Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0003359

Physical Location & Seq

Genomic Coordinates Forward (+)

57573730 .. 57576411

Gene Structure 2682 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004242

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2061 bp

ATGATCAAACAATTCGATCGGAGTGACCGTCGGATTCTGAAATTCCCGGCGGTTAACCCTTGCCAAGGAGTCTCTCCGGCGACCCTTCTTGTCTCTTTGACAATTCTCTCCCGCAACATACTCAATTTCCAATCCACATGCTTAGCAACCCAAAAGCGAAACTGCAGAGAAACAATCCGCCAGATTAGTATTCTTCACATTTTCTTTGAGGAGATTTGTGCCGGTGAGCTGGTTCTTTCCGACTCGGTGGCTCTCAGCTTCTCTGAGCTCCACCTCACCTTGCAAAAAATCAGGTTTTTGTTGGAGGATTGCACTAGGGAAGGTGCAAGGCTGTGGATTCTCACAAAATGTGAGTTTCTCGCAACTCAGTTTCGGATTCTAATACGAGCAGTCTCCACCGCGCTTGATGTTCTTCCTTTGAGCTTGATCGATGTAGAAGATGAAGTGAAGGAGATGGTTGAATTAGTAAGGAGGCAATCGAGGAAGGGCAAATTTGAGCTTCATCCGGATGATGTAAGTGCCAAGACGTTGGTGCTTTCGATATTGGATCAGTTCGAGAAGAGAATTGAGCCCGATTCGGGTGATATGAAGCGGGTTCTTGATTACCTTGGAATCAGAAGCTGGAGGGAGTGTAACATGGAGATTAAGTTCTTGGAGGAAGAAATTACTTTCGAGTGTTCGGCTCGCGAAGGAAGAGAGGTTCCATTTCTGAGCAGCTTGGTTGGGTTTTTGAGCTACTGCAGGGGAGTGATTTTCGAAACGATGGATAATCTAAACCTCGATGAAAGTCAAGCCGATTTCAGGTCCAACATGGAGGTCTTCAGTTGCTTAAACACTGAGGATTTTAGGTGCCCAATTTCGCTTGAGCTAATGCTTGATCCAGTGATTGTATCTACAGGGCAGACTTATGATCGTTCTTCAATTCAAAAATGGCTCAAAGGTGGAAACTTGCTCTGTCCCAATACAGGGGAGAAGCTCATAAACACTGACTTGGTGCCCAATTTGATTCTCCAAAAGCTGATCAGAAACTTCTGTGCCTACAACGGTGTTTCCCTTGGAAGGTTGGGAAAACAAAGCAGTGACATAACACGAACAATTGTGCCCAAGAGCCCGGTTGCTTCGGAATCCATGAAGTTTCTCTCAATGTTTCTCACCACTAGGCTTGCATTTGGTACTAGTGAACAGAGAAACAAGGCTGCATATGAGATTCGTTTGCTTGCAAAATCGAACATTTTCAACAGGTCTTGTTTGATCAATGCAGGAGCAGTACCACCTCTATTGAACCTATTGTGTTCCACAGGTTCATGTACACAAGAGAATGCAATGGCGGCCTTGTTGAAGCTCTCGAAATATGGAAGTGGCAAGAGATTGATAGTTGAATGCAGGGGACTAACTTCAATTCTTGCTGTGCTTAAACATGGACTGACATGGGAAGCGAGGCAAAGTGCAGCTGCAACAATTTTCTATCTCACTTCGGTGAAGGAGTATCGGAAATTGATCGGAGAAACACCTGAGGCTATCCGGGGTCTTGTGGATTTGATGAAGGAAGGAACACCTTGTGGGAAGAAAAATGCTGTGGTAGCGATTTTCGGGCTTCTTCTCTTGCCCAAAAACCACCATAGAGTGCTTGAAGCAGGCGCTGTTCCATTGCTAATTGATATACTAGCCTCATCAGAAAAAGTCGAGCTTCTAAGTGACACACTAGCAGTTGTCTCATTCTTAGCTGAAAACGTTGAAGGAGCATTTGCAATTCTAAACTCGAAATCCTTGCATCTGATCACCGGCATTCTTCAATCGTCAACATCCCAAACTGTGAAAGAGTACTGTGTTTCGACATTGCTGGCTTTGTGCATTAATGGTGGTGTGGAAGTTGTTGATCTTTTAGCCAAGGACCAATCGTTAATGGCTTCACTATTTTCGCTTTTGACAGAGGGAACCTCCAATGCGGGCAAGAAATCGCGTGCCCTCATCAAAGTTCTGCAGAGCTTCCATGAAACCAGCTCCTCCAGATGGATCATAAACTCTGCAGTTCCATGTGACCTTGCCATTCATGATCGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0008150 GO:0010029 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048580 GO:0050789 GO:0050793 GO:0051239 GO:0065007 GO:1900140 GO:2000026

