4-coumarate--CoA ligase-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G19010 |
| fragaria_vesca | FvH4_5g23550 |
| malus_domestica | MD14G1050700.v1.1 |
| prunus_persica | Prupe.7G085200_v2.0.a1 Prupe.8G160600_v2.0.a1 |
| pyrus_communis | pycom12g04570 pycom14g04200 |
| rosa_chinensis | RchiOBHm_Chr3g0478721 RchiOBHm_Chr7g0212861 |
| rosa_laevigata | RLG00000002864 RLG00000023630 |
| rosa_multiflora | Rmu_sc0000394.1_g000050 Rmu_sc0001519.1_g000013 |
| rosa_roxburghii | Rroxscaffold_3G00246500 Rroxscaffold_6G00403160 |
| rosa_rugosa | Rorug03G0167300 Rorug03G0167400 Rorug07G0137100 |
| rosa_samantha | Rh3AG219500 Rh3BG251200 Rh3CG248100 Rh3CG248200 Rh3DG244500 Rh7BG264300 Rh7CG287700 Rh7DG276800 |
| rosa_wichuraiana | Rw3G019720 Rw7G023220 Rw7G023340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1027 |
| Acc65I | GGTACC | 1 cut(s) | 1549 |
| AccB1I | GGYRCC | 1 cut(s) | 1549 |
| AccI | GTMKAC | 1 cut(s) | 378 |
| AciI | CCGC | 1 cut(s) | 763 |
| AclWI | GGATC | 3 cut(s) | 1242, 1255, 1690 |
| AcsI | RAATTY | 2 cut(s) | 733, 902 |
| AdeI | CACNNNGTG | 1 cut(s) | 344 |
| AfaI | GTAC | 1 cut(s) | 1551 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 140, 1705 |
| AgsI | TTSAA | 9 cut(s) | 270, 582, 792, 799, 1165, 1194, 1299, 1318, 1671 |
| AjnI | CCWGG | 1 cut(s) | 559 |
| Alw21I | GWGCWC | 1 cut(s) | 1713 |
| Alw26I | GTCTC | 3 cut(s) | 208, 928, 1130 |
| AlwI | GGATC | 3 cut(s) | 1242, 1255, 1690 |
| AoxI | GGCC | 3 cut(s) | 309, 316, 644 |
| ApeKI | GCWGC | 6 cut(s) | 153, 658, 671, 1052, 1363, 1685 |
| ApoI | RAATTY | 2 cut(s) | 733, 902 |
| Asp718I | GGTACC | 1 cut(s) | 1549 |
| AspS9I | GGNCC | 1 cut(s) | 1292 |
| AsuC2I | CCSGG | 2 cut(s) | 691, 1372 |
| AsuHPI | GGTGA | 3 cut(s) | 123, 356, 1286 |
| AvaII | GGWCC | 1 cut(s) | 1292 |
| BaeGI | GKGCMC | 1 cut(s) | 1015 |
| BamHI | GGATCC | 1 cut(s) | 1247 |
| BanI | GGYRCC | 1 cut(s) | 1549 |
| BanII | GRGCYC | 1 cut(s) | 1713 |
| BauI | CACGAG | 1 cut(s) | 1155 |
| Bbv12I | GWGCWC | 1 cut(s) | 1713 |
| BbvI | GCAGC | 6 cut(s) | 165, 658, 670, 1064, 1350, 1697 |
| BccI | CCATC | 1 cut(s) | 1349 |
| BciT130I | CCWGG | 1 cut(s) | 561 |
| BciVI | GTATCC | 1 cut(s) | 1394 |
| BclI | TGATCA | 1 cut(s) | 651 |
| BcnI | CCSGG | 2 cut(s) | 691, 1372 |
