Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0003040

Physical Location & Seq

Genomic Coordinates Forward (+)

14254981 .. 14260905

Gene Structure 5925 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g22940.t9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2409 bp

ATGTATGGGGATTGCCAAGTAATGTCAACCATGGGAGGTGGGAATGTAGTCAACTCTGAAACCTTGTTTTCCTCGCCAATTCAAAACCCTAACTTCAACTTCATGCCTTTCCAGCCTTTCTCTTCCATTGTTCCGAAAGAAGAAAATGGGCTTATGATTAAAGGAAAGGAGGAAATGATGGATAGTGGGTCTGGGAGTGAACATGCTGAAGAAAAGTACTCCGAGCAAGAAACCGAAGAACAACAGCAACAACAGCCTCCCAAGAAGAAACGATATCATCGTCACACAGCTCACCAGATCCAGGAAATGGAAAATTTATTCAAGGAGTGTCCACACCCAGATGACAAGCAGAGGCAAAAGCTGAGCCTAGATCTGGGGCTGAAACCACGCCAGGTCAAGTTTTGGTTTCAAAATCGCCGAACGCAAATGAAGGCACAACAAGATCGAGCTGATAATGTGATGCTTAGAGCTGAAAATGATAACTTAAAGAATGAGAATTACAGGCTTCAAGCTGCACTACGCAACCTTATATGCCCTAACTGTGGTGGTGCGGCTATAATTGGGGACATTGCCATAGATGAACACCAACTTCGTCTTGAAAACGCCCGACTCCGAGAAGAGTTGGAACGAGTTTGTTGCCTCTCTGGATACCCTGGGGGCCGACAACTCCAAACGATGGGACCGGCAGCCCCTCTAATCGCAGCATCTCTGGACTTGGACATGAATATCTATTCAAGGCATTTCACAGACCCAATGATGAGTTCATGCACTGATCATCATATGATTCCCATGAGCATTTTGCCACCAGAGCCTTCTCACTTCCCTGAGGGAGGTCTGTTGTTAGATGACGAGAAGTTGCTTGCAATGAAGCTCGCTGCTTCGTCTCTTGAAGAACTTGTTAAGATGTGCACTGCTGGTGAGCCTCTTTGGATGAAAAACAGTGAGAATGGAATGGAAATGCTTAATGCTGAAGAACGAGCTCGTTTGTTTCCTTGGCCTATGAACTTCAAACAGAATTCAAGTGATTTAAGAACTGAAGCTACTCGTGATACTGCTGTGGTCATAATGAATAGCATTAATCTTGTGGATGCCTTCCTTGATGCTAATAAGTGGATGGAATTGTTTCCTTCTATTGTGTCTAAAGCAAAAACAGTTCAAGTTATCTCAGCAGATCCTTCTGGTCAAGCAAATGGCTCACTTCAGCTGATGTATGCGGAATTGCAAGTTGTTTCTCCTTTGGTGCCAACTAGAGAAACTCATTTTCTGCGCTATTGTCATCAAAATGAGGAGGAGGGAAGTTGGGCTATTGTCGATTTTCCAATTGACAGTTTTCATGGTAGCTTCCAACCATCCTTTCCGAGGTACAAGAGATGGCCTTCTGGATGTCTCATCCAAGATATGCCTAATGGATACTCAAGGATTACATGGGTAGAACATGCAGAGATAGAGGAAAAGCCTGTCCATCAAATATTCAGTCACTATGCTTATAGCGGGTTGGCTTTTGGGGCACATAGATGGTTGGCTGTTTTACAAAGGCAATGTGAAAGGGTTGCCAGTCTCATGGCCAGAAATATTTCAGACCTTGGAGTGATACCTTCTCCTGAGGCAAGAAGGAATTTAATGAGACTAGCCCAGAGAATGATAAGAACATTTAGTGTTAACATGAGCACATCCGGTGGACAAGCATGGACAGCTCTGTCTGATTCCCCAGATGACACTATTCGAATTACCACTAGGAAAGTCTCAGAGGCTGGCCAACCCAATGGAGTCATTCTCAGTGCAGTTTCCACCACCTGGCTCCCTTATTCTCACTACCGTGTCTTTGAGCTCTTAAGAGATGAACGTCGCAGAGCTCAGCTTGATGTTTTCTCCAATGGAACTTCCTTACAAGAGGTGGCTCACATTGCCAATGGCTCTCATCCTGGAAACTGCATTTCGGTTCTTCGCGTTAATGTAGCTAGCAACTCAACTCAGAACATAGAGCTGATGCTACAAGAGAGCTGCACCGATCAGTCAGGTAGTCTGGTTGTGTATGCAACCATGGACGTGAACGACATCCAATTGGCAATGAGCGGAGAGGACCCGTCCTGCATTCCCCTCCTTCCTCTAGGGTTCGCCATTGTCCCAGTTGAGTCCCCTAACAAGAGTACTACTACAACATCCCCGTCTGACCAATACAGCCGAAACTCGGGTTGCCTGATGACTGTGGGACTCCAAGTTGTTGCCAGTCCAAACCCTTCAGCAAAGCTCAACCTCTCCACCGTTACTGCAATCAACAACCACCTGTGCAACTCGGTTCAGCAGATCATCTCAGCTCTCGGCAACACCACAACAGCTACTGATAATGGCAACAGTGTTGGAGGTGGTGGTGGTTCTTGCTCCGAGCCAACTGCTGCTAGCTCCAAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009791 GO:0009889 GO:0009908 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022414 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0045595 GO:0045596 GO:0048367 GO:0048437 GO:0048497 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090567 GO:0090700 GO:0099402 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

803

Amino Acids

89.07

Weight (kDa)

5.62

Isoelectric Point (pI)

56.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Homeodomain	PF00046	89 - 144	2e-19	Homeodomain
START	PF01852	292 - 516	7.2e-40	START domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0003040)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G46880 AT5G46880 AT5G46880
fragaria_vesca	FvH4_5g22940 FvH4_5g22940 FvH4_5g22940 FvH4_5g22940 FvH4_5g22940 FvH4_5g22940 FvH4_5g22940 FvH4_5g22940 FvH4_5g22940 FvH4_5g22940 FvH4_5g22940
malus_domestica	MD06G1025900.v1.1 MD16G1280500.v1.1 MD16G1280600.v1.1
prunus_persica	Prupe.5G029000_v2.0.a1
pyrus_communis	pycom06g02110
rosa_chinensis	RchiOBHm_Chr7g0211691
rosa_laevigata	RLG00000002987
rosa_multiflora	Rmu_co8435325.1_g000001 Rmu_co8458813.1_g000001 Rmu_sc0003760.1_g000009 Rmu_sc0009130.1_g000001 Rmu_ssc0000166.1_g000001
rosa_roxburghii	Rroxscaffold_3G00247640
rosa_rugosa	Rorug07G0126700 Rorug07G0126800 Rorug07G0126900 Rorug07G0127000 Rorug07G0127100 Rorug07G0127200
rosa_samantha	Rh7AG259600 Rh7BG253600 Rh7CG276400 Rh7DG267000
rosa_wichuraiana	Rw7G022180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1696
AccB1I	GGYRCC	1 cut(s)	1240
AccB7I	CCANNNNNTGG	3 cut(s)	307, 676, 1794
AccBSI	CCGCTC	1 cut(s)	2073
