Prupe.7G085200_v2.0.a1

4-coumarate--CoA ligase-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
12023177 .. 12025520
2344 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G085200.1

Sequence Viewer

Length: 1719 bp
ATGGCCACACCCTCAAACCCCAACTTCAACTCCCATATCTCAGGAAAACAAAGCATTCAGAACCAGAAAGCTTTAGCTGCAGAACAGTTTCCCTGGTGGTTTTCACCAGAAACGGGGATTTACCAAAGCAAACACCTTTCCATTGACCTCCCATCAGACCCTTTTCTTGATGTTGTCTCCTTCATTTTCTCATACCAGCATGATGGGGTTTCCTCAGCTCTCATTGGTTCCTCTTGTGGGTCTGCAATATCTTACTCACAGCTCTACTCTTCTGTCAAGTCCATGGCCTCTGGTCTCCAGCAAATGGGCATCTCACAAGGTGATGTTATTTTGCTTCTTTTGCCAAATTCCATTTACTATCCCATTGCTTTCTTGGGTGTTTTGTACCTTGGTGCTATTGTCACAACCATGAATCCCCTCAGCAGTGTAGCAGAAATCAAGAAACAGATTGCTGATACCAAAGCATGTCATGCTTTTACTGGACCTGAGAATGCTGATAAATTACAAGCATTGGGCATTCCTGCAATTCTGGTACCAGAAAATGCACTTTCGGGTTTGAAGGAGGACATTTTTTCGGTTTTTTATAAGCTTATTTATAGTAGGTTTGATTTGGCTCCAAGGCCAGTGATTAAGCAGCAAGACACTGCTGCAATAATGTATTCGTCCGGGACTACTGGTGTGAGCAAAGGTGTTATGCTAACACACAGGAATTGCATAGCTACAATTGCCCATTTTGTGCGTTTTGAGGCTTCACAGTATGAGGGTTCAAGCTTGGATAATGTGTATTTAGCTGTTCTGCCATTGTTTCATATCTACGGGTTGTCGCTTTTCGTGATGGGGTTGTTGTCTTTAGGATCTATAGTTGTTGTGATGAAGAGATTTGATGTCAATGAGGTGATCAGGGCAATTGATAGGTATAAAGTTACACACTTCCCAGTTGTTCCACCAGTATTGACAGCATTGACAACAAGAGCCAAGGATGGCTTGGCCCCTCATAGCCTCAAGAGTTTAAAGCAGGTTTCTTGTGGTGCAGCTCAGTTGAGCATGAAAACCATAGAGGACTTTGTTCAAACCCTTCCTGACATTGATCTCATTCAGGGCTACGGCATGACTGAGACCACTGCGGTAGGAACTCGCGGTTTCAACACCGAAAAGCTTAGGAAACCCTCTTCAATAGGGCTATTAGCTCCAAACATGCAAGCTAAAGTGGTGGACTGGGACACTGGATCCCCTCTGCCTCCAACAAGTACCGGTGAGCTATGGCTACACGGACCAGGGATTATGAAGGGCTACTTGAACAATGCCAACGCAACATTGTCAACAATTGATGAAGAGGGCTGGCTACACACTGGAGACATTGTGTTTTTTGATGAAGATGGATACTTACATCTACAAGACCGCTTGAAAGACGCGATCAAATACAAGGGCTTTCAGATTGCTCCTGCAGATTTAGAAGGTGTGCTGATCAACCATCCTGAGATACTTGATGTTGCTGTGGCAGGTGCCATGGATGAAGAAAGTGGAGAGGTGCCTGTGGCTTTTGTGGTGAGGAAGCACATAAGTGAACTAAACCATGATGCTGTCATGGATTTTGTGGCTGCACAGGTTGCTCCATACAAGAAAGTCAGGAAGGTGGTGTTTGTAGATTCAATTCCAAAGTCTCCAGCAGGGAAGATCCTAAGAAGGGAGCTCAGGAAGTCATTGAATTCTAGACTCTAG

Protein Analysis

573

Amino Acids

62.41

Weight (kDa)

6.32

Isoelectric Point (pI)

