Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0005441

Physical Location & Seq

Genomic Coordinates Forward (+)

4486526 .. 4491159

Gene Structure 4634 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g07670.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2139 bp

ATGGAAAGATCTATAGCAGCCAATCTCAGAAAACAACTAAAAACCAAAAATTACTTTATCCACTCTCACAAGTTTGAAGTTTCACTCCTAGCTGAGGAAACACTCACTCTTCTTCACTCTCAGAGAGTCAGAGTGATGCAGCTCCTCCAAACCCCTCACCACTTCCTCTTCACCTTCCCCAAAACCCTAAACCCCCAACCCAAATGGACCACCACTCCCCATCCCCACCTCTCCTTCAAATCCAAGGCCTTCAGCTCCGACGAGTTCCCCGTCGACGAGACCTTCCTCCAGAACTTCGGCCCCAAAGACAAAGAAACCGAGGACGAGGCCCGCAAGCGCAACTGGGTCGAGCGCGGCTGGGCCCCATGGGAGGAGATTCTCACACCTGAAGCCAACTTCGCCCGCAAATCCCTCAACGAAGGCGAGGAAGTCGCGCTCCAGTCGCCGGAGGCCATCGAGGCGTTTAAAATGCTCCGGCCGAGCTACCGGAAGAAGAAGATGGAGGAGATGGGCCTAACTGAAGACGACTACTACAAGAAACAGTTTGAAATCAAAGGGAATATTCCGGCGCCGTTGGAGACTTCGTGGGCCGGGCCGTTGGTGGTGAGACAGGTGCCACCGAGGGATTGGCCGCCGAGGGATTGGGAGGTGGATAGGGAGGAGCTGGAGTTTATAAGGGGAGCGCATAAGCTGCAGGCGGTGAGAGTGAAGGTGGGTGATTTGGAGAGTGGGGAGAAGAAAGTGGAGAATGATGAGCTGTGTTTGGATAGGTATAAGGTGTTTTTGAAGCAGTATAAGGAGTGGGCCGCCGCGAATAAGGATCGGTTGGAGGAGGAGTCTTATAAGTATGACCAAGATTACCATCCCGGGAGGAGGAAGAGAGGCAAGGACTACAAAGAGGGCATGTATGAACTTCCGTTTTATTACCCCGGACAAATCTGTGAAGGAAAAGTGACATCTATACATCTGTATCAAGGAGCATTTGTGGACATTGGAGGTGTATATGATGGGTGGGTTCCTATAAAAAATAATGACTGGTACTGGATCCGTCATCACATAAAAGTTGGTATGCGCTGCATGGTTGAAGTTCTGGCTAAACGAGATCCTTATCGCTTTCGGTTTCCAATTGAATTGCGGTTTGTCTATCCGAATATAGACCACCTTATCTTTAACAGATTTGACTTTCCACCAATATTTCATCATGATGAAGATACTAATCCAGATGAATTACGGCGTGATTGTGGAAGACCTCCAGTGCCCAGGAAGGATCCAAAAGATAAACCCGTAGAGGAACCTTTATTGTCAAATCACCCTTATGTTGATAAGTTGTGGCAGATACATGTTGCTGAACAGATGATTTTGGATGATGTGGAGGCTAATCCTGACAAATACAAAGACAAAAAACTGTCAGAGTTAACTGATGATGAAGATTTAAATGAAGAAAACAGTATTGAATATACAAAAGCTTATTATAAGAAGACCTTAATACCAAAAGTGATTATGAAAACTAGCGTTAAAGAACTTGACCTGGAGGCTGCCTTTGCTGAGCGTCAGTTACGTAATACACTAAGAAAGGAAACAGAAGAGAGAGGAGAGGAATACAAAGTTACCAAAATGAGGCGCAATATTGAGATGGACGAATATGACTTCTTACATTGGCGTCGATCATTGGAGGAAAGAGAAGCTTTTATCAGAGATATAAGCTGCCGTAAAGCTCTTGGTCTACCACTGGAAGAGCCAGGGAGGTATGTGGAGGACAGCTACTTTGGGAAGGATCAATATGACCCAGACAACCCTCTATACCGGTATGACTACTGGGGGGAACCAAAAAACTCAGAGAAAAGCAAGCAAGAACGGCTGACAGATGCTCACAACAAATCTATTGTTGGAAAGAGTAACATTTGGTATGAAATGTCATATGATGATTGCATCGAACAGCGGATGAAAAGAGAAGCCAAGGGGATAAAACCAAGAGAATATGAGGAGGAAGATACAAACATAGGTGGAGATGATGAAGACGACGACAATGATGACTTTGATTTCAGCTTCTTGAATGAAACCGTTGATATGAACAGCCAGCCCCATGTTAATGGGACAGAATCTCCTGGAATTTCAGATGAGGGCATGTTTGAGGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000229 GO:0005575 GO:0005622 GO:0005623 GO:0005694 GO:0005737 GO:0005829 GO:0009295 GO:0009507 GO:0009508 GO:0009532 GO:0009536 GO:0009570 GO:0042646 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

713

Amino Acids

84.56

Weight (kDa)

5.27

Isoelectric Point (pI)

49.45

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005441)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48500 AT3G48500
fragaria_vesca	FvH4_5g07670 FvH4_5g07670 FvH4_5g07670
malus_domestica	MD14G1162400.v1.1
prunus_persica	Prupe.5G155500_v2.0.a1
pyrus_communis	pycom14g13530
rosa_chinensis	RchiOBHm_Chr1g0380381 RchiOBHm_Chr7g0190801
rosa_laevigata	RLG00000004495 RLG00000004556 RLG00000026308
rosa_multiflora	Rmu_sc0002819.1_g000003 Rmu_sc0003249.1_g000020
rosa_roxburghii	Rroxscaffold_3G00264290 Rroxscaffold_4G00279440
rosa_rugosa	Rorug04G0085500 Rorug06G0507200
rosa_samantha	Rh1CG414500 Rh4AG090600 Rh4BG147500 Rh4CG098900 Rh7AG113800 Rh7BG116400 Rh7CG119100 Rh7DG117700
rosa_wichuraiana	Rw1G038700 Rw7G009930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	674, 843, 1473
AccB1I	GGYRCC	2 cut(s)	568, 613
AccI	GTMKAC	2 cut(s)	273, 1723
AccII	CGCG	3 cut(s)	354, 434, 812
AciI	CCGC	9 cut(s)	331, 354, 403, 632, 698, 807, 810, 1135, 1939
AclWI	GGATC	7 cut(s)	828, 1039, 1052, 1097, 1262, 1275, 1782
AcoI	YGGCCR	2 cut(s)	476, 629
AcsI	RAATTY	1 cut(s)	2109
AcuI	CTGAAG	3 cut(s)	235, 408, 540
AcyI	GRCGYC	2 cut(s)	569, 1660
AfaI	GTAC	1 cut(s)	1040
AfiI	CCNNNNNNNGG	5 cut(s)	94, 370, 445, 873, 1617
AflIII	ACRYGT	1 cut(s)	1339
AgeI	ACCGGT	1 cut(s)	1803
AgsI	TTSAA	8 cut(s)	77, 238, 548, 787, 1085, 1130, 1454, 2053
AjnI	CCWGG	4 cut(s)	1259, 1527, 1738, 2104
Alw26I	GTCTC	3 cut(s)	272, 572, 601
