Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0002515

Physical Location & Seq

Genomic Coordinates Forward (+)

18346499 .. 18365402

Gene Structure 18904 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g27050.t9

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2289 bp

ATGGAAACCGACAAGCCAGTGGATGACCCAGGCTCAGGTACCAAAGCCATGGAGGATAAATACAATGTCGAAGCCACTGAAAACCAAGCCATTGAAGCATTGCGTTTGCCTATTACAGAGGCAGCTGCGATATATGAGCAGATTCTGGCTGTGTTTCCCACTGCAGCAAAGTATTGGAAGCAATATGTGGAGGCACAGATTGCTGTTAATAATGATGATGCTACAAAACAGATATTTAGCCGGTGTTTGTTGATTTGTCTTCAAGTTCCACTTTGGCGATGCTACATTCGTTTCATCAGAAAGGTCAATGACAAGAGGGGGGTAGAGGGTCAAGAAGAGACTAGAAAAGCTTTTGATTTTATGCTCAGTTATGTTGGAGCAGATATAGCGTCTGGCCCTGTGTGGATGGAGTACATCGCTTTTTTAAAGTCGTTGCAGGCCTTAAGCACACAGGAAGAGTCGCAACGGATGACTGCTGTGCGGAAAGCATACCAGAGAGCCATTGTTACTCCTACCCATCACATTGAACAACTTTGGAAGGATTATGAAAGTTTTGAAAATTCTGTCAGCCGTCATCTGGCAAAAGGACTGTTATCTGAATATCAACCAAAATTTAACAGTGCCAGGGCCGTTTATAGGGAGCGGAAGAAGTACTTTGACGAAATTGACTTGAACATGCTTGCTGTACCACCAACTGGTTCTTACAAGGAAGAATTGCAATGGATGGCATGGAAAAAGTTGCTTGGTTTTGAAAAGGGAAATCCACAAAGGATAGACAATGGATCATCCAACAAGCGAATTATATTCACATATGAGCAGTGTCTAATGTATCTATACCATTATCCTGATATATGGTACGACTATGCGATGTGGCATGCAAAAAGTGGATCTATAGATGCTGCAATTAAAGTATTTCAGAGAGCATTGAAGGCTCTTCCTGACTCAGAGATGCTTAGGTATGCTTATGCAGAGCTGGAAGAATCCCGTGGAGCAATCCAGCCTACGAAGAAAATATATGAGAACCTTCTGGGAGACGGTGTTAACACAACTGCCCTTGCTCATATACAGTTTATTCGCTTTTTAAGGAGAACTGAAGGAGTTGAAGCAGCTCGCAAGTACTTTTTAGATGCGCGCAAATCCCCGAACTGCACATATCATGTTTATGTTGCTTATGCAATGGTGGCCTTATGTCTTGACAAGGATCCCAAGATGGCACACAATGTTTTTGAAGCCGGACTGAAACAGTTCATGCACGAGCCTGTATACATTCTTCAATATGCAGATTTTTTAACTCGTTTGAATGATGATAGAAACATTCGGGCCCTGTTTGAGAGGGCATTAAGCTCATTACCACCAGAGAAATCTGTTGAGGTATGGAAGCAATTCACCAAATTCGAGCAAACTTATGGAGATTTGGCTAGCATGTTGAAGGTTGAGCAAAGAAAAAAAGAAGCACTTTCTATAACTGATGAAGAGGGACCTTCATCTTTGGAAAGTTCTTTACAAGAGGTTGTATCTCGTTATAGTTTCATGGATCTTTGGCCCTGCTCCACGAAGGATTTGGACCATTTAGCGCGACAAGAGTGGCTTGCTAAAAATATTAATAAGAAAGCAGAGAAGTCAACTATGCTAAGTGGATCTGAACTTGCAGACAAGGGTTCTACTGGCCTGATAAGCAATTCATCAGTGTCTGCAAAAGTTGTTTATCCAGATACTAACCAAATGGTTATCTATGATCCAAGGCAAAAACCTGGGGTAGCTGGAGTTCTCACTGCTGCTAGCACCTTGTCAAATCCGGTTGTTGCAGCAGTAGGTGGCCAAACAATGAGTGCCTTTGATGAAATACTTAAAGTGACTCCACCTGCTTTGGTAGCCTTTTTAGCAAATTTACCTATCATTGAAGGCCCAACCCCAGACGTGGATATTGTGCTATCAATTTGTTTGCAAAGTGACATACCAGCACCACAGCCTGTAAAGTCAGGGACTGCCCATGTACAATTTCCATCGGTACCTGCTCCTTCTACGAGTGACCTTTCCGTTTCAAGCAAGTCTCATCCCATCCCAAGTGGCTCATCTTTCAAGCCAACGAGGGGGAAACGGAAAAATATAGATAGGAAAGACGAAGATGAAACTACAGTGCAGAGCCAACCACTCCCAACTGATGCTTTCAGGATACGGCAGATCCAGAGGGCTAGCCGTTCTGCTTCGGCTAGCCGCACTGCTTCTCAAACAGGATCTGTTTCATACGGAAGTGCAATTTCAGGAGACTTATCCGGTAGCACTGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000375 GO:0000377 GO:0000398 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006139 GO:0006351 GO:0006353 GO:0006366 GO:0006369 GO:0006378 GO:0006379 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008380 GO:0009058 GO:0009059 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0018130 GO:0019438 GO:0031123 GO:0031124 GO:0031974 GO:0031981 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043631 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0046483 GO:0070013 GO:0071704 GO:0090304 GO:0090305 GO:0090501 GO:0097159 GO:0097659 GO:1901360 GO:1901362 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko03015 map03015

