Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0005441

Physical Location & Seq

Genomic Coordinates Reverse (-)

13903742 .. 13909011

Gene Structure 5270 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G155500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2022 bp

ATGCAAGTCCTCCAAACCCCTCACCAATTCTTCACATTCCCTAAAACCCTAAACCCTAACCCCAAACCCCACCCCAAGCAGCTCCACCACCACCTCCAATGGCGTCCCCTTAGCTTCTCCAAACCCAAGGCCCTTAGCTCAGACGAGTTCCCAGTCGACGAGACCTTCCTCGAGAACTTCGGCCCAAAAGACAAAGAAACCGAAGACGAAGCCCGAAAGCGCAACTGGGTCGAGCGCGGGTGGGCCCCATGGGAGGAGGTCCTCACGCCCGAGGCCGATTTCGCGCGAAAAAGCTTGAACGAAGGCGAAGAAGTCGCTCTCCAATCCCCAGAGGCCATCGAAGCCTTCAAAATGCTCAGACCGAGTTACCGCAAGAAGAAAATGGAGGAAATGGGCCTAACCGAAGACGACTATTATCGCAAACAGTTCGAGATCAAAGGCAACATACCGGAGCCGTTGAAGACGGTTTGGGCCGCGCCGCTGGTCGTCCGACACGTGCCACCGAGGGATTGGCCGCCGAGGGATTGGGAGGTTGATAAGAAGGAGCTAGAGTATATAAGAGAAGCGCATAAGTTGCAGGCAGTGAGGGTTGGATTGGAGGAATTGGAGAGAGAGGCGACGACGGAGACTAATGATTTGTGTTTGGATAGGTATAAGGTGTTCTTGAAGCAGTACAAGGAATGGGTCGCTGCGAATAAGGATCGATTGGAAGAGGAGTCGTATAAGTATGACCAAGATTACCATCCGGGTAGGAGGAAGAGAGGCAAGGACTACAAAGAGGGCATGTATGAACTTCCATTTTATTATCCCGGACAGATTTGTGAAGGAAAAGTGACAGCTATACATCTATATCAAGGAGCATTTGTGGACATTGGAGGTGTATATGATGGGTGGGTCCCTATAAAAAATAATGATTGGTACTGGATCCGTCATCACATAAAAGTTGGTATGCCTGTCATTGTTGAAATTCTGGCAAAGCGAGATCCGTACCGTTTTCGGTTTCCTATTGAAATGCGTTTTGTCTATCCTAACATAGACCATTTGATATTCAACAGATTTGACTTTTCGCCAATATTTCATCGCGATGAGGATACTAATCCAGATGAATTGCGGCGTGATTGTGGAAGACCTCCTGTACCCAGGAAGGATCCAAAAGACAAACCAGTAGAGGAACCTTTATTGTCAAATCACCCTTATGTTGATAAGTTGTGGCAGATACATGTTGCTGAACAGATGATTTTGAATGATTTGGAGGCTAATCCGGAGAAATACAAAGGCAAAAAACTATCAGAGTTGACTGATACTGAAGAGTTCAATGAAGAAAATAGTGTTGAATATACAAAAGCCTATTATAAGAAAACCTTGATACCAAAAGTGATTCTGAAAACTAGCGTTAAAGAACTTGACTTGGAGGCTGCCTTTGCTGAGCGTGAGCTACGCAACAGACTAAGAAGGGAAGCAAAAGAGAGAGGAGAGGAATACAGAGTTACTAATATGAGACGTAATGATGAAATGGATGAGTATGACTTTTTACATTGGCGCAGATCCGTTGAGGAAAGAGAAGCTCTGATCAGAGACATAAGCTGCCGCAAAGCTCTTGGTCTACCACTTGAAGAGCCAGGAAGGTATGTGGAATCCAGTTACTTTGGGAAGGATCAATATGACCCGGCAAACCCTCTGTATCGGTATGACTACTGGGGAGAACCAAAGAACTCAGAGAAGAGCAAGCAAGAGCGGCTGACAGATGCTCATAACAAAGCCATTGTGGGAAAGAGCACTGTTTGGTATGAAATGTCATATGACGATTGCATCAAGCAACGAATGCAAAGAGAAGCTAAGGGAATAAAACCAAGAGAAATCGATGAAGAAGATTCAAGCGGAGAAGACGATGATGACGACGATGACTTTGATTTCAGCTTCTTAAATGAAACCAACGTTGATTTGTCGGACCAGCCTCATGTTAATGGCACCGAATCTTCAAGAATTTCGGATGAAGGCATGTTTGAGGAAGAAGGTCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000229 