Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0003359

Physical Location & Seq

Genomic Coordinates Reverse (-)

17905405 .. 17907982

Gene Structure 2578 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom14g15220.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2199 bp

ATGTTTGGTTACAATGATATCAAGGTTTTGAAAGAAAACGGAATTGACGTGTGTTTTAAAATTACTGGACCACGTATTGCTACTCTTGCTGCTCCTCCTATTAAGTCCGTAAACAAACACAGAGCAAAAACAGAGAACCATTTCTCTTCTGATTCGAATTCTACACCAATTCTATGTACAAAAACAGAGCAAAAACAGAGCCACTCTGTTTCTCCACACACAATTGTATCAATGAATTCGAAATTTGATAGCGACGACCGCCGGATACTCATGTTTCCGGCGGTGCGCCCTTGCGAATGTATTTCTCAGGAGACCCTTCTCGAGTCTCTGATCCCTCTCTCCCACACAATCTGCAATTTCCACTCGGAATGCTTCGCGACGCAACGGAAGAATAGCCGGGAAGCAATTCGCCTAGTTCGTGTTCTTCTCATGTTCTTTGAGGAGGTACGTGAATGCAATTCGGTTCTTTCGAAATCTTCCGCTGTCCTCTGCTTCTCCGAGCTTCATTTCGTCTTCCAAAAATTCCGGTTTTTGTTGGAAGACTGCACGAGAGAAGGCGGTCGGATTTTGATGCTGACGAAATGCGAGTTTCTTGCTACCCAATTTAGGCTGCTGATTCGAGCTTTGGCGACGGCTCTTGATGTTTTGCCGTTGAAATTGATCGATGTTGGCGATGAAGTTAAGGAATTGGTTGAATTGGTGTCGAAGCAATCGTGGAAGGCCAAAATCGAGCTCGAAGCGGATGACAAATTGGCTTCGAAACGATTACTTGCGATTCTGAGCCAATTCGAAAGGGAAATCGAGCCCGATTTGAATGCCGTAAAGCAGGTCCTCGATTACCTTCGAGTCAAAAGATGGAGCGACTGCAACATGGAGATCAAATTCTTGGAAGAAGAAATTGCTTTCAAGCGTTTGGATGGCGACGAGAGGGAGGTTCCTTTTCTCAGTAGCTTGGTGGGGTTCCTGAGCTACAGCAGGGGAGTGATCTTCGAAACATTGGATCATCAAAACGCGGCAAATCAAATCGATTCGAGGTGCAACGTGGAGATGTTTCGTTGCTTAAACCCTGAAGATTTCAGGTGCCCGATTTCTCTTGAGCTAATGCTTGATCCGATGACTGTATCTACAGGTCAGACATACGATCGAAGTTCGATTCAAAAATGGCTCCAATCCGGAAATATGCTCTGCCCCAAAACAGGAGAGATGATCACAAACACAGAGTTGGTACCGAATTCGATTCTTCGCAAGCTACTAAAAAATCTTTGTGAATACAACGGCGTTTCTCTTGGCAGGTCAGGAAGGCAAAGCTCCGACAAAGATCAAATTGTCGCGCCTGGTAGCCCCGTTGCTAAACAAGCAATGAAGTTTCTCTCGAGATTTCTCAGCGGAAGGCTTGCTTGCGGAACAAGCGAACAGAAAAACAAGGCTGCTTATGAAATTCGACTGCTAGCCAAATCAAACATTTTCAACAGGTCTTGTTTGATCAAGGCTGGCTCCATCCCTCCTCTGCTGAAGGTATTGAATTCCGCCGATGCATCCACGCAAGTGAATGCAATTGCAGCCTTGTTGAAGCTCGCGAAGTATGCAAGCGGAATGAAATTGATAATGTCATGGGGAGGACTACCATCAGTTGTTGCTGTTCTTAAAAATGGGTTGAGTTTAGAAGCCCGGCAATGCGCAGCTGCAACGATATTTCACCTCTCTTCGACAAGCGAGTATCGGAAACTAATTGGAGAATTACCTGAGGCCATCCCAGCTCTTGTGGAGCTGATCAGGGAAGGAACAACGTGTGGCAAAAAGAACTCCGTGGTTGCAATTCTCGGGCTGCTCCTTCGTGCCAAGAATCGACAAAAAGTGCTGGACGCAGGCATTGTTCCATTGCTAATTGACATAATATCTTCATCATCAGAAAACCCTGATCAGCTTGTTGATGATGCATTAGCAATTCTTGCAATTTTGGCCGATAATGCGGTAGGATCACACGAAATCCTCTACGCCATTGATTTGCATTTGATCATCCGCATTCTTCAAACTTCGACATCCCAAAGAGCGAAAAAGTATTGTGTTTCAACATTGCTGTCTTTGTGCATCAATGGCGGGGCGGAAGTTGTTGCTGTTTTGGCAACGGAATCATCTCTAATGCCTAGACTGTTTTCGCTCTTGACTGATGGAACATCTCATTCGATCAAGGAAGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0008150 GO:0010029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048580 GO:0050789 GO:0050793 GO:0051239 GO:0065007 GO:1900140 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