AlwI	GGATC	7 cut(s)	828, 1039, 1052, 1097, 1262, 1275, 1782
Ama87I	CYCGRG	1 cut(s)	866
ApaI	GGGCCC	1 cut(s)	364
ApeKI	GCWGC	6 cut(s)	17, 139, 691, 1074, 1535, 1704
ApoI	RAATTY	1 cut(s)	2109
ArsI	GACNNNNNNTTYG	2 cut(s)	1748, 1780
AsiGI	ACCGGT	1 cut(s)	1803
AspLEI	GCGC	7 cut(s)	339, 354, 436, 571, 685, 1074, 1623
AspS9I	GGNCC	9 cut(s)	207, 299, 328, 360, 361, 511, 588, 593, 804
AsuC2I	CCSGG	4 cut(s)	592, 867, 868, 930
AsuHPI	GGTGA	6 cut(s)	149, 163, 616, 712, 728, 1301
AvaI	CYCGRG	1 cut(s)	866
AvaII	GGWCC	1 cut(s)	207
BaeGI	GKGCMC	2 cut(s)	364, 1260
BaeI	ACNNNNGTAYC	2 cut(s)	953, 986
BamHI	GGATCC	2 cut(s)	1044, 1267
BanI	GGYRCC	2 cut(s)	568, 613
BanII	GRGCYC	1 cut(s)	364
BbsI	GAAGAC	4 cut(s)	528, 1252, 1484, 2022
BbvCI	CCTCAGC	1 cut(s)	93
BbvI	GCAGC	6 cut(s)	29, 151, 678, 1061, 1522, 1691
BccI	CCATC	7 cut(s)	228, 461, 493, 502, 870, 1001, 1627
BceAI	ACGGC	5 cut(s)	556, 580, 1247, 1692, 1871
BcgI	CGANNNNNNTGC	2 cut(s)	328, 362
BciT130I	CCWGG	4 cut(s)	1261, 1529, 1740, 2106
BcnI	CCSGG	4 cut(s)	592, 867, 868, 930
BcoDI	GTCTC	3 cut(s)	272, 572, 601
BfaI	CTAG	2 cut(s)	89, 1509
BfmI	CTRYAG	2 cut(s)	12, 692
BfoI	RGCGCY	1 cut(s)	572
BglI	GCCNNNNNGGC	1 cut(s)	458
BglII	AGATCT	1 cut(s)	8
BlpI	GCTNAGC	1 cut(s)	1545
Bme1390I	CCNGG	8 cut(s)	592, 867, 868, 930, 1261, 1529, 1740, 2106
Bme18I	GGWCC	1 cut(s)	207
BmeT110I	CYCGRG	1 cut(s)	866
BmgT120I	GGNCC	9 cut(s)	207, 299, 328, 360, 361, 511, 588, 593, 804
BmrFI	CCNGG	8 cut(s)	592, 867, 868, 930, 1261, 1529, 1740, 2106
BmrI	ACTGGG	2 cut(s)	352, 1825
BmsI	GCATC	3 cut(s)	126, 1855, 1938
BmuI	ACTGGG	2 cut(s)	352, 1825
BpiI	GAAGAC	4 cut(s)	528, 1252, 1484, 2022
BpmI	CTGGAG	5 cut(s)	272, 422, 686, 1236, 1550
Bpu10I	CCTNAGC	1 cut(s)	93
Bpu1102I	GCTNAGC	1 cut(s)	1545
BpuMI	CCSGG	4 cut(s)	592, 867, 868, 930
BsaAI	YACGTR	1 cut(s)	1559
BsaBI	GATNNNNATC	3 cut(s)	861, 1107, 1215
BsaHI	GRCGYC	2 cut(s)	569, 1660
BsaI	GGTCTC	1 cut(s)	272
BsaWI	WCCGGW	2 cut(s)	486, 1803
Bsc4I	CCNNNNNNNGG	5 cut(s)	94, 370, 445, 873, 1617
Bse118I	RCCGGY	1 cut(s)	1803
Bse1I	ACTGG	7 cut(s)	347, 439, 1040, 1046, 1253, 1734, 1820
Bse8I	GATNNNNATC	3 cut(s)	861, 1107, 1215
