Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0005441

Physical Location & Seq

Genomic Coordinates Reverse (-)

8701995 .. 8706546

Gene Structure 4552 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG116400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1803 bp

ATGCAACTCCTCCAAACCCCTCACCAATTCCTCTTCACCTTCCCTCCCCCTAAAACCCTAAACCCTTCTCCCCACTCCAAACCCCAACCCCAACCCCAACCCAAATGGACGACCATTCCTTATCTCACCCATTCCCCTCCCACCAACCCCTTCAAACCCAAAGCCTTGAGCTCCGACGAGTTCCCCGTCGACGAGACCTTCCTCCAGAACTTCGGCCCAAAGGACAAGGAAACCGAAGACGAGGCCCGCAAGCGCAACTGGGTCGAGCGCGGCTGGGCCCCCTGGGAGGAGGTCCTCACCCCCGAGGCCGATTTCGCGCGCAAATCCCTCAACGAAGGCGAAGAGGTCGCCCTCCAGTCCCCCGAGGCCATCGAGGCCTTCAACATGCTCCGGCCCAGTTACCGGAAGAAGAAGATGGAGGAGATGGGGCTCACGGAGGACGACTACTACCGGAAACAGTTCGAGATTAAGGGGAATATTCCGGAGCCGTTGGAGACGGTCTGGGCCGGCCCGCTGGTGGTGAGACAGGTGCCGCCCAGGGATTGGCCGCCGAGGGATTGGGAGGTGGATAAGGAGGAGCTGGAGTATATAAGAGGAGCTCATAAGTTGCAAGCAGTGAGGGTAAAGCTGAGTGATTTGGAGAGTGGGGCTAAAGTGGAAAATGATGAGCTGTGTTTGGATAGGTATAAGGTGTTTTTGAAGCAGTATAAGGAGTGGGTCGCCGCGAATAAGGATCGATTGGAGGAGGAGTCTTATAAGTATGACCAAGATTACCATCCGGGAAGGAGGAAGAGAGGCAAGGACTACAAAGAGGGCATGTATGAACTTCCGTTTTATTACCCCGGACAAATCTGTGAAGGGAAAGTGACATCTATACATCTGTATCAAGGAGCATTTGTGGACATTGGAGGTGTATATGATGGGTGGGTTCCTATAAAAAATAACGACTGGTACTGGATCCGCCATCACATAAAAGTTGGTATGCGTGTCATGGTTGAAATTCTGGCAAAACGAGATCCTTATCGCTTTCGGTTTCCAATTGAATTGCGTTTTGTCTATCCGAATATAGACCACCTTATCTTTAACAGGTTTGACTTTCCACCAATATTTCATCATGATGAAGATACTAATCCAGATGAATTACGGCGTGATTGTGGAAGACCTCCTGTGCCCAGGAAGGATCCAAAAGATAAGCCCGTAGAGGAACCTTTATTGTCAAATCACCCTTATGTTGATAAGTTGTGGCAGATACATGTTGCTGAACAGATGATTTTGGATGATGTGGAGGCTAATCCTGGGAAATATAAAGACAAAAAACTATCAGAGTTAACTGATACTGAAGATTTGAATGAAGAAAATAGTATTGAATATACAAAAGCTTATTATAAGAAAACCTTAGTACCAAAAGTGATTCTGAAAACAAGCGTTAAAGAACTTGACCTGGAGGCTGCCTTTGCTGAGCGTCAGCTACGTAACACACTAAGAAGGGAGACAGAAGAGAGAGGAGAGGAATACAAAGTTACCAAAATGAGGCGCAATGTTGAGATGGATGAGTATGACTTCTTACATTGGCGTCGATCATTGGAGGAAAGAGAAGCTTTGATCAGAGATATAAGCTGGTATTGCAAGAAGTTCTATATGTTTTTGATGCTATGTAATTTTATCTATATACAAGTTTTACATTCATTGTTCTACTACTGTTTAGGTCAATCAGTACTTTCCCGTCCCCATTGTGGATATATGAGTGTCACCCATGTTGGACCTCTATTGAACTTGAATATTTTGATTTCATTTACACACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000229 GO:0005575 GO:0005622 GO:0005623 GO:0005694 GO:0005737 GO:0005829 GO:0009295 GO:0009507 GO:0009508 GO:0009532 GO:0009536 GO:0009570 GO:0042646 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