38.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 585
AarI CACCTGC 1 cut(s) 1490
Acc36I ACCTGC 2 cut(s) 1006, 1490
Acc65I GGTACC 1 cut(s) 532
AccB1I GGYRCC 3 cut(s) 532, 1502, 1528
AccB7I CCANNNNNTGG 1 cut(s) 304
AccII CGCG 2 cut(s) 1137, 1412
AciI CCGC 3 cut(s) 1124, 1137, 1399
AclWI GGATC 4 cut(s) 862, 1221, 1234, 1669
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 346, 1705
AdeI CACNNNGTG 1 cut(s) 320
AfaI GTAC 3 cut(s) 386, 534, 1249
AfiI CCNNNNNNNGG 4 cut(s) 113, 237, 304, 1684
AgeI ACCGGT 1 cut(s) 1250
AjnI CCWGG 2 cut(s) 92, 1273
AleI CACNNNNGTG 1 cut(s) 1560
Alw21I GWGCWC 1 cut(s) 1692
Alw26I GTCTC 5 cut(s) 181, 299, 1109, 1347, 1665
AlwI GGATC 4 cut(s) 862, 1221, 1234, 1669
AoxI GGCC 4 cut(s) 3, 285, 620, 987
ApeKI GCWGC 5 cut(s) 77, 634, 647, 1031, 1598
ApoI RAATTY 2 cut(s) 346, 1705
AsiGI ACCGGT 1 cut(s) 1250
Asp700I GAANNNNTTC 1 cut(s) 87
Asp718I GGTACC 1 cut(s) 532
AspS9I GGNCC 3 cut(s) 482, 988, 1271
AsuC2I CCSGG 1 cut(s) 667
AsuHPI GGTGA 5 cut(s) 96, 332, 907, 1265, 1558
AvaII GGWCC 2 cut(s) 482, 1271
BalI TGGCCA 1 cut(s) 5
BamHI GGATCC 1 cut(s) 1226
BanI GGYRCC 3 cut(s) 532, 1502, 1528
BanII GRGCYC 1 cut(s) 1692
Bbv12I GWGCWC 1 cut(s) 1692
BbvCI CCTCAGC 2 cut(s) 214, 419
BbvI GCAGC 5 cut(s) 64, 634, 646, 1043, 1585
BccI CCATC 6 cut(s) 160, 197, 829, 974, 1370, 1479
BceAI ACGGC 1 cut(s) 1120
BciT130I CCWGG 2 cut(s) 94, 1275
BciVI GTATCC 1 cut(s) 1373
BclI TGATCA 2 cut(s) 897, 1464
BcnI CCSGG 1 cut(s) 667
BcoDI GTCTC 5 cut(s) 181, 299, 1109, 1347, 1665
BfaI CTAG 2 cut(s) 1710, 1717
BfmI CTRYAG 3 cut(s) 78, 858, 1443
BfuAI ACCTGC 2 cut(s) 1006, 1490
BfuI GTATCC 1 cut(s) 1373
BisI GCNGC 5 cut(s) 78, 635, 648, 1032, 1599
BlsI GCNGC 5 cut(s) 79, 636, 649, 1033, 1600
Bme1390I CCNGG 3 cut(s) 94, 667, 1275
Bme18I GGWCC 2 cut(s) 482, 1271
BmgT120I GGNCC 3 cut(s) 482, 988, 1271
BmiI GGNNCC 7 cut(s) 229, 534, 615, 990, 1228, 1504, 1530
BmrFI CCNGG 3 cut(s) 94, 667, 1275
BmrI ACTGGG 2 cut(s) 929, 1225
BmsI GCATC 2 cut(s) 318, 1567
BmuI ACTGGG 2 cut(s) 929, 1225
BpmI CTGGAG 3 cut(s) 281, 1371, 1647
Bpu10I CCTNAGC 4 cut(s) 214, 419, 1157, 1691
BpuEI CTTGAG 1 cut(s) 986
BpuMI CCSGG 1 cut(s) 667