BseBI	CCWGG	4 cut(s)	1261, 1529, 1740, 2106
BseGI	GGATG	4 cut(s)	220, 862, 1369, 1947
BseJI	GATNNNNATC	3 cut(s)	861, 1107, 1215
BseLI	CCNNNNNNNGG	5 cut(s)	94, 370, 445, 873, 1617
BseMII	CTCAG	5 cut(s)	40, 84, 134, 1536, 1848
BseNI	ACTGG	7 cut(s)	347, 439, 1040, 1046, 1253, 1734, 1820
BseRI	GAGGAG	9 cut(s)	134, 386, 518, 674, 845, 848, 886, 1605, 1997
BseSI	GKGCMC	2 cut(s)	364, 1260
BseX3I	CGGCCG	1 cut(s)	476
BseXI	GCAGC	6 cut(s)	29, 151, 678, 1061, 1522, 1691
BseYI	CCCAGC	1 cut(s)	357
Bsh1236I	CGCG	3 cut(s)	354, 434, 812
Bsh1285I	CGRYCG	1 cut(s)	479
BshNI	GGYRCC	2 cut(s)	568, 613
BshTI	ACCGGT	1 cut(s)	1803
BsiEI	CGRYCG	1 cut(s)	479
BsiHKCI	CYCGRG	1 cut(s)	866
BsiSI	CCGG	8 cut(s)	446, 475, 487, 566, 591, 867, 930, 1804
BslFI	GGGAC	1 cut(s)	2107
BslI	CCNNNNNNNGG	5 cut(s)	94, 370, 445, 873, 1617
BsmAI	GTCTC	3 cut(s)	272, 572, 601
BsmFI	GGGAC	1 cut(s)	2107
Bso31I	GGTCTC	1 cut(s)	272
BsoBI	CYCGRG	1 cut(s)	866
Bsp120I	GGGCCC	1 cut(s)	360
Bsp1286I	GDGCHC	2 cut(s)	364, 1260
Bsp143I	GATC	7 cut(s)	8, 820, 1044, 1102, 1267, 1664, 1774
Bsp1720I	GCTNAGC	1 cut(s)	1545
Bsp19I	CCATGG	1 cut(s)	365
BspACI	CCGC	9 cut(s)	331, 354, 403, 632, 698, 807, 810, 1135, 1939
BspCNI	CTCAG	5 cut(s)	39, 85, 133, 1537, 1847
BspFNI	CGCG	3 cut(s)	354, 434, 812
BspHI	TCATGA	1 cut(s)	1201
BspMAI	CTGCAG	1 cut(s)	696
BspPI	GGATC	7 cut(s)	828, 1039, 1052, 1097, 1262, 1275, 1782
BspQI	GCTCTTC	1 cut(s)	1728
BspT107I	GGYRCC	2 cut(s)	568, 613
BspTNI	GGTCTC	1 cut(s)	272
BsrFI	RCCGGY	1 cut(s)	1803
BsrI	ACTGG	7 cut(s)	347, 439, 1040, 1046, 1253, 1734, 1820
BssAI	RCCGGY	1 cut(s)	1803
BssMI	GATC	7 cut(s)	8, 820, 1044, 1102, 1267, 1664, 1774
BssNI	GRCGYC	2 cut(s)	569, 1660
BssT1I	CCWWGG	3 cut(s)	243, 365, 1956
Bst2UI	CCWGG	4 cut(s)	1261, 1529, 1740, 2106
Bst4CI	ACNGT	4 cut(s)	543, 1407, 1448, 2062
Bst6I	CTCTTC	5 cut(s)	114, 173, 872, 1578, 1728
BstACI	GRCGYC	2 cut(s)	569, 1660
BstAPI	GCANNNNNTGC	1 cut(s)	691
BstBAI	YACGTR	1 cut(s)	1559
BstC8I	GCNNGC	6 cut(s)	331, 335, 403, 696, 1847, 2078
BstDEI	CTNAG	6 cut(s)	26, 93, 120, 1545, 1568, 1834
BstDSI	CCRYGG	1 cut(s)	365
BstENI	CCTNNNNNAGG	1 cut(s)	92
BstF5I	GGATG	4 cut(s)	220, 862, 1369, 1947