600

Amino Acids

71.35

Weight (kDa)

5.98

Isoelectric Point (pI)

53.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005441)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48500 AT3G48500
fragaria_vesca	FvH4_5g07670 FvH4_5g07670 FvH4_5g07670
malus_domestica	MD14G1162400.v1.1
prunus_persica	Prupe.5G155500_v2.0.a1
pyrus_communis	pycom14g13530
rosa_chinensis	RchiOBHm_Chr1g0380381 RchiOBHm_Chr7g0190801
rosa_laevigata	RLG00000004495 RLG00000004556 RLG00000026308
rosa_multiflora	Rmu_sc0002819.1_g000003 Rmu_sc0003249.1_g000020
rosa_roxburghii	Rroxscaffold_3G00264290 Rroxscaffold_4G00279440
rosa_rugosa	Rorug04G0085500 Rorug06G0507200
rosa_samantha	Rh1CG414500 Rh4AG090600 Rh4BG147500 Rh4CG098900 Rh7AG113800 Rh7BG116400 Rh7CG119100 Rh7DG117700
rosa_wichuraiana	Rw1G038700 Rw7G009930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	756, 1386
AccB1I	GGYRCC	1 cut(s)	529
AccB7I	CCANNNNNTGG	1 cut(s)	543
AccI	GTMKAC	1 cut(s)	189
AccII	CGCG	4 cut(s)	270, 317, 319, 725
AccIII	TCCGGA	1 cut(s)	481
AciI	CCGC	7 cut(s)	247, 270, 512, 533, 548, 723, 961
AclWI	GGATC	6 cut(s)	741, 952, 965, 1010, 1175, 1188
AcoI	YGGCCR	1 cut(s)	545
AcsI	RAATTY	1 cut(s)	999
AcuI	CTGAAG	1 cut(s)	1359
AcyI	GRCGYC	1 cut(s)	1573
AfaI	GTAC	3 cut(s)	953, 1401, 1716
AfiI	CCNNNNNNNGG	6 cut(s)	286, 402, 517, 543, 1530, 1733
AflIII	ACRYGT	1 cut(s)	1252
AgsI	TTSAA	9 cut(s)	154, 382, 700, 998, 1043, 1348, 1367, 1771, 1777
AjnI	CCWGG	5 cut(s)	281, 536, 1172, 1294, 1440
AluBI	AGCT	9 cut(s)	171, 580, 599, 628, 670, 1379, 1468, 1598, 1617
AluI	AGCT	9 cut(s)	171, 580, 599, 628, 670, 1379, 1468, 1598, 1617
Alw21I	GWGCWC	2 cut(s)	173, 601
Alw26I	GTCTC	4 cut(s)	188, 488, 517, 1484
AlwI	GGATC	6 cut(s)	741, 952, 965, 1010, 1175, 1188
Ama87I	CYCGRG	2 cut(s)	302, 362
