4-coumarate--CoA ligase-like
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G19010 |
| fragaria_vesca | FvH4_5g23550 |
| malus_domestica | MD14G1050700.v1.1 |
| prunus_persica | Prupe.7G085200_v2.0.a1 Prupe.8G160600_v2.0.a1 |
| pyrus_communis | pycom12g04570 pycom14g04200 |
| rosa_chinensis | RchiOBHm_Chr3g0478721 RchiOBHm_Chr7g0212861 |
| rosa_laevigata | RLG00000002864 RLG00000023630 |
| rosa_multiflora | Rmu_sc0000394.1_g000050 Rmu_sc0001519.1_g000013 |
| rosa_roxburghii | Rroxscaffold_3G00246500 Rroxscaffold_6G00403160 |
| rosa_rugosa | Rorug03G0167300 Rorug03G0167400 Rorug07G0137100 |
| rosa_samantha | Rh3AG219500 Rh3BG251200 Rh3CG248100 Rh3CG248200 Rh3DG244500 Rh7BG264300 Rh7CG287700 Rh7DG276800 |
| rosa_wichuraiana | Rw3G019720 Rw7G023220 Rw7G023340 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 848 |
| Acc36I | ACCTGC | 1 cut(s) | 982 |
| Acc65I | GGTACC | 1 cut(s) | 1504 |
| AccB1I | GGYRCC | 2 cut(s) | 1478, 1504 |
| AccII | CGCG | 1 cut(s) | 1113 |
| AciI | CCGC | 3 cut(s) | 626, 718, 1113 |
| AclWI | GGATC | 3 cut(s) | 1197, 1210, 1645 |
| AcsI | RAATTY | 3 cut(s) | 581, 857, 1672 |
| AdeI | CACNNNGTG | 1 cut(s) | 299 |
| AfaI | GTAC | 1 cut(s) | 1506 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 95, 216, 1660 |
| AflIII | ACRYGT | 1 cut(s) | 1363 |
| AgsI | TTSAA | 8 cut(s) | 537, 597, 754, 1120, 1149, 1254, 1273, 1626 |
| AjnI | CCWGG | 1 cut(s) | 514 |
| Alw21I | GWGCWC | 1 cut(s) | 1668 |
| Alw26I | GTCTC | 3 cut(s) | 163, 980, 1085 |
| AlwI | GGATC | 3 cut(s) | 1197, 1210, 1645 |
| AoxI | GGCC | 4 cut(s) | 264, 271, 599, 1047 |
| ApeKI | GCWGC | 4 cut(s) | 613, 1007, 1318, 1640 |
| ApoI | RAATTY | 3 cut(s) | 581, 857, 1672 |
| AseI | ATTAAT | 1 cut(s) | 867 |
| Asp718I | GGTACC | 1 cut(s) | 1504 |
| AspS9I | GGNCC | 3 cut(s) | 1048, 1247, 1600 |
| AsuHPI | GGTGA | 3 cut(s) | 78, 311, 1241 |
| AvaII | GGWCC | 2 cut(s) | 1247, 1600 |
| BaeGI | GKGCMC | 1 cut(s) | 970 |
| BamHI | GGATCC | 1 cut(s) | 1202 |
| BanI | GGYRCC | 2 cut(s) | 1478, 1504 |
| BanII | GRGCYC | 1 cut(s) | 1668 |
| BbsI | GAAGAC | 1 cut(s) | 1041 |
| Bbv12I | GWGCWC | 1 cut(s) | 1668 |
| BbvI | GCAGC | 4 cut(s) | 625, 1019, 1305, 1652 |
| BccI | CCATC | 1 cut(s) | 1304 |
| BciT130I | CCWGG | 1 cut(s) | 516 |
| BciVI | GTATCC | 1 cut(s) | 1349 |
| BclI | TGATCA | 1 cut(s) | 606 |
| BcoDI | GTCTC | 3 cut(s) | 163, 980, 1085 |
| BfaI | CTAG | 3 cut(s) | 1221, 1460, 1686 |
| BfmI | CTRYAG | 4 cut(s) | 699, 1098, 1638, 1691 |
| BfuAI | ACCTGC | 1 cut(s) | 982 |
| BfuI | GTATCC | 1 cut(s) | 1349 |
| BglII | AGATCT | 1 cut(s) | 1634 |
| BisI | GCNGC | 5 cut(s) | 614, 627, 1008, 1319, 1641 |
| BlsI | GCNGC | 5 cut(s) | 615, 628, 1009, 1320, 1642 |
| Bme1390I | CCNGG | 1 cut(s) | 516 |
