Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7C

Orthogroup ID

OG0005441

Physical Location & Seq

Genomic Coordinates Reverse (-)

9113748 .. 9118261

Gene Structure 4514 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7CG119100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1620 bp

ATGCAACTCCTCCAAACCCCTCACCAATTCCTCTTCACCTTCCCTCCACCTAAAACCCTAAACCCTTCTCCCCACTCCAAACCCCAACCTCCCAAATGGACCATTCCTTATCTCTTCCCCCTCACCCATTCCCCTCCCACCAACCCCTTCAAACCCAAAGCCTTCAGCTCCGACGAGTTCCCCGTCGACGAGACCTTCCTCCAGAACTTCGGCCCAAAGGACAAGGAAACCGAAGACGAGGCCCGCAAGCGCAACTGGGTCGAGCGCGGCTGGGCCCCCTGGGAGGAGGTCCTCACCCCCGAGGCCGATTTCGCGCGCAAATCCCTCAACGAAGGCGAAGAGGTCGCCCTCCAGTCCCCCGAGGCCATTGAGGCCTTCAAGATGCTCCGGCCGAGTTACCGGAAGAAGAAGATGGAGGAGATGGGGCTGACGGAGGACGACTACTACCGGAAACAGTTCGAGATTAAGGGGAATATTCCGGAGCCGTTGGAGACGGTCTGGGCCGGCCCGCTGGTGGTGAGACAGGTGCCGCCCAGGGATTGGCCGCCCAGGGATTGGGAGGTGGATAAGGAGGAGCTGGAGTATATAAGAGGAGCTCATAAGTTGCAAGCAGTGAGGGTAAAGTTGAGTGATTTGGAGAGTGGGGTTAAAGTGGAAAATGATGAGCTGTGTTTGGATAGGTATAAGGTGTTTTTGAAGCAGTATAAGGAGTGGGTCGCCGCGAATAAGGATCGATTGGAGGAGGAGTCTTATAAGTATGACCAAGATTACCATCCGGGAAGGAGGAAGAGAGGCAAGGACTACAAAGAGGGCATGTATGAACTTCCGTTTTATTACCCCGGACAAATCTGTGAAGGAAAAGTGACATCTATACATCTGTATCAAGGAGCATTTGTGGACATCGGAGGTGTATATGATGGGTGGGTTCCTATAAAAAATAACGACTGGTACTGGATCCGCCATCACATAAAAGTTGGTATGCGTGTCATGGTTGAAATTCTGGCAAAACGAGATCCTTATCGCTTTCGGTTTCCAATTGAATTGCGTTTTGTCTATCCGAATATAGACCACCTTATCTTTAACAGGTTTGACTTTCCACCAATATTTCATCATGATGAAGATACTAATCCAGATGAATTACGGCGTGATTGTGGAAGACCTCCTGTGCCCAGGAAGGATCCAAAAGATAAGCCCGTAGAGGAACCTTTATTGTCAAATCACCCTTATGTTGATAAGTTGTGGCAGATACATGTTGCTGAACAGATGATTTTGGATGATGTGGAGGCTAATCCTGGGAAATATAAAGACAAAAAACTATCAGAGTTAACTGATACTGAAGATTTGAATGAAGAAAATAGTATTGAATATTCAAAAGCTTATTATAAGAAAGCCTTAGTACCAAAAGTGATTCTGAAAACAAGCGTTAAAGAACTTGACCTGGAGGCTGCCTTTGCTGAGCGTCAGCTACGTAACACACTAAGAAGGGAGACAGAAGAGAGAGGAGAGGAATACAAAGTTACCAAAATGAGGCGCAATGTTGAGATGGACGAGTATGACTTCTTACATTGGCGTCGATCATTGGAGGAAAGAGAAGCTTTGATCAGAGATATAAGCTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000229 GO:0005575 GO:0005622 GO:0005623 GO:0005694 GO:0005737 GO:0005829 GO:0009295 GO:0009507 GO:0009508 GO:0009532 GO:0009536 GO:0009570 GO:0042646 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

539

Amino Acids

64.22

Weight (kDa)

5.71

Isoelectric Point (pI)

