Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0005432

Physical Location & Seq

Genomic Coordinates Forward (+)

39617331 .. 39622663

Gene Structure 5333 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00246500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1827 bp

ATGGCTAAAACCTCAAGCAACAGCTTAAACCCTGAAAAGCATGAATCTTTGGCTACCCAACAACAACAACAACAACATCCATGGTGGTTTTCACCAGATACAGGAATCTACCACAGCAAACACCCTAATGTGAATCTCCCCACAGACCCTTTTCTTGATGTTGTCTCATTCATTTTCTCACACAAGCACACTGGGGTTTCAGCTTTGATTGATTCCTCATCTGGGTTTTCAATATCTTACTCAAAGCTCTATTCTTTGACCAAGTCCATGGCCTCTGGCCTCAACAAAATGGGTGTTTCACAAGGTGATGTTGTTCTGCTTCTTTTGCCTAATTCTGTTTACTATCCCATTGTTTTCTTGGCTGTTTTGTATATTGGTGCTGTTGTTACAACCATGAACCCTCTGAGCAGTGTGGTAGAGATCAAGAAACAGATTAAGGATTGCAATGCGTGTTTTGCTTTTACTGGATATGAAAATGTTGATAAATTGCAAGCATTGGGTATTCCTGCAATTGCAGTTCCAGGAAATGTAGTGTTGGATTCAAATAAAGAACTGTTTTCAGTCTTTTATGAGCTTGTTAATAGTGAATCTGATTTGGCTTCAAGGCCAGTGATCAAGCAGCAAGATACTGCGGCGATATTGTATTCGTCAGGGACTACTGGTGTGAGTAAAGGTGTTTTGCTAACTCATGGGAATCTCATAGCTACAGTTGAGCTTTTTGTGCGGTTTGAGGCTTCACAATATGAGTATTCGAGCTTGAAGAATGTGTATTTATCTGTTCTGCCATTGTTTCACATATACGGGTTGGCACTTATAGTGGTTGGATTATTGTCTTTGGGGTCGAGCATTGTTATAATGAAGAAATTTGATGTTAATGAGGTGGTCAAGGCAATTGATAGGTATAAAGTAACGCACTTCCCAGTTGTTCCACCAATATTGACAGCATTAACAAAAATAGTAGAGGATGTTGGGGCACACAGTCTCCAGAGTTTAAAGCAGGTTTCTTGTGGAGCAGCTCCTTTGAGCATGAAACTCATAGAAGACTTCGTTCAGGCCCTTCCTCATGTTGATTTTATTCAGGGATATGGCATGACTGAGACGACTGCAGTAGGAACTCGCGGTTTCAATACTGAAAAGATTAGGAAATATTCTTCAATTGGACTTTTAGCTCCAAACATGCAAGCTAAAGTGGTAGATTGGAATACCGGATCCTTTTTGCCTCCAGCTAGTATTGGTGAACTGTGGTTACGAGGACCTTCAATTATGAGAGGTTACTTGAATAATGCAAGGGCAACTATGTCAACAATTGATAATGATGGTTGGCTGCATACTGGGGACATCAGTTATTTTGATGAGGACGGATACTTACATGTATGTGATCGCATAAAGGAGATTATCAAATACAAGGGATTTCAGATTGCTCCTGCTGATTTAGAAGCTGTGTTGATTTCGCATCCTGAGATACTAGATGTCGGAGTTACAGGTGCCACTGATGAGGAATGTGGAGAGATACCAGTGGCATTTGTGGTCAGGAAGCATGACAGTGAACTTTCTCAGGAAGATATCATGGATTACGTTGCCCAACAGGTTTCTCCACACAAGAAGGTCCGAAAGTTAATTAATGGCGTCATCTCTGTGTCGCCTGCAAAGAAGGGCCAGGTCGGTCGCCCTCCTGGTCGGAAAAACAATCCTAAACCTGAGGGGCTGAAGCTTAGTGAAGAGGAAGAAGAGGGCTGCAAAGAACTTGTGCATTTTGATGTCAGTGATTCATGCAAACGTGTTAGAGAGGGTGATGAAGACATATCAAAAGCTTGCTTCCCATATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0006732 GO:0006733 GO:0006743 GO:0006744 GO:0008150 GO:0008152 GO:0009058 GO:0009108 GO:0009987 GO:0016405 GO:0016874 GO:0016877 GO:0042180 GO:0042181 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044249 GO:0044281 GO:0044283 GO:0044424 GO:0044444 GO:0044464 GO:0051186 GO:0051188 GO:0071704 GO:1901576 GO:1901661 GO:1901663

