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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g35071 |
| rosa_laevigata | RLG00000005813 RLG00000024320 |
| rosa_multiflora | Rmu_sc0015511.1_g000015 Rmu_sc0017177.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00263410 Rroxscaffold_5G00385140 |
| rosa_rugosa | Rorug04G0043700.1 Rorug04G0354400 |
| rosa_samantha | Rh1AG147800 Rh1CG139200 Rh1CG282800 Rh3AG061700 Rh3BG063500 Rh3CG062400 Rh4AG414600 Rh4CG115300 Rh4CG441200 Rh4DG422200 Rh6CG148400 Rh7CG251900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 47 |
| AciI | CCGC | 5 cut(s) | 23, 35, 47, 284, 383 |
| AfaI | GTAC | 1 cut(s) | 96 |
| AgsI | TTSAA | 2 cut(s) | 157, 304 |
| AjiI | CACGTC | 1 cut(s) | 18 |
| AluBI | AGCT | 2 cut(s) | 224, 300 |
| AluI | AGCT | 2 cut(s) | 224, 300 |
| AoxI | GGCC | 4 cut(s) | 90, 254, 326, 393 |
| ApeKI | GCWGC | 1 cut(s) | 68 |
| AspS9I | GGNCC | 1 cut(s) | 90 |
| AsuC2I | CCSGG | 1 cut(s) | 375 |
| AsuHPI | GGTGA | 2 cut(s) | 154, 304 |
| BbvI | GCAGC | 1 cut(s) | 80 |
| BceAI | ACGGC | 3 cut(s) | 56, 77, 190 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 184, 218 |
| BclI | TGATCA | 1 cut(s) | 54 |
| BcnI | CCSGG | 1 cut(s) | 375 |
| BisI | GCNGC | 3 cut(s) | 69, 284, 383 |
| BlsI | GCNGC | 3 cut(s) | 70, 285, 384 |
| Bme1390I | CCNGG | 1 cut(s) | 375 |
| BmgBI | CACGTC | 1 cut(s) | 18 |
| BmgT120I | GGNCC | 1 cut(s) | 90 |
| BmrFI | CCNGG | 1 cut(s) | 375 |
| BmsI | GCATC | 5 cut(s) | 192, 201, 270, 342, 357 |
| BpuMI | CCSGG | 1 cut(s) | 375 |
| BsaJI | CCNNGG | 1 cut(s) | 206 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 191, 221, 252, 282 |
| Bse118I | RCCGGY | 1 cut(s) | 190 |
| BseDI | CCNNGG | 1 cut(s) | 206 |
| BseGI | GGATG | 1 cut(s) | 216 |
| BseRI | GAGGAG | 1 cut(s) | 156 |
| BseXI | GCAGC | 1 cut(s) | 80 |
| BsgI | GTGCAG | 1 cut(s) | 87 |
| Bsh1236I | CGCG | 1 cut(s) | 47 |
| BshFI | GGCC | 4 cut(s) | 92, 256, 328, 395 |
| BsiSI | CCGG | 2 cut(s) | 191, 375 |
| BsnI | GGCC | 4 cut(s) | 92, 256, 328, 395 |
| Bsp143I | GATC | 1 cut(s) | 54 |
| BspACI | CCGC | 5 cut(s) | 23, 35, 47, 284, 383 |
| BspANI | GGCC | 4 cut(s) | 92, 256, 328, 395 |
| BspFNI | CGCG | 1 cut(s) | 47 |
| BsrFI | RCCGGY | 1 cut(s) | 190 |
| BssAI | RCCGGY | 1 cut(s) | 190 |
| BssECI | CCNNGG | 1 cut(s) | 206 |
| BssMI | GATC | 1 cut(s) | 54 |
| BstC8I | GCNNGC | 2 cut(s) | 33, 393 |
| BstDSI | CCRYGG | 1 cut(s) | 206 |
| BstEII | GGTNACC | 1 cut(s) | 160 |
| BstF5I | GGATG | 1 cut(s) | 216 |
| BstFNI | CGCG | 1 cut(s) | 47 |
| BstKTI | GATC | 1 cut(s) | 57 |
| BstMBI | GATC | 1 cut(s) | 54 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 191, 211, 246, 361, 388 |
| BstPI | GGTNACC | 1 cut(s) | 160 |
| BstSCI | CCNGG | 1 cut(s) | 373 |
| BstUI | CGCG | 1 cut(s) | 47 |
| BstV1I | GCAGC | 1 cut(s) | 80 |
| BsuRI | GGCC | 4 cut(s) | 92, 256, 328, 395 |
| BtgI | CCRYGG | 1 cut(s) | 206 |
| BtrI | CACGTC | 1 cut(s) | 18 |
| BtsCI | GGATG | 1 cut(s) | 216 |
| BtsI | GCAGTG | 1 cut(s) | 132 |
| BtsIMutI | CAGTG | 1 cut(s) | 132 |
| Cac8I | GCNNGC | 2 cut(s) | 33, 393 |
| Cfr10I | RCCGGY | 1 cut(s) | 190 |
| Cfr13I | GGNCC | 1 cut(s) | 90 |
| Csp6I | GTAC | 1 cut(s) | 95 |
| CviAII | CATG | 4 cut(s) | 58, 232, 250, 322 |
| CviJI | RGCY | 8 cut(s) | 5, 71, 92, 224, 256, 300, 328, 395 |