Aor13HI	TCCGGA	1 cut(s)	481
ApaI	GGGCCC	1 cut(s)	280
ApeKI	GCWGC	1 cut(s)	1448
ApoI	RAATTY	1 cut(s)	999
Asp700I	GAANNNNTTC	1 cut(s)	458
AspLEI	GCGC	5 cut(s)	255, 270, 319, 321, 1536
AspS9I	GGNCC	9 cut(s)	215, 244, 276, 277, 292, 393, 504, 509, 1760
AsuC2I	CCSGG	2 cut(s)	780, 843
AsuHPI	GGTGA	7 cut(s)	14, 28, 118, 289, 532, 1214, 1741
AvaI	CYCGRG	2 cut(s)	302, 362
AvaII	GGWCC	2 cut(s)	292, 1760
BaeGI	GKGCMC	2 cut(s)	280, 1173
BaeI	ACNNNNGTAYC	4 cut(s)	866, 899, 1383, 1416
BamHI	GGATCC	2 cut(s)	957, 1180
BanI	GGYRCC	1 cut(s)	529
BanII	GRGCYC	4 cut(s)	173, 280, 432, 601
BbsI	GAAGAC	2 cut(s)	243, 1165
Bbv12I	GWGCWC	2 cut(s)	173, 601
BbvI	GCAGC	1 cut(s)	1435
BccI	CCATC	7 cut(s)	377, 409, 418, 783, 914, 972, 1540
BceAI	ACGGC	2 cut(s)	472, 1160
BcgI	CGANNNNNNTGC	2 cut(s)	244, 278
BciT130I	CCWGG	5 cut(s)	283, 538, 1174, 1296, 1442
BclI	TGATCA	1 cut(s)	1602
BcnI	CCSGG	2 cut(s)	780, 843
BcoDI	GTCTC	4 cut(s)	188, 488, 517, 1484
BglI	GCCNNNNNGGC	1 cut(s)	374
BisI	GCNGC	5 cut(s)	271, 533, 548, 723, 1449
BlpI	GCTNAGC	1 cut(s)	1458
BlsI	GCNGC	5 cut(s)	272, 534, 549, 724, 1450
BmcAI	AGTACT	1 cut(s)	1716
Bme1390I	CCNGG	7 cut(s)	283, 538, 780, 843, 1174, 1296, 1442
Bme18I	GGWCC	2 cut(s)	292, 1760
BmeT110I	CYCGRG	2 cut(s)	302, 362
BmgT120I	GGNCC	9 cut(s)	215, 244, 276, 277, 292, 393, 504, 509, 1760
BmiI	GGNNCC	8 cut(s)	278, 279, 486, 531, 930, 959, 1182, 1206
BmrFI	CCNGG	7 cut(s)	283, 538, 780, 843, 1174, 1296, 1442
BmrI	ACTGGG	2 cut(s)	268, 390
BmsI	GCATC	1 cut(s)	1638
BmuI	ACTGGG	2 cut(s)	268, 390
BpiI	GAAGAC	2 cut(s)	243, 1165
BpmI	CTGGAG	4 cut(s)	188, 338, 602, 1463
Bpu1102I	GCTNAGC	1 cut(s)	1458
BpuEI	CTTGAG	1 cut(s)	187
BpuMI	CCSGG	2 cut(s)	780, 843
Bsa29I	ATCGAT	1 cut(s)	736
BsaAI	YACGTR	1 cut(s)	1472
BsaBI	GATNNNNATC	3 cut(s)	774, 1020, 1128
BsaHI	GRCGYC	1 cut(s)	1573
BsaI	GGTCTC	1 cut(s)	188
BsaWI	WCCGGW	3 cut(s)	402, 450, 481
BsaXI	ACNNNNNCTCC	8 cut(s)	28, 58, 569, 599, 734, 764, 882, 912
Bsc4I	CCNNNNNNNGG	6 cut(s)	286, 402, 517, 543, 1530, 1733
Bse118I	RCCGGY	1 cut(s)	506
Bse1I	ACTGG	5 cut(s)	263, 355, 396, 953, 959