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

687

Amino Acids

76.24

Weight (kDa)

7.97

Isoelectric Point (pI)

46.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUB10_N	PF25368	52 - 162	3.4e-11	PUB10-like, N-terminal domain
U-box	PF04564	280 - 346	4.8e-16	U-box domain
ARM_PUB	PF25598	394 - 662	4.1e-15	Plant U-box protein ARM repeat region
ARM_ARMC5	PF24768	536 - 675	2e-06	ARMC5

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003359)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10560 AT1G60190
fragaria_vesca	FvH4_4g34620 FvH4_5g05140
malus_domestica	MD06G1177100.v1.1 MD13G1090900.v1.1 MD14G1183300.v1.1 MD16G1091300.v1.1
prunus_persica	Prupe.1G255000_v2.0.a1 Prupe.5G175800_v2.0.a1
pyrus_communis	pycom06g15720 pycom13g07890 pycom14g15220 pycom16g07800
rosa_chinensis	RchiOBHm_Chr4g0443981 RchiOBHm_Chr7g0193831
rosa_laevigata	RLG00000004242 RLG00000005870
rosa_multiflora	Rmu_co8252843.1_g000001 Rmu_sc0001436.1_g000032 Rmu_sc0027702.1_g000002 Rmu_sc0029481.1_g000002
rosa_roxburghii	Rroxscaffold_3G00261790 Rroxscaffold_5G00384530
rosa_rugosa	Rorug04G0348700 Rorug07G0012400
rosa_samantha	Rh4AG409400 Rh4BG420500 Rh4CG434500 Rh4DG415500 Rh7AG139000 Rh7BG139200 Rh7CG142900 Rh7DG140500
rosa_wichuraiana	Rw4G035170 Rw7G011850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	849, 994
AccII	CGCG	3 cut(s)	401, 687, 1960
AccIII	TCCGGA	1 cut(s)	505
AciI	CCGC	7 cut(s)	50, 112, 178, 399, 592, 1328, 1946
AclI	AACGTT	1 cut(s)	1731
AclWI	GGATC	3 cut(s)	555, 872, 2021
AcsI	RAATTY	2 cut(s)	41, 491
AcuI	CTGAAG	1 cut(s)	805
AdeI	CACNNNGTG	1 cut(s)	1559
AfaI	GTAC	4 cut(s)	1174, 1269, 1309, 1823
AfiI	CCNNNNNNNGG	7 cut(s)	65, 578, 801, 965, 966, 1059, 2010
AhlI	ACTAGT	1 cut(s)	1175
AleI	CACNNNNGTG	1 cut(s)	1475
AloI	GAACNNNNNNTCC	4 cut(s)	632, 664, 684, 716
Alw21I	GWGCWC	1 cut(s)	270
Alw26I	GTCTC	4 cut(s)	76, 97, 397, 1717
AlwI	GGATC	3 cut(s)	555, 872, 2021
AlwNI	CAGNNNCTG	2 cut(s)	621, 1640
Aor13HI	TCCGGA	1 cut(s)	505
AoxI	GGCC	1 cut(s)	1329
ApeKI	GCWGC	4 cut(s)	714, 1196, 1448, 1451
ApoI	RAATTY	2 cut(s)	41, 491
AseI	ATTAAT	1 cut(s)	1854