733

Amino Acids

81.21

Weight (kDa)

8.42

Isoelectric Point (pI)

41.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10560 AT1G60190
fragaria_vesca	FvH4_4g34620 FvH4_5g05140
malus_domestica	MD06G1177100.v1.1 MD13G1090900.v1.1 MD14G1183300.v1.1 MD16G1091300.v1.1
prunus_persica	Prupe.1G255000_v2.0.a1 Prupe.5G175800_v2.0.a1
pyrus_communis	pycom06g15720 pycom13g07890 pycom14g15220 pycom16g07800
rosa_chinensis	RchiOBHm_Chr4g0443981 RchiOBHm_Chr7g0193831
rosa_laevigata	RLG00000004242 RLG00000005870
rosa_multiflora	Rmu_co8252843.1_g000001 Rmu_sc0001436.1_g000032 Rmu_sc0027702.1_g000002 Rmu_sc0029481.1_g000002
rosa_roxburghii	Rroxscaffold_3G00261790 Rroxscaffold_5G00384530
rosa_rugosa	Rorug04G0348700 Rorug07G0012400
rosa_samantha	Rh4AG409400 Rh4BG420500 Rh4CG434500 Rh4DG415500 Rh7AG139000 Rh7BG139200 Rh7CG142900 Rh7DG140500
rosa_wichuraiana	Rw4G035170 Rw7G011850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	1678
Acc36I	ACCTGC	2 cut(s)	817, 1281
Acc65I	GGTACC	1 cut(s)	1225
AccB1I	GGYRCC	2 cut(s)	1080, 1225
AccII	CGCG	4 cut(s)	377, 1013, 1331, 1577
AccIII	TCCGGA	1 cut(s)	1172
AclWI	GGATC	4 cut(s)	325, 1008, 1103, 1984
AcoI	YGGCCR	1 cut(s)	1959
AcsI	RAATTY	8 cut(s)	157, 235, 242, 521, 881, 1231, 1437, 1522
AcuI	CTGAAG	2 cut(s)	1089, 1532
AfaI	GTAC	3 cut(s)	178, 447, 1227
AfiI	CCNNNNNNNGG	2 cut(s)	606, 1196
AflIII	ACRYGT	2 cut(s)	48, 1787
AjiI	CACGTC	1 cut(s)	49
AjnI	CCWGG	1 cut(s)	1333
AleI	CACNNNNGTG	1 cut(s)	1544
Alw21I	GWGCWC	1 cut(s)	735
Alw26I	GTCTC	2 cut(s)	305, 330
AlwI	GGATC	4 cut(s)	325, 1008, 1103, 1984
Ama87I	CYCGRG	3 cut(s)	320, 1372, 1820
Aor13HI	TCCGGA	1 cut(s)	1172
AoxI	GGCC	3 cut(s)	720, 1746, 1959
ApeKI	GCWGC	7 cut(s)	89, 610, 1427, 1559, 1679, 1682, 1825
ApoI	RAATTY	8 cut(s)	157, 235, 242, 521, 881, 1231, 1437, 1522
Asp700I	GAANNNNTTC	2 cut(s)	140, 405
Asp718I	GGTACC	1 cut(s)	1225
AspLEI	GCGC	3 cut(s)	288, 1333, 1679
AspS9I	GGNCC	2 cut(s)	68, 829
AsuC2I	CCSGG	2 cut(s)	398, 1669
AsuHPI	GGTGA	1 cut(s)	1688
AsuII	TTCGAA	6 cut(s)	155, 239, 470, 758, 789, 990
AsuNHI	GCTAGC	1 cut(s)	1447
AvaI	CYCGRG	3 cut(s)	320, 1372, 1820
AvaII	GGWCC	2 cut(s)	68, 829
AxyI	CCTNAGG	1 cut(s)	1743