Bse3DI	GCAATG	1 cut(s)	1543
Bse8I	GATNNNNATC	3 cut(s)	774, 1020, 1128
BseAI	TCCGGA	1 cut(s)	481
BseBI	CCWGG	5 cut(s)	283, 538, 1174, 1296, 1442
BseCI	ATCGAT	1 cut(s)	736
BseGI	GGATG	3 cut(s)	775, 1282, 1555
BseJI	GATNNNNATC	3 cut(s)	774, 1020, 1128
BseLI	CCNNNNNNNGG	6 cut(s)	286, 402, 517, 543, 1530, 1733
BseMI	GCAATG	1 cut(s)	1543
BseMII	CTCAG	2 cut(s)	620, 1449
BseNI	ACTGG	5 cut(s)	263, 355, 396, 953, 959
BsePI	GCGCGC	1 cut(s)	317
BseRI	GAGGAG	7 cut(s)	302, 434, 590, 609, 758, 761, 1518
BseSI	GKGCMC	2 cut(s)	280, 1173
BseXI	GCAGC	1 cut(s)	1435
BseYI	CCCAGC	1 cut(s)	273
Bsh1236I	CGCG	4 cut(s)	270, 317, 319, 725
BshNI	GGYRCC	1 cut(s)	529
BshVI	ATCGAT	1 cut(s)	736
BsiHKAI	GWGCWC	2 cut(s)	173, 601
BsiHKCI	CYCGRG	2 cut(s)	302, 362
BsiSI	CCGG	7 cut(s)	391, 403, 451, 482, 507, 779, 843
BslFI	GGGAC	2 cut(s)	343, 1710
BslI	CCNNNNNNNGG	6 cut(s)	286, 402, 517, 543, 1530, 1733
BsmAI	GTCTC	4 cut(s)	188, 488, 517, 1484
BsmBI	CGTCTC	1 cut(s)	488
BsmFI	GGGAC	2 cut(s)	343, 1710
Bso31I	GGTCTC	1 cut(s)	188
BsoBI	CYCGRG	2 cut(s)	302, 362
Bsp120I	GGGCCC	1 cut(s)	276
Bsp1286I	GDGCHC	5 cut(s)	173, 280, 432, 601, 1173
Bsp13I	TCCGGA	1 cut(s)	481
Bsp143I	GATC	6 cut(s)	733, 957, 1015, 1180, 1577, 1602
Bsp1720I	GCTNAGC	1 cut(s)	1458
BspACI	CCGC	7 cut(s)	247, 270, 512, 533, 548, 723, 961
BspCNI	CTCAG	2 cut(s)	621, 1450
BspDI	ATCGAT	1 cut(s)	736
BspEI	TCCGGA	1 cut(s)	481
BspFNI	CGCG	4 cut(s)	270, 317, 319, 725
BspHI	TCATGA	1 cut(s)	1114
BspLI	GGNNCC	8 cut(s)	278, 279, 486, 531, 930, 959, 1182, 1206
BspPI	GGATC	6 cut(s)	741, 952, 965, 1010, 1175, 1188
BspT107I	GGYRCC	1 cut(s)	529
BspTNI	GGTCTC	1 cut(s)	188
BsrDI	GCAATG	1 cut(s)	1543
BsrFI	RCCGGY	1 cut(s)	506
BsrI	ACTGG	5 cut(s)	263, 355, 396, 953, 959
BssAI	RCCGGY	1 cut(s)	506
BssHII	GCGCGC	1 cut(s)	317
BssMI	GATC	6 cut(s)	733, 957, 1015, 1180, 1577, 1602
BssNI	GRCGYC	1 cut(s)	1573
Bst2UI	CCWGG	5 cut(s)	283, 538, 1174, 1296, 1442
Bst4CI	ACNGT	3 cut(s)	459, 499, 1700
Bst6I	CTCTTC	4 cut(s)	38, 336, 785, 1491
BstACI	GRCGYC	1 cut(s)	1573
BstBAI	YACGTR	1 cut(s)	1472