GO:0005575 GO:0005622 GO:0005623 GO:0005694 GO:0005737 GO:0005829 GO:0009295 GO:0009507 GO:0009508 GO:0009532 GO:0009536 GO:0009570 GO:0042646 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

674

Amino Acids

80.05

Weight (kDa)

5.24

Isoelectric Point (pI)

46.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005441)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G48500 AT3G48500
fragaria_vesca	FvH4_5g07670 FvH4_5g07670 FvH4_5g07670
malus_domestica	MD14G1162400.v1.1
prunus_persica	Prupe.5G155500_v2.0.a1
pyrus_communis	pycom14g13530
rosa_chinensis	RchiOBHm_Chr1g0380381 RchiOBHm_Chr7g0190801
rosa_laevigata	RLG00000004495 RLG00000004556 RLG00000026308
rosa_multiflora	Rmu_sc0002819.1_g000003 Rmu_sc0003249.1_g000020
rosa_roxburghii	Rroxscaffold_3G00264290 Rroxscaffold_4G00279440
rosa_rugosa	Rorug04G0085500 Rorug06G0507200
rosa_samantha	Rh1CG414500 Rh4AG090600 Rh4BG147500 Rh4CG098900 Rh7AG113800 Rh7BG116400 Rh7CG119100 Rh7DG117700
rosa_wichuraiana	Rw1G038700 Rw7G009930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1353
AccB1I	GGYRCC	1 cut(s)	1967
AccBSI	CCGCTC	1 cut(s)	1735
AccI	GTMKAC	2 cut(s)	156, 1603
AccII	CGCG	5 cut(s)	237, 284, 286, 476, 1083
AccIII	TCCGGA	1 cut(s)	1261
AciI	CCGC	9 cut(s)	237, 370, 474, 479, 515, 1111, 1588, 1735, 1878
AclI	AACGTT	1 cut(s)	1935
AclWI	GGATC	8 cut(s)	708, 919, 932, 977, 1142, 1155, 1539, 1662
AcoI	YGGCCR	1 cut(s)	512
AcsI	RAATTY	2 cut(s)	966, 1983
AcuI	CTGAAG	1 cut(s)	1326
AcvI	CACGTG	1 cut(s)	496
AcyI	GRCGYC	1 cut(s)	103
AfaI	GTAC	4 cut(s)	674, 920, 989, 1137
AfiI	CCNNNNNNNGG	1 cut(s)	253
AflIII	ACRYGT	2 cut(s)	493, 1219
AjnI	CCWGG	2 cut(s)	1139, 1618
Alw21I	GWGCWC	1 cut(s)	1778
Alw26I	GTCTC	4 cut(s)	155, 620, 1492, 1569
AlwI	GGATC	8 cut(s)	708, 919, 932, 977, 1142, 1155, 1539, 1662