| BcoDI | GTCTC | 3 cut(s) | 208, 928, 1130 |
| BfaI | CTAG | 3 cut(s) | 1266, 1505, 1731 |
| BfmI | CTRYAG | 7 cut(s) | 148, 744, 1022, 1143, 1464, 1683, 1736 |
| BfuAI | ACCTGC | 1 cut(s) | 1027 |
| BfuI | GTATCC | 1 cut(s) | 1394 |
| BglII | AGATCT | 1 cut(s) | 1679 |
| BisI | GCNGC | 6 cut(s) | 154, 659, 672, 1053, 1364, 1686 |
| BlsI | GCNGC | 6 cut(s) | 155, 660, 673, 1054, 1365, 1687 |
| Bme1390I | CCNGG | 3 cut(s) | 561, 691, 1372 |
| Bme18I | GGWCC | 1 cut(s) | 1292 |
| BmgT120I | GGNCC | 1 cut(s) | 1292 |
| BmiI | GGNNCC | 2 cut(s) | 1249, 1551 |
| BmrFI | CCNGG | 3 cut(s) | 561, 691, 1372 |
| BmrI | ACTGGG | 2 cut(s) | 174, 953 |
| BmsI | GCATC | 1 cut(s) | 1501 |
| BmuI | ACTGGG | 2 cut(s) | 174, 953 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 908, 940 |
| BpmI | CTGGAG | 1 cut(s) | 1245 |
| BpuEI | CTTGAG | 1 cut(s) | 34 |
| BpuMI | CCSGG | 2 cut(s) | 691, 1372 |
| BsaI | GGTCTC | 1 cut(s) | 928 |
| BsaJI | CCNNGG | 3 cut(s) | 119, 306, 1371 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 140, 1705 |
| Bse1I | ACTGG | 5 cut(s) | 180, 647, 703, 959, 1553 |
| Bse3DI | GCAATG | 2 cut(s) | 42, 490 |
| BseBI | CCWGG | 1 cut(s) | 561 |
| BseDI | CCNNGG | 3 cut(s) | 119, 306, 1371 |
| BseGI | GGATG | 4 cut(s) | 115, 686, 1009, 1492 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 140, 1705 |
| BseMI | GCAATG | 2 cut(s) | 42, 490 |
| BseMII | CTCAG | 5 cut(s) | 939, 1125, 1488, 1607, 1726 |
| BseNI | ACTGG | 5 cut(s) | 180, 647, 703, 959, 1553 |
| BseRI | GAGGAG | 1 cut(s) | 1094 |
| BseSI | GKGCMC | 1 cut(s) | 1015 |
| BseXI | GCAGC | 6 cut(s) | 165, 658, 670, 1064, 1350, 1697 |
| BshFI | GGCC | 3 cut(s) | 311, 318, 646 |
| BshNI | GGYRCC | 1 cut(s) | 1549 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1713 |
| BsiSI | CCGG | 2 cut(s) | 690, 1371 |
| BslFI | GGGAC | 1 cut(s) | 706 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 140, 1705 |
| BsmAI | GTCTC | 3 cut(s) | 208, 928, 1130 |
| BsmBI | CGTCTC | 1 cut(s) | 1130 |
| BsmFI | GGGAC | 1 cut(s) | 706 |
| BsnI | GGCC | 3 cut(s) | 311, 318, 646 |
| Bso31I | GGTCTC | 1 cut(s) | 928 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1015, 1713 |
| Bsp143I | GATC | 6 cut(s) | 651, 1176, 1247, 1417, 1679, 1695 |
| Bsp19I | CCATGG | 2 cut(s) | 119, 306 |