51.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005441)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48500 AT3G48500
fragaria_vesca	FvH4_5g07670 FvH4_5g07670 FvH4_5g07670
malus_domestica	MD14G1162400.v1.1
prunus_persica	Prupe.5G155500_v2.0.a1
pyrus_communis	pycom14g13530
rosa_chinensis	RchiOBHm_Chr1g0380381 RchiOBHm_Chr7g0190801
rosa_laevigata	RLG00000004495 RLG00000004556 RLG00000026308
rosa_multiflora	Rmu_sc0002819.1_g000003 Rmu_sc0003249.1_g000020
rosa_roxburghii	Rroxscaffold_3G00264290 Rroxscaffold_4G00279440
rosa_rugosa	Rorug04G0085500 Rorug06G0507200
rosa_samantha	Rh1CG414500 Rh4AG090600 Rh4BG147500 Rh4CG098900 Rh7AG113800 Rh7BG116400 Rh7CG119100 Rh7DG117700
rosa_wichuraiana	Rw1G038700 Rw7G009930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	753, 1383
AccB1I	GGYRCC	1 cut(s)	526
AccB7I	CCANNNNNTGG	2 cut(s)	540, 555
AccI	GTMKAC	1 cut(s)	186
AccII	CGCG	4 cut(s)	267, 314, 316, 722
AccIII	TCCGGA	1 cut(s)	478
AciI	CCGC	7 cut(s)	244, 267, 509, 530, 545, 720, 958
AclWI	GGATC	6 cut(s)	738, 949, 962, 1007, 1172, 1185
AcoI	YGGCCR	2 cut(s)	389, 542
AcsI	RAATTY	1 cut(s)	996
AcuI	CTGAAG	2 cut(s)	148, 1356
AcyI	GRCGYC	1 cut(s)	1570
AfaI	GTAC	2 cut(s)	950, 1398
AfiI	CCNNNNNNNGG	5 cut(s)	283, 514, 540, 555, 1527
AflIII	ACRYGT	1 cut(s)	1249
AgsI	TTSAA	8 cut(s)	151, 379, 697, 995, 1040, 1345, 1364, 1371
AjnI	CCWGG	6 cut(s)	278, 533, 548, 1169, 1291, 1437
AluBI	AGCT	8 cut(s)	168, 577, 596, 667, 1376, 1465, 1595, 1614
AluI	AGCT	8 cut(s)	168, 577, 596, 667, 1376, 1465, 1595, 1614
Alw21I	GWGCWC	1 cut(s)	598
Alw26I	GTCTC	4 cut(s)	185, 485, 514, 1481
AlwI	GGATC	6 cut(s)	738, 949, 962, 1007, 1172, 1185
Ama87I	CYCGRG	2 cut(s)	299, 359
Aor13HI	TCCGGA	1 cut(s)	478
ApaI	GGGCCC	1 cut(s)	277
ApeKI	GCWGC	1 cut(s)	1445
ApoI	RAATTY	1 cut(s)	996
Asp700I	GAANNNNTTC	1 cut(s)	455
AspLEI	GCGC	5 cut(s)	252, 267, 316, 318, 1533
AspS9I	GGNCC	8 cut(s)	99, 212, 241, 273, 274, 289, 501, 506
AsuC2I	CCSGG	2 cut(s)	777, 840
AsuHPI	GGTGA	6 cut(s)	14, 28, 115, 286, 529, 1211
AvaI	CYCGRG	2 cut(s)	299, 359
AvaII	GGWCC	2 cut(s)	99, 289
BaeGI	GKGCMC	2 cut(s)	277, 1170
BaeI	ACNNNNGTAYC	2 cut(s)	863, 896
BamHI	GGATCC	2 cut(s)	954, 1177
BanI	GGYRCC	1 cut(s)	526
BanII	GRGCYC	2 cut(s)	277, 598
BbsI	GAAGAC	2 cut(s)	240, 1162
Bbv12I	GWGCWC	1 cut(s)	598