Asp700I	GAANNNNTTC	1 cut(s)	1232
AspLEI	GCGC	2 cut(s)	403, 1640
AspS9I	GGNCC	2 cut(s)	804, 1891
AsuC2I	CCSGG	3 cut(s)	47, 1112, 1523
AsuHPI	GGTGA	6 cut(s)	236, 268, 593, 1144, 1489, 1771
AsuII	TTCGAA	1 cut(s)	756
AvaII	GGWCC	2 cut(s)	804, 1891
AxyI	CCTNAGG	1 cut(s)	1512
BaeGI	GKGCMC	4 cut(s)	854, 999, 1104, 1966
BanI	GGYRCC	2 cut(s)	849, 994
BanII	GRGCYC	3 cut(s)	270, 573, 1112
BbsI	GAAGAC	1 cut(s)	811
Bbv12I	GWGCWC	1 cut(s)	270
BbvI	GCAGC	4 cut(s)	726, 1183, 1438, 1460
BccI	CCATC	3 cut(s)	448, 757, 2004
BcgI	CGANNNNNNTGC	2 cut(s)	1750, 1784
BclI	TGATCA	4 cut(s)	3, 1020, 1251, 1776
BcnI	CCSGG	3 cut(s)	47, 1112, 1523
BcoDI	GTCTC	4 cut(s)	76, 97, 397, 1717
BcuI	ACTAGT	1 cut(s)	1175
BfaI	CTAG	5 cut(s)	315, 1158, 1176, 1664, 1703
BfmI	CTRYAG	5 cut(s)	163, 739, 894, 1979, 2025
BfoI	RGCGCY	1 cut(s)	1641
BisI	GCNGC	5 cut(s)	715, 1197, 1329, 1449, 1452
BlpI	GCTNAGC	1 cut(s)	142
BlsI	GCNGC	5 cut(s)	716, 1198, 1330, 1450, 1453
BmcAI	AGTACT	1 cut(s)	1823
Bme1390I	CCNGG	3 cut(s)	47, 1112, 1523
Bme18I	GGWCC	2 cut(s)	804, 1891
BmgT120I	GGNCC	2 cut(s)	804, 1891
BmiI	GGNNCC	4 cut(s)	702, 851, 996, 1936
BmrFI	CCNGG	3 cut(s)	47, 1112, 1523
BmsI	GCATC	1 cut(s)	1780
BpiI	GAAGAC	1 cut(s)	811
BplI	GAGNNNNNCTC	2 cut(s)	1922, 1954
BpmI	CTGGAG	2 cut(s)	643, 1990
Bpu1102I	GCTNAGC	1 cut(s)	142
Bpu14I	TTCGAA	1 cut(s)	756
BpuEI	CTTGAG	1 cut(s)	884
BpuMI	CCSGG	3 cut(s)	47, 1112, 1523
Bsa29I	ATCGAT	1 cut(s)	429
BsaJI	CCNNGG	5 cut(s)	64, 607, 1054, 1522, 1887
BsaWI	WCCGGW	1 cut(s)	505
BsaXI	ACNNNNNCTCC	6 cut(s)	13, 43, 616, 632, 646, 662
Bsc4I	CCNNNNNNNGG	7 cut(s)	65, 578, 801, 965, 966, 1059, 2010
Bse118I	RCCGGY	2 cut(s)	221, 1781
Bse1I	ACTGG	1 cut(s)	881
Bse21I	CCTNAGG	1 cut(s)	1512
Bse3DI	GCAATG	3 cut(s)	1329, 1646, 1835
BseAI	TCCGGA	1 cut(s)	505
BseCI	ATCGAT	1 cut(s)	429
BseDI	CCNNGG	5 cut(s)	64, 607, 1054, 1522, 1887
BseGI	GGATG	3 cut(s)	502, 514, 1802
BseLI	CCNNNNNNNGG	7 cut(s)	65, 578, 801, 965, 966, 1059, 2010
BseMI	GCAATG	3 cut(s)	1329, 1646, 1835
BseMII	CTCAG	6 cut(s)	255, 268, 380, 701, 828, 1503
BseNI	ACTGG	1 cut(s)	881
BseRI	GAGGAG	2 cut(s)	224, 1993