| BspACI | CCGC | 1 cut(s) | 763 |
| BspANI | GGCC | 3 cut(s) | 311, 318, 646 |
| BspCNI | CTCAG | 5 cut(s) | 938, 1126, 1489, 1606, 1725 |
| BspLI | GGNNCC | 2 cut(s) | 1249, 1551 |
| BspMAI | CTGCAG | 4 cut(s) | 1026, 1147, 1468, 1687 |
| BspMI | ACCTGC | 1 cut(s) | 1027 |
| BspPI | GGATC | 3 cut(s) | 1242, 1255, 1690 |
| BspT107I | GGYRCC | 1 cut(s) | 1549 |
| BspTNI | GGTCTC | 1 cut(s) | 928 |
| BsrDI | GCAATG | 2 cut(s) | 42, 490 |
| BsrI | ACTGG | 5 cut(s) | 180, 647, 703, 959, 1553 |
| BssECI | CCNNGG | 3 cut(s) | 119, 306, 1371 |
| BssMI | GATC | 6 cut(s) | 651, 1176, 1247, 1417, 1679, 1695 |
| BssSI | CACGAG | 1 cut(s) | 1155 |
| BssT1I | CCWWGG | 2 cut(s) | 119, 306 |
| Bst2BI | CACGAG | 1 cut(s) | 1155 |
| Bst2UI | CCWGG | 1 cut(s) | 561 |
| Bst4CI | ACNGT | 3 cut(s) | 230, 748, 1583 |
| BstC8I | GCNNGC | 2 cut(s) | 531, 1221 |
| BstDEI | CTNAG | 7 cut(s) | 443, 641, 925, 1134, 1497, 1593, 1712 |
| BstDSI | CCRYGG | 2 cut(s) | 119, 306 |
| BstF5I | GGATG | 4 cut(s) | 115, 686, 1009, 1492 |
| BstKTI | GATC | 6 cut(s) | 654, 1179, 1250, 1420, 1682, 1698 |
| BstMAI | GTCTC | 3 cut(s) | 208, 928, 1130 |
| BstMBI | GATC | 6 cut(s) | 651, 1176, 1247, 1417, 1679, 1695 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 364, 760, 1708 |
| BstNI | CCWGG | 1 cut(s) | 561 |
| BstNSI | RCATGY | 2 cut(s) | 492, 1219 |
| BstSCI | CCNGG | 3 cut(s) | 559, 689, 1370 |
| BstSFI | CTRYAG | 7 cut(s) | 148, 744, 1022, 1143, 1464, 1683, 1736 |
| BstSLI | GKGCMC | 1 cut(s) | 1015 |
| BstV1I | GCAGC | 6 cut(s) | 165, 658, 670, 1064, 1350, 1697 |
| BstX2I | RGATCY | 3 cut(s) | 1247, 1679, 1695 |
| BstYI | RGATCY | 3 cut(s) | 1247, 1679, 1695 |
| BsuI | GTATCC | 1 cut(s) | 1394 |
| BsuRI | GGCC | 3 cut(s) | 311, 318, 646 |
| BtgI | CCRYGG | 2 cut(s) | 119, 306 |
| BtsCI | GGATG | 4 cut(s) | 115, 686, 1009, 1492 |
| BtsI | GCAGTG | 2 cut(s) | 454, 666 |
| BtsIMutI | CAGTG | 8 cut(s) | 187, 235, 454, 654, 666, 753, 1560, 1588 |
| BveI | ACCTGC | 1 cut(s) | 1027 |
| Cac8I | GCNNGC | 2 cut(s) | 531, 1221 |
| Cfr13I | GGNCC | 1 cut(s) | 1292 |
| Csp6I | GTAC | 1 cut(s) | 1550 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 211, 246 |
| CviQI | GTAC | 1 cut(s) | 1550 |
| DdeI | CTNAG | 7 cut(s) | 443, 641, 925, 1134, 1497, 1593, 1712 |