AccII	CGCG	1 cut(s)	1947
AciI	CCGC	4 cut(s)	551, 1214, 1491, 2073
AclWI	GGATC	2 cut(s)	292, 1166
AcoI	YGGCCR	2 cut(s)	1563, 1753
AcsI	RAATTY	3 cut(s)	313, 1015, 1615
AcuI	CTGAAG	5 cut(s)	228, 990, 1056, 1184, 2223
AfaI	GTAC	3 cut(s)	218, 1364, 2149
AfiI	CCNNNNNNNGG	9 cut(s)	301, 307, 373, 542, 676, 830, 1359, 1794, 2188
AflII	CTTAAG	1 cut(s)	1831
AjiI	CACGTC	1 cut(s)	2047
AjnI	CCWGG	5 cut(s)	300, 390, 652, 1793, 1921
AjuI	GAANNNNNNNTTGG	4 cut(s)	745, 777, 1338, 1370
AleI	CACNNNNGTG	1 cut(s)	1815
Alw21I	GWGCWC	5 cut(s)	911, 982, 1670, 1830, 1855
Alw26I	GTCTC	5 cut(s)	888, 1391, 1562, 1618, 1747
Alw44I	GTGCAC	1 cut(s)	907
AlwI	GGATC	2 cut(s)	292, 1166
AlwNI	CAGNNNCTG	2 cut(s)	1751, 2339
Ama87I	CYCGRG	1 cut(s)	2188
AoxI	GGCC	5 cut(s)	658, 995, 1373, 1563, 1753
ApaLI	GTGCAC	1 cut(s)	907
ApeKI	GCWGC	6 cut(s)	512, 686, 701, 875, 2001, 2393
ApoI	RAATTY	3 cut(s)	313, 1015, 1615
ArsI	GACNNNNNNTTYG	2 cut(s)	1459, 1491
AseI	ATTAAT	1 cut(s)	1077
Asp700I	GAANNNNTTC	2 cut(s)	1122, 1573
AspLEI	GCGC	1 cut(s)	1269
AspS9I	GGNCC	3 cut(s)	658, 680, 2080
AsuHPI	GGTGA	2 cut(s)	284, 929
AsuII	TTCGAA	1 cut(s)	1723
AsuNHI	GCTAGC	2 cut(s)	1958, 2396
AvaI	CYCGRG	1 cut(s)	2188
AvaII	GGWCC	2 cut(s)	680, 2080
AxyI	CCTNAGG	2 cut(s)	825, 1602
BaeGI	GKGCMC	2 cut(s)	911, 1510
BaeI	ACNNNNGTAYC	2 cut(s)	1041, 1074
BalI	TGGCCA	2 cut(s)	1565, 1755
BanI	GGYRCC	1 cut(s)	1240
BanII	GRGCYC	3 cut(s)	982, 1830, 1855
BauI	CACGAG	1 cut(s)	1044
Bbv12I	GWGCWC	5 cut(s)	911, 982, 1670, 1830, 1855
BbvI	GCAGC	6 cut(s)	499, 698, 713, 862, 1988, 2380
BccI	CCATC	7 cut(s)	172, 670, 1108, 1357, 1365, 1470, 1509
BcgI	CGANNNNNNTGC	4 cut(s)	618, 652, 2372, 2406
BciT130I	CCWGG	5 cut(s)	302, 392, 654, 1795, 1923
BciVI	GTATCC	2 cut(s)	641, 1403
BclI	TGATCA	1 cut(s)	772
BcoDI	GTCTC	5 cut(s)	888, 1391, 1562, 1618, 1747
BfaI	CTAG	7 cut(s)	368, 1248, 1628, 1734, 1959, 2108, 2397
BfrI	CTTAAG	1 cut(s)	1831
BfuI	GTATCC	2 cut(s)	641, 1403
BglII	AGATCT	1 cut(s)	370
BisI	GCNGC	7 cut(s)	513, 552, 687, 702, 876, 2002, 2394
BlpI	GCTNAGC	2 cut(s)	362, 1854
BlsI	GCNGC	7 cut(s)	514, 553, 688, 703, 877, 2003, 2395
BmcAI	AGTACT	2 cut(s)	218, 2149
Bme1390I	CCNGG	5 cut(s)	302, 392, 654, 1795, 1923