BseSI	GKGCMC	4 cut(s)	854, 999, 1104, 1966
BseXI	GCAGC	4 cut(s)	726, 1183, 1438, 1460
BsgI	GTGCAG	1 cut(s)	1467
Bsh1236I	CGCG	3 cut(s)	401, 687, 1960
Bsh1285I	CGRYCG	1 cut(s)	19
BshFI	GGCC	1 cut(s)	1331
BshNI	GGYRCC	2 cut(s)	849, 994
BshVI	ATCGAT	1 cut(s)	429
BsiEI	CGRYCG	1 cut(s)	19
BsiHKAI	GWGCWC	1 cut(s)	270
BsiSI	CCGG	7 cut(s)	47, 77, 222, 506, 1112, 1522, 1782
BslFI	GGGAC	2 cut(s)	942, 1401
BslI	CCNNNNNNNGG	7 cut(s)	65, 578, 801, 965, 966, 1059, 2010
BsmAI	GTCTC	4 cut(s)	76, 97, 397, 1717
BsmFI	GGGAC	2 cut(s)	942, 1401
BsmI	GAATGC	3 cut(s)	1324, 1385, 1785
BsnI	GGCC	1 cut(s)	1331
Bsp119I	TTCGAA	1 cut(s)	756
Bsp1286I	GDGCHC	7 cut(s)	270, 573, 854, 999, 1104, 1112, 1966
Bsp13I	TCCGGA	1 cut(s)	505
Bsp1407I	TGTACA	1 cut(s)	1307
Bsp1720I	GCTNAGC	1 cut(s)	142
Bsp68I	TCGCGA	1 cut(s)	687
BspACI	CCGC	7 cut(s)	50, 112, 178, 399, 592, 1328, 1946
BspANI	GGCC	1 cut(s)	1331
BspCNI	CTCAG	6 cut(s)	256, 267, 379, 702, 829, 1504
BspDI	ATCGAT	1 cut(s)	429
BspEI	TCCGGA	1 cut(s)	505
BspFNI	CGCG	3 cut(s)	401, 687, 1960
BspHI	TCATGA	1 cut(s)	2050
BspLI	GGNNCC	4 cut(s)	702, 851, 996, 1936
BspMAI	CTGCAG	4 cut(s)	167, 743, 1983, 2029
BspPI	GGATC	3 cut(s)	555, 872, 2021
BspT104I	TTCGAA	1 cut(s)	756
BspT107I	GGYRCC	2 cut(s)	849, 994
BsrDI	GCAATG	3 cut(s)	1329, 1646, 1835
BsrFI	RCCGGY	2 cut(s)	221, 1781
BsrGI	TGTACA	1 cut(s)	1307
BsrI	ACTGG	1 cut(s)	881
BssAI	RCCGGY	2 cut(s)	221, 1781
BssECI	CCNNGG	5 cut(s)	64, 607, 1054, 1522, 1887
BssT1I	CCWWGG	4 cut(s)	64, 607, 1054, 1887
Bst4CI	ACNGT	4 cut(s)	29, 1046, 1813, 1826
Bst6I	CTCTTC	2 cut(s)	554, 688
BstAUI	TGTACA	1 cut(s)	1307
BstBI	TTCGAA	1 cut(s)	756
BstC8I	GCNNGC	7 cut(s)	685, 1164, 1218, 1636, 1842, 1948, 1962
BstDEI	CTNAG	9 cut(s)	142, 254, 264, 366, 710, 837, 1512, 1691, 1720
BstENI	CCTNNNNNAGG	1 cut(s)	63
BstF5I	GGATG	3 cut(s)	502, 514, 1802
BstFNI	CGCG	3 cut(s)	401, 687, 1960
BstH2I	RGCGCY	1 cut(s)	1641
BstHHI	GCGC	2 cut(s)	403, 1640
BstMAI	GTCTC	4 cut(s)	76, 97, 397, 1717
BstMCI	CGRYCG	1 cut(s)	19
BstMWI	GCNNNNNNNGC	2 cut(s)	1328, 1580
BstNSI	RCATGY	1 cut(s)	141
BstSCI	CCNGG	3 cut(s)	45, 1110, 1521
BstSFI	CTRYAG	5 cut(s)	163, 739, 894, 1979, 2025
