Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0005441

Physical Location & Seq

Genomic Coordinates Forward (+)

57981973 .. 57986595

Gene Structure 4623 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00264290.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2046 bp

ATGCAACTCCTCCAAACCCCTCACCAATTCCTCTTCACCTTCCCTCCCCCTAAAACCCTAAACCCTTCTCCCCACTCCAAACCCCAACCTCCCAAATGGACCATTCCTTATCTCTTCCCCCTCACCCACTCCCCTCCCACCAACCCCTTCACACCCAAAGCCTTCAGCTCCGACGAGTTCCCCGTCGACGAGACCTTCCTCCAGAACTTCGGCCCAAAGGACAAGGAAACCGAAGACGAGGCCCGCAAGCGCAACTGGGTCGAGCGCGGCTGGGCCCCCTGGGAGGAGGTCCTCACCCCGGAGGCCGATTTCGCGCGCAAATCCCTCAACGAAGGCGAAGAGGTCGCCCTCCAGTCCCCCGAGGCCATCGAGGCCTTCAAGATGCTCCGGCCGAGTTACCGGAAGAAGAAGATGGAGGAGATGGGGCTCACGGAGGACGACTACTACCGGAAACAGTTCGAGATTAAGGGGAATATTCCGGAGCCGTTGGAGACGGTCTGGGCCGGCCCGCTGGTGGTGAGACAGGTGCCGCCCAGGGATTGGCCGCCCAGGGATTGGGAGGTGGATAAGGAGGAGCTGGAGTATATAAGAGGAGCTCATAAGTTGCAAGCAGTGAGGGTAAAGCTGAGTGATTTGGAGAGTGGGGCTAAAGTGGAAAATGATGAGCTGTGTTTGGATAGGTATAAGGTGTTTTTGAAGCAGTATAAGGAGTGGGTCGCCGCCAATAAGGATCGATTGGAGGAGGAGTCTTATAAGTATGACCAAGATTACCATCCGGGAAGGAGGAAGAGAGGCAAGGACTACAAAGAGGGCATGTATGAACTTCCGTTTTATTACCCCGGACAAATCTGTGAAGGAAAAGTGACATCTATACATCTGTATCAAGGAGCATTTGTGGACATCGGAGGTGTATATGATGGGTGGGTTCCTATAAAAAATAACGACTGGTACTGGATCCGCCATCACATAAAAGTTGGTATGCGTGTCATGGTTGAAATTCTGGCAAAACGAGATCCTTATCGCTTTCGGTTTCCAATTGAATTGCGTTTTGTCTATCCGAATATAGACCACGTTATCTTTAACAGGTTTGACTTTCCACCAATATTTCATCATGATGAAGATACTAATCCAGATGAATTACGGCGTGATTGTGGAAGACCTCCTGTGCCCAGGAAGGATCCAAAAGATAAGCCCGTAGAGGAACCTTTATTGTCAAATCACCCTTATGTTGATAAGTTGTGGCAGATACATGTTGCTGAACAGATGATTTTGGATGATGTGGAGGCTAATCCTGGGAAATATAAAGACAAAAAACTATCAGAGTTAACTGATACGGAAGATTTGAATGAAGAAAATAGTATTGAATATTCAAAAGCTTATTATAAGAAAACCTTAGTACCAAAAGTGATTCTGAAAACAAGCGTTAAAGAACTTGACCTGGAGGCTGCCTTTGCTGAGCGTCAGCTACGTAACACACTAAGAAGGGAGACAGAAGAGAGAGGAGAGGAATACAAAGTTACCAAAATGAGGCGCAATGTTGAGATGGACGAGTATGACTTCTTACATTGGCGTCGATCATTGGAGGAAAGAGAAGCTTTGATCAGAGATATAAGCTGCCGTAAGGCTCTTGGTCTACCACTGGAAGAGCCGGGGAGGTATGTGGAAGACAGCTATTTTGGAAAGGATCAATATGACCCGGACAACGCTCTATACCGGTATGACTACTGGGGAGAACCGAAAAACTCAGAGAAGAGCAAGCAAGAACGGCTGACAGATGCTCACAACAAAGCTATTGTTGGAAAGAGTACCGTGTGGTATGAAATGTCATATGACGATTGCATCAAACAGCGGATGCAAAGAGAAGCCAAGGGGATAAAACCAAGAGAATATGAGGAGGAAGATACAAACACAGGTGACGATGATGAAGACGGCGACGACGACTTTGATTTCAGCTTCTTGAATGAAACTGTTGATATGACCTCCCAGCCCCATGTTAATGGGACAGAATCTCCTACAATTTCCGATGAGGGCATATTTGAGGATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000229 