| Bme18I | GGWCC | 2 cut(s) | 1247, 1600 |
| BmgT120I | GGNCC | 3 cut(s) | 1048, 1247, 1600 |
| BmiI | GGNNCC | 3 cut(s) | 1204, 1480, 1506 |
| BmrFI | CCNGG | 1 cut(s) | 516 |
| BmrI | ACTGGG | 3 cut(s) | 195, 908, 1335 |
| BmsI | GCATC | 1 cut(s) | 1456 |
| BmuI | ACTGGG | 3 cut(s) | 195, 908, 1335 |
| BpiI | GAAGAC | 1 cut(s) | 1041 |
| BpmI | CTGGAG | 2 cut(s) | 962, 1200 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1667 |
| Bsa29I | ATCGAT | 1 cut(s) | 204 |
| BsaJI | CCNNGG | 2 cut(s) | 74, 261 |
| BsaWI | WCCGGW | 1 cut(s) | 1199 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 960, 990 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 95, 216, 1660 |
| Bse1I | ACTGG | 6 cut(s) | 190, 602, 658, 914, 1330, 1508 |
| Bse3DI | GCAATG | 1 cut(s) | 445 |
| BseBI | CCWGG | 1 cut(s) | 516 |
| BseCI | ATCGAT | 1 cut(s) | 204 |
| BseDI | CCNNGG | 2 cut(s) | 74, 261 |
| BseGI | GGATG | 3 cut(s) | 70, 964, 1447 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 95, 216, 1660 |
| BseMI | GCAATG | 1 cut(s) | 445 |
| BseMII | CTCAG | 4 cut(s) | 1080, 1443, 1562, 1681 |
| BseNI | ACTGG | 6 cut(s) | 190, 602, 658, 914, 1330, 1508 |
| BseSI | GKGCMC | 1 cut(s) | 970 |
| BseXI | GCAGC | 4 cut(s) | 625, 1019, 1305, 1652 |
| Bsh1236I | CGCG | 1 cut(s) | 1113 |
| BshFI | GGCC | 4 cut(s) | 266, 273, 601, 1049 |
| BshNI | GGYRCC | 2 cut(s) | 1478, 1504 |
| BshVI | ATCGAT | 1 cut(s) | 204 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1668 |
| BsiSI | CCGG | 1 cut(s) | 1200 |
| BslFI | GGGAC | 2 cut(s) | 661, 1343 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 95, 216, 1660 |
| BsmAI | GTCTC | 3 cut(s) | 163, 980, 1085 |
| BsmBI | CGTCTC | 1 cut(s) | 1085 |
| BsmFI | GGGAC | 2 cut(s) | 661, 1343 |
| BsnI | GGCC | 4 cut(s) | 266, 273, 601, 1049 |
| Bsp1286I | GDGCHC | 2 cut(s) | 970, 1668 |
| Bsp143I | GATC | 8 cut(s) | 201, 414, 586, 606, 1202, 1372, 1634, 1650 |
| Bsp19I | CCATGG | 1 cut(s) | 261 |
| BspACI | CCGC | 3 cut(s) | 626, 718, 1113 |
| BspANI | GGCC | 4 cut(s) | 266, 273, 601, 1049 |
| BspCNI | CTCAG | 4 cut(s) | 1081, 1444, 1561, 1680 |
| BspDI | ATCGAT | 1 cut(s) | 204 |
| BspFNI | CGCG | 1 cut(s) | 1113 |
| BspLI | GGNNCC | 3 cut(s) | 1204, 1480, 1506 |
| BspMAI | CTGCAG | 2 cut(s) | 1102, 1642 |
| BspMI | ACCTGC | 1 cut(s) | 982 |
| BspPI | GGATC | 3 cut(s) | 1197, 1210, 1645 |
| BspT107I | GGYRCC | 2 cut(s) | 1478, 1504 |
| BsrDI | GCAATG | 1 cut(s) | 445 |
| BsrI | ACTGG | 6 cut(s) | 190, 602, 658, 914, 1330, 1508 |
| BssECI | CCNNGG | 2 cut(s) | 74, 261 |
| BssMI | GATC | 8 cut(s) | 201, 414, 586, 606, 1202, 1372, 1634, 1650 |
| BssT1I | CCWWGG | 2 cut(s) | 74, 261 |
| Bst2UI | CCWGG | 1 cut(s) | 516 |