BstFNI	CGCG	3 cut(s)	354, 434, 812
BstH2I	RGCGCY	1 cut(s)	572
BstHHI	GCGC	7 cut(s)	339, 354, 436, 571, 685, 1074, 1623
BstKTI	GATC	7 cut(s)	11, 823, 1047, 1105, 1270, 1667, 1777
BstMAI	GTCTC	3 cut(s)	272, 572, 601
BstMBI	GATC	7 cut(s)	8, 820, 1044, 1102, 1267, 1664, 1774
BstMCI	CGRYCG	1 cut(s)	479
BstMWI	GCNNNNNNNGC	6 cut(s)	398, 442, 458, 691, 1541, 1855
BstNI	CCWGG	4 cut(s)	1261, 1529, 1740, 2106
BstNSI	RCATGY	3 cut(s)	907, 1343, 2128
BstSCI	CCNGG	8 cut(s)	590, 865, 866, 928, 1259, 1527, 1738, 2104
BstSFI	CTRYAG	2 cut(s)	12, 692
BstSLI	GKGCMC	2 cut(s)	364, 1260
BstSNI	TACGTA	1 cut(s)	1559
BstUI	CGCG	3 cut(s)	354, 434, 812
BstV1I	GCAGC	6 cut(s)	29, 151, 678, 1061, 1522, 1691
BstV2I	GAAGAC	4 cut(s)	528, 1252, 1484, 2022
BstX2I	RGATCY	4 cut(s)	8, 1044, 1102, 1267
BstXI	CCANNNNNNTGG	1 cut(s)	2090
BstYI	RGATCY	4 cut(s)	8, 1044, 1102, 1267
BstZI	CGGCCG	1 cut(s)	476
BtgI	CCRYGG	1 cut(s)	365
BtsCI	GGATG	4 cut(s)	220, 862, 1369, 1947
BtsIMutI	CAGTG	2 cut(s)	1260, 1727
Cac8I	GCNNGC	6 cut(s)	331, 335, 403, 696, 1847, 2078
CciI	TCATGA	1 cut(s)	1201
CfoI	GCGC	7 cut(s)	339, 354, 436, 571, 685, 1074, 1623
Cfr10I	RCCGGY	1 cut(s)	1803
Cfr13I	GGNCC	9 cut(s)	207, 299, 328, 360, 361, 511, 588, 593, 804
Cfr9I	CCCGGG	1 cut(s)	866
CseI	GACGC	2 cut(s)	1538, 1649
Csp6I	GTAC	1 cut(s)	1039
CspAI	ACCGGT	1 cut(s)	1803
CviAII	CATG	7 cut(s)	366, 904, 1078, 1202, 1340, 2084, 2125
CviQI	GTAC	1 cut(s)	1039
DdeI	CTNAG	6 cut(s)	26, 93, 120, 1545, 1568, 1834
DinI	GGCGCC	1 cut(s)	570
DpnI	GATC	7 cut(s)	10, 822, 1046, 1104, 1269, 1666, 1776
DpnII	GATC	7 cut(s)	8, 820, 1044, 1102, 1267, 1664, 1774
DraI	TTTAAA	2 cut(s)	466, 1434
EaeI	YGGCCR	2 cut(s)	476, 629
EagI	CGGCCG	1 cut(s)	476
Eam1104I	CTCTTC	5 cut(s)	114, 173, 872, 1578, 1728
EarI	CTCTTC	5 cut(s)	114, 173, 872, 1578, 1728
EclXI	CGGCCG	1 cut(s)	476
Eco105I	TACGTA	1 cut(s)	1559
Eco130I	CCWWGG	3 cut(s)	243, 365, 1956
Eco147I	AGGCCT	1 cut(s)	248
Eco24I	GRGCYC	1 cut(s)	364
Eco31I	GGTCTC	1 cut(s)	272
Eco47I	GGWCC	1 cut(s)	207
Eco52I	CGGCCG	1 cut(s)	476
Eco57I	CTGAAG	3 cut(s)	235, 408, 540
Eco88I	CYCGRG	1 cut(s)	866