| DpnI | GATC | 6 cut(s) | 653, 1178, 1249, 1419, 1681, 1697 |
| DpnII | GATC | 6 cut(s) | 651, 1176, 1247, 1417, 1679, 1695 |
| DraI | TTTAAA | 1 cut(s) | 1032 |
| DraIII | CACNNNGTG | 1 cut(s) | 344 |
| Ecl136II | GAGCTC | 1 cut(s) | 1711 |
| Eco130I | CCWWGG | 2 cut(s) | 119, 306 |
| Eco24I | GRGCYC | 1 cut(s) | 1713 |
| Eco31I | GGTCTC | 1 cut(s) | 928 |
| Eco32I | GATATC | 2 cut(s) | 1378, 1603 |
| Eco47I | GGWCC | 1 cut(s) | 1292 |
| Eco53kI | GAGCTC | 1 cut(s) | 1711 |
| EcoICRI | GAGCTC | 1 cut(s) | 1711 |
| EcoO109I | RGGNCCY | 1 cut(s) | 1292 |
| EcoRII | CCWGG | 1 cut(s) | 559 |
| EcoRV | GATATC | 2 cut(s) | 1378, 1603 |
| EcoT14I | CCWWGG | 2 cut(s) | 119, 306 |
| EcoT22I | ATGCAT | 1 cut(s) | 490 |
| EcoT38I | GRGCYC | 1 cut(s) | 1713 |
| ErhI | CCWWGG | 2 cut(s) | 119, 306 |
| Esp3I | CGTCTC | 1 cut(s) | 1130 |
| FaqI | GGGAC | 1 cut(s) | 706 |
| FbaI | TGATCA | 1 cut(s) | 651 |
| FblI | GTMKAC | 1 cut(s) | 378 |
| Fnu4HI | GCNGC | 6 cut(s) | 154, 659, 672, 1053, 1364, 1686 |
| FokI | GGATG | 4 cut(s) | 102, 673, 1016, 1479 |
| FriOI | GRGCYC | 1 cut(s) | 1713 |
| Fsp4HI | GCNGC | 6 cut(s) | 154, 659, 672, 1053, 1364, 1686 |
| FspBI | CTAG | 3 cut(s) | 1266, 1505, 1731 |
| GluI | GCNGC | 6 cut(s) | 154, 659, 672, 1053, 1364, 1686 |
| GsuI | CTGGAG | 1 cut(s) | 1245 |
| HaeIII | GGCC | 3 cut(s) | 311, 318, 646 |
| HapII | CCGG | 2 cut(s) | 690, 1371 |
| HincII | GTYRAC | 2 cut(s) | 172, 1341 |
| HindII | GTYRAC | 2 cut(s) | 172, 1341 |
| HindIII | AAGCTT | 1 cut(s) | 793 |
| HinfI | GANTC | 4 cut(s) | 144, 251, 302, 578 |
| HpaI | GTTAAC | 1 cut(s) | 172 |
| HpaII | CCGG | 2 cut(s) | 690, 1371 |
| HphI | GGTGA | 3 cut(s) | 123, 356, 1286 |
| Hpy166II | GTNNAC | 6 cut(s) | 172, 379, 1277, 1341, 1586, 1662 |
| Hpy188I | TCNGA | 4 cut(s) | 1092, 1455, 1649, 1715 |
| Hpy188III | TCNNGA | 5 cut(s) | 194, 1180, 1496, 1595, 1731 |
| Hpy8I | GTNNAC | 6 cut(s) | 172, 379, 1277, 1341, 1586, 1662 |
| HpyAV | CCTTC | 5 cut(s) | 39, 1106, 1305, 1636, 1698 |
| HpyCH4III | ACNGT | 3 cut(s) | 230, 748, 1583 |
| HpyCH4IV | ACGT | 1 cut(s) | 1614 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 364, 760, 1708 |
| HpyF3I | CTNAG | 7 cut(s) | 443, 641, 925, 1134, 1497, 1593, 1712 |
| HpySE526I | ACGT | 1 cut(s) | 1614 |
| KpnI | GGTACC | 1 cut(s) | 1553 |