| CviKI_1 | RGCY | 8 cut(s) | 5, 71, 92, 224, 256, 300, 328, 395 |
| CviQI | GTAC | 1 cut(s) | 95 |
| DpnI | GATC | 1 cut(s) | 56 |
| DpnII | GATC | 1 cut(s) | 54 |
| Eco91I | GGTNACC | 1 cut(s) | 160 |
| EcoO65I | GGTNACC | 1 cut(s) | 160 |
| FaeI | CATG | 4 cut(s) | 61, 235, 253, 325 |
| FaiI | YATR | 6 cut(s) | 59, 132, 233, 251, 323, 380 |
| FatI | CATG | 4 cut(s) | 57, 231, 249, 321 |
| FbaI | TGATCA | 1 cut(s) | 54 |
| Fnu4HI | GCNGC | 3 cut(s) | 69, 284, 383 |
| FokI | GGATG | 1 cut(s) | 223 |
| Fsp4HI | GCNGC | 3 cut(s) | 69, 284, 383 |
| GluI | GCNGC | 3 cut(s) | 69, 284, 383 |
| HaeIII | GGCC | 4 cut(s) | 92, 256, 328, 395 |
| HapII | CCGG | 2 cut(s) | 191, 375 |
| Hin1II | CATG | 4 cut(s) | 61, 235, 253, 325 |
| HindIII | AAGCTT | 1 cut(s) | 298 |
| HinfI | GANTC | 1 cut(s) | 267 |
| HpaII | CCGG | 2 cut(s) | 191, 375 |
| HphI | GGTGA | 2 cut(s) | 154, 304 |
| Hpy188I | TCNGA | 1 cut(s) | 87 |
| Hpy188III | TCNNGA | 2 cut(s) | 271, 343 |
| Hpy99I | CGWCG | 1 cut(s) | 22 |
| HpyAV | CCTTC | 4 cut(s) | 74, 151, 169, 190 |
| HpyCH4IV | ACGT | 1 cut(s) | 17 |
| HpyCH4V | TGCA | 3 cut(s) | 68, 130, 185 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 191, 211, 246, 361, 388 |
| HpySE526I | ACGT | 1 cut(s) | 17 |
| Hsp92II | CATG | 4 cut(s) | 61, 235, 253, 325 |
| Ksp22I | TGATCA | 1 cut(s) | 54 |
| Kzo9I | GATC | 1 cut(s) | 54 |
| LpnPI | CCDG | 5 cut(s) | 204, 284, 328, 377, 388 |
| Lsp1109I | GCAGC | 1 cut(s) | 80 |
| LweI | GCATC | 5 cut(s) | 192, 201, 270, 342, 357 |
| MaeII | ACGT | 1 cut(s) | 17 |
| MaeIII | GTNAC | 3 cut(s) | 13, 160, 310 |
| MalI | GATC | 1 cut(s) | 56 |
| MboI | GATC | 1 cut(s) | 54 |
| MfeI | CAATTG | 2 cut(s) | 180, 288 |
| MluCI | AATT | 2 cut(s) | 180, 288 |
| MlyI | GAGTC | 1 cut(s) | 261 |
| MmeI | TCCRAC | 1 cut(s) | 55 |
| MnlI | CCTC | 9 cut(s) | 81, 108, 114, 134, 225, 246, 311, 318, 366 |
| MspI | CCGG | 2 cut(s) | 191, 375 |
| MspR9I | CCNGG | 1 cut(s) | 375 |
| MunI | CAATTG | 2 cut(s) | 180, 288 |
| MvnI | CGCG | 1 cut(s) | 47 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 191, 211, 246, 361, 388 |
| NciI | CCSGG | 1 cut(s) | 375 |
| NdeII | GATC | 1 cut(s) | 54 |
| NlaIII | CATG | 4 cut(s) | 61, 235, 253, 325 |
| NmuCI | GTSAC | 3 cut(s) | 13, 160, 310 |
| PkrI | GCNGC | 3 cut(s) | 70, 285, 384 |
| PleI | GAGTC | 1 cut(s) | 261 |
| PpsI | GAGTC | 1 cut(s) | 261 |
| PspEI | GGTNACC | 1 cut(s) | 160 |
| PspPI | GGNCC | 1 cut(s) | 90 |
| RsaI | GTAC | 1 cut(s) | 96 |
| RsaNI | GTAC | 1 cut(s) | 95 |
| SatI | GCNGC | 3 cut(s) | 69, 284, 383 |
| Sau3AI | GATC | 1 cut(s) | 54 |
| Sau96I | GGNCC | 1 cut(s) | 90 |
| SchI | GAGTC | 1 cut(s) | 261 |
| ScrFI | CCNGG | 1 cut(s) | 375 |
| SetI | ASST | 6 cut(s) | 20, 85, 100, 162, 226, 302 |
| SfaNI | GCATC | 5 cut(s) | 192, 201, 270, 342, 357 |
| Sse9I | AATT | 2 cut(s) | 180, 288 |
| SsiI | CCGC | 5 cut(s) | 23, 35, 47, 284, 383 |
| StyD4I | CCNGG | 1 cut(s) | 373 |
| TaiI | ACGT | 1 cut(s) | 20 |
| TasI | AATT | 2 cut(s) | 180, 288 |
| TauI | GCSGC | 2 cut(s) | 286, 385 |
| TscAI | CASTG | 1 cut(s) | 132 |
| TseFI | GTSAC | 3 cut(s) | 13, 160, 310 |
| TseI | GCWGC | 1 cut(s) | 68 |
| Tsp45I | GTSAC | 3 cut(s) | 13, 160, 310 |
| TspDTI | ATGAA | 1 cut(s) | 248 |
| TspRI | CASTG | 1 cut(s) | 132 |