EcoNI	CCTNNNNNAGG	1 cut(s)	92
EcoO109I	RGGNCCY	1 cut(s)	361
EcoRII	CCWGG	4 cut(s)	1259, 1527, 1738, 2104
EcoT14I	CCWWGG	3 cut(s)	243, 365, 1956
EcoT38I	GRGCYC	1 cut(s)	364
EgeI	GGCGCC	1 cut(s)	570
EheI	GGCGCC	1 cut(s)	570
ErhI	CCWWGG	3 cut(s)	243, 365, 1956
FaeI	CATG	7 cut(s)	369, 907, 1081, 1205, 1343, 2087, 2128
FalI	AAGNNNNNCTT	4 cut(s)	1466, 1498, 1669, 1701
FaqI	GGGAC	1 cut(s)	2107
FatI	CATG	7 cut(s)	365, 903, 1077, 1201, 1339, 2083, 2124
FauI	CCCGC	2 cut(s)	338, 410
FauNDI	CATATG	1 cut(s)	1918
FblI	GTMKAC	2 cut(s)	273, 1723
FokI	GGATG	4 cut(s)	207, 849, 1376, 1954
FriOI	GRGCYC	1 cut(s)	364
FspBI	CTAG	2 cut(s)	89, 1509
GlaI	GCGC	7 cut(s)	338, 353, 435, 570, 684, 1073, 1622
GsaI	CCCAGC	1 cut(s)	361
GsuI	CTGGAG	5 cut(s)	272, 422, 686, 1236, 1550
HaeII	RGCGCY	1 cut(s)	572
HapII	CCGG	8 cut(s)	446, 475, 487, 566, 591, 867, 930, 1804
HgaI	GACGC	2 cut(s)	1538, 1649
HhaI	GCGC	7 cut(s)	339, 354, 436, 571, 685, 1074, 1623
Hin1I	GRCGYC	2 cut(s)	569, 1660
Hin1II	CATG	7 cut(s)	369, 907, 1081, 1205, 1343, 2087, 2128
Hin6I	GCGC	7 cut(s)	337, 352, 434, 569, 683, 1072, 1621
HinP1I	GCGC	7 cut(s)	337, 352, 434, 569, 683, 1072, 1621
HincII	GTYRAC	2 cut(s)	274, 1416
HindII	GTYRAC	2 cut(s)	274, 1416
HindIII	AAGCTT	2 cut(s)	1464, 1683
HinfI	GANTC	4 cut(s)	126, 376, 836, 2099
HpaI	GTTAAC	1 cut(s)	1416
HpaII	CCGG	8 cut(s)	446, 475, 487, 566, 591, 867, 930, 1804
HphI	GGTGA	6 cut(s)	149, 163, 616, 712, 728, 1301
Hpy166II	GTNNAC	4 cut(s)	274, 988, 1416, 1724
Hpy188I	TCNGA	9 cut(s)	29, 123, 131, 259, 1149, 1411, 1694, 1837, 2116
Hpy188III	TCNNGA	5 cut(s)	289, 1202, 1220, 1382, 2050
Hpy8I	GTNNAC	4 cut(s)	274, 988, 1416, 1724
Hpy99I	CGWCG	5 cut(s)	263, 275, 278, 1665, 2024
HpyAV	CCTTC	9 cut(s)	184, 244, 259, 292, 413, 703, 938, 1258, 1765
HpyCH4III	ACNGT	4 cut(s)	543, 1407, 1448, 2062
HpyCH4IV	ACGT	1 cut(s)	1558
HpyCH4V	TGCA	4 cut(s)	139, 694, 1077, 1929
HpyF10VI	GCNNNNNNNGC	6 cut(s)	398, 442, 458, 691, 1541, 1855
HpyF3I	CTNAG	6 cut(s)	26, 93, 120, 1545, 1568, 1834
HpySE526I	ACGT	1 cut(s)	1558
Hsp92I	GRCGYC	2 cut(s)	569, 1660
Hsp92II	CATG	7 cut(s)	369, 907, 1081, 1205, 1343, 2087, 2128