| Ksp22I | TGATCA | 1 cut(s) | 651 |
| KspAI | GTTAAC | 1 cut(s) | 172 |
| Kzo9I | GATC | 6 cut(s) | 651, 1176, 1247, 1417, 1679, 1695 |
| LmnI | GCTCC | 6 cut(s) | 751, 1049, 1060, 1213, 1465, 1708 |
| Lsp1109I | GCAGC | 6 cut(s) | 165, 658, 670, 1064, 1350, 1697 |
| LweI | GCATC | 1 cut(s) | 1501 |
| MaeI | CTAG | 3 cut(s) | 1266, 1505, 1731 |
| MaeII | ACGT | 1 cut(s) | 1614 |
| MaeIII | GTNAC | 6 cut(s) | 182, 424, 946, 1284, 1310, 1516 |
| MalI | GATC | 6 cut(s) | 653, 1178, 1249, 1419, 1681, 1697 |
| MboI | GATC | 6 cut(s) | 651, 1176, 1247, 1417, 1679, 1695 |
| MboII | GAAGA | 6 cut(s) | 811, 910, 1182, 1547, 1610, 1705 |
| MfeI | CAATTG | 4 cut(s) | 549, 930, 1194, 1344 |
| MflI | RGATCY | 3 cut(s) | 1247, 1679, 1695 |
| MhlI | GDGCHC | 2 cut(s) | 1015, 1713 |
| MluCI | AATT | 8 cut(s) | 370, 549, 733, 902, 930, 1194, 1299, 1344 |
| MlyI | GAGTC | 1 cut(s) | 311 |
| MmeI | TCCRAC | 3 cut(s) | 841, 1082, 1492 |
| Mph1103I | ATGCAT | 1 cut(s) | 490 |
| MseI | TTAA | 8 cut(s) | 62, 171, 462, 474, 912, 977, 986, 1031 |
| MslI | CAYNNNNRTG | 3 cut(s) | 165, 326, 1581 |
| MspI | CCGG | 2 cut(s) | 690, 1371 |
| MspR9I | CCNGG | 3 cut(s) | 561, 691, 1372 |
| MunI | CAATTG | 4 cut(s) | 549, 930, 1194, 1344 |
| MvaI | CCWGG | 1 cut(s) | 561 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 364, 760, 1708 |
| NciI | CCSGG | 2 cut(s) | 691, 1372 |
| NcoI | CCATGG | 2 cut(s) | 119, 306 |
| NdeII | GATC | 6 cut(s) | 651, 1176, 1247, 1417, 1679, 1695 |
| NlaIV | GGNNCC | 2 cut(s) | 1249, 1551 |
| NmuCI | GTSAC | 2 cut(s) | 182, 946 |
| NsiI | ATGCAT | 1 cut(s) | 490 |
| NspI | RCATGY | 2 cut(s) | 492, 1219 |
| PfeI | GAWTC | 3 cut(s) | 144, 251, 578 |
| PfoI | TCCNGGA | 2 cut(s) | 559, 689 |
| PkrI | GCNGC | 6 cut(s) | 155, 660, 673, 1054, 1365, 1687 |
| PleI | GAGTC | 1 cut(s) | 310 |
| PpsI | GAGTC | 1 cut(s) | 310 |
| PpuMI | RGGWCCY | 1 cut(s) | 1292 |
| Psp124BI | GAGCTC | 1 cut(s) | 1713 |
| Psp5II | RGGWCCY | 1 cut(s) | 1292 |
| Psp6I | CCWGG | 1 cut(s) | 559 |
| PspGI | CCWGG | 1 cut(s) | 559 |
| PspN4I | GGNNCC | 2 cut(s) | 1249, 1551 |
| PspPI | GGNCC | 1 cut(s) | 1292 |
| PspPPI | RGGWCCY | 1 cut(s) | 1292 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1269, 1301 |
| PstI | CTGCAG | 4 cut(s) | 1026, 1147, 1468, 1687 |