KEGG Pathways

Metabolic & Signaling

ko00130 ko00360 ko00940 ko01100 ko01110 map00130 map00360 map00940 map01100 map01110

Pfam Domains

Protein Families

AMP-binding AMP-binding_C

Protein Analysis

608

Amino Acids

66.71

Weight (kDa)

5.89

Isoelectric Point (pI)

38.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AMP-binding	PF00501	63 - 426	1e-87	AMP-binding enzyme
AMP-binding_C	PF13193	478 - 539	1.2e-12	AMP-binding enzyme C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005432)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G19010
fragaria_vesca	FvH4_5g23550
malus_domestica	MD14G1050700.v1.1
prunus_persica	Prupe.7G085200_v2.0.a1 Prupe.8G160600_v2.0.a1
pyrus_communis	pycom12g04570 pycom14g04200
rosa_chinensis	RchiOBHm_Chr3g0478721 RchiOBHm_Chr7g0212861
rosa_laevigata	RLG00000002864 RLG00000023630
rosa_multiflora	Rmu_sc0000394.1_g000050 Rmu_sc0001519.1_g000013
rosa_roxburghii	Rroxscaffold_3G00246500 Rroxscaffold_6G00403160
rosa_rugosa	Rorug03G0167300 Rorug03G0167400 Rorug07G0137100
rosa_samantha	Rh3AG219500 Rh3BG251200 Rh3CG248100 Rh3CG248200 Rh3DG244500 Rh7BG264300 Rh7CG287700 Rh7DG276800
rosa_wichuraiana	Rw3G019720 Rw7G023220 Rw7G023340