BstSLI	GKGCMC	4 cut(s)	854, 999, 1104, 1966
BstUI	CGCG	3 cut(s)	401, 687, 1960
BstV1I	GCAGC	4 cut(s)	726, 1183, 1438, 1460
BstV2I	GAAGAC	1 cut(s)	811
BstXI	CCANNNNNNTGG	1 cut(s)	529
Bsu15I	ATCGAT	1 cut(s)	429
Bsu36I	CCTNAGG	1 cut(s)	1512
BsuRI	GGCC	1 cut(s)	1331
BsuTUI	ATCGAT	1 cut(s)	429
BtsCI	GGATG	3 cut(s)	502, 514, 1802
BtsI	GCAGTG	1 cut(s)	1084
BtsIMutI	CAGTG	4 cut(s)	834, 888, 984, 1084
BtuMI	TCGCGA	1 cut(s)	687
Cac8I	GCNNGC	7 cut(s)	685, 1164, 1218, 1636, 1842, 1948, 1962
CaiI	CAGNNNCTG	2 cut(s)	621, 1640
CciI	TCATGA	1 cut(s)	2050
CfoI	GCGC	2 cut(s)	403, 1640
Cfr10I	RCCGGY	2 cut(s)	221, 1781
Cfr13I	GGNCC	2 cut(s)	804, 1891
ClaI	ATCGAT	1 cut(s)	429
Csp6I	GTAC	4 cut(s)	1173, 1268, 1308, 1822
CspCI	CAANNNNNGTGG	6 cut(s)	385, 420, 1144, 1179, 1260, 1295
CviQI	GTAC	4 cut(s)	1173, 1268, 1308, 1822
DdeI	CTNAG	9 cut(s)	142, 254, 264, 366, 710, 837, 1512, 1691, 1720
DraIII	CACNNNGTG	1 cut(s)	1559
Eam1104I	CTCTTC	2 cut(s)	554, 688
EarI	CTCTTC	2 cut(s)	554, 688
EciI	GGCGGA	1 cut(s)	167
Ecl136II	GAGCTC	1 cut(s)	268
Eco130I	CCWWGG	4 cut(s)	64, 607, 1054, 1887
Eco24I	GRGCYC	3 cut(s)	270, 573, 1112
Eco47I	GGWCC	2 cut(s)	804, 1891
Eco53kI	GAGCTC	1 cut(s)	268
Eco57I	CTGAAG	1 cut(s)	805
Eco81I	CCTNAGG	1 cut(s)	1512
EcoICRI	GAGCTC	1 cut(s)	268
EcoNI	CCTNNNNNAGG	1 cut(s)	63
EcoT14I	CCWWGG	4 cut(s)	64, 607, 1054, 1887
EcoT38I	GRGCYC	3 cut(s)	270, 573, 1112
ErhI	CCWWGG	4 cut(s)	64, 607, 1054, 1887
FalI	AAGNNNNNCTT	2 cut(s)	1671, 1703
FaqI	GGGAC	2 cut(s)	942, 1401
FauI	CCCGC	3 cut(s)	119, 585, 1939
FauNDI	CATATG	1 cut(s)	1201
FbaI	TGATCA	4 cut(s)	3, 1020, 1251, 1776
Fnu4HI	GCNGC	5 cut(s)	715, 1197, 1329, 1449, 1452
FokI	GGATG	3 cut(s)	489, 521, 1789
FriOI	GRGCYC	3 cut(s)	270, 573, 1112
Fsp4HI	GCNGC	5 cut(s)	715, 1197, 1329, 1449, 1452
FspBI	CTAG	5 cut(s)	315, 1158, 1176, 1664, 1703
GlaI	GCGC	2 cut(s)	402, 1639
GluI	GCNGC	5 cut(s)	715, 1197, 1329, 1449, 1452
GsuI	CTGGAG	2 cut(s)	643, 1990
HaeII	RGCGCY	1 cut(s)	1641
HaeIII	GGCC	1 cut(s)	1331
HapII	CCGG	7 cut(s)	47, 77, 222, 506, 1112, 1522, 1782
HhaI	GCGC	2 cut(s)	403, 1640
Hin6I	GCGC	2 cut(s)	401, 1638