Ama87I	CYCGRG	2 cut(s)	170, 269
Aor13HI	TCCGGA	1 cut(s)	1261
AoxI	GGCC	8 cut(s)	129, 181, 243, 273, 333, 394, 471, 512
ApaI	GGGCCC	1 cut(s)	247
ApeKI	GCWGC	4 cut(s)	79, 689, 1415, 1584
ApoI	RAATTY	2 cut(s)	966, 1983
ArsI	GACNNNNNNTTYG	4 cut(s)	619, 651, 1889, 1921
AspLEI	GCGC	6 cut(s)	222, 237, 286, 478, 568, 1542
AspS9I	GGNCC	9 cut(s)	130, 182, 243, 244, 259, 394, 471, 895, 1948
AsuC2I	CCSGG	3 cut(s)	747, 810, 1667
AsuHPI	GGTGA	2 cut(s)	14, 1181
AvaI	CYCGRG	2 cut(s)	170, 269
AvaII	GGWCC	3 cut(s)	259, 895, 1948
BaeGI	GKGCMC	1 cut(s)	247
BamHI	GGATCC	2 cut(s)	924, 1147
BanI	GGYRCC	1 cut(s)	1967
BanII	GRGCYC	1 cut(s)	247
BbrPI	CACGTG	1 cut(s)	496
BbsI	GAAGAC	5 cut(s)	210, 411, 467, 1132, 1890
Bbv12I	GWGCWC	1 cut(s)	1778
BbvI	GCAGC	4 cut(s)	91, 676, 1402, 1571
BccI	CCATC	3 cut(s)	344, 750, 881
BceAI	ACGGC	1 cut(s)	439
BcgI	CGANNNNNNTGC	4 cut(s)	211, 245, 409, 443
BciT130I	CCWGG	2 cut(s)	1141, 1620
BciVI	GTATCC	1 cut(s)	1084
BclI	TGATCA	1 cut(s)	1569
BcnI	CCSGG	3 cut(s)	747, 810, 1667
BcoDI	GTCTC	4 cut(s)	155, 620, 1492, 1569
BfaI	CTAG	2 cut(s)	548, 1389
BfuI	GTATCC	1 cut(s)	1084
BlpI	GCTNAGC	1 cut(s)	1425
Bme1390I	CCNGG	5 cut(s)	747, 810, 1141, 1620, 1667
Bme18I	GGWCC	3 cut(s)	259, 895, 1948
BmeT110I	CYCGRG	2 cut(s)	170, 269
BmgT120I	GGNCC	9 cut(s)	130, 182, 243, 244, 259, 394, 471, 895, 1948
BmiI	GGNNCC	9 cut(s)	245, 246, 453, 896, 897, 926, 1149, 1173, 1969
BmrFI	CCNGG	5 cut(s)	747, 810, 1141, 1620, 1667
BmrI	ACTGGG	3 cut(s)	146, 235, 1705
BmsI	GCATC	2 cut(s)	1735, 1818
BmuI	ACTGGG	3 cut(s)	146, 235, 1705
BpiI	GAAGAC	5 cut(s)	210, 411, 467, 1132, 1890
Bpu10I	CCTNAGC	3 cut(s)	110, 134, 1836
Bpu1102I	GCTNAGC	1 cut(s)	1425
BpuMI	CCSGG	3 cut(s)	747, 810, 1667
Bsa29I	ATCGAT	2 cut(s)	703, 1860
BsaAI	YACGTR	1 cut(s)	496
BsaBI	GATNNNNATC	2 cut(s)	741, 1095
BsaHI	GRCGYC	1 cut(s)	103
BsaI	GGTCTC	1 cut(s)	155
BsaJI	CCNNGG	6 cut(s)	126, 248, 270, 503, 518, 1139
BsaWI	WCCGGW	2 cut(s)	448, 1261
BsaXI	ACNNNNNCTCC	4 cut(s)	536, 566, 849, 879
Bsc4I	CCNNNNNNNGG	1 cut(s)	253
Bse1I	ACTGG	6 cut(s)	152, 230, 926, 1163, 1638, 1700
Bse8I	GATNNNNATC	2 cut(s)	741, 1095
