Ribosomal protein S1-like RNA-binding domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G48500 AT3G48500 |
| fragaria_vesca | FvH4_5g07670 FvH4_5g07670 FvH4_5g07670 |
| malus_domestica | MD14G1162400.v1.1 |
| prunus_persica | Prupe.5G155500_v2.0.a1 |
| pyrus_communis | pycom14g13530 |
| rosa_chinensis | RchiOBHm_Chr1g0380381 RchiOBHm_Chr7g0190801 |
| rosa_laevigata | RLG00000004495 RLG00000004556 RLG00000026308 |
| rosa_multiflora | Rmu_sc0002819.1_g000003 Rmu_sc0003249.1_g000020 |
| rosa_roxburghii | Rroxscaffold_3G00264290 Rroxscaffold_4G00279440 |
| rosa_rugosa | Rorug04G0085500 Rorug06G0507200 |
| rosa_samantha | Rh1CG414500 Rh4AG090600 Rh4BG147500 Rh4CG098900 Rh7AG113800 Rh7BG116400 Rh7CG119100 Rh7DG117700 |
| rosa_wichuraiana | Rw1G038700 Rw7G009930 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 405 |
| AccI | GTMKAC | 1 cut(s) | 394 |
| AciI | CCGC | 2 cut(s) | 186, 422 |
| AcyI | GRCGYC | 1 cut(s) | 331 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 288 |
| AgsI | TTSAA | 1 cut(s) | 589 |
| AjnI | CCWGG | 3 cut(s) | 145, 201, 409 |
| AluBI | AGCT | 5 cut(s) | 234, 356, 386, 432, 582 |
| AluI | AGCT | 5 cut(s) | 234, 356, 386, 432, 582 |
| ApeKI | GCWGC | 2 cut(s) | 209, 234 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 419, 451, 554, 586 |
| AspLEI | GCGC | 1 cut(s) | 294 |
| AspS9I | GGNCC | 1 cut(s) | 445 |
| AsuHPI | GGTGA | 1 cut(s) | 271 |
| AvaII | GGWCC | 1 cut(s) | 445 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 53, 86 |
| BauI | CACGAG | 1 cut(s) | 618 |
| BbsI | GAAGAC | 1 cut(s) | 432 |
| BbvI | GCAGC | 2 cut(s) | 196, 221 |
| BccI | CCATC | 1 cut(s) | 298 |
| BciT130I | CCWGG | 3 cut(s) | 147, 203, 411 |
| BfuAI | ACCTGC | 1 cut(s) | 405 |
| BglII | AGATCT | 1 cut(s) | 36 |
| BisI | GCNGC | 2 cut(s) | 210, 235 |
| BlpI | GCTNAGC | 1 cut(s) | 219 |
| BlsI | GCNGC | 2 cut(s) | 211, 236 |
| Bme1390I | CCNGG | 3 cut(s) | 147, 203, 411 |
| Bme18I | GGWCC | 1 cut(s) | 445 |
| BmgT120I | GGNCC | 1 cut(s) | 445 |
| BmrFI | CCNGG | 3 cut(s) | 147, 203, 411 |
| BmsI | GCATC | 2 cut(s) | 483, 489 |
| BpiI | GAAGAC | 1 cut(s) | 432 |
| BpmI | CTGGAG | 1 cut(s) | 224 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 219 |
| BsaHI | GRCGYC | 1 cut(s) | 331 |
| BsaJI | CCNNGG | 1 cut(s) | 507 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 69, 99, 623, 653 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 288 |
| Bse1I | ACTGG | 1 cut(s) | 494 |
| BseBI | CCWGG | 3 cut(s) | 147, 203, 411 |
| BseDI | CCNNGG | 1 cut(s) | 507 |
| BseGI | GGATG | 2 cut(s) | 313, 498 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 288 |
| BseMII | CTCAG | 1 cut(s) | 210 |
| BseNI | ACTGG | 1 cut(s) | 494 |
| BseRI | GAGGAG | 1 cut(s) | 276 |
| BseXI | GCAGC | 2 cut(s) | 196, 221 |
| BseYI | CCCAGC | 1 cut(s) | 612 |
| BslFI | GGGAC | 1 cut(s) | 644 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 288 |
| BsmFI | GGGAC | 1 cut(s) | 644 |