GO:0005575 GO:0005622 GO:0005623 GO:0005694 GO:0005737 GO:0005829 GO:0009295 GO:0009507 GO:0009508 GO:0009532 GO:0009536 GO:0009570 GO:0042646 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

681

Amino Acids

80.58

Weight (kDa)

5.08

Isoelectric Point (pI)

48.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005441)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48500 AT3G48500
fragaria_vesca	FvH4_5g07670 FvH4_5g07670 FvH4_5g07670
malus_domestica	MD14G1162400.v1.1
prunus_persica	Prupe.5G155500_v2.0.a1
pyrus_communis	pycom14g13530
rosa_chinensis	RchiOBHm_Chr1g0380381 RchiOBHm_Chr7g0190801
rosa_laevigata	RLG00000004495 RLG00000004556 RLG00000026308
rosa_multiflora	Rmu_sc0002819.1_g000003 Rmu_sc0003249.1_g000020
rosa_roxburghii	Rroxscaffold_3G00264290 Rroxscaffold_4G00279440
rosa_rugosa	Rorug04G0085500 Rorug06G0507200
rosa_samantha	Rh1CG414500 Rh4AG090600 Rh4BG147500 Rh4CG098900 Rh7AG113800 Rh7BG116400 Rh7CG119100 Rh7DG117700
rosa_wichuraiana	Rw1G038700 Rw7G009930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	753, 1383
AccB1I	GGYRCC	1 cut(s)	526
AccB7I	CCANNNNNTGG	2 cut(s)	540, 555
AccI	GTMKAC	2 cut(s)	186, 1633
AccII	CGCG	3 cut(s)	267, 314, 316
AccIII	TCCGGA	1 cut(s)	478
AciI	CCGC	8 cut(s)	244, 267, 509, 530, 545, 720, 958, 1849
AclWI	GGATC	7 cut(s)	738, 949, 962, 1007, 1172, 1185, 1692
AcoI	YGGCCR	2 cut(s)	389, 542
AcsI	RAATTY	1 cut(s)	996
AcuI	CTGAAG	1 cut(s)	148
AcyI	GRCGYC	1 cut(s)	1570
AfaI	GTAC	3 cut(s)	950, 1398, 1807
AfiI	CCNNNNNNNGG	6 cut(s)	283, 298, 514, 540, 555, 1527
AflIII	ACRYGT	1 cut(s)	1249
AgeI	ACCGGT	1 cut(s)	1713
AgsI	TTSAA	8 cut(s)	379, 697, 995, 1040, 1345, 1364, 1371, 1960
AjnI	CCWGG	6 cut(s)	278, 533, 548, 1169, 1291, 1437
Alw21I	GWGCWC	1 cut(s)	598
Alw26I	GTCTC	4 cut(s)	185, 485, 514, 1481
AlwI	GGATC	7 cut(s)	738, 949, 962, 1007, 1172, 1185, 1692
Ama87I	CYCGRG	1 cut(s)	359