| PsuI | RGATCY | 3 cut(s) | 1247, 1679, 1695 |
| RsaI | GTAC | 1 cut(s) | 1551 |
| RsaNI | GTAC | 1 cut(s) | 1550 |
| RseI | CAYNNNNRTG | 3 cut(s) | 165, 326, 1581 |
| SacI | GAGCTC | 1 cut(s) | 1713 |
| SaqAI | TTAA | 8 cut(s) | 62, 171, 462, 474, 912, 977, 986, 1031 |
| SatI | GCNGC | 6 cut(s) | 154, 659, 672, 1053, 1364, 1686 |
| Sau3AI | GATC | 6 cut(s) | 651, 1176, 1247, 1417, 1679, 1695 |
| Sau96I | GGNCC | 1 cut(s) | 1292 |
| SchI | GAGTC | 1 cut(s) | 311 |
| ScrFI | CCNGG | 3 cut(s) | 561, 691, 1372 |
| SduI | GDGCHC | 2 cut(s) | 1015, 1713 |
| SfaNI | GCATC | 1 cut(s) | 1501 |
| SfcI | CTRYAG | 7 cut(s) | 148, 744, 1022, 1143, 1464, 1683, 1736 |
| SinI | GGWCC | 1 cut(s) | 1292 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 165, 326, 1581 |
| SmlI | CTYRAG | 1 cut(s) | 49 |
| SmoI | CTYRAG | 1 cut(s) | 49 |
| Sse9I | AATT | 8 cut(s) | 370, 549, 733, 902, 930, 1194, 1299, 1344 |
| SsiI | CCGC | 1 cut(s) | 763 |
| SspI | AATATT | 2 cut(s) | 975, 1187 |
| SspMI | CTAG | 3 cut(s) | 1266, 1505, 1731 |
| SstI | GAGCTC | 1 cut(s) | 1713 |
| StyD4I | CCNGG | 3 cut(s) | 559, 689, 1370 |
| StyI | CCWWGG | 2 cut(s) | 119, 306 |
| TaaI | ACNGT | 3 cut(s) | 230, 748, 1583 |
| TaiI | ACGT | 1 cut(s) | 1617 |
| TaqI | TCGA | 2 cut(s) | 300, 881 |
| TasI | AATT | 8 cut(s) | 370, 549, 733, 902, 930, 1194, 1299, 1344 |
| TfiI | GAWTC | 3 cut(s) | 144, 251, 578 |
| Tru1I | TTAA | 8 cut(s) | 62, 171, 462, 474, 912, 977, 986, 1031 |
| Tru9I | TTAA | 8 cut(s) | 62, 171, 462, 474, 912, 977, 986, 1031 |
| TscAI | CASTG | 8 cut(s) | 187, 235, 454, 654, 673, 753, 1560, 1588 |
| TseFI | GTSAC | 2 cut(s) | 182, 946 |
| TseI | GCWGC | 6 cut(s) | 153, 658, 671, 1052, 1363, 1685 |
| Tsp45I | GTSAC | 2 cut(s) | 182, 946 |
| TspDTI | ATGAA | 8 cut(s) | 199, 449, 525, 675, 821, 911, 1082, 1548 |
| TspGWI | ACGGA | 1 cut(s) | 1413 |
| TspRI | CASTG | 8 cut(s) | 187, 235, 454, 654, 673, 753, 1560, 1588 |
| VpaK11BI | GGWCC | 1 cut(s) | 1292 |
| XapI | RAATTY | 2 cut(s) | 733, 902 |
| XbaI | TCTAGA | 1 cut(s) | 1730 |
| XceI | RCATGY | 2 cut(s) | 492, 1219 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 394 |
| XmiI | GTMKAC | 1 cut(s) | 378 |
| XspI | CTAG | 3 cut(s) | 1266, 1505, 1731 |
| Zsp2I | ATGCAT | 1 cut(s) | 490 |