BstC8I	GCNNGC	6 cut(s)	247, 251, 319, 508, 512, 612
BstDEI	CTNAG	4 cut(s)	629, 1396, 1458, 1481
BstF5I	GGATG	3 cut(s)	775, 1282, 1555
BstFNI	CGCG	4 cut(s)	270, 317, 319, 725
BstHHI	GCGC	5 cut(s)	255, 270, 319, 321, 1536
BstKTI	GATC	6 cut(s)	736, 960, 1018, 1183, 1580, 1605
BstMAI	GTCTC	4 cut(s)	188, 488, 517, 1484
BstMBI	GATC	6 cut(s)	733, 957, 1015, 1180, 1577, 1602
BstMWI	GCNNNNNNNGC	4 cut(s)	314, 374, 1454, 1623
BstNI	CCWGG	5 cut(s)	283, 538, 1174, 1296, 1442
BstNSI	RCATGY	3 cut(s)	388, 820, 1256
BstSCI	CCNGG	7 cut(s)	281, 536, 778, 841, 1172, 1294, 1440
BstSLI	GKGCMC	2 cut(s)	280, 1173
BstSNI	TACGTA	1 cut(s)	1472
BstUI	CGCG	4 cut(s)	270, 317, 319, 725
BstV1I	GCAGC	1 cut(s)	1435
BstV2I	GAAGAC	2 cut(s)	243, 1165
BstX2I	RGATCY	3 cut(s)	957, 1015, 1180
BstYI	RGATCY	3 cut(s)	957, 1015, 1180
Bsu15I	ATCGAT	1 cut(s)	736
BsuTUI	ATCGAT	1 cut(s)	736
BtsCI	GGATG	3 cut(s)	775, 1282, 1555
BtsI	GCAGTG	1 cut(s)	621
BtsIMutI	CAGTG	2 cut(s)	621, 1798
Cac8I	GCNNGC	6 cut(s)	247, 251, 319, 508, 512, 612
CciI	TCATGA	1 cut(s)	1114
CfoI	GCGC	5 cut(s)	255, 270, 319, 321, 1536
Cfr10I	RCCGGY	1 cut(s)	506
Cfr13I	GGNCC	9 cut(s)	215, 244, 276, 277, 292, 393, 504, 509, 1760
ClaI	ATCGAT	1 cut(s)	736
CseI	GACGC	2 cut(s)	1451, 1562
Csp6I	GTAC	3 cut(s)	952, 1400, 1715
CviAII	CATG	6 cut(s)	385, 817, 991, 1115, 1253, 1754
CviQI	GTAC	3 cut(s)	952, 1400, 1715
DdeI	CTNAG	4 cut(s)	629, 1396, 1458, 1481
DpnI	GATC	6 cut(s)	735, 959, 1017, 1182, 1579, 1604
DpnII	GATC	6 cut(s)	733, 957, 1015, 1180, 1577, 1602
EaeI	YGGCCR	1 cut(s)	545
Eam1104I	CTCTTC	4 cut(s)	38, 336, 785, 1491
EarI	CTCTTC	4 cut(s)	38, 336, 785, 1491
EciI	GGCGGA	1 cut(s)	950
Ecl136II	GAGCTC	2 cut(s)	171, 599
Eco105I	TACGTA	1 cut(s)	1472
Eco147I	AGGCCT	1 cut(s)	377
Eco24I	GRGCYC	4 cut(s)	173, 280, 432, 601
Eco31I	GGTCTC	1 cut(s)	188
Eco47I	GGWCC	2 cut(s)	292, 1760
Eco53kI	GAGCTC	2 cut(s)	171, 599
Eco57I	CTGAAG	1 cut(s)	1359
Eco88I	CYCGRG	2 cut(s)	302, 362
EcoICRI	GAGCTC	2 cut(s)	171, 599
EcoO109I	RGGNCCY	2 cut(s)	277, 292
EcoRII	CCWGG	5 cut(s)	281, 536, 1172, 1294, 1440