BbvI	GCAGC	1 cut(s)	1432
BccI	CCATC	6 cut(s)	406, 415, 780, 911, 969, 1537
BceAI	ACGGC	2 cut(s)	469, 1157
BcgI	CGANNNNNNTGC	2 cut(s)	241, 275
BciT130I	CCWGG	6 cut(s)	280, 535, 550, 1171, 1293, 1439
BclI	TGATCA	1 cut(s)	1599
BcnI	CCSGG	2 cut(s)	777, 840
BcoDI	GTCTC	4 cut(s)	185, 485, 514, 1481
BglI	GCCNNNNNGGC	1 cut(s)	371
BisI	GCNGC	5 cut(s)	268, 530, 545, 720, 1446
BlpI	GCTNAGC	1 cut(s)	1455
BlsI	GCNGC	5 cut(s)	269, 531, 546, 721, 1447
Bme1390I	CCNGG	8 cut(s)	280, 535, 550, 777, 840, 1171, 1293, 1439
Bme18I	GGWCC	2 cut(s)	99, 289
BmeT110I	CYCGRG	2 cut(s)	299, 359
BmgT120I	GGNCC	8 cut(s)	99, 212, 241, 273, 274, 289, 501, 506
BmiI	GGNNCC	8 cut(s)	275, 276, 483, 528, 927, 956, 1179, 1203
BmrFI	CCNGG	8 cut(s)	280, 535, 550, 777, 840, 1171, 1293, 1439
BmrI	ACTGGG	1 cut(s)	265
BmsI	GCATC	1 cut(s)	372
BmuI	ACTGGG	1 cut(s)	265
BpiI	GAAGAC	2 cut(s)	240, 1162
BpmI	CTGGAG	4 cut(s)	185, 335, 599, 1460
Bpu1102I	GCTNAGC	1 cut(s)	1455
BpuMI	CCSGG	2 cut(s)	777, 840
Bsa29I	ATCGAT	1 cut(s)	733
BsaAI	YACGTR	1 cut(s)	1469
BsaBI	GATNNNNATC	3 cut(s)	771, 1017, 1125
BsaHI	GRCGYC	1 cut(s)	1570
BsaI	GGTCTC	1 cut(s)	185
BsaWI	WCCGGW	3 cut(s)	399, 447, 478
BsaXI	ACNNNNNCTCC	8 cut(s)	28, 58, 566, 596, 731, 761, 879, 909
Bsc4I	CCNNNNNNNGG	5 cut(s)	283, 514, 540, 555, 1527
Bse118I	RCCGGY	1 cut(s)	503
Bse1I	ACTGG	4 cut(s)	260, 352, 950, 956
Bse3DI	GCAATG	1 cut(s)	1540
Bse8I	GATNNNNATC	3 cut(s)	771, 1017, 1125
BseAI	TCCGGA	1 cut(s)	478
BseBI	CCWGG	6 cut(s)	280, 535, 550, 1171, 1293, 1439
BseCI	ATCGAT	1 cut(s)	733
BseGI	GGATG	2 cut(s)	772, 1279
BseJI	GATNNNNATC	3 cut(s)	771, 1017, 1125
BseLI	CCNNNNNNNGG	5 cut(s)	283, 514, 540, 555, 1527
BseMI	GCAATG	1 cut(s)	1540
BseMII	CTCAG	1 cut(s)	1446
BseNI	ACTGG	4 cut(s)	260, 352, 950, 956
BsePI	GCGCGC	1 cut(s)	314
BseRI	GAGGAG	7 cut(s)	299, 431, 587, 606, 755, 758, 1515
BseSI	GKGCMC	2 cut(s)	277, 1170
BseX3I	CGGCCG	1 cut(s)	389
BseXI	GCAGC	1 cut(s)	1432
BseYI	CCCAGC	1 cut(s)	270
Bsh1236I	CGCG	4 cut(s)	267, 314, 316, 722
Bsh1285I	CGRYCG	1 cut(s)	392
BshNI	GGYRCC	1 cut(s)	526
BshVI	ATCGAT	1 cut(s)	733
BsiEI	CGRYCG	1 cut(s)	392
BsiHKAI	GWGCWC	1 cut(s)	598
BsiHKCI	CYCGRG	2 cut(s)	299, 359
BsiSI	CCGG	7 cut(s)	388, 400, 448, 479, 504, 776, 840
BslFI	GGGAC	1 cut(s)	340
BslI	CCNNNNNNNGG	5 cut(s)	283, 514, 540, 555, 1527