HspAI	GCGC	7 cut(s)	337, 352, 434, 569, 683, 1072, 1621
KasI	GGCGCC	1 cut(s)	568
KspAI	GTTAAC	1 cut(s)	1416
Kzo9I	GATC	7 cut(s)	8, 820, 1044, 1102, 1267, 1664, 1774
LguI	GCTCTTC	1 cut(s)	1728
LmnI	GCTCC	7 cut(s)	147, 260, 441, 477, 661, 680, 977
Lsp1109I	GCAGC	6 cut(s)	29, 151, 678, 1061, 1522, 1691
LweI	GCATC	3 cut(s)	126, 1855, 1938
MaeI	CTAG	2 cut(s)	89, 1509
MaeII	ACGT	1 cut(s)	1558
MaeIII	GTNAC	4 cut(s)	952, 1554, 1606, 1895
MalI	GATC	7 cut(s)	10, 822, 1046, 1104, 1269, 1666, 1776
MboI	GATC	7 cut(s)	8, 820, 1044, 1102, 1267, 1664, 1774
MfeI	CAATTG	1 cut(s)	1125
MflI	RGATCY	4 cut(s)	8, 1044, 1102, 1267
MhlI	GDGCHC	2 cut(s)	364, 1260
MluCI	AATT	5 cut(s)	49, 1125, 1130, 1226, 2109
Mly113I	GGCGCC	1 cut(s)	569
MlyI	GAGTC	2 cut(s)	135, 845
MmeI	TCCRAC	4 cut(s)	282, 555, 807, 1867
MseI	TTAA	8 cut(s)	465, 1170, 1415, 1433, 1484, 1515, 2088, 2137
MslI	CAYNNNNRTG	3 cut(s)	1203, 1314, 2088
MspA1I	CMGCKG	1 cut(s)	1939
MspI	CCGG	8 cut(s)	446, 475, 487, 566, 591, 867, 930, 1804
MspR9I	CCNGG	8 cut(s)	592, 867, 868, 930, 1261, 1529, 1740, 2106
MunI	CAATTG	1 cut(s)	1125
MvaI	CCWGG	4 cut(s)	1261, 1529, 1740, 2106
MvnI	CGCG	3 cut(s)	354, 434, 812
MwoI	GCNNNNNNNGC	6 cut(s)	398, 442, 458, 691, 1541, 1855
NarI	GGCGCC	1 cut(s)	569
NciI	CCSGG	4 cut(s)	592, 867, 868, 930
NcoI	CCATGG	1 cut(s)	365
NdeI	CATATG	1 cut(s)	1918
NdeII	GATC	7 cut(s)	8, 820, 1044, 1102, 1267, 1664, 1774
NlaIII	CATG	7 cut(s)	369, 907, 1081, 1205, 1343, 2087, 2128
NmeAIII	GCCGAG	2 cut(s)	504, 660
NmuCI	GTSAC	1 cut(s)	952
NspI	RCATGY	3 cut(s)	907, 1343, 2128
PagI	TCATGA	1 cut(s)	1201
PceI	AGGCCT	1 cut(s)	248
PciI	ACATGT	1 cut(s)	1339
PciSI	GCTCTTC	1 cut(s)	1728
PcsI	WCGNNNNNNNCGW	1 cut(s)	267
PfeI	GAWTC	2 cut(s)	376, 2099
PfoI	TCCNGGA	1 cut(s)	2104
PinAI	ACCGGT	1 cut(s)	1803
PleI	GAGTC	2 cut(s)	134, 844
PluTI	GGCGCC	1 cut(s)	572
PpsI	GAGTC	2 cut(s)	134, 844
Ppu21I	YACGTR	1 cut(s)	1559
PscI	ACATGT	1 cut(s)	1339
PsiI	TTATAA	3 cut(s)	674, 843, 1473
Psp6I	CCWGG	4 cut(s)	1259, 1527, 1738, 2104
PspFI	CCCAGC	1 cut(s)	357
PspGI	CCWGG	4 cut(s)	1259, 1527, 1738, 2104
PspOMI	GGGCCC	1 cut(s)	360