EcoT38I	GRGCYC	4 cut(s)	173, 280, 432, 601
Esp3I	CGTCTC	1 cut(s)	488
FaeI	CATG	6 cut(s)	388, 820, 994, 1118, 1256, 1757
FalI	AAGNNNNNCTT	4 cut(s)	1379, 1411, 1582, 1614
FaqI	GGGAC	2 cut(s)	343, 1710
FatI	CATG	6 cut(s)	384, 816, 990, 1114, 1252, 1753
FauI	CCCGC	2 cut(s)	254, 519
FbaI	TGATCA	1 cut(s)	1602
FblI	GTMKAC	1 cut(s)	189
Fnu4HI	GCNGC	5 cut(s)	271, 533, 548, 723, 1449
FokI	GGATG	3 cut(s)	762, 1289, 1562
FriOI	GRGCYC	4 cut(s)	173, 280, 432, 601
FseI	GGCCGGCC	1 cut(s)	510
Fsp4HI	GCNGC	5 cut(s)	271, 533, 548, 723, 1449
GlaI	GCGC	5 cut(s)	254, 269, 318, 320, 1535
GluI	GCNGC	5 cut(s)	271, 533, 548, 723, 1449
GsaI	CCCAGC	1 cut(s)	277
GsuI	CTGGAG	4 cut(s)	188, 338, 602, 1463
HapII	CCGG	7 cut(s)	391, 403, 451, 482, 507, 779, 843
HgaI	GACGC	2 cut(s)	1451, 1562
HhaI	GCGC	5 cut(s)	255, 270, 319, 321, 1536
Hin1I	GRCGYC	1 cut(s)	1573
Hin1II	CATG	6 cut(s)	388, 820, 994, 1118, 1256, 1757
Hin6I	GCGC	5 cut(s)	253, 268, 317, 319, 1534
HinP1I	GCGC	5 cut(s)	253, 268, 317, 319, 1534
HincII	GTYRAC	2 cut(s)	190, 1329
HindII	GTYRAC	2 cut(s)	190, 1329
HindIII	AAGCTT	2 cut(s)	1377, 1596
HinfI	GANTC	2 cut(s)	749, 1411
HpaI	GTTAAC	1 cut(s)	1329
HpaII	CCGG	7 cut(s)	391, 403, 451, 482, 507, 779, 843
HphI	GGTGA	7 cut(s)	14, 28, 118, 289, 532, 1214, 1741
Hpy166II	GTNNAC	3 cut(s)	190, 901, 1329
Hpy188I	TCNGA	5 cut(s)	175, 1062, 1324, 1416, 1607
Hpy188III	TCNNGA	5 cut(s)	205, 463, 482, 1115, 1133
Hpy8I	GTNNAC	3 cut(s)	190, 901, 1329
Hpy99I	CGWCG	4 cut(s)	179, 191, 194, 1578
HpyCH4III	ACNGT	3 cut(s)	459, 499, 1700
HpyCH4IV	ACGT	1 cut(s)	1471
HpyCH4V	TGCA	3 cut(s)	4, 610, 1626
HpyF10VI	GCNNNNNNNGC	4 cut(s)	314, 374, 1454, 1623
HpyF3I	CTNAG	4 cut(s)	629, 1396, 1458, 1481
HpySE526I	ACGT	1 cut(s)	1471
Hsp92I	GRCGYC	1 cut(s)	1573
Hsp92II	CATG	6 cut(s)	388, 820, 994, 1118, 1256, 1757
HspAI	GCGC	5 cut(s)	253, 268, 317, 319, 1534
Kpn2I	TCCGGA	1 cut(s)	481
KroI	GCCGGC	1 cut(s)	506
KroNI	GCCGGC	1 cut(s)	508
Ksp22I	TGATCA	1 cut(s)	1602
KspAI	GTTAAC	1 cut(s)	1329
Kzo9I	GATC	6 cut(s)	733, 957, 1015, 1180, 1577, 1602
LmnI	GCTCC	6 cut(s)	176, 393, 484, 577, 596, 890