| Bst4CI | ACNGT | 6 cut(s) | 549, 703, 974, 1236, 1538, 1692 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 449 |
| BstC8I | GCNNGC | 2 cut(s) | 486, 1176 |
| BstDEI | CTNAG | 5 cut(s) | 398, 1089, 1452, 1548, 1667 |
| BstDSI | CCRYGG | 1 cut(s) | 261 |
| BstF5I | GGATG | 3 cut(s) | 70, 964, 1447 |
| BstFNI | CGCG | 1 cut(s) | 1113 |
| BstKTI | GATC | 8 cut(s) | 204, 417, 589, 609, 1205, 1375, 1637, 1653 |
| BstMAI | GTCTC | 3 cut(s) | 163, 980, 1085 |
| BstMBI | GATC | 8 cut(s) | 201, 414, 586, 606, 1202, 1372, 1634, 1650 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 319, 449, 715 |
| BstNI | CCWGG | 1 cut(s) | 516 |
| BstNSI | RCATGY | 3 cut(s) | 447, 1174, 1367 |
| BstSCI | CCNGG | 1 cut(s) | 514 |
| BstSFI | CTRYAG | 4 cut(s) | 699, 1098, 1638, 1691 |
| BstSLI | GKGCMC | 1 cut(s) | 970 |
| BstUI | CGCG | 1 cut(s) | 1113 |
| BstV1I | GCAGC | 4 cut(s) | 625, 1019, 1305, 1652 |
| BstV2I | GAAGAC | 1 cut(s) | 1041 |
| BstX2I | RGATCY | 3 cut(s) | 1202, 1634, 1650 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 262 |
| BstYI | RGATCY | 3 cut(s) | 1202, 1634, 1650 |
| Bsu15I | ATCGAT | 1 cut(s) | 204 |
| BsuI | GTATCC | 1 cut(s) | 1349 |
| BsuRI | GGCC | 4 cut(s) | 266, 273, 601, 1049 |
| BsuTUI | ATCGAT | 1 cut(s) | 204 |
| BtgI | CCRYGG | 1 cut(s) | 261 |
| BtsCI | GGATG | 3 cut(s) | 70, 964, 1447 |
| BtsI | GCAGTG | 1 cut(s) | 409 |
| BtsIMutI | CAGTG | 5 cut(s) | 183, 409, 609, 1515, 1543 |
| BveI | ACCTGC | 1 cut(s) | 982 |
| Cac8I | GCNNGC | 2 cut(s) | 486, 1176 |
| Cfr13I | GGNCC | 3 cut(s) | 1048, 1247, 1600 |
| ClaI | ATCGAT | 1 cut(s) | 204 |
| Csp6I | GTAC | 1 cut(s) | 1505 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 912, 947 |
| CviQI | GTAC | 1 cut(s) | 1505 |
| DdeI | CTNAG | 5 cut(s) | 398, 1089, 1452, 1548, 1667 |
| DpnI | GATC | 8 cut(s) | 203, 416, 588, 608, 1204, 1374, 1636, 1652 |
| DpnII | GATC | 8 cut(s) | 201, 414, 586, 606, 1202, 1372, 1634, 1650 |
| DraI | TTTAAA | 1 cut(s) | 987 |
| DraIII | CACNNNGTG | 1 cut(s) | 299 |
| Ecl136II | GAGCTC | 1 cut(s) | 1666 |
| Eco130I | CCWWGG | 2 cut(s) | 74, 261 |
| Eco24I | GRGCYC | 1 cut(s) | 1668 |
| Eco32I | GATATC | 1 cut(s) | 1558 |
| Eco47I | GGWCC | 2 cut(s) | 1247, 1600 |
| Eco53kI | GAGCTC | 1 cut(s) | 1666 |
| EcoICRI | GAGCTC | 1 cut(s) | 1666 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1048, 1247 |
| EcoRII | CCWGG | 1 cut(s) | 514 |
| EcoRV | GATATC | 1 cut(s) | 1558 |
| EcoT14I | CCWWGG | 2 cut(s) | 74, 261 |
| EcoT22I | ATGCAT | 1 cut(s) | 445 |
| EcoT38I | GRGCYC | 1 cut(s) | 1668 |
| ErhI | CCWWGG | 2 cut(s) | 74, 261 |
| Esp3I | CGTCTC | 1 cut(s) | 1085 |
| FaqI | GGGAC | 2 cut(s) | 661, 1343 |
| FbaI | TGATCA | 1 cut(s) | 606 |
| Fnu4HI | GCNGC | 5 cut(s) | 614, 627, 1008, 1319, 1641 |