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	854
Acc36I	ACCTGC	1 cut(s)	988
AccB1I	GGYRCC	1 cut(s)	1484
AccII	CGCG	1 cut(s)	1119
AciI	CCGC	3 cut(s)	632, 724, 1119
AclWI	GGATC	2 cut(s)	1203, 1216
AcsI	RAATTY	1 cut(s)	863
AcuI	CTGAAG	1 cut(s)	1727
AcyI	GRCGYC	1 cut(s)	1626
AdeI	CACNNNGTG	1 cut(s)	305
AfiI	CCNNNNNNNGG	2 cut(s)	101, 222
AflIII	ACRYGT	2 cut(s)	1369, 1777
AgsI	TTSAA	8 cut(s)	231, 543, 603, 760, 1126, 1155, 1260, 1279
AjnI	CCWGG	3 cut(s)	520, 1656, 1672
Alw26I	GTCTC	3 cut(s)	169, 986, 1091
AlwI	GGATC	2 cut(s)	1203, 1216
AoxI	GGCC	5 cut(s)	270, 277, 605, 1053, 1654
ApeKI	GCWGC	4 cut(s)	619, 1013, 1324, 1734
ApoI	RAATTY	1 cut(s)	863
AseI	ATTAAT	1 cut(s)	1620
AspS9I	GGNCC	4 cut(s)	1054, 1253, 1606, 1654
AsuHPI	GGTGA	4 cut(s)	84, 317, 1247, 1802
AvaII	GGWCC	2 cut(s)	1253, 1606
AxyI	CCTNAGG	1 cut(s)	1698
BaeGI	GKGCMC	1 cut(s)	976
BamHI	GGATCC	1 cut(s)	1208
BanI	GGYRCC	1 cut(s)	1484
BbsI	GAAGAC	2 cut(s)	1047, 1803
BbvI	GCAGC	4 cut(s)	631, 1025, 1311, 1721
BccI	CCATC	1 cut(s)	1310
BciT130I	CCWGG	3 cut(s)	522, 1658, 1674
BciVI	GTATCC	1 cut(s)	1355
BclI	TGATCA	1 cut(s)	612
BcoDI	GTCTC	3 cut(s)	169, 986, 1091
BfaI	CTAG	2 cut(s)	1227, 1466
BfmI	CTRYAG	2 cut(s)	705, 1104
BfuAI	ACCTGC	1 cut(s)	988
BfuI	GTATCC	1 cut(s)	1355
BisI	GCNGC	5 cut(s)	620, 633, 1014, 1325, 1735
BlsI	GCNGC	5 cut(s)	621, 634, 1015, 1326, 1736
Bme1390I	CCNGG	3 cut(s)	522, 1658, 1674
Bme18I	GGWCC	2 cut(s)	1253, 1606
BmgT120I	GGNCC	4 cut(s)	1054, 1253, 1606, 1654
BmiI	GGNNCC	2 cut(s)	1210, 1486
BmrFI	CCNGG	3 cut(s)	522, 1658, 1674
BmrI	ACTGGG	3 cut(s)	201, 914, 1341
BmsI	GCATC	1 cut(s)	1462
BmuI	ACTGGG	3 cut(s)	201, 914, 1341
BpiI	GAAGAC	2 cut(s)	1047, 1803
BpmI	CTGGAG	2 cut(s)	968, 1206
BsaHI	GRCGYC	1 cut(s)	1626
BsaJI	CCNNGG	2 cut(s)	80, 267
BsaWI	WCCGGW	1 cut(s)	1205
BsaXI	ACNNNNNCTCC	2 cut(s)	966, 996
Bsc4I	CCNNNNNNNGG	2 cut(s)	101, 222
Bse1I	ACTGG	7 cut(s)	196, 469, 608, 664, 920, 1336, 1514
Bse21I	CCTNAGG	1 cut(s)	1698
Bse3DI	GCAATG	1 cut(s)	451
BseBI	CCWGG	3 cut(s)	522, 1658, 1674
BseDI	CCNNGG	2 cut(s)	80, 267
BseGI	GGATG	3 cut(s)	76, 970, 1453
BseLI	CCNNNNNNNGG	2 cut(s)	101, 222
BseMI	GCAATG	1 cut(s)	451
BseMII	CTCAG	5 cut(s)	395, 1086, 1449, 1568, 1689
BseNI	ACTGG	7 cut(s)	196, 469, 608, 664, 920, 1336, 1514
BseSI	GKGCMC	1 cut(s)	976
BseXI	GCAGC	4 cut(s)	631, 1025, 1311, 1721
Bsh1236I	CGCG	1 cut(s)	1119
Bsh1285I	CGRYCG	1 cut(s)	1666
BshFI	GGCC	5 cut(s)	272, 279, 607, 1055, 1656
BshNI	GGYRCC	1 cut(s)	1484
BsiEI	CGRYCG	1 cut(s)	1666