Aor13HI	TCCGGA	1 cut(s)	478
ApaI	GGGCCC	1 cut(s)	277
ApeKI	GCWGC	2 cut(s)	1445, 1614
ApoI	RAATTY	1 cut(s)	996
ArsI	GACNNNNNNTTYG	4 cut(s)	1658, 1690, 1925, 1957
AsiGI	ACCGGT	1 cut(s)	1713
Asp700I	GAANNNNTTC	1 cut(s)	455
AspLEI	GCGC	5 cut(s)	252, 267, 316, 318, 1533
AspS9I	GGNCC	8 cut(s)	99, 212, 241, 273, 274, 289, 501, 506
AsuC2I	CCSGG	5 cut(s)	299, 777, 840, 1650, 1697
AsuHPI	GGTGA	7 cut(s)	14, 28, 115, 286, 529, 1211, 1925
AvaI	CYCGRG	1 cut(s)	359
AvaII	GGWCC	2 cut(s)	99, 289
BaeGI	GKGCMC	2 cut(s)	277, 1170
BaeI	ACNNNNGTAYC	4 cut(s)	863, 896, 1380, 1413
BamHI	GGATCC	2 cut(s)	954, 1177
BanI	GGYRCC	1 cut(s)	526
BanII	GRGCYC	3 cut(s)	277, 429, 598
BbsI	GAAGAC	4 cut(s)	240, 1162, 1671, 1932
Bbv12I	GWGCWC	1 cut(s)	598
BbvI	GCAGC	2 cut(s)	1432, 1601
BccI	CCATC	7 cut(s)	374, 406, 415, 780, 911, 969, 1537
BceAI	ACGGC	5 cut(s)	469, 1157, 1602, 1781, 1945
BcgI	CGANNNNNNTGC	2 cut(s)	241, 275
BciT130I	CCWGG	6 cut(s)	280, 535, 550, 1171, 1293, 1439
BclI	TGATCA	1 cut(s)	1599
BcnI	CCSGG	5 cut(s)	299, 777, 840, 1650, 1697
BcoDI	GTCTC	4 cut(s)	185, 485, 514, 1481
BglI	GCCNNNNNGGC	1 cut(s)	371
BisI	GCNGC	6 cut(s)	268, 530, 545, 720, 1446, 1615
BlpI	GCTNAGC	1 cut(s)	1455
BlsI	GCNGC	6 cut(s)	269, 531, 546, 721, 1447, 1616
Bme18I	GGWCC	2 cut(s)	99, 289
BmeT110I	CYCGRG	1 cut(s)	359
BmgT120I	GGNCC	8 cut(s)	99, 212, 241, 273, 274, 289, 501, 506
BmiI	GGNNCC	8 cut(s)	275, 276, 483, 528, 927, 956, 1179, 1203
BmrI	ACTGGG	2 cut(s)	265, 1735
BmsI	GCATC	4 cut(s)	372, 1765, 1842, 1848
BmuI	ACTGGG	2 cut(s)	265, 1735
BpiI	GAAGAC	4 cut(s)	240, 1162, 1671, 1932
BpmI	CTGGAG	4 cut(s)	185, 335, 599, 1460
Bpu1102I	GCTNAGC	1 cut(s)	1455
BpuMI	CCSGG	5 cut(s)	299, 777, 840, 1650, 1697
Bsa29I	ATCGAT	1 cut(s)	733
BsaAI	YACGTR	1 cut(s)	1469
BsaBI	GATNNNNATC	3 cut(s)	771, 1017, 1125
BsaHI	GRCGYC	1 cut(s)	1570
BsaI	GGTCTC	1 cut(s)	185
BsaWI	WCCGGW	4 cut(s)	399, 447, 478, 1713
Bsc4I	CCNNNNNNNGG	6 cut(s)	283, 298, 514, 540, 555, 1527
Bse118I	RCCGGY	2 cut(s)	503, 1713
Bse1I	ACTGG	6 cut(s)	260, 352, 950, 956, 1644, 1730
Bse3DI	GCAATG	1 cut(s)	1540
Bse8I	GATNNNNATC	3 cut(s)	771, 1017, 1125
BseAI	TCCGGA	1 cut(s)	478