BseAI	TCCGGA	1 cut(s)	1261
BseBI	CCWGG	2 cut(s)	1141, 1620
BseCI	ATCGAT	2 cut(s)	703, 1860
BseDI	CCNNGG	6 cut(s)	126, 248, 270, 503, 518, 1139
BseGI	GGATG	3 cut(s)	742, 1522, 1996
BseJI	GATNNNNATC	2 cut(s)	741, 1095
BseLI	CCNNNNNNNGG	1 cut(s)	253
BseMII	CTCAG	4 cut(s)	153, 370, 1416, 1728
BseNI	ACTGG	6 cut(s)	152, 230, 926, 1163, 1638, 1700
BseRI	GAGGAG	3 cut(s)	269, 728, 1485
BseSI	GKGCMC	1 cut(s)	247
BseXI	GCAGC	4 cut(s)	91, 676, 1402, 1571
Bsh1236I	CGCG	5 cut(s)	237, 284, 286, 476, 1083
BshFI	GGCC	8 cut(s)	131, 183, 245, 275, 335, 396, 473, 514
BshNI	GGYRCC	1 cut(s)	1967
BshVI	ATCGAT	2 cut(s)	703, 1860
BsiHKAI	GWGCWC	1 cut(s)	1778
BsiHKCI	CYCGRG	2 cut(s)	170, 269
BsiSI	CCGG	5 cut(s)	449, 746, 810, 1262, 1667
BslFI	GGGAC	2 cut(s)	90, 881
BslI	CCNNNNNNNGG	1 cut(s)	253
BsmAI	GTCTC	4 cut(s)	155, 620, 1492, 1569
BsmBI	CGTCTC	1 cut(s)	1492
BsmFI	GGGAC	2 cut(s)	90, 881
BsmI	GAATGC	1 cut(s)	1827
BsnI	GGCC	8 cut(s)	131, 183, 245, 275, 335, 396, 473, 514
Bso31I	GGTCTC	1 cut(s)	155
BsoBI	CYCGRG	2 cut(s)	170, 269
Bsp120I	GGGCCC	1 cut(s)	243
Bsp1286I	GDGCHC	2 cut(s)	247, 1778
Bsp13I	TCCGGA	1 cut(s)	1261
Bsp143I	GATC	8 cut(s)	432, 700, 924, 982, 1147, 1544, 1569, 1654
Bsp1720I	GCTNAGC	1 cut(s)	1425
Bsp19I	CCATGG	1 cut(s)	248
Bsp68I	TCGCGA	1 cut(s)	1083
BspACI	CCGC	9 cut(s)	237, 370, 474, 479, 515, 1111, 1588, 1735, 1878
BspANI	GGCC	8 cut(s)	131, 183, 245, 275, 335, 396, 473, 514
BspCNI	CTCAG	4 cut(s)	152, 369, 1417, 1727
BspDI	ATCGAT	2 cut(s)	703, 1860
BspEI	TCCGGA	1 cut(s)	1261
BspFNI	CGCG	5 cut(s)	237, 284, 286, 476, 1083
BspLI	GGNNCC	9 cut(s)	245, 246, 453, 896, 897, 926, 1149, 1173, 1969
BspPI	GGATC	8 cut(s)	708, 919, 932, 977, 1142, 1155, 1539, 1662
BspQI	GCTCTTC	2 cut(s)	1608, 1715
BspT107I	GGYRCC	1 cut(s)	1967
BspTNI	GGTCTC	1 cut(s)	155
BsrBI	CCGCTC	1 cut(s)	1735
BsrI	ACTGG	6 cut(s)	152, 230, 926, 1163, 1638, 1700
BssECI	CCNNGG	6 cut(s)	126, 248, 270, 503, 518, 1139
BssMI	GATC	8 cut(s)	432, 700, 924, 982, 1147, 1544, 1569, 1654
BssNI	GRCGYC	1 cut(s)	103
BssT1I	CCWWGG	2 cut(s)	126, 248
Bst2UI	CCWGG	2 cut(s)	1141, 1620