BsiSI	CCGG	1 cut(s)	1206
BslFI	GGGAC	2 cut(s)	667, 1349
BslI	CCNNNNNNNGG	2 cut(s)	101, 222
BsmAI	GTCTC	3 cut(s)	169, 986, 1091
BsmBI	CGTCTC	1 cut(s)	1091
BsmFI	GGGAC	2 cut(s)	667, 1349
BsnI	GGCC	5 cut(s)	272, 279, 607, 1055, 1656
Bsp1286I	GDGCHC	1 cut(s)	976
Bsp143I	GATC	4 cut(s)	420, 612, 1208, 1378
Bsp19I	CCATGG	2 cut(s)	80, 267
BspACI	CCGC	3 cut(s)	632, 724, 1119
BspANI	GGCC	5 cut(s)	272, 279, 607, 1055, 1656
BspCNI	CTCAG	5 cut(s)	396, 1087, 1450, 1567, 1690
BspFNI	CGCG	1 cut(s)	1119
BspLI	GGNNCC	2 cut(s)	1210, 1486
BspMAI	CTGCAG	1 cut(s)	1108
BspMI	ACCTGC	1 cut(s)	988
BspPI	GGATC	2 cut(s)	1203, 1216
BspT107I	GGYRCC	1 cut(s)	1484
BsrDI	GCAATG	1 cut(s)	451
BsrI	ACTGG	7 cut(s)	196, 469, 608, 664, 920, 1336, 1514
BssECI	CCNNGG	2 cut(s)	80, 267
BssMI	GATC	4 cut(s)	420, 612, 1208, 1378
BssNI	GRCGYC	1 cut(s)	1626
BssT1I	CCWWGG	2 cut(s)	80, 267
Bst2UI	CCWGG	3 cut(s)	522, 1658, 1674
Bst4CI	ACNGT	5 cut(s)	555, 709, 980, 1242, 1544
Bst6I	CTCTTC	2 cut(s)	1713, 1722
BstACI	GRCGYC	1 cut(s)	1626
BstC8I	GCNNGC	4 cut(s)	492, 1182, 1644, 1813
BstDEI	CTNAG	6 cut(s)	404, 1095, 1458, 1554, 1698, 1712
BstDSI	CCRYGG	2 cut(s)	80, 267
BstF5I	GGATG	3 cut(s)	76, 970, 1453
BstFNI	CGCG	1 cut(s)	1119
BstKTI	GATC	4 cut(s)	423, 615, 1211, 1381
BstMAI	GTCTC	3 cut(s)	169, 986, 1091
BstMBI	GATC	4 cut(s)	420, 612, 1208, 1378
BstMCI	CGRYCG	1 cut(s)	1666
BstMWI	GCNNNNNNNGC	3 cut(s)	325, 455, 721
BstNI	CCWGG	3 cut(s)	522, 1658, 1674
BstNSI	RCATGY	2 cut(s)	1180, 1373
BstSCI	CCNGG	3 cut(s)	520, 1656, 1672
BstSFI	CTRYAG	2 cut(s)	705, 1104
BstSLI	GKGCMC	1 cut(s)	976
BstUI	CGCG	1 cut(s)	1119
BstV1I	GCAGC	4 cut(s)	631, 1025, 1311, 1721
BstV2I	GAAGAC	2 cut(s)	1047, 1803
BstX2I	RGATCY	1 cut(s)	1208
BstXI	CCANNNNNNTGG	1 cut(s)	268
BstYI	RGATCY	1 cut(s)	1208
Bsu36I	CCTNAGG	1 cut(s)	1698
BsuI	GTATCC	1 cut(s)	1355
BsuRI	GGCC	5 cut(s)	272, 279, 607, 1055, 1656
BtgI	CCRYGG	2 cut(s)	80, 267
BtsCI	GGATG	3 cut(s)	76, 970, 1453
BtsI	GCAGTG	1 cut(s)	415
BtsIMutI	CAGTG	7 cut(s)	189, 415, 615, 1488, 1521, 1549, 1768
BveI	ACCTGC	1 cut(s)	988
Cac8I	GCNNGC	4 cut(s)	492, 1182, 1644, 1813
Cfr13I	GGNCC	4 cut(s)	1054, 1253, 1606, 1654
CseI	GACGC	1 cut(s)	1615
CspCI	CAANNNNNGTGG	2 cut(s)	918, 953
DdeI	CTNAG	6 cut(s)	404, 1095, 1458, 1554, 1698, 1712
DpnI	GATC	4 cut(s)	422, 614, 1210, 1380
DpnII	GATC	4 cut(s)	420, 612, 1208, 1378
DraI	TTTAAA	1 cut(s)	993
DraIII	CACNNNGTG	1 cut(s)	305
Eam1104I	CTCTTC	2 cut(s)	1713, 1722
EarI	CTCTTC	2 cut(s)	1713, 1722