Bme18I	GGWCC	2 cut(s)	680, 2080
BmeT110I	CYCGRG	1 cut(s)	2188
BmgBI	CACGTC	1 cut(s)	2047
BmgT120I	GGNCC	3 cut(s)	658, 680, 2080
BmiI	GGNNCC	5 cut(s)	659, 681, 1242, 1799, 2082
BmrFI	CCNGG	5 cut(s)	302, 392, 654, 1795, 1923
BmrI	ACTGGG	1 cut(s)	2120
BmsI	GCATC	5 cut(s)	450, 713, 1078, 1090, 1977
BmtI	GCTAGC	2 cut(s)	1962, 2400
BmuI	ACTGGG	1 cut(s)	2120
BplI	GAGNNNNNCTC	2 cut(s)	1758, 1790
Bpu1102I	GCTNAGC	2 cut(s)	362, 1854
Bpu14I	TTCGAA	1 cut(s)	1723
BpuEI	CTTGAG	1 cut(s)	1399
BsaJI	CCNNGG	7 cut(s)	30, 652, 653, 992, 1358, 1582, 2040
BsaWI	WCCGGW	1 cut(s)	1673
Bsc4I	CCNNNNNNNGG	9 cut(s)	301, 307, 373, 542, 676, 830, 1359, 1794, 2188
Bse118I	RCCGGY	1 cut(s)	682
Bse1I	ACTGG	3 cut(s)	1554, 2126, 2226
Bse21I	CCTNAGG	2 cut(s)	825, 1602
Bse3DI	GCAATG	5 cut(s)	567, 870, 1544, 1902, 2073
BseBI	CCWGG	5 cut(s)	302, 392, 654, 1795, 1923
BseDI	CCNNGG	7 cut(s)	30, 652, 653, 992, 1358, 1582, 2040
BseLI	CCNNNNNNNGG	9 cut(s)	301, 307, 373, 542, 676, 830, 1359, 1794, 2188
BseMI	GCAATG	5 cut(s)	567, 870, 1544, 1902, 2073
BseMII	CTCAG	9 cut(s)	353, 816, 1179, 1593, 1758, 1789, 1868, 1985, 2325
BseNI	ACTGG	3 cut(s)	1554, 2126, 2226
BseRI	GAGGAG	2 cut(s)	1301, 1304
BseSI	GKGCMC	2 cut(s)	911, 1510
BseXI	GCAGC	6 cut(s)	499, 698, 713, 862, 1988, 2380
BsgI	GTGCAG	3 cut(s)	498, 1800, 1987
Bsh1236I	CGCG	1 cut(s)	1947
BshFI	GGCC	5 cut(s)	660, 997, 1375, 1565, 1755
BshNI	GGYRCC	1 cut(s)	1240
BsiHKAI	GWGCWC	5 cut(s)	911, 982, 1670, 1830, 1855
BsiHKCI	CYCGRG	1 cut(s)	2188
BsiSI	CCGG	2 cut(s)	683, 1674
BslFI	GGGAC	5 cut(s)	578, 693, 2108, 2119, 2223
BslI	CCNNNNNNNGG	9 cut(s)	301, 307, 373, 542, 676, 830, 1359, 1794, 2188
BsmAI	GTCTC	5 cut(s)	888, 1391, 1562, 1618, 1747
BsmBI	CGTCTC	1 cut(s)	888
BsmFI	GGGAC	5 cut(s)	578, 693, 2108, 2119, 2223
BsmI	GAATGC	1 cut(s)	2091
BsnI	GGCC	5 cut(s)	660, 997, 1375, 1565, 1755
BsoBI	CYCGRG	1 cut(s)	2188
Bsp119I	TTCGAA	1 cut(s)	1723
Bsp1286I	GDGCHC	6 cut(s)	911, 982, 1510, 1670, 1830, 1855
Bsp143I	GATC	7 cut(s)	297, 370, 442, 772, 1171, 2008, 2304
Bsp1720I	GCTNAGC	2 cut(s)	362, 1854
Bsp19I	CCATGG	2 cut(s)	30, 2040
BspACI	CCGC	4 cut(s)	551, 1214, 1491, 2073
BspANI	GGCC	5 cut(s)	660, 997, 1375, 1565, 1755