BsmAI	GTCTC	4 cut(s)	185, 485, 514, 1481
BsmBI	CGTCTC	1 cut(s)	485
BsmFI	GGGAC	1 cut(s)	340
Bso31I	GGTCTC	1 cut(s)	185
BsoBI	CYCGRG	2 cut(s)	299, 359
Bsp120I	GGGCCC	1 cut(s)	273
Bsp1286I	GDGCHC	3 cut(s)	277, 598, 1170
Bsp13I	TCCGGA	1 cut(s)	478
Bsp143I	GATC	6 cut(s)	730, 954, 1012, 1177, 1574, 1599
Bsp1720I	GCTNAGC	1 cut(s)	1455
BspACI	CCGC	7 cut(s)	244, 267, 509, 530, 545, 720, 958
BspCNI	CTCAG	1 cut(s)	1447
BspDI	ATCGAT	1 cut(s)	733
BspEI	TCCGGA	1 cut(s)	478
BspFNI	CGCG	4 cut(s)	267, 314, 316, 722
BspHI	TCATGA	1 cut(s)	1111
BspLI	GGNNCC	8 cut(s)	275, 276, 483, 528, 927, 956, 1179, 1203
BspPI	GGATC	6 cut(s)	738, 949, 962, 1007, 1172, 1185
BspT107I	GGYRCC	1 cut(s)	526
BspTNI	GGTCTC	1 cut(s)	185
BsrDI	GCAATG	1 cut(s)	1540
BsrFI	RCCGGY	1 cut(s)	503
BsrI	ACTGG	4 cut(s)	260, 352, 950, 956
BssAI	RCCGGY	1 cut(s)	503
BssHII	GCGCGC	1 cut(s)	314
BssMI	GATC	6 cut(s)	730, 954, 1012, 1177, 1574, 1599
BssNI	GRCGYC	1 cut(s)	1570
Bst2UI	CCWGG	6 cut(s)	280, 535, 550, 1171, 1293, 1439
Bst4CI	ACNGT	2 cut(s)	456, 496
Bst6I	CTCTTC	5 cut(s)	38, 119, 333, 782, 1488
BstACI	GRCGYC	1 cut(s)	1570
BstBAI	YACGTR	1 cut(s)	1469
BstC8I	GCNNGC	6 cut(s)	244, 248, 316, 505, 509, 609
BstDEI	CTNAG	3 cut(s)	1393, 1455, 1478
BstF5I	GGATG	2 cut(s)	772, 1279
BstFNI	CGCG	4 cut(s)	267, 314, 316, 722
BstHHI	GCGC	5 cut(s)	252, 267, 316, 318, 1533
BstKTI	GATC	6 cut(s)	733, 957, 1015, 1180, 1577, 1602
BstMAI	GTCTC	4 cut(s)	185, 485, 514, 1481
BstMBI	GATC	6 cut(s)	730, 954, 1012, 1177, 1574, 1599
BstMCI	CGRYCG	1 cut(s)	392
BstMWI	GCNNNNNNNGC	3 cut(s)	311, 371, 1451
BstNI	CCWGG	6 cut(s)	280, 535, 550, 1171, 1293, 1439
BstNSI	RCATGY	2 cut(s)	817, 1253
BstSCI	CCNGG	8 cut(s)	278, 533, 548, 775, 838, 1169, 1291, 1437
BstSLI	GKGCMC	2 cut(s)	277, 1170
BstSNI	TACGTA	1 cut(s)	1469
BstUI	CGCG	4 cut(s)	267, 314, 316, 722
BstV1I	GCAGC	1 cut(s)	1432
BstV2I	GAAGAC	2 cut(s)	240, 1162
BstX2I	RGATCY	3 cut(s)	954, 1012, 1177
BstYI	RGATCY	3 cut(s)	954, 1012, 1177
BstZI	CGGCCG	1 cut(s)	389
Bsu15I	ATCGAT	1 cut(s)	733
BsuTUI	ATCGAT	1 cut(s)	733
BtsCI	GGATG	2 cut(s)	772, 1279
BtsI	GCAGTG	1 cut(s)	618
BtsIMutI	CAGTG	1 cut(s)	618
Cac8I	GCNNGC	6 cut(s)	244, 248, 316, 505, 509, 609
CciI	TCATGA	1 cut(s)	1111
CfoI	GCGC	5 cut(s)	252, 267, 316, 318, 1533
Cfr10I	RCCGGY	1 cut(s)	503