Eco130I	CCWWGG	2 cut(s)	80, 267
Eco32I	GATATC	1 cut(s)	1564
Eco47I	GGWCC	2 cut(s)	1253, 1606
Eco57I	CTGAAG	1 cut(s)	1727
Eco81I	CCTNAGG	1 cut(s)	1698
EcoO109I	RGGNCCY	2 cut(s)	1054, 1253
EcoRII	CCWGG	3 cut(s)	520, 1656, 1672
EcoRV	GATATC	1 cut(s)	1564
EcoT14I	CCWWGG	2 cut(s)	80, 267
ErhI	CCWWGG	2 cut(s)	80, 267
Esp3I	CGTCTC	1 cut(s)	1091
FaqI	GGGAC	2 cut(s)	667, 1349
FbaI	TGATCA	1 cut(s)	612
Fnu4HI	GCNGC	5 cut(s)	620, 633, 1014, 1325, 1735
FokI	GGATG	3 cut(s)	63, 977, 1440
Fsp4HI	GCNGC	5 cut(s)	620, 633, 1014, 1325, 1735
FspBI	CTAG	2 cut(s)	1227, 1466
GluI	GCNGC	5 cut(s)	620, 633, 1014, 1325, 1735
GsuI	CTGGAG	2 cut(s)	968, 1206
HaeIII	GGCC	5 cut(s)	272, 279, 607, 1055, 1656
HapII	CCGG	1 cut(s)	1206
HgaI	GACGC	1 cut(s)	1615
Hin1I	GRCGYC	1 cut(s)	1626
HincII	GTYRAC	1 cut(s)	1302
HindII	GTYRAC	1 cut(s)	1302
HindIII	AAGCTT	2 cut(s)	1709, 1809
HinfI	GANTC	8 cut(s)	44, 105, 133, 212, 539, 587, 694, 1766
HpaII	CCGG	1 cut(s)	1206
HphI	GGTGA	4 cut(s)	84, 317, 1247, 1802
Hpy166II	GTNNAC	4 cut(s)	340, 1238, 1302, 1547
Hpy188I	TCNGA	6 cut(s)	405, 592, 1416, 1475, 1610, 1680
Hpy188III	TCNNGA	6 cut(s)	155, 424, 985, 1457, 1531, 1556
Hpy8I	GTNNAC	4 cut(s)	340, 1238, 1302, 1547
HpyAV	CCTTC	4 cut(s)	1067, 1266, 1597, 1645
HpyCH4III	ACNGT	5 cut(s)	555, 709, 980, 1242, 1544
HpyCH4IV	ACGT	2 cut(s)	1575, 1777
HpyF10VI	GCNNNNNNNGC	3 cut(s)	325, 455, 721
HpyF3I	CTNAG	6 cut(s)	404, 1095, 1458, 1554, 1698, 1712
HpySE526I	ACGT	2 cut(s)	1575, 1777
Hsp92I	GRCGYC	1 cut(s)	1626
Ksp22I	TGATCA	1 cut(s)	612
Kzo9I	GATC	4 cut(s)	420, 612, 1208, 1378
LmnI	GCTCC	4 cut(s)	1010, 1021, 1174, 1426
Lsp1109I	GCAGC	4 cut(s)	631, 1025, 1311, 1721
LweI	GCATC	1 cut(s)	1462
MaeI	CTAG	2 cut(s)	1227, 1466
MaeII	ACGT	2 cut(s)	1575, 1777
MaeIII	GTNAC	5 cut(s)	385, 907, 1245, 1271, 1477
MalI	GATC	4 cut(s)	422, 614, 1210, 1380
MboI	GATC	4 cut(s)	420, 612, 1208, 1378
MboII	GAAGA	9 cut(s)	772, 871, 1052, 1143, 1571, 1730, 1736, 1739, 1808
MfeI	CAATTG	4 cut(s)	510, 891, 1155, 1305
MflI	RGATCY	1 cut(s)	1208
MhlI	GDGCHC	1 cut(s)	976
MluCI	AATT	9 cut(s)	331, 485, 510, 863, 891, 1155, 1260, 1305, 1617
MmeI	TCCRAC	4 cut(s)	516, 802, 1453, 1658
MseI	TTAA	9 cut(s)	26, 435, 579, 873, 947, 992, 1616, 1620, 1825
MslI	CAYNNNNRTG	5 cut(s)	126, 1374, 1542, 1634, 1755
MspI	CCGG	1 cut(s)	1206
MspR9I	CCNGG	3 cut(s)	522, 1658, 1674
MunI	CAATTG	4 cut(s)	510, 891, 1155, 1305
MvaI	CCWGG	3 cut(s)	522, 1658, 1674
MvnI	CGCG	1 cut(s)	1119
MwoI	GCNNNNNNNGC	3 cut(s)	325, 455, 721