BspCNI	CTCAG	9 cut(s)	354, 817, 1178, 1594, 1757, 1788, 1867, 1984, 2324
BspFNI	CGCG	1 cut(s)	1947
BspLI	GGNNCC	5 cut(s)	659, 681, 1242, 1799, 2082
BspOI	GCTAGC	2 cut(s)	1962, 2400
BspPI	GGATC	2 cut(s)	292, 1166
BspT104I	TTCGAA	1 cut(s)	1723
BspT107I	GGYRCC	1 cut(s)	1240
BspTI	CTTAAG	1 cut(s)	1831
BsrBI	CCGCTC	1 cut(s)	2073
BsrDI	GCAATG	5 cut(s)	567, 870, 1544, 1902, 2073
BsrFI	RCCGGY	1 cut(s)	682
BsrI	ACTGG	3 cut(s)	1554, 2126, 2226
BssAI	RCCGGY	1 cut(s)	682
BssECI	CCNNGG	7 cut(s)	30, 652, 653, 992, 1358, 1582, 2040
BssMI	GATC	7 cut(s)	297, 370, 442, 772, 1171, 2008, 2304
BssSI	CACGAG	1 cut(s)	1044
BssT1I	CCWWGG	4 cut(s)	30, 992, 1582, 2040
Bst2BI	CACGAG	1 cut(s)	1044
Bst2UI	CCWGG	5 cut(s)	302, 392, 654, 1795, 1923
Bst4CI	ACNGT	8 cut(s)	542, 941, 1153, 1328, 1817, 2206, 2263, 2354
Bst6I	CTCTTC	2 cut(s)	127, 612
BstAFI	CTTAAG	1 cut(s)	1831
BstBI	TTCGAA	1 cut(s)	1723
BstC8I	GCNNGC	5 cut(s)	861, 873, 1753, 1960, 2398
BstDSI	CCRYGG	2 cut(s)	30, 2040
BstENI	CCTNNNNNAGG	2 cut(s)	828, 1357
BstFNI	CGCG	1 cut(s)	1947
BstHHI	GCGC	1 cut(s)	1269
BstKTI	GATC	7 cut(s)	300, 373, 445, 775, 1174, 2011, 2307
BstMAI	GTCTC	5 cut(s)	888, 1391, 1562, 1618, 1747
BstMBI	GATC	7 cut(s)	297, 370, 442, 772, 1171, 2008, 2304
BstMWI	GCNNNNNNNGC	6 cut(s)	112, 253, 808, 1505, 1691, 1904
BstNI	CCWGG	5 cut(s)	302, 392, 654, 1795, 1923
BstNSI	RCATGY	2 cut(s)	206, 1439
BstSCI	CCNGG	5 cut(s)	300, 390, 652, 1793, 1921
BstSLI	GKGCMC	2 cut(s)	911, 1510
BstUI	CGCG	1 cut(s)	1947
BstV1I	GCAGC	6 cut(s)	499, 698, 713, 862, 1988, 2380
BstX2I	RGATCY	3 cut(s)	297, 370, 1171
BstXI	CCANNNNNNTGG	2 cut(s)	1561, 1763
BstYI	RGATCY	3 cut(s)	297, 370, 1171
Bsu36I	CCTNAGG	2 cut(s)	825, 1602
BsuI	GTATCC	2 cut(s)	641, 1403
BsuRI	GGCC	5 cut(s)	660, 997, 1375, 1565, 1755
BtgI	CCRYGG	2 cut(s)	30, 2040
BtrI	CACGTC	1 cut(s)	2047
BtsI	GCAGTG	1 cut(s)	909
BtsIMutI	CAGTG	5 cut(s)	768, 909, 946, 1783, 2359
Cac8I	GCNNGC	5 cut(s)	861, 873, 1753, 1960, 2398
CaiI	CAGNNNCTG	2 cut(s)	1751, 2339
CfoI	GCGC	1 cut(s)	1269
Cfr10I	RCCGGY	1 cut(s)	682
Cfr13I	GGNCC	3 cut(s)	658, 680, 2080
Csp6I	GTAC	3 cut(s)	217, 1363, 2148
CviQI	GTAC	3 cut(s)	217, 1363, 2148
DpnI	GATC	7 cut(s)	299, 372, 444, 774, 1173, 2010, 2306