Lsp1109I	GCAGC	1 cut(s)	1435
LweI	GCATC	1 cut(s)	1638
MaeII	ACGT	1 cut(s)	1471
MaeIII	GTNAC	5 cut(s)	398, 865, 1472, 1519, 1747
MalI	GATC	6 cut(s)	735, 959, 1017, 1182, 1579, 1604
MboI	GATC	6 cut(s)	733, 957, 1015, 1180, 1577, 1602
MfeI	CAATTG	1 cut(s)	1038
MflI	RGATCY	3 cut(s)	957, 1015, 1180
MhlI	GDGCHC	5 cut(s)	173, 280, 432, 601, 1173
MluCI	AATT	6 cut(s)	26, 999, 1038, 1043, 1139, 1657
MlyI	GAGTC	1 cut(s)	758
MmeI	TCCRAC	3 cut(s)	198, 471, 1738
MroI	TCCGGA	1 cut(s)	481
MroNI	GCCGGC	1 cut(s)	506
MroXI	GAANNNNTTC	1 cut(s)	458
MseI	TTAA	4 cut(s)	468, 1083, 1328, 1428
MslI	CAYNNNNRTG	2 cut(s)	1116, 1227
MspA1I	CMGCKG	1 cut(s)	514
MspI	CCGG	7 cut(s)	391, 403, 451, 482, 507, 779, 843
MspR9I	CCNGG	7 cut(s)	283, 538, 780, 843, 1174, 1296, 1442
MunI	CAATTG	1 cut(s)	1038
MvaI	CCWGG	5 cut(s)	283, 538, 1174, 1296, 1442
MvnI	CGCG	4 cut(s)	270, 317, 319, 725
MwoI	GCNNNNNNNGC	4 cut(s)	314, 374, 1454, 1623
NaeI	GCCGGC	1 cut(s)	508
NciI	CCSGG	2 cut(s)	780, 843
NdeII	GATC	6 cut(s)	733, 957, 1015, 1180, 1577, 1602
NgoMIV	GCCGGC	1 cut(s)	506
NlaIII	CATG	6 cut(s)	388, 820, 994, 1118, 1256, 1757
NlaIV	GGNNCC	8 cut(s)	278, 279, 486, 531, 930, 959, 1182, 1206
NmeAIII	GCCGAG	1 cut(s)	576
NmuCI	GTSAC	2 cut(s)	865, 1747
NspI	RCATGY	3 cut(s)	388, 820, 1256
PagI	TCATGA	1 cut(s)	1114
PasI	CCCWGGG	2 cut(s)	282, 537
PauI	GCGCGC	1 cut(s)	317
PceI	AGGCCT	1 cut(s)	377
PciI	ACATGT	1 cut(s)	1252
PcsI	WCGNNNNNNNCGW	1 cut(s)	183
PdiI	GCCGGC	1 cut(s)	508
PdmI	GAANNNNTTC	1 cut(s)	458
PfeI	GAWTC	1 cut(s)	1411
PflMI	CCANNNNNTGG	1 cut(s)	543
PfoI	TCCNGGA	1 cut(s)	778
PkrI	GCNGC	5 cut(s)	272, 534, 549, 724, 1450
PleI	GAGTC	1 cut(s)	757
PpsI	GAGTC	1 cut(s)	757
Ppu21I	YACGTR	1 cut(s)	1472
PpuMI	RGGWCCY	1 cut(s)	292
PscI	ACATGT	1 cut(s)	1252
PsiI	TTATAA	2 cut(s)	756, 1386
Psp124BI	GAGCTC	2 cut(s)	173, 601
Psp5II	RGGWCCY	1 cut(s)	292
Psp6I	CCWGG	5 cut(s)	281, 536, 1172, 1294, 1440
PspFI	CCCAGC	1 cut(s)	273
PspGI	CCWGG	5 cut(s)	281, 536, 1172, 1294, 1440
PspN4I	GGNNCC	8 cut(s)	278, 279, 486, 531, 930, 959, 1182, 1206
PspOMI	GGGCCC	1 cut(s)	276