Bst4CI	ACNGT	4 cut(s)	426, 466, 992, 1780
Bst6I	CTCTTC	5 cut(s)	705, 752, 1302, 1608, 1715
BstACI	GRCGYC	1 cut(s)	103
BstAPI	GCANNNNNTGC	2 cut(s)	574, 1822
BstBAI	YACGTR	1 cut(s)	496
BstC8I	GCNNGC	2 cut(s)	579, 1727
BstDEI	CTNAG	8 cut(s)	110, 134, 139, 356, 1425, 1448, 1714, 1836
BstDSI	CCRYGG	1 cut(s)	248
BstF5I	GGATG	3 cut(s)	742, 1522, 1996
BstFNI	CGCG	5 cut(s)	237, 284, 286, 476, 1083
BstHHI	GCGC	6 cut(s)	222, 237, 286, 478, 568, 1542
BstKTI	GATC	8 cut(s)	435, 703, 927, 985, 1150, 1547, 1572, 1657
BstMAI	GTCTC	4 cut(s)	155, 620, 1492, 1569
BstMBI	GATC	8 cut(s)	432, 700, 924, 982, 1147, 1544, 1569, 1654
BstMWI	GCNNNNNNNGC	6 cut(s)	281, 341, 574, 1421, 1735, 1822
BstNI	CCWGG	2 cut(s)	1141, 1620
BstNSI	RCATGY	3 cut(s)	787, 1223, 2002
BstSCI	CCNGG	5 cut(s)	745, 808, 1139, 1618, 1665
BstSLI	GKGCMC	1 cut(s)	247
BstUI	CGCG	5 cut(s)	237, 284, 286, 476, 1083
BstV1I	GCAGC	4 cut(s)	91, 676, 1402, 1571
BstV2I	GAAGAC	5 cut(s)	210, 411, 467, 1132, 1890
BstX2I	RGATCY	4 cut(s)	924, 982, 1147, 1544
BstYI	RGATCY	4 cut(s)	924, 982, 1147, 1544
Bsu15I	ATCGAT	2 cut(s)	703, 1860
BsuI	GTATCC	1 cut(s)	1084
BsuRI	GGCC	8 cut(s)	131, 183, 245, 275, 335, 396, 473, 514
BsuTUI	ATCGAT	2 cut(s)	703, 1860
BtgI	CCRYGG	1 cut(s)	248
BtgZI	GCGATG	2 cut(s)	1064, 1098
BtsCI	GGATG	3 cut(s)	742, 1522, 1996
BtsI	GCAGTG	1 cut(s)	588
BtsIMutI	CAGTG	2 cut(s)	588, 1776
BtuMI	TCGCGA	1 cut(s)	1083
Cac8I	GCNNGC	2 cut(s)	579, 1727
CfoI	GCGC	6 cut(s)	222, 237, 286, 478, 568, 1542
Cfr13I	GGNCC	9 cut(s)	130, 182, 243, 244, 259, 394, 471, 895, 1948
ClaI	ATCGAT	2 cut(s)	703, 1860
CseI	GACGC	1 cut(s)	92
Csp6I	GTAC	4 cut(s)	673, 919, 988, 1136
CviAII	CATG	5 cut(s)	249, 784, 1220, 1958, 1999
CviQI	GTAC	4 cut(s)	673, 919, 988, 1136
DdeI	CTNAG	8 cut(s)	110, 134, 139, 356, 1425, 1448, 1714, 1836
DpnI	GATC	8 cut(s)	434, 702, 926, 984, 1149, 1546, 1571, 1656
DpnII	GATC	8 cut(s)	432, 700, 924, 982, 1147, 1544, 1569, 1654
EaeI	YGGCCR	1 cut(s)	512
Eam1104I	CTCTTC	5 cut(s)	705, 752, 1302, 1608, 1715
EarI	CTCTTC	5 cut(s)	705, 752, 1302, 1608, 1715
Eco130I	CCWWGG	2 cut(s)	126, 248
Eco24I	GRGCYC	1 cut(s)	247