Cfr13I	GGNCC	8 cut(s)	99, 212, 241, 273, 274, 289, 501, 506
ClaI	ATCGAT	1 cut(s)	733
CseI	GACGC	2 cut(s)	1448, 1559
Csp6I	GTAC	2 cut(s)	949, 1397
CviAII	CATG	4 cut(s)	814, 988, 1112, 1250
CviQI	GTAC	2 cut(s)	949, 1397
DdeI	CTNAG	3 cut(s)	1393, 1455, 1478
DpnI	GATC	6 cut(s)	732, 956, 1014, 1179, 1576, 1601
DpnII	GATC	6 cut(s)	730, 954, 1012, 1177, 1574, 1599
EaeI	YGGCCR	2 cut(s)	389, 542
EagI	CGGCCG	1 cut(s)	389
Eam1104I	CTCTTC	5 cut(s)	38, 119, 333, 782, 1488
EarI	CTCTTC	5 cut(s)	38, 119, 333, 782, 1488
EciI	GGCGGA	1 cut(s)	947
Ecl136II	GAGCTC	1 cut(s)	596
EclXI	CGGCCG	1 cut(s)	389
Eco105I	TACGTA	1 cut(s)	1469
Eco147I	AGGCCT	1 cut(s)	374
Eco24I	GRGCYC	2 cut(s)	277, 598
Eco31I	GGTCTC	1 cut(s)	185
Eco47I	GGWCC	2 cut(s)	99, 289
Eco52I	CGGCCG	1 cut(s)	389
Eco53kI	GAGCTC	1 cut(s)	596
Eco57I	CTGAAG	2 cut(s)	148, 1356
Eco88I	CYCGRG	2 cut(s)	299, 359
EcoICRI	GAGCTC	1 cut(s)	596
EcoO109I	RGGNCCY	2 cut(s)	274, 289
EcoRII	CCWGG	6 cut(s)	278, 533, 548, 1169, 1291, 1437
EcoT38I	GRGCYC	2 cut(s)	277, 598
Esp3I	CGTCTC	1 cut(s)	485
FaeI	CATG	4 cut(s)	817, 991, 1115, 1253
FalI	AAGNNNNNCTT	4 cut(s)	1376, 1408, 1579, 1611
FaqI	GGGAC	1 cut(s)	340
FatI	CATG	4 cut(s)	813, 987, 1111, 1249
FauI	CCCGC	2 cut(s)	251, 516
FbaI	TGATCA	1 cut(s)	1599
FblI	GTMKAC	1 cut(s)	186
Fnu4HI	GCNGC	5 cut(s)	268, 530, 545, 720, 1446
FokI	GGATG	2 cut(s)	759, 1286
FriOI	GRGCYC	2 cut(s)	277, 598
FseI	GGCCGGCC	1 cut(s)	507
Fsp4HI	GCNGC	5 cut(s)	268, 530, 545, 720, 1446
GlaI	GCGC	5 cut(s)	251, 266, 315, 317, 1532
GluI	GCNGC	5 cut(s)	268, 530, 545, 720, 1446
GsaI	CCCAGC	1 cut(s)	274
GsuI	CTGGAG	4 cut(s)	185, 335, 599, 1460
HapII	CCGG	7 cut(s)	388, 400, 448, 479, 504, 776, 840
HgaI	GACGC	2 cut(s)	1448, 1559
HhaI	GCGC	5 cut(s)	252, 267, 316, 318, 1533
Hin1I	GRCGYC	1 cut(s)	1570
Hin1II	CATG	4 cut(s)	817, 991, 1115, 1253
Hin6I	GCGC	5 cut(s)	250, 265, 314, 316, 1531
HinP1I	GCGC	5 cut(s)	250, 265, 314, 316, 1531
HincII	GTYRAC	2 cut(s)	187, 1326
HindII	GTYRAC	2 cut(s)	187, 1326
HindIII	AAGCTT	2 cut(s)	1374, 1593
HinfI	GANTC	2 cut(s)	746, 1408
HpaI	GTTAAC	1 cut(s)	1326
HpaII	CCGG	7 cut(s)	388, 400, 448, 479, 504, 776, 840
HphI	GGTGA	6 cut(s)	14, 28, 115, 286, 529, 1211
Hpy166II	GTNNAC	3 cut(s)	187, 898, 1326
Hpy188I	TCNGA	6 cut(s)	172, 905, 1059, 1321, 1413, 1604