BsaI GGTCTC 2 cut(s) 299, 1109
BsaJI CCNNGG 7 cut(s) 92, 282, 388, 617, 975, 1274, 1506
BsaWI WCCGGW 1 cut(s) 1250
BsaXI ACNNNNNCTCC 4 cut(s) 14, 44, 1344, 1374
Bsc4I CCNNNNNNNGG 4 cut(s) 113, 237, 304, 1684
Bse118I RCCGGY 1 cut(s) 1250
Bse1I ACTGG 8 cut(s) 484, 623, 679, 935, 947, 1220, 1228, 1354
Bse3DI GCAATG 1 cut(s) 363
BseBI CCWGG 2 cut(s) 94, 1275
BseDI CCNNGG 7 cut(s) 92, 282, 388, 617, 975, 1274, 1506
BseGI GGATG 3 cut(s) 985, 1471, 1516
BseLI CCNNNNNNNGG 4 cut(s) 113, 237, 304, 1684
BseMI GCAATG 1 cut(s) 363
BseMII CTCAG 8 cut(s) 54, 228, 433, 477, 1049, 1104, 1467, 1705
BseNI ACTGG 8 cut(s) 484, 623, 679, 935, 947, 1220, 1228, 1354
BseXI GCAGC 5 cut(s) 64, 634, 646, 1043, 1585
BsgI GTGCAG 2 cut(s) 1050, 1584
Bsh1236I CGCG 2 cut(s) 1137, 1412
BshFI GGCC 4 cut(s) 5, 287, 622, 989
BshNI GGYRCC 3 cut(s) 532, 1502, 1528
BshTI ACCGGT 1 cut(s) 1250
BsiHKAI GWGCWC 1 cut(s) 1692
BsiSI CCGG 2 cut(s) 666, 1251
BslFI GGGAC 2 cut(s) 682, 1232
BslI CCNNNNNNNGG 4 cut(s) 113, 237, 304, 1684
BsmAI GTCTC 5 cut(s) 181, 299, 1109, 1347, 1665
BsmFI GGGAC 2 cut(s) 682, 1232
BsmI GAATGC 3 cut(s) 54, 496, 516
BsnI GGCC 4 cut(s) 5, 287, 622, 989
Bso31I GGTCTC 2 cut(s) 299, 1109
Bsp1286I GDGCHC 1 cut(s) 1692
Bsp143I GATC 7 cut(s) 854, 897, 1087, 1226, 1413, 1464, 1674
Bsp19I CCATGG 2 cut(s) 282, 1506
BspACI CCGC 3 cut(s) 1124, 1137, 1399
BspANI GGCC 4 cut(s) 5, 287, 622, 989
BspCNI CTCAG 8 cut(s) 53, 227, 432, 478, 1048, 1105, 1468, 1704
BspFNI CGCG 2 cut(s) 1137, 1412
BspLI GGNNCC 7 cut(s) 229, 534, 615, 990, 1228, 1504, 1530
BspMAI CTGCAG 2 cut(s) 82, 1447
BspMI ACCTGC 2 cut(s) 1006, 1490
BspPI GGATC 4 cut(s) 862, 1221, 1234, 1669
BspT107I GGYRCC 3 cut(s) 532, 1502, 1528
BspTNI GGTCTC 2 cut(s) 299, 1109
BsrDI GCAATG 1 cut(s) 363
BsrFI RCCGGY 1 cut(s) 1250
BsrI ACTGG 8 cut(s) 484, 623, 679, 935, 947, 1220, 1228, 1354
BssAI RCCGGY 1 cut(s) 1250
BssECI CCNNGG 7 cut(s) 92, 282, 388, 617, 975, 1274, 1506
BssMI GATC 7 cut(s) 854, 897, 1087, 1226, 1413, 1464, 1674
BssT1I CCWWGG 5 cut(s) 282, 388, 617, 975, 1506
Bst2UI CCWGG 2 cut(s) 94, 1275
Bst4CI ACNGT 2 cut(s) 87, 756
Bst6I CTCTTC 4 cut(s) 274, 869, 1174, 1326
BstAPI GCANNNNNTGC 2 cut(s) 470, 1607