BseBI	CCWGG	6 cut(s)	280, 535, 550, 1171, 1293, 1439
BseCI	ATCGAT	1 cut(s)	733
BseGI	GGATG	3 cut(s)	772, 1279, 1857
BseJI	GATNNNNATC	3 cut(s)	771, 1017, 1125
BseLI	CCNNNNNNNGG	6 cut(s)	283, 298, 514, 540, 555, 1527
BseMI	GCAATG	1 cut(s)	1540
BseMII	CTCAG	3 cut(s)	617, 1446, 1758
BseNI	ACTGG	6 cut(s)	260, 352, 950, 956, 1644, 1730
BsePI	GCGCGC	1 cut(s)	314
BseRI	GAGGAG	8 cut(s)	299, 431, 587, 606, 755, 758, 1515, 1907
BseSI	GKGCMC	2 cut(s)	277, 1170
BseX3I	CGGCCG	1 cut(s)	389
BseXI	GCAGC	2 cut(s)	1432, 1601
BseYI	CCCAGC	2 cut(s)	270, 1983
Bsh1236I	CGCG	3 cut(s)	267, 314, 316
Bsh1285I	CGRYCG	1 cut(s)	392
BshNI	GGYRCC	1 cut(s)	526
BshTI	ACCGGT	1 cut(s)	1713
BshVI	ATCGAT	1 cut(s)	733
BsiEI	CGRYCG	1 cut(s)	392
BsiHKAI	GWGCWC	1 cut(s)	598
BsiHKCI	CYCGRG	1 cut(s)	359
BslFI	GGGAC	2 cut(s)	340, 2014
BslI	CCNNNNNNNGG	6 cut(s)	283, 298, 514, 540, 555, 1527
BsmAI	GTCTC	4 cut(s)	185, 485, 514, 1481
BsmBI	CGTCTC	1 cut(s)	485
BsmFI	GGGAC	2 cut(s)	340, 2014
Bso31I	GGTCTC	1 cut(s)	185
BsoBI	CYCGRG	1 cut(s)	359
Bsp120I	GGGCCC	1 cut(s)	273
Bsp1286I	GDGCHC	4 cut(s)	277, 429, 598, 1170
Bsp13I	TCCGGA	1 cut(s)	478
Bsp143I	GATC	7 cut(s)	730, 954, 1012, 1177, 1574, 1599, 1684
Bsp1720I	GCTNAGC	1 cut(s)	1455
BspACI	CCGC	8 cut(s)	244, 267, 509, 530, 545, 720, 958, 1849
BspCNI	CTCAG	3 cut(s)	618, 1447, 1757
BspDI	ATCGAT	1 cut(s)	733
BspEI	TCCGGA	1 cut(s)	478
BspFNI	CGCG	3 cut(s)	267, 314, 316
BspHI	TCATGA	1 cut(s)	1111
BspLI	GGNNCC	8 cut(s)	275, 276, 483, 528, 927, 956, 1179, 1203
BspPI	GGATC	7 cut(s)	738, 949, 962, 1007, 1172, 1185, 1692
BspQI	GCTCTTC	2 cut(s)	1638, 1745
BspT107I	GGYRCC	1 cut(s)	526
BspTNI	GGTCTC	1 cut(s)	185
BsrDI	GCAATG	1 cut(s)	1540
BsrFI	RCCGGY	2 cut(s)	503, 1713
BsrI	ACTGG	6 cut(s)	260, 352, 950, 956, 1644, 1730
BssAI	RCCGGY	2 cut(s)	503, 1713
BssHII	GCGCGC	1 cut(s)	314
BssMI	GATC	7 cut(s)	730, 954, 1012, 1177, 1574, 1599, 1684
BssNI	GRCGYC	1 cut(s)	1570
BssT1I	CCWWGG	1 cut(s)	1866
Bst2UI	CCWGG	6 cut(s)	280, 535, 550, 1171, 1293, 1439
Bst4CI	ACNGT	4 cut(s)	456, 496, 1810, 1969
Bst6I	CTCTTC	7 cut(s)	38, 119, 333, 782, 1488, 1638, 1745
BstACI	GRCGYC	1 cut(s)	1570
BstBAI	YACGTR	1 cut(s)	1469