PspPI	GGNCC	9 cut(s)	215, 244, 276, 277, 292, 393, 504, 509, 1760
PspPPI	RGGWCCY	1 cut(s)	292
PsuI	RGATCY	3 cut(s)	957, 1015, 1180
PteI	GCGCGC	1 cut(s)	317
RigI	GGCCGGCC	1 cut(s)	510
RsaI	GTAC	3 cut(s)	953, 1401, 1716
RsaNI	GTAC	3 cut(s)	952, 1400, 1715
RseI	CAYNNNNRTG	2 cut(s)	1116, 1227
SacI	GAGCTC	2 cut(s)	173, 601
SalI	GTCGAC	1 cut(s)	188
SaqAI	TTAA	4 cut(s)	468, 1083, 1328, 1428
SatI	GCNGC	5 cut(s)	271, 533, 548, 723, 1449
Sau3AI	GATC	6 cut(s)	733, 957, 1015, 1180, 1577, 1602
Sau96I	GGNCC	9 cut(s)	215, 244, 276, 277, 292, 393, 504, 509, 1760
ScaI	AGTACT	1 cut(s)	1716
SchI	GAGTC	1 cut(s)	758
ScrFI	CCNGG	7 cut(s)	283, 538, 780, 843, 1174, 1296, 1442
SduI	GDGCHC	5 cut(s)	173, 280, 432, 601, 1173
SfaNI	GCATC	1 cut(s)	1638
SfiI	GGCCNNNNNGGCC	1 cut(s)	374
SgrDI	CGTCGACG	1 cut(s)	188
SinI	GGWCC	2 cut(s)	292, 1760
SmiMI	CAYNNNNRTG	2 cut(s)	1116, 1227
SmlI	CTYRAG	1 cut(s)	166
SmoI	CTYRAG	1 cut(s)	166
SnaBI	TACGTA	1 cut(s)	1472
Sse9I	AATT	6 cut(s)	26, 999, 1038, 1043, 1139, 1657
SseBI	AGGCCT	1 cut(s)	377
SsiI	CCGC	7 cut(s)	247, 270, 512, 533, 548, 723, 961
SspI	AATATT	3 cut(s)	478, 1107, 1780
SstI	GAGCTC	2 cut(s)	173, 601
StuI	AGGCCT	1 cut(s)	377
StyD4I	CCNGG	7 cut(s)	281, 536, 778, 841, 1172, 1294, 1440
TaaI	ACNGT	3 cut(s)	459, 499, 1700
TaiI	ACGT	1 cut(s)	1474
TaqI	TCGA	6 cut(s)	189, 264, 372, 462, 736, 1576
TasI	AATT	6 cut(s)	26, 999, 1038, 1043, 1139, 1657
TatI	WGTACW	1 cut(s)	1714
TauI	GCSGC	4 cut(s)	273, 535, 550, 725
TfiI	GAWTC	1 cut(s)	1411
Tru1I	TTAA	4 cut(s)	468, 1083, 1328, 1428
Tru9I	TTAA	4 cut(s)	468, 1083, 1328, 1428
TscAI	CASTG	1 cut(s)	621
TseFI	GTSAC	2 cut(s)	865, 1747
TseI	GCWGC	1 cut(s)	1448
Tsp45I	GTSAC	2 cut(s)	865, 1747
TspDTI	ATGAA	7 cut(s)	837, 1100, 1134, 1152, 1365, 1674, 1779
TspGWI	ACGGA	2 cut(s)	449, 819
TspRI	CASTG	1 cut(s)	621
Van91I	CCANNNNNTGG	1 cut(s)	543
VpaK11BI	GGWCC	2 cut(s)	292, 1760
XapI	RAATTY	1 cut(s)	999
XceI	RCATGY	3 cut(s)	388, 820, 1256
XmiI	GTMKAC	1 cut(s)	189
XmnI	GAANNNNTTC	1 cut(s)	458
ZrmI	AGTACT	1 cut(s)	1716

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.