BstC8I GCNNGC 2 cut(s) 1200, 1340
BstDSI CCRYGG 2 cut(s) 282, 1506
BstF5I GGATG 3 cut(s) 985, 1471, 1516
BstFNI CGCG 2 cut(s) 1137, 1412
BstKTI GATC 7 cut(s) 857, 900, 1090, 1229, 1416, 1467, 1677
BstMAI GTCTC 5 cut(s) 181, 299, 1109, 1347, 1665
BstMBI GATC 7 cut(s) 854, 897, 1087, 1226, 1413, 1464, 1674
BstMWI GCNNNNNNNGC 5 cut(s) 77, 340, 470, 725, 1607
BstNI CCWGG 2 cut(s) 94, 1275
BstNSI RCATGY 2 cut(s) 468, 1198
BstSCI CCNGG 3 cut(s) 92, 665, 1273
BstSFI CTRYAG 3 cut(s) 78, 858, 1443
BstUI CGCG 2 cut(s) 1137, 1412
BstV1I GCAGC 5 cut(s) 64, 634, 646, 1043, 1585
BstX2I RGATCY 3 cut(s) 854, 1226, 1674
BstXI CCANNNNNNTGG 1 cut(s) 203
BstYI RGATCY 3 cut(s) 854, 1226, 1674
BsuI GTATCC 1 cut(s) 1373
BsuRI GGCC 4 cut(s) 5, 287, 622, 989
BtgI CCRYGG 2 cut(s) 282, 1506
BtsCI GGATG 3 cut(s) 985, 1471, 1516
BtsI GCAGTG 3 cut(s) 430, 642, 1119
BtsIMutI CAGTG 6 cut(s) 430, 630, 642, 1119, 1221, 1347
BveI ACCTGC 2 cut(s) 1006, 1490
Cac8I GCNNGC 2 cut(s) 1200, 1340
Cfr10I RCCGGY 1 cut(s) 1250
Cfr13I GGNCC 3 cut(s) 482, 988, 1271
CseI GACGC 1 cut(s) 1418
Csp6I GTAC 3 cut(s) 385, 533, 1248
CspAI ACCGGT 1 cut(s) 1250
CspCI CAANNNNNGTGG 2 cut(s) 933, 968
CviQI GTAC 3 cut(s) 385, 533, 1248
DpnI GATC 7 cut(s) 856, 899, 1089, 1228, 1415, 1466, 1676
DpnII GATC 7 cut(s) 854, 897, 1087, 1226, 1413, 1464, 1674
DraI TTTAAA 1 cut(s) 1011
DraIII CACNNNGTG 1 cut(s) 320
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 4 cut(s) 274, 869, 1174, 1326
EarI CTCTTC 4 cut(s) 274, 869, 1174, 1326
Ecl136II GAGCTC 1 cut(s) 1690
Eco130I CCWWGG 5 cut(s) 282, 388, 617, 975, 1506
Eco24I GRGCYC 1 cut(s) 1692
Eco31I GGTCTC 2 cut(s) 299, 1109
Eco47I GGWCC 2 cut(s) 482, 1271
Eco53kI GAGCTC 1 cut(s) 1690
EcoICRI GAGCTC 1 cut(s) 1690
EcoRI GAATTC 1 cut(s) 1705
EcoRII CCWGG 2 cut(s) 92, 1273
EcoT14I CCWWGG 5 cut(s) 282, 388, 617, 975, 1506
EcoT38I GRGCYC 1 cut(s) 1692
ErhI CCWWGG 5 cut(s) 282, 388, 617, 975, 1506
FalI AAGNNNNNCTT 4 cut(s) 968, 1000, 1277, 1309
FaqI GGGAC 2 cut(s) 682, 1232
FbaI TGATCA 2 cut(s) 897, 1464
Fnu4HI GCNGC 5 cut(s) 78, 635, 648, 1032, 1599
FokI GGATG 3 cut(s) 992, 1458, 1523
FriOI GRGCYC 1 cut(s) 1692