| FokI | GGATG | 3 cut(s) | 57, 971, 1434 |
| FriOI | GRGCYC | 1 cut(s) | 1668 |
| Fsp4HI | GCNGC | 5 cut(s) | 614, 627, 1008, 1319, 1641 |
| FspBI | CTAG | 3 cut(s) | 1221, 1460, 1686 |
| GluI | GCNGC | 5 cut(s) | 614, 627, 1008, 1319, 1641 |
| GsuI | CTGGAG | 2 cut(s) | 962, 1200 |
| HaeIII | GGCC | 4 cut(s) | 266, 273, 601, 1049 |
| HapII | CCGG | 1 cut(s) | 1200 |
| HincII | GTYRAC | 1 cut(s) | 1296 |
| HindII | GTYRAC | 1 cut(s) | 1296 |
| HinfI | GANTC | 6 cut(s) | 44, 99, 127, 206, 533, 688 |
| HpaII | CCGG | 1 cut(s) | 1200 |
| HphI | GGTGA | 3 cut(s) | 78, 311, 1241 |
| Hpy166II | GTNNAC | 5 cut(s) | 334, 1232, 1296, 1541, 1617 |
| Hpy188I | TCNGA | 3 cut(s) | 1410, 1604, 1658 |
| Hpy188III | TCNNGA | 8 cut(s) | 149, 418, 979, 1451, 1525, 1550, 1669, 1686 |
| Hpy8I | GTNNAC | 5 cut(s) | 334, 1232, 1296, 1541, 1617 |
| HpyAV | CCTTC | 4 cut(s) | 1061, 1260, 1591, 1653 |
| HpyCH4III | ACNGT | 6 cut(s) | 549, 703, 974, 1236, 1538, 1692 |
| HpyCH4IV | ACGT | 1 cut(s) | 1569 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 319, 449, 715 |
| HpyF3I | CTNAG | 5 cut(s) | 398, 1089, 1452, 1548, 1667 |
| HpySE526I | ACGT | 1 cut(s) | 1569 |
| KpnI | GGTACC | 1 cut(s) | 1508 |
| Ksp22I | TGATCA | 1 cut(s) | 606 |
| Kzo9I | GATC | 8 cut(s) | 201, 414, 586, 606, 1202, 1372, 1634, 1650 |
| LmnI | GCTCC | 5 cut(s) | 1004, 1015, 1168, 1420, 1663 |
| Lsp1109I | GCAGC | 4 cut(s) | 625, 1019, 1305, 1652 |
| LweI | GCATC | 1 cut(s) | 1456 |
| MaeI | CTAG | 3 cut(s) | 1221, 1460, 1686 |
| MaeII | ACGT | 1 cut(s) | 1569 |
| MaeIII | GTNAC | 5 cut(s) | 379, 901, 1239, 1265, 1471 |
| MalI | GATC | 8 cut(s) | 203, 416, 588, 608, 1204, 1374, 1636, 1652 |
| MboI | GATC | 8 cut(s) | 201, 414, 586, 606, 1202, 1372, 1634, 1650 |
| MboII | GAAGA | 6 cut(s) | 766, 865, 1046, 1137, 1565, 1660 |
| MfeI | CAATTG | 4 cut(s) | 504, 885, 1149, 1299 |
| MflI | RGATCY | 3 cut(s) | 1202, 1634, 1650 |
| MhlI | GDGCHC | 2 cut(s) | 970, 1668 |
| MmeI | TCCRAC | 3 cut(s) | 510, 796, 1447 |
| Mph1103I | ATGCAT | 1 cut(s) | 445 |
| MseI | TTAA | 6 cut(s) | 26, 429, 573, 867, 941, 986 |
| MslI | CAYNNNNRTG | 3 cut(s) | 120, 1368, 1536 |
| MspI | CCGG | 1 cut(s) | 1200 |
| MspR9I | CCNGG | 1 cut(s) | 516 |
| MunI | CAATTG | 4 cut(s) | 504, 885, 1149, 1299 |
| MvaI | CCWGG | 1 cut(s) | 516 |
| MvnI | CGCG | 1 cut(s) | 1113 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 319, 449, 715 |
| NcoI | CCATGG | 1 cut(s) | 261 |
| NdeII | GATC | 8 cut(s) | 201, 414, 586, 606, 1202, 1372, 1634, 1650 |
| NlaIV | GGNNCC | 3 cut(s) | 1204, 1480, 1506 |
| NsiI | ATGCAT | 1 cut(s) | 445 |
| NspI | RCATGY | 3 cut(s) | 447, 1174, 1367 |
| PciI | ACATGT | 1 cut(s) | 1363 |
| PfeI | GAWTC | 6 cut(s) | 44, 99, 127, 206, 533, 688 |