Eco31I	GGTCTC	1 cut(s)	155
Eco47I	GGWCC	3 cut(s)	259, 895, 1948
Eco57I	CTGAAG	1 cut(s)	1326
Eco72I	CACGTG	1 cut(s)	496
Eco88I	CYCGRG	2 cut(s)	170, 269
EcoO109I	RGGNCCY	4 cut(s)	130, 244, 259, 895
EcoRII	CCWGG	2 cut(s)	1139, 1618
EcoT14I	CCWWGG	2 cut(s)	126, 248
EcoT38I	GRGCYC	1 cut(s)	247
ErhI	CCWWGG	2 cut(s)	126, 248
Esp3I	CGTCTC	1 cut(s)	1492
FaeI	CATG	5 cut(s)	252, 787, 1223, 1961, 2002
FalI	AAGNNNNNCTT	4 cut(s)	647, 679, 1346, 1378
FaqI	GGGAC	2 cut(s)	90, 881
FatI	CATG	5 cut(s)	248, 783, 1219, 1957, 1998
FauI	CCCGC	1 cut(s)	230
FauNDI	CATATG	1 cut(s)	1798
FbaI	TGATCA	1 cut(s)	1569
FblI	GTMKAC	2 cut(s)	156, 1603
FokI	GGATG	3 cut(s)	729, 1529, 2003
FriOI	GRGCYC	1 cut(s)	247
FspBI	CTAG	2 cut(s)	548, 1389
GlaI	GCGC	6 cut(s)	221, 236, 285, 477, 567, 1541
HaeIII	GGCC	8 cut(s)	131, 183, 245, 275, 335, 396, 473, 514
HapII	CCGG	5 cut(s)	449, 746, 810, 1262, 1667
HgaI	GACGC	1 cut(s)	92
HhaI	GCGC	6 cut(s)	222, 237, 286, 478, 568, 1542
Hin1I	GRCGYC	1 cut(s)	103
Hin1II	CATG	5 cut(s)	252, 787, 1223, 1961, 2002
Hin6I	GCGC	6 cut(s)	220, 235, 284, 476, 566, 1540
HinP1I	GCGC	6 cut(s)	220, 235, 284, 476, 566, 1540
HincII	GTYRAC	2 cut(s)	157, 1296
HindII	GTYRAC	2 cut(s)	157, 1296
HindIII	AAGCTT	1 cut(s)	292
HinfI	GANTC	5 cut(s)	716, 1378, 1634, 1871, 1973
HpaII	CCGG	5 cut(s)	449, 746, 810, 1262, 1667
HphI	GGTGA	2 cut(s)	14, 1181
Hpy166II	GTNNAC	4 cut(s)	157, 868, 1296, 1604
Hpy188III	TCNNGA	7 cut(s)	172, 430, 664, 1082, 1100, 1262, 1980
Hpy8I	GTNNAC	4 cut(s)	157, 868, 1296, 1604
Hpy99I	CGWCG	4 cut(s)	161, 622, 625, 1901
HpyCH4III	ACNGT	4 cut(s)	426, 466, 992, 1780
HpyCH4IV	ACGT	3 cut(s)	495, 1501, 1935
HpyCH4V	TGCA	4 cut(s)	4, 577, 1809, 1825
HpyF10VI	GCNNNNNNNGC	6 cut(s)	281, 341, 574, 1421, 1735, 1822
HpyF3I	CTNAG	8 cut(s)	110, 134, 139, 356, 1425, 1448, 1714, 1836
HpySE526I	ACGT	3 cut(s)	495, 1501, 1935
Hsp92I	GRCGYC	1 cut(s)	103
Hsp92II	CATG	5 cut(s)	252, 787, 1223, 1961, 2002
HspAI	GCGC	6 cut(s)	220, 235, 284, 476, 566, 1540
KflI	GGGWCCC	1 cut(s)	895
Kpn2I	TCCGGA	1 cut(s)	1261
Ksp22I	TGATCA	1 cut(s)	1569