DpnII	GATC	7 cut(s)	297, 370, 442, 772, 1171, 2008, 2304
DrdI	GACNNNNNNGTC	1 cut(s)	1696
DseDI	GACNNNNNNGTC	1 cut(s)	1696
EaeI	YGGCCR	2 cut(s)	1563, 1753
Eam1104I	CTCTTC	2 cut(s)	127, 612
EarI	CTCTTC	2 cut(s)	127, 612
Ecl136II	GAGCTC	3 cut(s)	980, 1828, 1853
Eco130I	CCWWGG	4 cut(s)	30, 992, 1582, 2040
Eco24I	GRGCYC	3 cut(s)	982, 1830, 1855
Eco32I	GATATC	1 cut(s)	275
Eco47I	GGWCC	2 cut(s)	680, 2080
Eco53kI	GAGCTC	3 cut(s)	980, 1828, 1853
Eco57I	CTGAAG	5 cut(s)	228, 990, 1056, 1184, 2223
Eco81I	CCTNAGG	2 cut(s)	825, 1602
Eco88I	CYCGRG	1 cut(s)	2188
EcoICRI	GAGCTC	3 cut(s)	980, 1828, 1853
EcoNI	CCTNNNNNAGG	2 cut(s)	828, 1357
EcoO109I	RGGNCCY	1 cut(s)	2080
EcoRI	GAATTC	1 cut(s)	1015
EcoRII	CCWGG	5 cut(s)	300, 390, 652, 1793, 1921
EcoRV	GATATC	1 cut(s)	275
EcoT14I	CCWWGG	4 cut(s)	30, 992, 1582, 2040
EcoT38I	GRGCYC	3 cut(s)	982, 1830, 1855
ErhI	CCWWGG	4 cut(s)	30, 992, 1582, 2040
Esp3I	CGTCTC	1 cut(s)	888
FaqI	GGGAC	5 cut(s)	578, 693, 2108, 2119, 2223
FauI	CCCGC	1 cut(s)	1484
FauNDI	CATATG	1 cut(s)	780
FbaI	TGATCA	1 cut(s)	772
Fnu4HI	GCNGC	7 cut(s)	513, 552, 687, 702, 876, 2002, 2394
FriOI	GRGCYC	3 cut(s)	982, 1830, 1855
Fsp4HI	GCNGC	7 cut(s)	513, 552, 687, 702, 876, 2002, 2394
FspBI	CTAG	7 cut(s)	368, 1248, 1628, 1734, 1959, 2108, 2397
GlaI	GCGC	1 cut(s)	1268
GluI	GCNGC	7 cut(s)	513, 552, 687, 702, 876, 2002, 2394
HaeIII	GGCC	5 cut(s)	660, 997, 1375, 1565, 1755
HapII	CCGG	2 cut(s)	683, 1674
HhaI	GCGC	1 cut(s)	1269
Hin6I	GCGC	1 cut(s)	1267
HinP1I	GCGC	1 cut(s)	1267
HincII	GTYRAC	3 cut(s)	27, 52, 1660
HindII	GTYRAC	3 cut(s)	27, 52, 1660
HinfI	GANTC	6 cut(s)	609, 784, 1703, 1767, 2132, 2211
HpaI	GTTAAC	1 cut(s)	1660
HpaII	CCGG	2 cut(s)	683, 1674
HphI	GGTGA	2 cut(s)	284, 929
Hpy166II	GTNNAC	8 cut(s)	27, 52, 200, 332, 909, 1660, 1679, 2050
Hpy188III	TCNNGA	7 cut(s)	596, 645, 710, 887, 1046, 1380, 1601
Hpy8I	GTNNAC	8 cut(s)	27, 52, 200, 332, 909, 1660, 1679, 2050
Hpy99I	CGWCG	1 cut(s)	1848
HpyCH4III	ACNGT	8 cut(s)	542, 941, 1153, 1328, 1817, 2206, 2263, 2354
HpyCH4IV	ACGT	2 cut(s)	1843, 2046
HpyF10VI	GCNNNNNNNGC	6 cut(s)	112, 253, 808, 1505, 1691, 1904
HpySE526I	ACGT	2 cut(s)	1843, 2046
HspAI	GCGC	1 cut(s)	1267
Ksp22I	TGATCA	1 cut(s)	772
KspAI	GTTAAC	1 cut(s)	1660