BaeGI	GKGCMC	1 cut(s)	1085
BaeI	ACNNNNGTAYC	4 cut(s)	210, 243, 257, 290
BanI	GGYRCC	2 cut(s)	1080, 1225
BanII	GRGCYC	2 cut(s)	735, 807
BauI	CACGAG	1 cut(s)	547
BbsI	GAAGAC	2 cut(s)	505, 546
Bbv12I	GWGCWC	1 cut(s)	735
BbvI	GCAGC	7 cut(s)	76, 597, 1414, 1571, 1669, 1691, 1812
BccI	CCATC	6 cut(s)	849, 911, 1505, 1633, 1757, 2162
BceAI	ACGGC	4 cut(s)	634, 648, 803, 1291
BcgI	CGANNNNNNTGC	4 cut(s)	575, 609, 797, 831
BciT130I	CCWGG	1 cut(s)	1335
BciVI	GTATCC	1 cut(s)	258
BclI	TGATCA	5 cut(s)	1206, 1482, 1770, 1918, 2013
BcnI	CCSGG	2 cut(s)	398, 1669
BcoDI	GTCTC	2 cut(s)	305, 330
BfaI	CTAG	3 cut(s)	413, 1448, 2145
BfmI	CTRYAG	2 cut(s)	970, 1125
BfuAI	ACCTGC	2 cut(s)	817, 1281
BfuI	GTATCC	1 cut(s)	258
BisI	GCNGC	8 cut(s)	90, 611, 1014, 1428, 1560, 1680, 1683, 1826
BlsI	GCNGC	8 cut(s)	91, 612, 1015, 1429, 1561, 1681, 1684, 1827
Bme1390I	CCNGG	3 cut(s)	398, 1335, 1669
Bme18I	GGWCC	2 cut(s)	68, 829
BmeT110I	CYCGRG	3 cut(s)	320, 1372, 1820
BmgBI	CACGTC	1 cut(s)	49
BmgT120I	GGNCC	2 cut(s)	68, 829
BmiI	GGNNCC	6 cut(s)	936, 962, 1082, 1166, 1227, 1495
BmrFI	CCNGG	3 cut(s)	398, 1335, 1669
BmsI	GCATC	5 cut(s)	561, 1522, 1544, 1924, 2097
BmtI	GCTAGC	1 cut(s)	1451
BpiI	GAAGAC	2 cut(s)	505, 546
Bpu10I	CCTNAGC	1 cut(s)	965
Bpu14I	TTCGAA	6 cut(s)	155, 239, 470, 758, 789, 990
BpuEI	CTTGAG	1 cut(s)	1115
BpuMI	CCSGG	2 cut(s)	398, 1669
Bsa29I	ATCGAT	2 cut(s)	663, 1026
BsaAI	YACGTR	2 cut(s)	74, 449
BsaI	GGTCTC	1 cut(s)	305
BsaJI	CCNNGG	1 cut(s)	1806
BsaWI	WCCGGW	2 cut(s)	525, 1172
Bsc4I	CCNNNNNNNGG	2 cut(s)	606, 1196
Bse1I	ACTGG	1 cut(s)	70
Bse21I	CCTNAGG	1 cut(s)	1743
Bse3DI	GCAATG	4 cut(s)	1365, 1679, 1877, 2072
BseAI	TCCGGA	1 cut(s)	1172
BseBI	CCWGG	1 cut(s)	1335
BseCI	ATCGAT	2 cut(s)	663, 1026
BseDI	CCNNGG	1 cut(s)	1806
BseGI	GGATG	7 cut(s)	748, 922, 1497, 1535, 1749, 2016, 2039
BseLI	CCNNNNNNNGG	2 cut(s)	606, 1196
BseMI	GCAATG	4 cut(s)	1365, 1679, 1877, 2072
BseMII	CTCAG	6 cut(s)	320, 770, 956, 958, 1396, 1734
BseNI	ACTGG	1 cut(s)	70
BseRI	GAGGAG	3 cut(s)	84, 455, 1494
BseSI	GKGCMC	1 cut(s)	1085
BseXI	GCAGC	7 cut(s)	76, 597, 1414, 1571, 1669, 1691, 1812
BseYI	CCCAGC	1 cut(s)	1753
BsgI	GTGCAG	1 cut(s)	529