PspPI	GGNCC	9 cut(s)	207, 299, 328, 360, 361, 511, 588, 593, 804
PstI	CTGCAG	1 cut(s)	696
PsuI	RGATCY	4 cut(s)	8, 1044, 1102, 1267
RsaI	GTAC	1 cut(s)	1040
RsaNI	GTAC	1 cut(s)	1039
RseI	CAYNNNNRTG	3 cut(s)	1203, 1314, 2088
SalI	GTCGAC	1 cut(s)	272
SapI	GCTCTTC	1 cut(s)	1728
SaqAI	TTAA	8 cut(s)	465, 1170, 1415, 1433, 1484, 1515, 2088, 2137
Sau3AI	GATC	7 cut(s)	8, 820, 1044, 1102, 1267, 1664, 1774
Sau96I	GGNCC	9 cut(s)	207, 299, 328, 360, 361, 511, 588, 593, 804
SchI	GAGTC	2 cut(s)	135, 845
ScrFI	CCNGG	8 cut(s)	592, 867, 868, 930, 1261, 1529, 1740, 2106
SduI	GDGCHC	2 cut(s)	364, 1260
SfaNI	GCATC	3 cut(s)	126, 1855, 1938
SfcI	CTRYAG	2 cut(s)	12, 692
SfoI	GGCGCC	1 cut(s)	570
SgrDI	CGTCGACG	1 cut(s)	272
SinI	GGWCC	1 cut(s)	207
SmaI	CCCGGG	1 cut(s)	868
SmiI	ATTTAAAT	1 cut(s)	1434
SmiMI	CAYNNNNRTG	3 cut(s)	1203, 1314, 2088
SnaBI	TACGTA	1 cut(s)	1559
Sse9I	AATT	5 cut(s)	49, 1125, 1130, 1226, 2109
SseBI	AGGCCT	1 cut(s)	248
SsiI	CCGC	9 cut(s)	331, 354, 403, 632, 698, 807, 810, 1135, 1939
SspDI	GGCGCC	1 cut(s)	568
SspI	AATATT	3 cut(s)	562, 1194, 1627
SspMI	CTAG	2 cut(s)	89, 1509
StuI	AGGCCT	1 cut(s)	248
StyD4I	CCNGG	8 cut(s)	590, 865, 866, 928, 1259, 1527, 1738, 2104
StyI	CCWWGG	3 cut(s)	243, 365, 1956
SwaI	ATTTAAAT	1 cut(s)	1434
TaaI	ACNGT	4 cut(s)	543, 1407, 1448, 2062
TaiI	ACGT	1 cut(s)	1561
TaqI	TCGA	5 cut(s)	273, 348, 456, 1663, 1932
TasI	AATT	5 cut(s)	49, 1125, 1130, 1226, 2109
TauI	GCSGC	4 cut(s)	357, 634, 809, 812
TfiI	GAWTC	2 cut(s)	376, 2099
Tru1I	TTAA	8 cut(s)	465, 1170, 1415, 1433, 1484, 1515, 2088, 2137
Tru9I	TTAA	8 cut(s)	465, 1170, 1415, 1433, 1484, 1515, 2088, 2137
TscAI	CASTG	2 cut(s)	1260, 1734
TseFI	GTSAC	1 cut(s)	952
TseI	GCWGC	6 cut(s)	17, 139, 691, 1074, 1535, 1704
Tsp45I	GTSAC	1 cut(s)	952
TspGWI	ACGGA	2 cut(s)	906, 1037
TspMI	CCCGGG	1 cut(s)	866
TspRI	CASTG	2 cut(s)	1260, 1734
VpaK11BI	GGWCC	1 cut(s)	207
XagI	CCTNNNNNAGG	1 cut(s)	92
XapI	RAATTY	1 cut(s)	2109
XceI	RCATGY	3 cut(s)	907, 1343, 2128
XcmI	CCANNNNNNNNNTGG	1 cut(s)	624
XmaI	CCCGGG	1 cut(s)	866
XmiI	GTMKAC	2 cut(s)	273, 1723
XspI	CTAG	2 cut(s)	89, 1509

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.