Kzo9I	GATC	8 cut(s)	432, 700, 924, 982, 1147, 1544, 1569, 1654
LguI	GCTCTTC	2 cut(s)	1608, 1715
LmnI	GCTCC	4 cut(s)	87, 451, 544, 857
Lsp1109I	GCAGC	4 cut(s)	91, 676, 1402, 1571
LweI	GCATC	2 cut(s)	1735, 1818
MaeI	CTAG	2 cut(s)	548, 1389
MaeII	ACGT	3 cut(s)	495, 1501, 1935
MaeIII	GTNAC	4 cut(s)	365, 832, 1486, 1640
MalI	GATC	8 cut(s)	434, 702, 926, 984, 1149, 1546, 1571, 1656
MbiI	CCGCTC	1 cut(s)	1735
MboI	GATC	8 cut(s)	432, 700, 924, 982, 1147, 1544, 1569, 1654
MflI	RGATCY	4 cut(s)	924, 982, 1147, 1544
MhlI	GDGCHC	2 cut(s)	247, 1778
MluCI	AATT	5 cut(s)	26, 602, 966, 1106, 1983
MlyI	GAGTC	1 cut(s)	725
MmeI	TCCRAC	3 cut(s)	514, 571, 1926
MroI	TCCGGA	1 cut(s)	1261
MseI	TTAA	3 cut(s)	1395, 1922, 1962
MslI	CAYNNNNRTG	3 cut(s)	1083, 1194, 1962
MspA1I	CMGCKG	1 cut(s)	481
MspI	CCGG	5 cut(s)	449, 746, 810, 1262, 1667
MspR9I	CCNGG	5 cut(s)	747, 810, 1141, 1620, 1667
Mva1269I	GAATGC	1 cut(s)	1827
MvaI	CCWGG	2 cut(s)	1141, 1620
MvnI	CGCG	5 cut(s)	237, 284, 286, 476, 1083
MwoI	GCNNNNNNNGC	6 cut(s)	281, 341, 574, 1421, 1735, 1822
NciI	CCSGG	3 cut(s)	747, 810, 1667
NcoI	CCATGG	1 cut(s)	248
NdeI	CATATG	1 cut(s)	1798
NdeII	GATC	8 cut(s)	432, 700, 924, 982, 1147, 1544, 1569, 1654
NlaIII	CATG	5 cut(s)	252, 787, 1223, 1961, 2002
NlaIV	GGNNCC	9 cut(s)	245, 246, 453, 896, 897, 926, 1149, 1173, 1969
NmeAIII	GCCGAG	1 cut(s)	543
NmuCI	GTSAC	1 cut(s)	832
NruI	TCGCGA	1 cut(s)	1083
NspI	RCATGY	3 cut(s)	787, 1223, 2002
PaeR7I	CTCGAG	1 cut(s)	170
PciI	ACATGT	1 cut(s)	1219
PciSI	GCTCTTC	2 cut(s)	1608, 1715
PcsI	WCGNNNNNNNCGW	2 cut(s)	492, 1893
PctI	GAATGC	1 cut(s)	1827
PfeI	GAWTC	4 cut(s)	1378, 1634, 1871, 1973
PfoI	TCCNGGA	1 cut(s)	808
PleI	GAGTC	1 cut(s)	724
PmaCI	CACGTG	1 cut(s)	496
PmlI	CACGTG	1 cut(s)	496
PpsI	GAGTC	1 cut(s)	724
Ppu21I	YACGTR	1 cut(s)	496
PpuMI	RGGWCCY	2 cut(s)	259, 895
PscI	ACATGT	1 cut(s)	1219
PsiI	TTATAA	1 cut(s)	1353
Psp1406I	AACGTT	1 cut(s)	1935
Psp5II	RGGWCCY	2 cut(s)	259, 895
Psp6I	CCWGG	2 cut(s)	1139, 1618
PspCI	CACGTG	1 cut(s)	496
PspGI	CCWGG	2 cut(s)	1139, 1618
PspN4I	GGNNCC	9 cut(s)	245, 246, 453, 896, 897, 926, 1149, 1173, 1969
PspOMI	GGGCCC	1 cut(s)	243