BstC8I	GCNNGC	7 cut(s)	244, 248, 316, 505, 509, 609, 1757
BstDEI	CTNAG	5 cut(s)	626, 1393, 1455, 1478, 1744
BstF5I	GGATG	3 cut(s)	772, 1279, 1857
BstFNI	CGCG	3 cut(s)	267, 314, 316
BstHHI	GCGC	5 cut(s)	252, 267, 316, 318, 1533
BstKTI	GATC	7 cut(s)	733, 957, 1015, 1180, 1577, 1602, 1687
BstMAI	GTCTC	4 cut(s)	185, 485, 514, 1481
BstMBI	GATC	7 cut(s)	730, 954, 1012, 1177, 1574, 1599, 1684
BstMCI	CGRYCG	1 cut(s)	392
BstMWI	GCNNNNNNNGC	4 cut(s)	311, 371, 1451, 1765
BstNI	CCWGG	6 cut(s)	280, 535, 550, 1171, 1293, 1439
BstNSI	RCATGY	2 cut(s)	817, 1253
BstSLI	GKGCMC	2 cut(s)	277, 1170
BstSNI	TACGTA	1 cut(s)	1469
BstUI	CGCG	3 cut(s)	267, 314, 316
BstV1I	GCAGC	2 cut(s)	1432, 1601
BstV2I	GAAGAC	4 cut(s)	240, 1162, 1671, 1932
BstX2I	RGATCY	3 cut(s)	954, 1012, 1177
BstXI	CCANNNNNNTGG	1 cut(s)	1997
BstYI	RGATCY	3 cut(s)	954, 1012, 1177
BstZI	CGGCCG	1 cut(s)	389
Bsu15I	ATCGAT	1 cut(s)	733
BsuTUI	ATCGAT	1 cut(s)	733
BtsCI	GGATG	3 cut(s)	772, 1279, 1857
BtsI	GCAGTG	1 cut(s)	618
BtsIMutI	CAGTG	2 cut(s)	618, 1637
Cac8I	GCNNGC	7 cut(s)	244, 248, 316, 505, 509, 609, 1757
CciI	TCATGA	1 cut(s)	1111
CfoI	GCGC	5 cut(s)	252, 267, 316, 318, 1533
Cfr10I	RCCGGY	2 cut(s)	503, 1713
Cfr13I	GGNCC	8 cut(s)	99, 212, 241, 273, 274, 289, 501, 506
ClaI	ATCGAT	1 cut(s)	733
CseI	GACGC	2 cut(s)	1448, 1559
Csp6I	GTAC	3 cut(s)	949, 1397, 1806
CspAI	ACCGGT	1 cut(s)	1713
CviAII	CATG	5 cut(s)	814, 988, 1112, 1250, 1991
CviQI	GTAC	3 cut(s)	949, 1397, 1806
DdeI	CTNAG	5 cut(s)	626, 1393, 1455, 1478, 1744
DpnI	GATC	7 cut(s)	732, 956, 1014, 1179, 1576, 1601, 1686
DpnII	GATC	7 cut(s)	730, 954, 1012, 1177, 1574, 1599, 1684
EaeI	YGGCCR	2 cut(s)	389, 542
EagI	CGGCCG	1 cut(s)	389
Eam1104I	CTCTTC	7 cut(s)	38, 119, 333, 782, 1488, 1638, 1745
EarI	CTCTTC	7 cut(s)	38, 119, 333, 782, 1488, 1638, 1745
EciI	GGCGGA	1 cut(s)	947
Ecl136II	GAGCTC	1 cut(s)	596
EclXI	CGGCCG	1 cut(s)	389
Eco105I	TACGTA	1 cut(s)	1469
Eco130I	CCWWGG	1 cut(s)	1866
Eco147I	AGGCCT	1 cut(s)	374
Eco24I	GRGCYC	3 cut(s)	277, 429, 598
Eco31I	GGTCTC	1 cut(s)	185
Eco47I	GGWCC	2 cut(s)	99, 289
Eco52I	CGGCCG	1 cut(s)	389
Eco53kI	GAGCTC	1 cut(s)	596
Eco57I	CTGAAG	1 cut(s)	148
Eco88I	CYCGRG	1 cut(s)	359