Bsh1236I	CGCG	4 cut(s)	377, 1013, 1331, 1577
Bsh1285I	CGRYCG	3 cut(s)	259, 562, 1144
BshFI	GGCC	3 cut(s)	722, 1748, 1961
BshNI	GGYRCC	2 cut(s)	1080, 1225
BshVI	ATCGAT	2 cut(s)	663, 1026
BsiEI	CGRYCG	3 cut(s)	259, 562, 1144
BsiHKAI	GWGCWC	1 cut(s)	735
BsiHKCI	CYCGRG	3 cut(s)	320, 1372, 1820
BsiSI	CCGG	6 cut(s)	262, 278, 397, 526, 1173, 1669
BslI	CCNNNNNNNGG	2 cut(s)	606, 1196
BsmAI	GTCTC	2 cut(s)	305, 330
BsmI	GAATGC	5 cut(s)	374, 458, 820, 1555, 2022
BsnI	GGCC	3 cut(s)	722, 1748, 1961
Bso31I	GGTCTC	1 cut(s)	305
BsoBI	CYCGRG	3 cut(s)	320, 1372, 1820
Bsp119I	TTCGAA	6 cut(s)	155, 239, 470, 758, 789, 990
Bsp1286I	GDGCHC	3 cut(s)	735, 807, 1085
Bsp13I	TCCGGA	1 cut(s)	1172
Bsp1407I	TGTACA	1 cut(s)	176
Bsp68I	TCGCGA	2 cut(s)	377, 1577
BspANI	GGCC	3 cut(s)	722, 1748, 1961
BspCNI	CTCAG	6 cut(s)	319, 771, 957, 957, 1395, 1735
BspDI	ATCGAT	2 cut(s)	663, 1026
BspEI	TCCGGA	1 cut(s)	1172
BspFNI	CGCG	4 cut(s)	377, 1013, 1331, 1577
BspLI	GGNNCC	6 cut(s)	936, 962, 1082, 1166, 1227, 1495
BspMI	ACCTGC	2 cut(s)	817, 1281
BspOI	GCTAGC	1 cut(s)	1451
BspPI	GGATC	4 cut(s)	325, 1008, 1103, 1984
BspT104I	TTCGAA	6 cut(s)	155, 239, 470, 758, 789, 990
BspT107I	GGYRCC	2 cut(s)	1080, 1225
BspTNI	GGTCTC	1 cut(s)	305
BsrDI	GCAATG	4 cut(s)	1365, 1679, 1877, 2072
BsrGI	TGTACA	1 cut(s)	176
BsrI	ACTGG	1 cut(s)	70
BssECI	CCNNGG	1 cut(s)	1806
BssSI	CACGAG	1 cut(s)	547
Bst2BI	CACGAG	1 cut(s)	547
Bst2UI	CCWGG	1 cut(s)	1335
Bst4CI	ACNGT	2 cut(s)	1120, 2151
Bst6I	CTCTTC	2 cut(s)	151, 1708
BstAPI	GCANNNNNTGC	1 cut(s)	1949
BstAUI	TGTACA	1 cut(s)	176
BstBAI	YACGTR	2 cut(s)	74, 449
BstBI	TTCGAA	6 cut(s)	155, 239, 470, 758, 789, 990
BstC8I	GCNNGC	8 cut(s)	1247, 1395, 1399, 1449, 1492, 1575, 1588, 1867
BstDEI	CTNAG	7 cut(s)	306, 779, 944, 965, 1382, 1743, 2196
BstDSI	CCRYGG	1 cut(s)	1806
BstF5I	GGATG	7 cut(s)	748, 922, 1497, 1535, 1749, 2016, 2039
BstFNI	CGCG	4 cut(s)	377, 1013, 1331, 1577
BstHHI	GCGC	3 cut(s)	288, 1333, 1679
BstMAI	GTCTC	2 cut(s)	305, 330
BstMCI	CGRYCG	3 cut(s)	259, 562, 1144
BstNI	CCWGG	1 cut(s)	1335
BstSCI	CCNGG	3 cut(s)	396, 1333, 1667
BstSFI	CTRYAG	2 cut(s)	970, 1125
BstSLI	GKGCMC	1 cut(s)	1085
BstUI	CGCG	4 cut(s)	377, 1013, 1331, 1577