Fsp4HI GCNGC 5 cut(s) 78, 635, 648, 1032, 1599
FspBI CTAG 2 cut(s) 1710, 1717
GluI GCNGC 5 cut(s) 78, 635, 648, 1032, 1599
GsuI CTGGAG 3 cut(s) 281, 1371, 1647
HaeIII GGCC 4 cut(s) 5, 287, 622, 989
HapII CCGG 2 cut(s) 666, 1251
HgaI GACGC 1 cut(s) 1418
HincII GTYRAC 1 cut(s) 1320
HindII GTYRAC 1 cut(s) 1320
HindIII AAGCTT 4 cut(s) 69, 587, 769, 1154
HinfI GANTC 3 cut(s) 412, 1646, 1713
HpaII CCGG 2 cut(s) 666, 1251
HphI GGTGA 5 cut(s) 96, 332, 907, 1265, 1558
Hpy166II GTNNAC 3 cut(s) 1213, 1320, 1565
Hpy188I TCNGA 3 cut(s) 60, 157, 1434
Hpy8I GTNNAC 3 cut(s) 1213, 1320, 1565
HpyAV CCTTC 7 cut(s) 190, 553, 1085, 1279, 1448, 1624, 1677
HpyCH4III ACNGT 2 cut(s) 87, 756
HpyF10VI GCNNNNNNNGC 5 cut(s) 77, 340, 470, 725, 1607
KpnI GGTACC 1 cut(s) 536
Ksp22I TGATCA 2 cut(s) 897, 1464
Kzo9I GATC 7 cut(s) 854, 897, 1087, 1226, 1413, 1464, 1674
LmnI GCTCC 5 cut(s) 619, 1192, 1444, 1615, 1687
Lsp1109I GCAGC 5 cut(s) 64, 634, 646, 1043, 1585
LweI GCATC 2 cut(s) 318, 1567
MaeI CTAG 2 cut(s) 1710, 1717
MaeIII GTNAC 2 cut(s) 400, 922
MalI GATC 7 cut(s) 856, 899, 1089, 1228, 1415, 1466, 1676
MboI GATC 7 cut(s) 854, 897, 1087, 1226, 1413, 1464, 1674
MboII GAAGA 7 cut(s) 261, 886, 1161, 1343, 1385, 1526, 1684
MfeI CAATTG 3 cut(s) 723, 906, 1323
MflI RGATCY 3 cut(s) 854, 1226, 1674
MhlI GDGCHC 1 cut(s) 1692
MlsI TGGCCA 1 cut(s) 5
MluCI AATT 9 cut(s) 346, 500, 525, 709, 723, 906, 1323, 1650, 1705
MluNI TGGCCA 1 cut(s) 5
MlyI GAGTC 1 cut(s) 1707
MmeI TCCRAC 1 cut(s) 1265
Mox20I TGGCCA 1 cut(s) 5
MroXI GAANNNNTTC 1 cut(s) 87
MscI TGGCCA 1 cut(s) 5
MseI TTAA 2 cut(s) 630, 1010
MslI CAYNNNNRTG 2 cut(s) 407, 1560
Msp20I TGGCCA 1 cut(s) 5
MspI CCGG 2 cut(s) 666, 1251
MspR9I CCNGG 3 cut(s) 94, 667, 1275
MunI CAATTG 3 cut(s) 723, 906, 1323
Mva1269I GAATGC 3 cut(s) 54, 496, 516
MvaI CCWGG 2 cut(s) 94, 1275
MvnI CGCG 2 cut(s) 1137, 1412
MwoI GCNNNNNNNGC 5 cut(s) 77, 340, 470, 725, 1607
NciI CCSGG 1 cut(s) 667
NcoI CCATGG 2 cut(s) 282, 1506
NdeII GATC 7 cut(s) 854, 897, 1087, 1226, 1413, 1464, 1674
NlaIV GGNNCC 7 cut(s) 229, 534, 615, 990, 1228, 1504, 1530
NmuCI GTSAC 1 cut(s) 400
NspI RCATGY 2 cut(s) 468, 1198
OliI CACNNNNGTG 1 cut(s) 1560
PaqCI CACCTGC 1 cut(s) 1490