EcoICRI	GAGCTC	1 cut(s)	596
EcoO109I	RGGNCCY	2 cut(s)	274, 289
EcoRII	CCWGG	6 cut(s)	278, 533, 548, 1169, 1291, 1437
EcoT14I	CCWWGG	1 cut(s)	1866
EcoT38I	GRGCYC	3 cut(s)	277, 429, 598
ErhI	CCWWGG	1 cut(s)	1866
Esp3I	CGTCTC	1 cut(s)	485
FaeI	CATG	5 cut(s)	817, 991, 1115, 1253, 1994
FalI	AAGNNNNNCTT	4 cut(s)	1376, 1408, 1579, 1611
FaqI	GGGAC	2 cut(s)	340, 2014
FatI	CATG	5 cut(s)	813, 987, 1111, 1249, 1990
FauI	CCCGC	2 cut(s)	251, 516
FauNDI	CATATG	1 cut(s)	1828
FbaI	TGATCA	1 cut(s)	1599
FblI	GTMKAC	2 cut(s)	186, 1633
Fnu4HI	GCNGC	6 cut(s)	268, 530, 545, 720, 1446, 1615
FokI	GGATG	3 cut(s)	759, 1286, 1864
FriOI	GRGCYC	3 cut(s)	277, 429, 598
FseI	GGCCGGCC	1 cut(s)	507
Fsp4HI	GCNGC	6 cut(s)	268, 530, 545, 720, 1446, 1615
GlaI	GCGC	5 cut(s)	251, 266, 315, 317, 1532
GluI	GCNGC	6 cut(s)	268, 530, 545, 720, 1446, 1615
GsaI	CCCAGC	2 cut(s)	274, 1987
GsuI	CTGGAG	4 cut(s)	185, 335, 599, 1460
HgaI	GACGC	2 cut(s)	1448, 1559
HhaI	GCGC	5 cut(s)	252, 267, 316, 318, 1533
Hin1I	GRCGYC	1 cut(s)	1570
Hin1II	CATG	5 cut(s)	817, 991, 1115, 1253, 1994
Hin6I	GCGC	5 cut(s)	250, 265, 314, 316, 1531
HinP1I	GCGC	5 cut(s)	250, 265, 314, 316, 1531
HincII	GTYRAC	2 cut(s)	187, 1326
HindII	GTYRAC	2 cut(s)	187, 1326
HindIII	AAGCTT	2 cut(s)	1374, 1593
HinfI	GANTC	3 cut(s)	746, 1408, 2006
HpaI	GTTAAC	1 cut(s)	1326
HphI	GGTGA	7 cut(s)	14, 28, 115, 286, 529, 1211, 1925
Hpy166II	GTNNAC	4 cut(s)	187, 898, 1326, 1634
Hpy188I	TCNGA	8 cut(s)	172, 905, 1059, 1321, 1413, 1604, 1747, 2023
Hpy188III	TCNNGA	7 cut(s)	202, 379, 460, 479, 1112, 1130, 1957
Hpy8I	GTNNAC	4 cut(s)	187, 898, 1326, 1634
Hpy99I	CGWCG	6 cut(s)	176, 188, 191, 1575, 1937, 1940
HpyCH4III	ACNGT	4 cut(s)	456, 496, 1810, 1969
HpyCH4IV	ACGT	2 cut(s)	1071, 1468
HpyCH4V	TGCA	4 cut(s)	4, 607, 1839, 1855
HpyF10VI	GCNNNNNNNGC	4 cut(s)	311, 371, 1451, 1765
HpyF3I	CTNAG	5 cut(s)	626, 1393, 1455, 1478, 1744
HpySE526I	ACGT	2 cut(s)	1071, 1468
Hsp92I	GRCGYC	1 cut(s)	1570
Hsp92II	CATG	5 cut(s)	817, 991, 1115, 1253, 1994
HspAI	GCGC	5 cut(s)	250, 265, 314, 316, 1531
Kpn2I	TCCGGA	1 cut(s)	478
KroI	GCCGGC	1 cut(s)	503
KroNI	GCCGGC	1 cut(s)	505
Ksp22I	TGATCA	1 cut(s)	1599