BstV1I	GCAGC	7 cut(s)	76, 597, 1414, 1571, 1669, 1691, 1812
BstV2I	GAAGAC	2 cut(s)	505, 546
Bsu15I	ATCGAT	2 cut(s)	663, 1026
Bsu36I	CCTNAGG	1 cut(s)	1743
BsuI	GTATCC	1 cut(s)	258
BsuRI	GGCC	3 cut(s)	722, 1748, 1961
BsuTUI	ATCGAT	2 cut(s)	663, 1026
BtgI	CCRYGG	1 cut(s)	1806
BtgZI	GCGATG	1 cut(s)	687
BtrI	CACGTC	1 cut(s)	49
BtsCI	GGATG	7 cut(s)	748, 922, 1497, 1535, 1749, 2016, 2039
BtuMI	TCGCGA	2 cut(s)	377, 1577
BveI	ACCTGC	2 cut(s)	817, 1281
Cac8I	GCNNGC	8 cut(s)	1247, 1395, 1399, 1449, 1492, 1575, 1588, 1867
CfoI	GCGC	3 cut(s)	288, 1333, 1679
Cfr13I	GGNCC	2 cut(s)	68, 829
ClaI	ATCGAT	2 cut(s)	663, 1026
CseI	GACGC	2 cut(s)	388, 1871
Csp6I	GTAC	3 cut(s)	177, 446, 1226
CviAII	CATG	4 cut(s)	271, 430, 871, 1611
CviQI	GTAC	3 cut(s)	177, 446, 1226
DdeI	CTNAG	7 cut(s)	306, 779, 944, 965, 1382, 1743, 2196
DraI	TTTAAA	1 cut(s)	58
EaeI	YGGCCR	1 cut(s)	1959
Eam1104I	CTCTTC	2 cut(s)	151, 1708
EarI	CTCTTC	2 cut(s)	151, 1708
EciI	GGCGGA	2 cut(s)	1516, 2117
Ecl136II	GAGCTC	1 cut(s)	733
Eco24I	GRGCYC	2 cut(s)	735, 807
Eco31I	GGTCTC	1 cut(s)	305
Eco32I	GATATC	1 cut(s)	19
Eco47I	GGWCC	2 cut(s)	68, 829
Eco53kI	GAGCTC	1 cut(s)	733
Eco57I	CTGAAG	2 cut(s)	1089, 1532
Eco81I	CCTNAGG	1 cut(s)	1743
Eco88I	CYCGRG	3 cut(s)	320, 1372, 1820
EcoICRI	GAGCTC	1 cut(s)	733
EcoO109I	RGGNCCY	1 cut(s)	829
EcoRI	GAATTC	4 cut(s)	157, 235, 1231, 1522
EcoRII	CCWGG	1 cut(s)	1333
EcoRV	GATATC	1 cut(s)	19
EcoT22I	ATGCAT	2 cut(s)	1537, 1939
EcoT38I	GRGCYC	2 cut(s)	735, 807
FaeI	CATG	4 cut(s)	274, 433, 874, 1614
FalI	AAGNNNNNCTT	2 cut(s)	1381, 1413
FatI	CATG	4 cut(s)	270, 429, 870, 1610
FauI	CCCGC	1 cut(s)	2090
FbaI	TGATCA	5 cut(s)	1206, 1482, 1770, 1918, 2013
Fnu4HI	GCNGC	8 cut(s)	90, 611, 1014, 1428, 1560, 1680, 1683, 1826
FokI	GGATG	7 cut(s)	755, 929, 1484, 1522, 1736, 2003, 2026
FriOI	GRGCYC	2 cut(s)	735, 807
Fsp4HI	GCNGC	8 cut(s)	90, 611, 1014, 1428, 1560, 1680, 1683, 1826
FspBI	CTAG	3 cut(s)	413, 1448, 2145
FspI	TGCGCA	1 cut(s)	1678
GlaI	GCGC	3 cut(s)	287, 1332, 1678
GluI	GCNGC	8 cut(s)	90, 611, 1014, 1428, 1560, 1680, 1683, 1826
GsaI	CCCAGC	1 cut(s)	1757
HaeIII	GGCC	3 cut(s)	722, 1748, 1961
HapII	CCGG	6 cut(s)	262, 278, 397, 526, 1173, 1669