HinP1I	GCGC	2 cut(s)	401, 1638
HincII	GTYRAC	2 cut(s)	55, 1800
HindII	GTYRAC	2 cut(s)	55, 1800
HpaI	GTTAAC	1 cut(s)	55
HpaII	CCGG	7 cut(s)	47, 77, 222, 506, 1112, 1522, 1782
HphI	GGTGA	6 cut(s)	236, 268, 593, 1144, 1489, 1771
Hpy166II	GTNNAC	4 cut(s)	55, 1181, 1310, 1800
Hpy188III	TCNNGA	7 cut(s)	506, 556, 599, 686, 1345, 2007, 2051
Hpy8I	GTNNAC	4 cut(s)	55, 1181, 1310, 1800
Hpy99I	CGWCG	1 cut(s)	33
HpyCH4III	ACNGT	4 cut(s)	29, 1046, 1813, 1826
HpyCH4IV	ACGT	2 cut(s)	527, 1731
HpyF10VI	GCNNNNNNNGC	2 cut(s)	1328, 1580
HpyF3I	CTNAG	9 cut(s)	142, 254, 264, 366, 710, 837, 1512, 1691, 1720
HpySE526I	ACGT	2 cut(s)	527, 1731
HspAI	GCGC	2 cut(s)	401, 1638
Kpn2I	TCCGGA	1 cut(s)	505
Ksp22I	TGATCA	4 cut(s)	3, 1020, 1251, 1776
KspAI	GTTAAC	1 cut(s)	55
LmnI	GCTCC	4 cut(s)	273, 1262, 1739, 2006
Lsp1109I	GCAGC	4 cut(s)	726, 1183, 1438, 1460
LweI	GCATC	1 cut(s)	1780
MaeI	CTAG	5 cut(s)	315, 1158, 1176, 1664, 1703
MaeII	ACGT	2 cut(s)	527, 1731
MaeIII	GTNAC	5 cut(s)	23, 632, 1079, 1694, 2036
MfeI	CAATTG	1 cut(s)	1095
MhlI	GDGCHC	7 cut(s)	270, 573, 854, 999, 1104, 1112, 1966
MlyI	GAGTC	2 cut(s)	78, 236
MmeI	TCCRAC	4 cut(s)	11, 264, 282, 831
MroI	TCCGGA	1 cut(s)	505
MroXI	GAANNNNTTC	1 cut(s)	1232
MseI	TTAA	6 cut(s)	54, 645, 830, 1413, 1854, 1901
MslI	CAYNNNNRTG	2 cut(s)	507, 1475
MspA1I	CMGCKG	1 cut(s)	1451
MspI	CCGG	7 cut(s)	47, 77, 222, 506, 1112, 1522, 1782
MspR9I	CCNGG	3 cut(s)	47, 1112, 1523
MunI	CAATTG	1 cut(s)	1095
Mva1269I	GAATGC	3 cut(s)	1324, 1385, 1785
MvnI	CGCG	3 cut(s)	401, 687, 1960
MwoI	GCNNNNNNNGC	2 cut(s)	1328, 1580
NciI	CCSGG	3 cut(s)	47, 1112, 1523
NdeI	CATATG	1 cut(s)	1201
NlaIV	GGNNCC	4 cut(s)	702, 851, 996, 1936
NmuCI	GTSAC	4 cut(s)	23, 1079, 1694, 2036
NruI	TCGCGA	1 cut(s)	687
NspI	RCATGY	1 cut(s)	141
NspV	TTCGAA	1 cut(s)	756
OliI	CACNNNNGTG	1 cut(s)	1475
PagI	TCATGA	1 cut(s)	2050
PcsI	WCGNNNNNNNCGW	1 cut(s)	25
PctI	GAATGC	3 cut(s)	1324, 1385, 1785
PdmI	GAANNNNTTC	1 cut(s)	1232
PfeI	GAWTC	8 cut(s)	34, 337, 376, 575, 612, 1006, 1124, 1207
PkrI	GCNGC	5 cut(s)	716, 1198, 1330, 1450, 1453
Ple19I	CGATCG	1 cut(s)	19
PleI	GAGTC	2 cut(s)	77, 236