Kzo9I	GATC	7 cut(s)	297, 370, 442, 772, 1171, 2008, 2304
LmnI	GCTCC	3 cut(s)	1803, 2384, 2405
Lsp1109I	GCAGC	6 cut(s)	499, 698, 713, 862, 1988, 2380
LweI	GCATC	5 cut(s)	450, 713, 1078, 1090, 1977
MaeI	CTAG	7 cut(s)	368, 1248, 1628, 1734, 1959, 2108, 2397
MaeII	ACGT	2 cut(s)	1843, 2046
MaeIII	GTNAC	3 cut(s)	281, 1475, 2263
MalI	GATC	7 cut(s)	299, 372, 444, 774, 1173, 2010, 2306
MbiI	CCGCTC	1 cut(s)	2073
MboI	GATC	7 cut(s)	297, 370, 442, 772, 1171, 2008, 2304
MboII	GAAGA	9 cut(s)	114, 152, 221, 248, 277, 629, 902, 983, 1934
MfeI	CAATTG	2 cut(s)	1320, 2060
MflI	RGATCY	3 cut(s)	297, 370, 1171
MhlI	GDGCHC	6 cut(s)	911, 982, 1510, 1670, 1830, 1855
MlsI	TGGCCA	2 cut(s)	1565, 1755
MluNI	TGGCCA	2 cut(s)	1565, 1755
MlyI	GAGTC	4 cut(s)	603, 1776, 2141, 2205
MmeI	TCCRAC	3 cut(s)	603, 1369, 2338
Mox20I	TGGCCA	2 cut(s)	1565, 1755
MroXI	GAANNNNTTC	2 cut(s)	1122, 1573
MscI	TGGCCA	2 cut(s)	1565, 1755
MslI	CAYNNNNRTG	5 cut(s)	339, 1281, 1513, 1815, 2045
Msp20I	TGGCCA	2 cut(s)	1565, 1755
MspA1I	CMGCKG	1 cut(s)	1204
MspCI	CTTAAG	1 cut(s)	1831
MspI	CCGG	2 cut(s)	683, 1674
MspR9I	CCNGG	5 cut(s)	302, 392, 654, 1795, 1923
MunI	CAATTG	2 cut(s)	1320, 2060
Mva1269I	GAATGC	1 cut(s)	2091
MvaI	CCWGG	5 cut(s)	302, 392, 654, 1795, 1923
MvnI	CGCG	1 cut(s)	1947
MwoI	GCNNNNNNNGC	6 cut(s)	112, 253, 808, 1505, 1691, 1904
NcoI	CCATGG	2 cut(s)	30, 2040
NdeI	CATATG	1 cut(s)	780
NdeII	GATC	7 cut(s)	297, 370, 442, 772, 1171, 2008, 2304
NheI	GCTAGC	2 cut(s)	1958, 2396
NlaIV	GGNNCC	5 cut(s)	659, 681, 1242, 1799, 2082
NmeAIII	GCCGAG	1 cut(s)	2298
NmuCI	GTSAC	2 cut(s)	281, 1475
NspI	RCATGY	2 cut(s)	206, 1439
NspV	TTCGAA	1 cut(s)	1723
OliI	CACNNNNGTG	1 cut(s)	1815
PasI	CCCWGGG	1 cut(s)	653
PcsI	WCGNNNNNNNCGW	1 cut(s)	277
PctI	GAATGC	1 cut(s)	2091
PdmI	GAANNNNTTC	2 cut(s)	1122, 1573
PfeI	GAWTC	2 cut(s)	784, 1703
PflMI	CCANNNNNTGG	3 cut(s)	307, 676, 1794
PfoI	TCCNGGA	2 cut(s)	300, 1921
PkrI	GCNGC	7 cut(s)	514, 553, 688, 703, 877, 2003, 2395
PleI	GAGTC	4 cut(s)	603, 1775, 2140, 2205
PpsI	GAGTC	4 cut(s)	603, 1775, 2140, 2205
PpuMI	RGGWCCY	1 cut(s)	2080
PshBI	ATTAAT	1 cut(s)	1077
Psp124BI	GAGCTC	3 cut(s)	982, 1830, 1855
Psp5II	RGGWCCY	1 cut(s)	2080