KspAI	GTTAAC	1 cut(s)	1326
Kzo9I	GATC	7 cut(s)	730, 954, 1012, 1177, 1574, 1599, 1684
LguI	GCTCTTC	2 cut(s)	1638, 1745
LmnI	GCTCC	6 cut(s)	173, 390, 481, 574, 593, 887
Lsp1109I	GCAGC	2 cut(s)	1432, 1601
LweI	GCATC	4 cut(s)	372, 1765, 1842, 1848
MaeII	ACGT	2 cut(s)	1071, 1468
MaeIII	GTNAC	5 cut(s)	395, 862, 1469, 1516, 1913
MalI	GATC	7 cut(s)	732, 956, 1014, 1179, 1576, 1601, 1686
MboI	GATC	7 cut(s)	730, 954, 1012, 1177, 1574, 1599, 1684
MfeI	CAATTG	1 cut(s)	1035
MflI	RGATCY	3 cut(s)	954, 1012, 1177
MhlI	GDGCHC	4 cut(s)	277, 429, 598, 1170
MluCI	AATT	6 cut(s)	26, 996, 1035, 1040, 1136, 2016
MlyI	GAGTC	1 cut(s)	755
MmeI	TCCRAC	3 cut(s)	195, 468, 1777
MroI	TCCGGA	1 cut(s)	478
MroNI	GCCGGC	1 cut(s)	503
MroXI	GAANNNNTTC	1 cut(s)	455
MseI	TTAA	6 cut(s)	465, 1080, 1325, 1425, 1995, 2044
MslI	CAYNNNNRTG	3 cut(s)	1113, 1224, 1995
MspA1I	CMGCKG	2 cut(s)	511, 1849
MunI	CAATTG	1 cut(s)	1035
MvaI	CCWGG	6 cut(s)	280, 535, 550, 1171, 1293, 1439
MvnI	CGCG	3 cut(s)	267, 314, 316
MwoI	GCNNNNNNNGC	4 cut(s)	311, 371, 1451, 1765
NaeI	GCCGGC	1 cut(s)	505
NciI	CCSGG	5 cut(s)	299, 777, 840, 1650, 1697
NdeI	CATATG	1 cut(s)	1828
NdeII	GATC	7 cut(s)	730, 954, 1012, 1177, 1574, 1599, 1684
NgoMIV	GCCGGC	1 cut(s)	503
NlaIII	CATG	5 cut(s)	817, 991, 1115, 1253, 1994
NlaIV	GGNNCC	8 cut(s)	275, 276, 483, 528, 927, 956, 1179, 1203
NmeAIII	GCCGAG	1 cut(s)	417
NmuCI	GTSAC	2 cut(s)	862, 1913
NspI	RCATGY	2 cut(s)	817, 1253
PagI	TCATGA	1 cut(s)	1111
PasI	CCCWGGG	3 cut(s)	279, 534, 549
PauI	GCGCGC	1 cut(s)	314
PceI	AGGCCT	1 cut(s)	374
PciI	ACATGT	1 cut(s)	1249
PciSI	GCTCTTC	2 cut(s)	1638, 1745
PcsI	WCGNNNNNNNCGW	2 cut(s)	180, 1935
PdiI	GCCGGC	1 cut(s)	505
PdmI	GAANNNNTTC	1 cut(s)	455
PfeI	GAWTC	2 cut(s)	1408, 2006
PflMI	CCANNNNNTGG	2 cut(s)	540, 555
PfoI	TCCNGGA	1 cut(s)	775
PinAI	ACCGGT	1 cut(s)	1713
PkrI	GCNGC	6 cut(s)	269, 531, 546, 721, 1447, 1616
PleI	GAGTC	1 cut(s)	754
PpsI	GAGTC	1 cut(s)	754
Ppu21I	YACGTR	1 cut(s)	1469
PpuMI	RGGWCCY	1 cut(s)	289
PscI	ACATGT	1 cut(s)	1249
PsiI	TTATAA	2 cut(s)	753, 1383
Psp124BI	GAGCTC	1 cut(s)	598
Psp5II	RGGWCCY	1 cut(s)	289
Psp6I	CCWGG	6 cut(s)	278, 533, 548, 1169, 1291, 1437
PspFI	CCCAGC	2 cut(s)	270, 1983