HgaI	GACGC	2 cut(s)	388, 1871
HhaI	GCGC	3 cut(s)	288, 1333, 1679
Hin1II	CATG	4 cut(s)	274, 433, 874, 1614
Hin6I	GCGC	3 cut(s)	286, 1331, 1677
HinP1I	GCGC	3 cut(s)	286, 1331, 1677
HindIII	AAGCTT	1 cut(s)	2193
HpaII	CCGG	6 cut(s)	262, 278, 397, 526, 1173, 1669
HphI	GGTGA	1 cut(s)	1688
Hpy166II	GTNNAC	1 cut(s)	112
Hpy8I	GTNNAC	1 cut(s)	112
Hpy99I	CGWCG	4 cut(s)	257, 382, 634, 926
HpyAV	CCTTC	9 cut(s)	326, 548, 712, 851, 1293, 1383, 1507, 1772, 1841
HpyCH4III	ACNGT	2 cut(s)	1120, 2151
HpyCH4IV	ACGT	5 cut(s)	48, 73, 448, 1041, 1787
HpyF3I	CTNAG	7 cut(s)	306, 779, 944, 965, 1382, 1743, 2196
HpySE526I	ACGT	5 cut(s)	48, 73, 448, 1041, 1787
Hsp92II	CATG	4 cut(s)	274, 433, 874, 1614
HspAI	GCGC	3 cut(s)	286, 1331, 1677
Kpn2I	TCCGGA	1 cut(s)	1172
KpnI	GGTACC	1 cut(s)	1229
Ksp22I	TGATCA	5 cut(s)	1206, 1482, 1770, 1918, 2013
LmnI	GCTCC	7 cut(s)	97, 858, 1170, 1313, 1499, 1765, 1833
Lsp1109I	GCAGC	7 cut(s)	76, 597, 1414, 1571, 1669, 1691, 1812
LweI	GCATC	5 cut(s)	561, 1522, 1544, 1924, 2097
MaeI	CTAG	3 cut(s)	413, 1448, 2145
MaeII	ACGT	5 cut(s)	48, 73, 448, 1041, 1787
MaeIII	GTNAC	1 cut(s)	8
MfeI	CAATTG	2 cut(s)	222, 1554
MhlI	GDGCHC	3 cut(s)	735, 807, 1085
MlyI	GAGTC	2 cut(s)	332, 855
MmeI	TCCRAC	3 cut(s)	516, 542, 1335
Mph1103I	ATGCAT	2 cut(s)	1537, 1939
MroI	TCCGGA	1 cut(s)	1172
MroXI	GAANNNNTTC	2 cut(s)	140, 405
MseI	TTAA	5 cut(s)	57, 102, 681, 1061, 1644
MslI	CAYNNNNRTG	1 cut(s)	1544
MspA1I	CMGCKG	3 cut(s)	482, 1386, 1682
MspI	CCGG	6 cut(s)	262, 278, 397, 526, 1173, 1669
MspR9I	CCNGG	3 cut(s)	398, 1335, 1669
MunI	CAATTG	2 cut(s)	222, 1554
Mva1269I	GAATGC	5 cut(s)	374, 458, 820, 1555, 2022
MvaI	CCWGG	1 cut(s)	1335
MvnI	CGCG	4 cut(s)	377, 1013, 1331, 1577
NciI	CCSGG	2 cut(s)	398, 1669
NheI	GCTAGC	1 cut(s)	1447
NlaIII	CATG	4 cut(s)	274, 433, 874, 1614
NlaIV	GGNNCC	6 cut(s)	936, 962, 1082, 1166, 1227, 1495
NruI	TCGCGA	2 cut(s)	377, 1577
NsbI	TGCGCA	1 cut(s)	1678
NsiI	ATGCAT	2 cut(s)	1537, 1939
NspV	TTCGAA	6 cut(s)	155, 239, 470, 758, 789, 990
OliI	CACNNNNGTG	1 cut(s)	1544
PaeR7I	CTCGAG	2 cut(s)	320, 1372
PcsI	WCGNNNNNNNCGW	5 cut(s)	45, 415, 467, 669, 710
PctI	GAATGC	5 cut(s)	374, 458, 820, 1555, 2022
PdmI	GAANNNNTTC	2 cut(s)	140, 405