| Bsp143I | GATC | 4 cut(s) | 36, 228, 335, 360 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 219 |
| BspACI | CCGC | 2 cut(s) | 186, 422 |
| BspCNI | CTCAG | 1 cut(s) | 211 |
| BspMI | ACCTGC | 1 cut(s) | 405 |
| BspQI | GCTCTTC | 1 cut(s) | 399 |
| BsrI | ACTGG | 1 cut(s) | 494 |
| BssECI | CCNNGG | 1 cut(s) | 507 |
| BssMI | GATC | 4 cut(s) | 36, 228, 335, 360 |
| BssNI | GRCGYC | 1 cut(s) | 331 |
| BssSI | CACGAG | 1 cut(s) | 618 |
| BssT1I | CCWWGG | 1 cut(s) | 507 |
| Bst2BI | CACGAG | 1 cut(s) | 618 |
| Bst2UI | CCWGG | 3 cut(s) | 147, 203, 411 |
| Bst4CI | ACNGT | 3 cut(s) | 16, 476, 598 |
| Bst6I | CTCTTC | 1 cut(s) | 399 |
| BstACI | GRCGYC | 1 cut(s) | 331 |
| BstDEI | CTNAG | 1 cut(s) | 219 |
| BstF5I | GGATG | 2 cut(s) | 313, 498 |
| BstHHI | GCGC | 1 cut(s) | 294 |
| BstKTI | GATC | 4 cut(s) | 39, 231, 338, 363 |
| BstMBI | GATC | 4 cut(s) | 36, 228, 335, 360 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 215 |
| BstNI | CCWGG | 3 cut(s) | 147, 203, 411 |
| BstNSI | RCATGY | 1 cut(s) | 107 |
| BstSCI | CCNGG | 3 cut(s) | 145, 201, 409 |
| BstV1I | GCAGC | 2 cut(s) | 196, 221 |
| BstV2I | GAAGAC | 1 cut(s) | 432 |
| BstX2I | RGATCY | 1 cut(s) | 36 |
| BstYI | RGATCY | 1 cut(s) | 36 |
| BtsCI | GGATG | 2 cut(s) | 313, 498 |
| BtsIMutI | CAGTG | 2 cut(s) | 21, 487 |
| BveI | ACCTGC | 1 cut(s) | 405 |
| CfoI | GCGC | 1 cut(s) | 294 |
| Cfr13I | GGNCC | 1 cut(s) | 445 |
| CseI | GACGC | 2 cut(s) | 212, 320 |
| CviAII | CATG | 1 cut(s) | 104 |
| DdeI | CTNAG | 1 cut(s) | 219 |
| DpnI | GATC | 4 cut(s) | 38, 230, 337, 362 |
| DpnII | GATC | 4 cut(s) | 36, 228, 335, 360 |
| DraI | TTTAAA | 1 cut(s) | 126 |
| Eam1104I | CTCTTC | 1 cut(s) | 399 |
| EarI | CTCTTC | 1 cut(s) | 399 |
| Eco130I | CCWWGG | 1 cut(s) | 507 |
| Eco47I | GGWCC | 1 cut(s) | 445 |
| EcoRII | CCWGG | 3 cut(s) | 145, 201, 409 |
| EcoT14I | CCWWGG | 1 cut(s) | 507 |
| EcoT22I | ATGCAT | 1 cut(s) | 105 |
| ErhI | CCWWGG | 1 cut(s) | 507 |
| FaeI | CATG | 1 cut(s) | 107 |
| FaqI | GGGAC | 1 cut(s) | 644 |
| FatI | CATG | 1 cut(s) | 103 |
| FblI | GTMKAC | 1 cut(s) | 394 |
| Fnu4HI | GCNGC | 2 cut(s) | 210, 235 |
| FokI | GGATG | 2 cut(s) | 320, 505 |
| Fsp4HI | GCNGC | 2 cut(s) | 210, 235 |
| GlaI | GCGC | 1 cut(s) | 293 |
| GluI | GCNGC | 2 cut(s) | 210, 235 |
| GsaI | CCCAGC | 1 cut(s) | 616 |
| GsuI | CTGGAG | 1 cut(s) | 224 |
| HgaI | GACGC | 2 cut(s) | 212, 320 |
| HhaI | GCGC | 1 cut(s) | 294 |
| Hin1I | GRCGYC | 1 cut(s) | 331 |
| Hin1II | CATG | 1 cut(s) | 107 |
| Hin6I | GCGC | 1 cut(s) | 292 |
| HinP1I | GCGC | 1 cut(s) | 292 |
| HindIII | AAGCTT | 1 cut(s) | 354 |
| HphI | GGTGA | 1 cut(s) | 271 |
| Hpy166II | GTNNAC | 2 cut(s) | 88, 395 |
| Hpy188I | TCNGA | 3 cut(s) | 95, 176, 228 |
| Hpy188III | TCNNGA | 1 cut(s) | 586 |
| Hpy8I | GTNNAC | 2 cut(s) | 88, 395 |
| Hpy99I | CGWCG | 1 cut(s) | 336 |
| HpyAV | CCTTC | 3 cut(s) | 38, 341, 436 |
| HpyCH4III | ACNGT | 3 cut(s) | 16, 476, 598 |