PpsI	GAGTC	2 cut(s)	77, 236
PshBI	ATTAAT	1 cut(s)	1854
Psp124BI	GAGCTC	1 cut(s)	270
Psp1406I	AACGTT	1 cut(s)	1731
PspN4I	GGNNCC	4 cut(s)	702, 851, 996, 1936
PspPI	GGNCC	2 cut(s)	804, 1891
PstI	CTGCAG	4 cut(s)	167, 743, 1983, 2029
PstNI	CAGNNNCTG	2 cut(s)	621, 1640
PvuI	CGATCG	1 cut(s)	19
PvuII	CAGCTG	1 cut(s)	1451
RruI	TCGCGA	1 cut(s)	687
RsaI	GTAC	4 cut(s)	1174, 1269, 1309, 1823
RsaNI	GTAC	4 cut(s)	1173, 1268, 1308, 1822
RseI	CAYNNNNRTG	2 cut(s)	507, 1475
SacI	GAGCTC	1 cut(s)	270
SaqAI	TTAA	6 cut(s)	54, 645, 830, 1413, 1854, 1901
SatI	GCNGC	5 cut(s)	715, 1197, 1329, 1449, 1452
Sau96I	GGNCC	2 cut(s)	804, 1891
ScaI	AGTACT	1 cut(s)	1823
SchI	GAGTC	2 cut(s)	78, 236
ScrFI	CCNGG	3 cut(s)	47, 1112, 1523
SduI	GDGCHC	7 cut(s)	270, 573, 854, 999, 1104, 1112, 1966
SfaNI	GCATC	1 cut(s)	1780
SfcI	CTRYAG	5 cut(s)	163, 739, 894, 1979, 2025
SfuI	TTCGAA	1 cut(s)	756
SinI	GGWCC	2 cut(s)	804, 1891
SmiMI	CAYNNNNRTG	2 cut(s)	507, 1475
SmlI	CTYRAG	1 cut(s)	863
SmoI	CTYRAG	1 cut(s)	863
SpeI	ACTAGT	1 cut(s)	1175
SsiI	CCGC	7 cut(s)	50, 112, 178, 399, 592, 1328, 1946
SspMI	CTAG	5 cut(s)	315, 1158, 1176, 1664, 1703
SstI	GAGCTC	1 cut(s)	270
StyD4I	CCNGG	3 cut(s)	45, 1110, 1521
StyI	CCWWGG	4 cut(s)	64, 607, 1054, 1887
TaaI	ACNGT	4 cut(s)	29, 1046, 1813, 1826
TaiI	ACGT	2 cut(s)	530, 1734
TatI	WGTACW	2 cut(s)	1307, 1821
TauI	GCSGC	1 cut(s)	1331
TfiI	GAWTC	8 cut(s)	34, 337, 376, 575, 612, 1006, 1124, 1207
Tru1I	TTAA	6 cut(s)	54, 645, 830, 1413, 1854, 1901
Tru9I	TTAA	6 cut(s)	54, 645, 830, 1413, 1854, 1901
TscAI	CASTG	4 cut(s)	841, 888, 991, 1084
TseFI	GTSAC	4 cut(s)	23, 1079, 1694, 2036
TseI	GCWGC	4 cut(s)	714, 1196, 1448, 1451
Tsp45I	GTSAC	4 cut(s)	23, 1079, 1694, 2036
TspDTI	ATGAA	9 cut(s)	456, 491, 602, 798, 1145, 1293, 1556, 2007, 2039
TspRI	CASTG	4 cut(s)	841, 888, 991, 1084
VpaK11BI	GGWCC	2 cut(s)	804, 1891
VspI	ATTAAT	1 cut(s)	1854
XagI	CCTNNNNNAGG	1 cut(s)	63
XapI	RAATTY	2 cut(s)	41, 491
XceI	RCATGY	1 cut(s)	141
XmnI	GAANNNNTTC	1 cut(s)	1232
XspI	CTAG	5 cut(s)	315, 1158, 1176, 1664, 1703
ZrmI	AGTACT	1 cut(s)	1823

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.