Hpy188III	TCNNGA	6 cut(s)	202, 379, 460, 479, 1112, 1130
Hpy8I	GTNNAC	3 cut(s)	187, 898, 1326
Hpy99I	CGWCG	4 cut(s)	176, 188, 191, 1575
HpyCH4III	ACNGT	2 cut(s)	456, 496
HpyCH4IV	ACGT	1 cut(s)	1468
HpyCH4V	TGCA	2 cut(s)	4, 607
HpyF10VI	GCNNNNNNNGC	3 cut(s)	311, 371, 1451
HpyF3I	CTNAG	3 cut(s)	1393, 1455, 1478
HpySE526I	ACGT	1 cut(s)	1468
Hsp92I	GRCGYC	1 cut(s)	1570
Hsp92II	CATG	4 cut(s)	817, 991, 1115, 1253
HspAI	GCGC	5 cut(s)	250, 265, 314, 316, 1531
Kpn2I	TCCGGA	1 cut(s)	478
KroI	GCCGGC	1 cut(s)	503
KroNI	GCCGGC	1 cut(s)	505
Ksp22I	TGATCA	1 cut(s)	1599
KspAI	GTTAAC	1 cut(s)	1326
Kzo9I	GATC	6 cut(s)	730, 954, 1012, 1177, 1574, 1599
LmnI	GCTCC	6 cut(s)	173, 390, 481, 574, 593, 887
Lsp1109I	GCAGC	1 cut(s)	1432
LweI	GCATC	1 cut(s)	372
MaeII	ACGT	1 cut(s)	1468
MaeIII	GTNAC	4 cut(s)	395, 862, 1469, 1516
MalI	GATC	6 cut(s)	732, 956, 1014, 1179, 1576, 1601
MboI	GATC	6 cut(s)	730, 954, 1012, 1177, 1574, 1599
MfeI	CAATTG	1 cut(s)	1035
MflI	RGATCY	3 cut(s)	954, 1012, 1177
MhlI	GDGCHC	3 cut(s)	277, 598, 1170
MluCI	AATT	5 cut(s)	26, 996, 1035, 1040, 1136
MlyI	GAGTC	1 cut(s)	755
MmeI	TCCRAC	2 cut(s)	195, 468
MroI	TCCGGA	1 cut(s)	478
MroNI	GCCGGC	1 cut(s)	503
MroXI	GAANNNNTTC	1 cut(s)	455
MseI	TTAA	5 cut(s)	465, 648, 1080, 1325, 1425
MslI	CAYNNNNRTG	2 cut(s)	1113, 1224
MspA1I	CMGCKG	1 cut(s)	511
MspI	CCGG	7 cut(s)	388, 400, 448, 479, 504, 776, 840
MspR9I	CCNGG	8 cut(s)	280, 535, 550, 777, 840, 1171, 1293, 1439
MunI	CAATTG	1 cut(s)	1035
MvaI	CCWGG	6 cut(s)	280, 535, 550, 1171, 1293, 1439
MvnI	CGCG	4 cut(s)	267, 314, 316, 722
MwoI	GCNNNNNNNGC	3 cut(s)	311, 371, 1451
NaeI	GCCGGC	1 cut(s)	505
NciI	CCSGG	2 cut(s)	777, 840
NdeII	GATC	6 cut(s)	730, 954, 1012, 1177, 1574, 1599
NgoMIV	GCCGGC	1 cut(s)	503
NlaIII	CATG	4 cut(s)	817, 991, 1115, 1253
NlaIV	GGNNCC	8 cut(s)	275, 276, 483, 528, 927, 956, 1179, 1203
NmeAIII	GCCGAG	1 cut(s)	417
NmuCI	GTSAC	1 cut(s)	862
NspI	RCATGY	2 cut(s)	817, 1253
PagI	TCATGA	1 cut(s)	1111
PasI	CCCWGGG	3 cut(s)	279, 534, 549
PauI	GCGCGC	1 cut(s)	314
PceI	AGGCCT	1 cut(s)	374
PciI	ACATGT	1 cut(s)	1249
PcsI	WCGNNNNNNNCGW	1 cut(s)	180
PdiI	GCCGGC	1 cut(s)	505
PdmI	GAANNNNTTC	1 cut(s)	455
PfeI	GAWTC	1 cut(s)	1408
PflMI	CCANNNNNTGG	2 cut(s)	540, 555
PfoI	TCCNGGA	1 cut(s)	775
PkrI	GCNGC	5 cut(s)	269, 531, 546, 721, 1447
PleI	GAGTC	1 cut(s)	754
