(s)	218
PpuMI	RGGWCCY	1 cut(s)	598
Psp5II	RGGWCCY	1 cut(s)	598
Psp6I	CCWGG	6 cut(s)	800, 1063, 1102, 1254, 1912, 2052
PspFI	CCCAGC	1 cut(s)	1522
PspGI	CCWGG	6 cut(s)	800, 1063, 1102, 1254, 1912, 2052
PspLI	CGTACG	1 cut(s)	906
PspN4I	GGNNCC	3 cut(s)	599, 851, 996
PspPI	GGNCC	1 cut(s)	598
PspPPI	RGGWCCY	1 cut(s)	598
PstI	CTGCAG	2 cut(s)	125, 2032
PsuI	RGATCY	1 cut(s)	1534
PvuI	CGATCG	3 cut(s)	432, 913, 1098
PvuII	CAGCTG	1 cut(s)	1451
RruI	TCGCGA	1 cut(s)	1346
RsaI	GTAC	4 cut(s)	216, 908, 996, 2008
RsaNI	GTAC	4 cut(s)	215, 907, 995, 2007
RseI	CAYNNNNRTG	1 cut(s)	2014
SaqAI	TTAA	4 cut(s)	450, 618, 830, 1413
SatI	GCNGC	5 cut(s)	22, 1197, 1329, 1449, 1452
Sau96I	GGNCC	1 cut(s)	598
SchI	GAGTC	4 cut(s)	101, 361, 1493, 1911
ScrFI	CCNGG	9 cut(s)	167, 689, 802, 1065, 1104, 1112, 1256, 1914, 2054
SduI	GDGCHC	2 cut(s)	576, 854
SexAI	ACCWGGT	1 cut(s)	1102
SfaNI	GCATC	5 cut(s)	330, 1291, 1313, 1693, 1866
SfcI	CTRYAG	4 cut(s)	121, 739, 894, 2028
Sfr274I	CTCGAG	2 cut(s)	89, 1141
SfuI	TTCGAA	4 cut(s)	527, 558, 613, 759
SinI	GGWCC	1 cut(s)	598
SlaI	CTCGAG	2 cut(s)	89, 1141
SmiMI	CAYNNNNRTG	1 cut(s)	2014
SmlI	CTYRAG	3 cut(s)	89, 863, 1141
SmoI	CTYRAG	3 cut(s)	89, 863, 1141
SseBI	AGGCCT	1 cut(s)	1389
SspMI	CTAG	4 cut(s)	1217, 1608, 1652, 2004
StuI	AGGCCT	1 cut(s)	1389
StyD4I	CCNGG	9 cut(s)	165, 687, 800, 1063, 1102, 1110, 1254, 1912, 2052
StyI	CCWWGG	1 cut(s)	1607
TaaI	ACNGT	3 cut(s)	420, 889, 2061
TaiI	ACGT	4 cut(s)	44, 220, 908, 1559
TatI	WGTACW	1 cut(s)	2006
Tru1I	TTAA	4 cut(s)	450, 618, 830, 1413
Tru9I	TTAA	4 cut(s)	450, 618, 830, 1413
TseFI	GTSAC	3 cut(s)	145, 512, 1674
TseI	GCWGC	5 cut(s)	21, 1196, 1328, 1448, 1451
Tsp45I	GTSAC	3 cut(s)	145, 512, 1674
TspDTI	ATGAA	4 cut(s)	17, 263, 721, 1379
TspGWI	ACGGA	4 cut(s)	957, 1564, 1910, 1949
VpaK11BI	GGWCC	1 cut(s)	598
XapI	RAATTY	6 cut(s)	11, 291, 650, 916, 1000, 1291
XceI	RCATGY	1 cut(s)	952
XhoI	CTCGAG	2 cut(s)	89, 1141
XmaJI	CCTAGG	1 cut(s)	1607
XmnI	GAANNNNTTC	2 cut(s)	174, 554
XspI	CTAG	4 cut(s)	1217, 1608, 1652, 2004
Zsp2I	ATGCAT	1 cut(s)	1306

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.