Psp6I	CCWGG	5 cut(s)	300, 390, 652, 1793, 1921
PspGI	CCWGG	5 cut(s)	300, 390, 652, 1793, 1921
PspN4I	GGNNCC	5 cut(s)	659, 681, 1242, 1799, 2082
PspPI	GGNCC	3 cut(s)	658, 680, 2080
PspPPI	RGGWCCY	1 cut(s)	2080
PsrI	GAACNNNNNNTAC	2 cut(s)	1024, 1056
PstNI	CAGNNNCTG	2 cut(s)	1751, 2339
PsuI	RGATCY	3 cut(s)	297, 370, 1171
PvuII	CAGCTG	1 cut(s)	1204
RsaI	GTAC	3 cut(s)	218, 1364, 2149
RsaNI	GTAC	3 cut(s)	217, 1363, 2148
RseI	CAYNNNNRTG	5 cut(s)	339, 1281, 1513, 1815, 2045
SacI	GAGCTC	3 cut(s)	982, 1830, 1855
SatI	GCNGC	7 cut(s)	513, 552, 687, 702, 876, 2002, 2394
Sau3AI	GATC	7 cut(s)	297, 370, 442, 772, 1171, 2008, 2304
Sau96I	GGNCC	3 cut(s)	658, 680, 2080
ScaI	AGTACT	2 cut(s)	218, 2149
SchI	GAGTC	4 cut(s)	603, 1776, 2141, 2205
ScrFI	CCNGG	5 cut(s)	302, 392, 654, 1795, 1923
SduI	GDGCHC	6 cut(s)	911, 982, 1510, 1670, 1830, 1855
SfaNI	GCATC	5 cut(s)	450, 713, 1078, 1090, 1977
SfuI	TTCGAA	1 cut(s)	1723
SinI	GGWCC	2 cut(s)	680, 2080
SmiMI	CAYNNNNRTG	5 cut(s)	339, 1281, 1513, 1815, 2045
SmlI	CTYRAG	2 cut(s)	1414, 1831
SmoI	CTYRAG	2 cut(s)	1414, 1831
SsiI	CCGC	4 cut(s)	551, 1214, 1491, 2073
SspI	AATATT	2 cut(s)	1470, 1573
SspMI	CTAG	7 cut(s)	368, 1248, 1628, 1734, 1959, 2108, 2397
SstI	GAGCTC	3 cut(s)	982, 1830, 1855
StyD4I	CCNGG	5 cut(s)	300, 390, 652, 1793, 1921
StyI	CCWWGG	4 cut(s)	30, 992, 1582, 2040
TaaI	ACNGT	8 cut(s)	542, 941, 1153, 1328, 1817, 2206, 2263, 2354
TaiI	ACGT	2 cut(s)	1846, 2049
TaqI	TCGA	3 cut(s)	445, 1311, 1723
TatI	WGTACW	2 cut(s)	216, 2147
TauI	GCSGC	1 cut(s)	554
TfiI	GAWTC	2 cut(s)	784, 1703
TscAI	CASTG	5 cut(s)	775, 916, 946, 1783, 2359
TseFI	GTSAC	2 cut(s)	281, 1475
TseI	GCWGC	6 cut(s)	512, 686, 701, 875, 2001, 2393
Tsp45I	GTSAC	2 cut(s)	281, 1475
TspRI	CASTG	5 cut(s)	775, 916, 946, 1783, 2359
Van91I	CCANNNNNTGG	3 cut(s)	307, 676, 1794
Vha464I	CTTAAG	1 cut(s)	1831
VneI	GTGCAC	1 cut(s)	907
VpaK11BI	GGWCC	2 cut(s)	680, 2080
VspI	ATTAAT	1 cut(s)	1077
XagI	CCTNNNNNAGG	2 cut(s)	828, 1357
XapI	RAATTY	3 cut(s)	313, 1015, 1615
XceI	RCATGY	2 cut(s)	206, 1439
XmnI	GAANNNNTTC	2 cut(s)	1122, 1573
XspI	CTAG	7 cut(s)	368, 1248, 1628, 1734, 1959, 2108, 2397
ZrmI	AGTACT	2 cut(s)	218, 2149

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.