PspPI	GGNCC	9 cut(s)	130, 182, 243, 244, 259, 394, 471, 895, 1948
PspPPI	RGGWCCY	2 cut(s)	259, 895
PsrI	GAACNNNNNNTAC	2 cut(s)	644, 676
PsuI	RGATCY	4 cut(s)	924, 982, 1147, 1544
RruI	TCGCGA	1 cut(s)	1083
RsaI	GTAC	4 cut(s)	674, 920, 989, 1137
RsaNI	GTAC	4 cut(s)	673, 919, 988, 1136
RseI	CAYNNNNRTG	3 cut(s)	1083, 1194, 1962
SalI	GTCGAC	1 cut(s)	155
SapI	GCTCTTC	2 cut(s)	1608, 1715
SaqAI	TTAA	3 cut(s)	1395, 1922, 1962
Sau3AI	GATC	8 cut(s)	432, 700, 924, 982, 1147, 1544, 1569, 1654
Sau96I	GGNCC	9 cut(s)	130, 182, 243, 244, 259, 394, 471, 895, 1948
SchI	GAGTC	1 cut(s)	725
ScrFI	CCNGG	5 cut(s)	747, 810, 1141, 1620, 1667
SduI	GDGCHC	2 cut(s)	247, 1778
SfaNI	GCATC	2 cut(s)	1735, 1818
Sfr274I	CTCGAG	1 cut(s)	170
SinI	GGWCC	3 cut(s)	259, 895, 1948
SlaI	CTCGAG	1 cut(s)	170
SmiMI	CAYNNNNRTG	3 cut(s)	1083, 1194, 1962
SmlI	CTYRAG	1 cut(s)	170
SmoI	CTYRAG	1 cut(s)	170
Sse9I	AATT	5 cut(s)	26, 602, 966, 1106, 1983
SsiI	CCGC	9 cut(s)	237, 370, 474, 479, 515, 1111, 1588, 1735, 1878
SspI	AATATT	1 cut(s)	1074
SspMI	CTAG	2 cut(s)	548, 1389
StyD4I	CCNGG	5 cut(s)	745, 808, 1139, 1618, 1665
StyI	CCWWGG	2 cut(s)	126, 248
TaaI	ACNGT	4 cut(s)	426, 466, 992, 1780
TaiI	ACGT	3 cut(s)	498, 1504, 1938
TaqI	TCGA	7 cut(s)	156, 171, 231, 339, 429, 703, 1860
TaqII	GACCGA	1 cut(s)	376
TasI	AATT	5 cut(s)	26, 602, 966, 1106, 1983
TatI	WGTACW	1 cut(s)	672
TauI	GCSGC	6 cut(s)	476, 481, 517, 1114, 1590, 1738
TfiI	GAWTC	4 cut(s)	1378, 1634, 1871, 1973
Tru1I	TTAA	3 cut(s)	1395, 1922, 1962
Tru9I	TTAA	3 cut(s)	1395, 1922, 1962
TscAI	CASTG	2 cut(s)	588, 1783
TseFI	GTSAC	1 cut(s)	832
TseI	GCWGC	4 cut(s)	79, 689, 1415, 1584
Tsp45I	GTSAC	1 cut(s)	832
TspDTI	ATGAA	9 cut(s)	804, 1067, 1119, 1332, 1524, 1803, 1878, 1941, 2007
TspGWI	ACGGA	4 cut(s)	638, 917, 975, 1537
TspRI	CASTG	2 cut(s)	588, 1783
VpaK11BI	GGWCC	3 cut(s)	259, 895, 1948
XapI	RAATTY	2 cut(s)	966, 1983
XceI	RCATGY	3 cut(s)	787, 1223, 2002
XcmI	CCANNNNNNNNNTGG	1 cut(s)	507
XhoI	CTCGAG	1 cut(s)	170
XmiI	GTMKAC	2 cut(s)	156, 1603
XspI	CTAG	2 cut(s)	548, 1389

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.