PspGI	CCWGG	6 cut(s)	278, 533, 548, 1169, 1291, 1437
PspN4I	GGNNCC	8 cut(s)	275, 276, 483, 528, 927, 956, 1179, 1203
PspOMI	GGGCCC	1 cut(s)	273
PspPI	GGNCC	8 cut(s)	99, 212, 241, 273, 274, 289, 501, 506
PspPPI	RGGWCCY	1 cut(s)	289
PsuI	RGATCY	3 cut(s)	954, 1012, 1177
PteI	GCGCGC	1 cut(s)	314
RigI	GGCCGGCC	1 cut(s)	507
RsaI	GTAC	3 cut(s)	950, 1398, 1807
RsaNI	GTAC	3 cut(s)	949, 1397, 1806
RseI	CAYNNNNRTG	3 cut(s)	1113, 1224, 1995
SacI	GAGCTC	1 cut(s)	598
SalI	GTCGAC	1 cut(s)	185
SapI	GCTCTTC	2 cut(s)	1638, 1745
SaqAI	TTAA	6 cut(s)	465, 1080, 1325, 1425, 1995, 2044
SatI	GCNGC	6 cut(s)	268, 530, 545, 720, 1446, 1615
Sau3AI	GATC	7 cut(s)	730, 954, 1012, 1177, 1574, 1599, 1684
Sau96I	GGNCC	8 cut(s)	99, 212, 241, 273, 274, 289, 501, 506
SchI	GAGTC	1 cut(s)	755
SduI	GDGCHC	4 cut(s)	277, 429, 598, 1170
SfaNI	GCATC	4 cut(s)	372, 1765, 1842, 1848
SfiI	GGCCNNNNNGGCC	1 cut(s)	371
SgrDI	CGTCGACG	1 cut(s)	185
SinI	GGWCC	2 cut(s)	99, 289
SmiMI	CAYNNNNRTG	3 cut(s)	1113, 1224, 1995
SnaBI	TACGTA	1 cut(s)	1469
Sse9I	AATT	6 cut(s)	26, 996, 1035, 1040, 1136, 2016
SseBI	AGGCCT	1 cut(s)	374
SsiI	CCGC	8 cut(s)	244, 267, 509, 530, 545, 720, 958, 1849
SspI	AATATT	3 cut(s)	475, 1104, 1367
SstI	GAGCTC	1 cut(s)	598
StuI	AGGCCT	1 cut(s)	374
StyI	CCWWGG	1 cut(s)	1866
TaaI	ACNGT	4 cut(s)	456, 496, 1810, 1969
TaiI	ACGT	2 cut(s)	1074, 1471
TaqI	TCGA	6 cut(s)	186, 261, 369, 459, 733, 1573
TasI	AATT	6 cut(s)	26, 996, 1035, 1040, 1136, 2016
TauI	GCSGC	4 cut(s)	270, 532, 547, 722
TfiI	GAWTC	2 cut(s)	1408, 2006
Tru1I	TTAA	6 cut(s)	465, 1080, 1325, 1425, 1995, 2044
Tru9I	TTAA	6 cut(s)	465, 1080, 1325, 1425, 1995, 2044
TscAI	CASTG	2 cut(s)	618, 1644
TseFI	GTSAC	2 cut(s)	862, 1913
TseI	GCWGC	2 cut(s)	1445, 1614
Tsp45I	GTSAC	2 cut(s)	862, 1913
TspDTI	ATGAA	8 cut(s)	834, 1097, 1131, 1149, 1362, 1833, 1938, 1977
TspGWI	ACGGA	3 cut(s)	446, 816, 1349
TspRI	CASTG	2 cut(s)	618, 1644
Van91I	CCANNNNNTGG	2 cut(s)	540, 555
VpaK11BI	GGWCC	2 cut(s)	99, 289
XapI	RAATTY	1 cut(s)	996
XceI	RCATGY	2 cut(s)	817, 1253
XmiI	GTMKAC	2 cut(s)	186, 1633
XmnI	GAANNNNTTC	1 cut(s)	455

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.