| HpyCH4V | TGCA | 4 cut(s) | 34, 103, 480, 496 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 215 |
| HpyF3I | CTNAG | 1 cut(s) | 219 |
| Hsp92I | GRCGYC | 1 cut(s) | 331 |
| Hsp92II | CATG | 1 cut(s) | 107 |
| HspAI | GCGC | 1 cut(s) | 292 |
| Kzo9I | GATC | 4 cut(s) | 36, 228, 335, 360 |
| LguI | GCTCTTC | 1 cut(s) | 399 |
| LmnI | GCTCC | 1 cut(s) | 77 |
| Lsp1109I | GCAGC | 2 cut(s) | 196, 221 |
| LweI | GCATC | 2 cut(s) | 483, 489 |
| MaeIII | GTNAC | 2 cut(s) | 10, 52 |
| MalI | GATC | 4 cut(s) | 38, 230, 337, 362 |
| MboI | GATC | 4 cut(s) | 36, 228, 335, 360 |
| MboII | GAAGA | 2 cut(s) | 416, 437 |
| MflI | RGATCY | 1 cut(s) | 36 |
| MluCI | AATT | 1 cut(s) | 646 |
| MnlI | CCTC | 8 cut(s) | 89, 130, 199, 254, 259, 282, 337, 627 |
| Mph1103I | ATGCAT | 1 cut(s) | 105 |
| MseI | TTAA | 3 cut(s) | 125, 324, 624 |
| MslI | CAYNNNNRTG | 1 cut(s) | 284 |
| MspA1I | CMGCKG | 1 cut(s) | 234 |
| MspR9I | CCNGG | 3 cut(s) | 147, 203, 411 |
| MvaI | CCWGG | 3 cut(s) | 147, 203, 411 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 215 |
| NdeII | GATC | 4 cut(s) | 36, 228, 335, 360 |
| NlaIII | CATG | 1 cut(s) | 107 |
| NmuCI | GTSAC | 1 cut(s) | 52 |
| NsiI | ATGCAT | 1 cut(s) | 105 |
| NspI | RCATGY | 1 cut(s) | 107 |
| PciSI | GCTCTTC | 1 cut(s) | 399 |
| PfoI | TCCNGGA | 1 cut(s) | 145 |
| PkrI | GCNGC | 2 cut(s) | 211, 236 |
| Psp6I | CCWGG | 3 cut(s) | 145, 201, 409 |
| PspFI | CCCAGC | 1 cut(s) | 612 |
| PspGI | CCWGG | 3 cut(s) | 145, 201, 409 |
| PspPI | GGNCC | 1 cut(s) | 445 |
| PsuI | RGATCY | 1 cut(s) | 36 |
| PvuII | CAGCTG | 1 cut(s) | 234 |
| RseI | CAYNNNNRTG | 1 cut(s) | 284 |
| SapI | GCTCTTC | 1 cut(s) | 399 |
| SaqAI | TTAA | 3 cut(s) | 125, 324, 624 |
| SatI | GCNGC | 2 cut(s) | 210, 235 |
| Sau3AI | GATC | 4 cut(s) | 36, 228, 335, 360 |
| Sau96I | GGNCC | 1 cut(s) | 445 |
| ScrFI | CCNGG | 3 cut(s) | 147, 203, 411 |
| SetI | ASST | 8 cut(s) | 100, 204, 236, 358, 388, 419, 434, 584 |
| SfaNI | GCATC | 2 cut(s) | 483, 489 |
| SinI | GGWCC | 1 cut(s) | 445 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 284 |
| Sse9I | AATT | 1 cut(s) | 646 |
| SsiI | CCGC | 2 cut(s) | 186, 422 |
| SspI | AATATT | 1 cut(s) | 298 |
| StyD4I | CCNGG | 3 cut(s) | 145, 201, 409 |
| StyI | CCWWGG | 1 cut(s) | 507 |
| TaaI | ACNGT | 3 cut(s) | 16, 476, 598 |
| TaqI | TCGA | 2 cut(s) | 334, 483 |
| TasI | AATT | 1 cut(s) | 646 |
| Tru1I | TTAA | 3 cut(s) | 125, 324, 624 |
| Tru9I | TTAA | 3 cut(s) | 125, 324, 624 |
| TscAI | CASTG | 2 cut(s) | 21, 494 |
| TseFI | GTSAC | 1 cut(s) | 52 |
| TseI | GCWGC | 2 cut(s) | 209, 234 |
| Tsp45I | GTSAC | 1 cut(s) | 52 |
| TspDTI | ATGAA | 4 cut(s) | 171, 266, 324, 606 |
| TspRI | CASTG | 2 cut(s) | 21, 494 |
| VpaK11BI | GGWCC | 1 cut(s) | 445 |
| XceI | RCATGY | 1 cut(s) | 107 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 386 |
| XmiI | GTMKAC | 1 cut(s) | 394 |
| Zsp2I | ATGCAT | 1 cut(s) | 105 |