PctI GAATGC 3 cut(s) 54, 496, 516
PdmI GAANNNNTTC 1 cut(s) 87
PfeI GAWTC 2 cut(s) 412, 1646
PflMI CCANNNNNTGG 1 cut(s) 304
PfoI TCCNGGA 1 cut(s) 665
PinAI ACCGGT 1 cut(s) 1250
PkrI GCNGC 5 cut(s) 79, 636, 649, 1033, 1600
PleI GAGTC 1 cut(s) 1707
PpsI GAGTC 1 cut(s) 1707
PsiI TTATAA 1 cut(s) 585
Psp124BI GAGCTC 1 cut(s) 1692
Psp6I CCWGG 2 cut(s) 92, 1273
PspGI CCWGG 2 cut(s) 92, 1273
PspN4I GGNNCC 7 cut(s) 229, 534, 615, 990, 1228, 1504, 1530
PspPI GGNCC 3 cut(s) 482, 988, 1271
PstI CTGCAG 2 cut(s) 82, 1447
PsuI RGATCY 3 cut(s) 854, 1226, 1674
RsaI GTAC 3 cut(s) 386, 534, 1249
RsaNI GTAC 3 cut(s) 385, 533, 1248
RseI CAYNNNNRTG 2 cut(s) 407, 1560
SacI GAGCTC 1 cut(s) 1692
SaqAI TTAA 2 cut(s) 630, 1010
SatI GCNGC 5 cut(s) 78, 635, 648, 1032, 1599
Sau3AI GATC 7 cut(s) 854, 897, 1087, 1226, 1413, 1464, 1674
Sau96I GGNCC 3 cut(s) 482, 988, 1271
SchI GAGTC 1 cut(s) 1707
ScrFI CCNGG 3 cut(s) 94, 667, 1275
SduI GDGCHC 1 cut(s) 1692
SfaNI GCATC 2 cut(s) 318, 1567
SfcI CTRYAG 3 cut(s) 78, 858, 1443
SinI GGWCC 2 cut(s) 482, 1271
SmiMI CAYNNNNRTG 2 cut(s) 407, 1560
SmlI CTYRAG 1 cut(s) 1001
SmoI CTYRAG 1 cut(s) 1001
Sse9I AATT 9 cut(s) 346, 500, 525, 709, 723, 906, 1323, 1650, 1705
SsiI CCGC 3 cut(s) 1124, 1137, 1399
SspMI CTAG 2 cut(s) 1710, 1717
SstI GAGCTC 1 cut(s) 1692
StyD4I CCNGG 3 cut(s) 92, 665, 1273
StyI CCWWGG 5 cut(s) 282, 388, 617, 975, 1506
TaaI ACNGT 2 cut(s) 87, 756
TasI AATT 9 cut(s) 346, 500, 525, 709, 723, 906, 1323, 1650, 1705
TfiI GAWTC 2 cut(s) 412, 1646
Tru1I TTAA 2 cut(s) 630, 1010
Tru9I TTAA 2 cut(s) 630, 1010
TscAI CASTG 6 cut(s) 430, 630, 649, 1126, 1228, 1354
TseFI GTSAC 1 cut(s) 400
TseI GCWGC 5 cut(s) 77, 634, 647, 1031, 1598
Tsp45I GTSAC 1 cut(s) 400
TspDTI ATGAA 9 cut(s) 172, 425, 797, 887, 1061, 1298, 1344, 1386, 1527
TspGWI ACGGA 1 cut(s) 1284
TspRI CASTG 6 cut(s) 430, 630, 649, 1126, 1228, 1354
Van91I CCANNNNNTGG 1 cut(s) 304
VpaK11BI GGWCC 2 cut(s) 482, 1271
XapI RAATTY 2 cut(s) 346, 1705
XbaI TCTAGA 1 cut(s) 1709
XceI RCATGY 2 cut(s) 468, 1198
XcmI CCANNNNNNNNNTGG 2 cut(s) 370, 982
XmnI GAANNNNTTC 1 cut(s) 87
XspI CTAG 2 cut(s) 1710, 1717
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.