NcoI	CCATGG	2 cut(s)	80, 267
NdeII	GATC	4 cut(s)	420, 612, 1208, 1378
NlaIV	GGNNCC	2 cut(s)	1210, 1486
NspI	RCATGY	2 cut(s)	1180, 1373
PacI	TTAATTAA	1 cut(s)	1620
PciI	ACATGT	1 cut(s)	1369
PfeI	GAWTC	8 cut(s)	44, 105, 133, 212, 539, 587, 694, 1766
PflFI	GACNNNGTC	1 cut(s)	262
PfoI	TCCNGGA	1 cut(s)	520
PkrI	GCNGC	5 cut(s)	621, 634, 1015, 1326, 1736
PpuMI	RGGWCCY	1 cut(s)	1253
PscI	ACATGT	1 cut(s)	1369
PshBI	ATTAAT	1 cut(s)	1620
PsiI	TTATAA	1 cut(s)	854
Psp5II	RGGWCCY	1 cut(s)	1253
Psp6I	CCWGG	3 cut(s)	520, 1656, 1672
PspGI	CCWGG	3 cut(s)	520, 1656, 1672
PspN4I	GGNNCC	2 cut(s)	1210, 1486
PspPI	GGNCC	4 cut(s)	1054, 1253, 1606, 1654
PspPPI	RGGWCCY	1 cut(s)	1253
PsrI	GAACNNNNNNTAC	2 cut(s)	1230, 1262
PstI	CTGCAG	1 cut(s)	1108
PsuI	RGATCY	1 cut(s)	1208
PsyI	GACNNNGTC	1 cut(s)	262
RseI	CAYNNNNRTG	5 cut(s)	126, 1374, 1542, 1634, 1755
SaqAI	TTAA	9 cut(s)	26, 435, 579, 873, 947, 992, 1616, 1620, 1825
SatI	GCNGC	5 cut(s)	620, 633, 1014, 1325, 1735
Sau3AI	GATC	4 cut(s)	420, 612, 1208, 1378
Sau96I	GGNCC	4 cut(s)	1054, 1253, 1606, 1654
ScrFI	CCNGG	3 cut(s)	522, 1658, 1674
SduI	GDGCHC	1 cut(s)	976
SfaNI	GCATC	1 cut(s)	1462
SfcI	CTRYAG	2 cut(s)	705, 1104
SinI	GGWCC	2 cut(s)	1253, 1606
SmiMI	CAYNNNNRTG	5 cut(s)	126, 1374, 1542, 1634, 1755
SmlI	CTYRAG	1 cut(s)	13
SmoI	CTYRAG	1 cut(s)	13
Sse9I	AATT	9 cut(s)	331, 485, 510, 863, 891, 1155, 1260, 1305, 1617
SsiI	CCGC	3 cut(s)	632, 724, 1119
SspI	AATATT	2 cut(s)	936, 1148
SspMI	CTAG	2 cut(s)	1227, 1466
StyD4I	CCNGG	3 cut(s)	520, 1656, 1672
StyI	CCWWGG	2 cut(s)	80, 267
TaaI	ACNGT	5 cut(s)	555, 709, 980, 1242, 1544
TaiI	ACGT	2 cut(s)	1578, 1780
TaqI	TCGA	2 cut(s)	752, 842
TaqII	GACCGA	1 cut(s)	1652
TasI	AATT	9 cut(s)	331, 485, 510, 863, 891, 1155, 1260, 1305, 1617
TauI	GCSGC	1 cut(s)	635
TfiI	GAWTC	8 cut(s)	44, 105, 133, 212, 539, 587, 694, 1766
Tru1I	TTAA	9 cut(s)	26, 435, 579, 873, 947, 992, 1616, 1620, 1825
Tru9I	TTAA	9 cut(s)	26, 435, 579, 873, 947, 992, 1616, 1620, 1825
TscAI	CASTG	7 cut(s)	196, 415, 615, 1495, 1521, 1549, 1768
TseI	GCWGC	4 cut(s)	619, 1013, 1324, 1734
TspDTI	ATGAA	8 cut(s)	57, 160, 410, 486, 872, 1043, 1758, 1809
TspGWI	ACGGA	1 cut(s)	1374
TspRI	CASTG	7 cut(s)	196, 415, 615, 1495, 1521, 1549, 1768
Tth111I	GACNNNGTC	1 cut(s)	262
VpaK11BI	GGWCC	2 cut(s)	1253, 1606
VspI	ATTAAT	1 cut(s)	1620
XapI	RAATTY	1 cut(s)	863
XceI	RCATGY	2 cut(s)	1180, 1373
XcmI	CCANNNNNNNNNTGG	1 cut(s)	355
XspI	CTAG	2 cut(s)	1227, 1466

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.