PpsI	GAGTC	1 cut(s)	754
Ppu21I	YACGTR	1 cut(s)	1469
PpuMI	RGGWCCY	1 cut(s)	289
PscI	ACATGT	1 cut(s)	1249
PsiI	TTATAA	2 cut(s)	753, 1383
Psp124BI	GAGCTC	1 cut(s)	598
Psp5II	RGGWCCY	1 cut(s)	289
Psp6I	CCWGG	6 cut(s)	278, 533, 548, 1169, 1291, 1437
PspFI	CCCAGC	1 cut(s)	270
PspGI	CCWGG	6 cut(s)	278, 533, 548, 1169, 1291, 1437
PspN4I	GGNNCC	8 cut(s)	275, 276, 483, 528, 927, 956, 1179, 1203
PspOMI	GGGCCC	1 cut(s)	273
PspPI	GGNCC	8 cut(s)	99, 212, 241, 273, 274, 289, 501, 506
PspPPI	RGGWCCY	1 cut(s)	289
PsuI	RGATCY	3 cut(s)	954, 1012, 1177
PteI	GCGCGC	1 cut(s)	314
RigI	GGCCGGCC	1 cut(s)	507
RsaI	GTAC	2 cut(s)	950, 1398
RsaNI	GTAC	2 cut(s)	949, 1397
RseI	CAYNNNNRTG	2 cut(s)	1113, 1224
SacI	GAGCTC	1 cut(s)	598
SalI	GTCGAC	1 cut(s)	185
SaqAI	TTAA	5 cut(s)	465, 648, 1080, 1325, 1425
SatI	GCNGC	5 cut(s)	268, 530, 545, 720, 1446
Sau3AI	GATC	6 cut(s)	730, 954, 1012, 1177, 1574, 1599
Sau96I	GGNCC	8 cut(s)	99, 212, 241, 273, 274, 289, 501, 506
SchI	GAGTC	1 cut(s)	755
ScrFI	CCNGG	8 cut(s)	280, 535, 550, 777, 840, 1171, 1293, 1439
SduI	GDGCHC	3 cut(s)	277, 598, 1170
SfaNI	GCATC	1 cut(s)	372
SfiI	GGCCNNNNNGGCC	1 cut(s)	371
SgrDI	CGTCGACG	1 cut(s)	185
SinI	GGWCC	2 cut(s)	99, 289
SmiMI	CAYNNNNRTG	2 cut(s)	1113, 1224
SnaBI	TACGTA	1 cut(s)	1469
Sse9I	AATT	5 cut(s)	26, 996, 1035, 1040, 1136
SseBI	AGGCCT	1 cut(s)	374
SsiI	CCGC	7 cut(s)	244, 267, 509, 530, 545, 720, 958
SspI	AATATT	3 cut(s)	475, 1104, 1367
SstI	GAGCTC	1 cut(s)	598
StuI	AGGCCT	1 cut(s)	374
StyD4I	CCNGG	8 cut(s)	278, 533, 548, 775, 838, 1169, 1291, 1437
TaaI	ACNGT	2 cut(s)	456, 496
TaiI	ACGT	1 cut(s)	1471
TaqI	TCGA	5 cut(s)	186, 261, 459, 733, 1573
TasI	AATT	5 cut(s)	26, 996, 1035, 1040, 1136
TauI	GCSGC	4 cut(s)	270, 532, 547, 722
TfiI	GAWTC	1 cut(s)	1408
Tru1I	TTAA	5 cut(s)	465, 648, 1080, 1325, 1425
Tru9I	TTAA	5 cut(s)	465, 648, 1080, 1325, 1425
TscAI	CASTG	1 cut(s)	618
TseFI	GTSAC	1 cut(s)	862
TseI	GCWGC	1 cut(s)	1445
Tsp45I	GTSAC	1 cut(s)	862
TspDTI	ATGAA	5 cut(s)	834, 1097, 1131, 1149, 1362
TspGWI	ACGGA	2 cut(s)	446, 816
TspRI	CASTG	1 cut(s)	618
Van91I	CCANNNNNTGG	2 cut(s)	540, 555
VpaK11BI	GGWCC	2 cut(s)	99, 289
XapI	RAATTY	1 cut(s)	996
XceI	RCATGY	2 cut(s)	817, 1253
XmiI	GTMKAC	1 cut(s)	186
XmnI	GAANNNNTTC	1 cut(s)	455

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.