| PflFI | GACNNNGTC | 1 cut(s) | 256 |
| PfoI | TCCNGGA | 1 cut(s) | 514 |
| PkrI | GCNGC | 5 cut(s) | 615, 628, 1009, 1320, 1642 |
| PpuMI | RGGWCCY | 1 cut(s) | 1247 |
| PscI | ACATGT | 1 cut(s) | 1363 |
| PshBI | ATTAAT | 1 cut(s) | 867 |
| PsiI | TTATAA | 1 cut(s) | 848 |
| Psp124BI | GAGCTC | 1 cut(s) | 1668 |
| Psp5II | RGGWCCY | 1 cut(s) | 1247 |
| Psp6I | CCWGG | 1 cut(s) | 514 |
| PspGI | CCWGG | 1 cut(s) | 514 |
| PspN4I | GGNNCC | 3 cut(s) | 1204, 1480, 1506 |
| PspPI | GGNCC | 3 cut(s) | 1048, 1247, 1600 |
| PspPPI | RGGWCCY | 1 cut(s) | 1247 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1224, 1256 |
| PstI | CTGCAG | 2 cut(s) | 1102, 1642 |
| PsuI | RGATCY | 3 cut(s) | 1202, 1634, 1650 |
| PsyI | GACNNNGTC | 1 cut(s) | 256 |
| RsaI | GTAC | 1 cut(s) | 1506 |
| RsaNI | GTAC | 1 cut(s) | 1505 |
| RseI | CAYNNNNRTG | 3 cut(s) | 120, 1368, 1536 |
| SacI | GAGCTC | 1 cut(s) | 1668 |
| SaqAI | TTAA | 6 cut(s) | 26, 429, 573, 867, 941, 986 |
| SatI | GCNGC | 5 cut(s) | 614, 627, 1008, 1319, 1641 |
| Sau3AI | GATC | 8 cut(s) | 201, 414, 586, 606, 1202, 1372, 1634, 1650 |
| Sau96I | GGNCC | 3 cut(s) | 1048, 1247, 1600 |
| ScrFI | CCNGG | 1 cut(s) | 516 |
| SduI | GDGCHC | 2 cut(s) | 970, 1668 |
| SfaNI | GCATC | 1 cut(s) | 1456 |
| SfcI | CTRYAG | 4 cut(s) | 699, 1098, 1638, 1691 |
| SinI | GGWCC | 2 cut(s) | 1247, 1600 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 120, 1368, 1536 |
| SmlI | CTYRAG | 1 cut(s) | 13 |
| SmoI | CTYRAG | 1 cut(s) | 13 |
| SsiI | CCGC | 3 cut(s) | 626, 718, 1113 |
| SspI | AATATT | 2 cut(s) | 930, 1142 |
| SspMI | CTAG | 3 cut(s) | 1221, 1460, 1686 |
| SstI | GAGCTC | 1 cut(s) | 1668 |
| StyD4I | CCNGG | 1 cut(s) | 514 |
| StyI | CCWWGG | 2 cut(s) | 74, 261 |
| TaaI | ACNGT | 6 cut(s) | 549, 703, 974, 1236, 1538, 1692 |
| TaiI | ACGT | 1 cut(s) | 1572 |
| TaqI | TCGA | 3 cut(s) | 204, 746, 836 |
| TauI | GCSGC | 1 cut(s) | 629 |
| TfiI | GAWTC | 6 cut(s) | 44, 99, 127, 206, 533, 688 |
| Tru1I | TTAA | 6 cut(s) | 26, 429, 573, 867, 941, 986 |
| Tru9I | TTAA | 6 cut(s) | 26, 429, 573, 867, 941, 986 |
| TscAI | CASTG | 5 cut(s) | 190, 409, 609, 1515, 1543 |
| TseI | GCWGC | 4 cut(s) | 613, 1007, 1318, 1640 |
| TspDTI | ATGAA | 8 cut(s) | 57, 154, 213, 404, 480, 866, 1037, 1274 |
| TspGWI | ACGGA | 1 cut(s) | 1368 |
| TspRI | CASTG | 5 cut(s) | 190, 409, 609, 1515, 1543 |
| Tth111I | GACNNNGTC | 1 cut(s) | 256 |
| VpaK11BI | GGWCC | 2 cut(s) | 1247, 1600 |
| VspI | ATTAAT | 1 cut(s) | 867 |
| XapI | RAATTY | 3 cut(s) | 581, 857, 1672 |
| XbaI | TCTAGA | 1 cut(s) | 1685 |
| XceI | RCATGY | 3 cut(s) | 447, 1174, 1367 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 349 |
| XspI | CTAG | 3 cut(s) | 1221, 1460, 1686 |
| Zsp2I | ATGCAT | 1 cut(s) | 445 |