PfeI	GAWTC	8 cut(s)	152, 616, 775, 1028, 1153, 1237, 1843, 2129
PkrI	GCNGC	8 cut(s)	91, 612, 1015, 1429, 1561, 1681, 1684, 1827
Ple19I	CGATCG	1 cut(s)	1144
PleI	GAGTC	2 cut(s)	331, 854
PpsI	GAGTC	2 cut(s)	331, 854
Ppu21I	YACGTR	2 cut(s)	74, 449
PpuMI	RGGWCCY	1 cut(s)	829
Psp124BI	GAGCTC	1 cut(s)	735
Psp5II	RGGWCCY	1 cut(s)	829
Psp6I	CCWGG	1 cut(s)	1333
PspFI	CCCAGC	1 cut(s)	1753
PspGI	CCWGG	1 cut(s)	1333
PspN4I	GGNNCC	6 cut(s)	936, 962, 1082, 1166, 1227, 1495
PspPI	GGNCC	2 cut(s)	68, 829
PspPPI	RGGWCCY	1 cut(s)	829
PvuI	CGATCG	1 cut(s)	1144
PvuII	CAGCTG	1 cut(s)	1682
RruI	TCGCGA	2 cut(s)	377, 1577
RsaI	GTAC	3 cut(s)	178, 447, 1227
RsaNI	GTAC	3 cut(s)	177, 446, 1226
RseI	CAYNNNNRTG	1 cut(s)	1544
SacI	GAGCTC	1 cut(s)	735
SaqAI	TTAA	5 cut(s)	57, 102, 681, 1061, 1644
SatI	GCNGC	8 cut(s)	90, 611, 1014, 1428, 1560, 1680, 1683, 1826
Sau96I	GGNCC	2 cut(s)	68, 829
SchI	GAGTC	2 cut(s)	332, 855
ScrFI	CCNGG	3 cut(s)	398, 1335, 1669
SduI	GDGCHC	3 cut(s)	735, 807, 1085
SfaNI	GCATC	5 cut(s)	561, 1522, 1544, 1924, 2097
SfcI	CTRYAG	2 cut(s)	970, 1125
Sfr274I	CTCGAG	2 cut(s)	320, 1372
SfuI	TTCGAA	6 cut(s)	155, 239, 470, 758, 789, 990
SinI	GGWCC	2 cut(s)	68, 829
SlaI	CTCGAG	2 cut(s)	320, 1372
SmiMI	CAYNNNNRTG	1 cut(s)	1544
SmlI	CTYRAG	3 cut(s)	320, 1094, 1372
SmoI	CTYRAG	3 cut(s)	320, 1094, 1372
SspMI	CTAG	3 cut(s)	413, 1448, 2145
SstI	GAGCTC	1 cut(s)	735
StyD4I	CCNGG	3 cut(s)	396, 1333, 1667
TaaI	ACNGT	2 cut(s)	1120, 2151
TaiI	ACGT	5 cut(s)	51, 76, 451, 1044, 1790
TatI	WGTACW	1 cut(s)	176
TauI	GCSGC	1 cut(s)	1016
TfiI	GAWTC	8 cut(s)	152, 616, 775, 1028, 1153, 1237, 1843, 2129
Tru1I	TTAA	5 cut(s)	57, 102, 681, 1061, 1644
Tru9I	TTAA	5 cut(s)	57, 102, 681, 1061, 1644
TseI	GCWGC	7 cut(s)	89, 610, 1427, 1559, 1679, 1682, 1825
TspDTI	ATGAA	7 cut(s)	248, 494, 690, 1376, 1449, 1610, 1890
TspGWI	ACGGA	5 cut(s)	54, 97, 400, 1795, 2141
VpaK11BI	GGWCC	2 cut(s)	68, 829
XapI	RAATTY	8 cut(s)	157, 235, 242, 521, 881, 1231, 1437, 1522
XhoI	CTCGAG	2 cut(s)	320, 1372
XmnI	GAANNNNTTC	2 cut(s)	140, 405
XspI	CTAG	3 cut(s)	413, 1448, 2145
Zsp2I	ATGCAT	2 cut(s)	1537, 1939

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.