Pfam Domains

Protein Families

Suf TPR_14

Protein Analysis

763

Amino Acids

85.5

Weight (kDa)

7.18

Isoelectric Point (pI)

46.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Suf	PF05843	37 - 521	1.3e-157	Suppressor of forked protein (Suf)
HAT_PRP39_N	PF23240	38 - 183	5.8e-26	PRP39 N-terminal HAT repeat
HAT_PRP39_C	PF23241	237 - 363	9.6e-22	PRP39 C-terminal HAT repeat
HAT_Syf1_CNRKL1_N	PF23233	257 - 329	3.6e-07	Pre-mRNA-splicing factor Syf1/CNRKL1 N-terminal HAT repeat
TPR_14	PF13428	282 - 325	1.2e-07	Tetratricopeptide repeat
HAT_PRP39_N	PF23240	363 - 480	5.1e-06	PRP39 N-terminal HAT repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0002515)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17760
fragaria_vesca	FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_5g27050 FvH4_6g34990
malus_domestica	MD09G1000100.v1.1
prunus_persica	Prupe.1G353000_v2.0.a1
pyrus_communis	pycom08g21780
rosa_chinensis	RchiOBHm_Chr2g0146051 RchiOBHm_Chr7g0218051
rosa_laevigata	RLG00000002420 RLG00000020181
rosa_multiflora	Rmu_sc0000379.1_g000001 Rmu_sc0009440.1_g000001 Rmu_sc0009440.1_g000003 Rmu_sc0014682.1_g000002
rosa_roxburghii	Rroxscaffold_152G00434850 Rroxscaffold_2G00100320 Rroxscaffold_3G00241460
rosa_rugosa	Rorug07G0173100
rosa_samantha	Rh2AG448900 Rh2BG461300 Rh2CG435900 Rh2DG470500 Rh7AG315500 Rh7BG305800 Rh7CG333000 Rh7DG313800 Rh7DG314300
rosa_wichuraiana	Rw2G036660 Rw7G026650 Rw7G026740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1870
Acc36I	ACCTGC	2 cut(s)	1870, 2020
Acc65I	GGTACC	2 cut(s)	38, 2008
AccB1I	GGYRCC	2 cut(s)	38, 2008
AccB7I	CCANNNNNTGG	1 cut(s)	695
AccBSI	CCGCTC	1 cut(s)	643
AccI	GTMKAC	1 cut(s)	1263
AccII	CGCG	2 cut(s)	1132, 1576
AciI	CCGC	3 cut(s)	481, 643, 2215
AclWI	GGATC	9 cut(s)	790, 895, 1196, 1209, 1542, 1645, 1730, 2176, 2242
AcoI	YGGCCR	1 cut(s)	1816
AcsI	RAATTY	4 cut(s)	559, 611, 1391, 1885
AcuI	CTGAAG	1 cut(s)	1113
AfaI	GTAC	8 cut(s)	40, 413, 653, 687, 857, 1118, 1995, 2010
AfiI	CCNNNNNNNGG	6 cut(s)	35, 577, 636, 695, 1918, 2090
AflII	CTTAAG	1 cut(s)	442
AjiI	CACGTC	1 cut(s)	1918
AjnI	CCWGG	3 cut(s)	28, 623, 1750
AluBI	AGCT	6 cut(s)	125, 350, 973, 1109, 1344, 1760
AluI	AGCT	6 cut(s)	125, 350, 973, 1109, 1344, 1760
Alw26I	GTCTC	4 cut(s)	332, 1026, 2055, 2259
AlwI	GGATC	9 cut(s)	790, 895, 1196, 1209, 1542, 1645, 1730, 2176, 2242
AlwNI	CAGNNNCTG	4 cut(s)	145, 1691, 1985, 2237
AoxI	GGCC	9 cut(s)	394, 438, 627, 1182, 1320, 1541, 1666, 1816, 1903
ApaI	GGGCCC	1 cut(s)	1324
ApeKI	GCWGC	7 cut(s)	122, 125, 164, 899, 1106, 1775, 1805
ApoI	RAATTY	4 cut(s)	559, 611, 1391, 1885
AseI	ATTAAT	1 cut(s)	1602
Asp700I	GAANNNNTTC	2 cut(s)	1244, 1382
Asp718I	GGTACC	2 cut(s)	38, 2008
AspLEI	GCGC	3 cut(s)	1132, 1134, 1576
AspS9I	GGNCC	8 cut(s)	395, 627, 1320, 1321, 1478, 1542, 1564, 1904
AsuHPI	GGTGA	1 cut(s)	1378
AsuNHI	GCTAGC	4 cut(s)	1418, 1778, 2192, 2210
AvaII	GGWCC	2 cut(s)	1478, 1564
BaeGI	GKGCMC	1 cut(s)	1324
BalI	TGGCCA	1 cut(s)	1818
BamHI	GGATCC	1 cut(s)	1201
BanI	GGYRCC	2 cut(s)	38, 2008
BanII	GRGCYC	1 cut(s)	1324
BarI	GAAGNNNNNNTAC	2 cut(s)	1254, 1286
BauI	CACGAG	1 cut(s)	1253
BbsI	GAAGAC	1 cut(s)	251
BbvI	GCAGC	7 cut(s)	112, 134, 176, 886, 1118, 1762, 1817
BccI	CCATC	6 cut(s)	400, 525, 718, 1204, 2011, 2066
BceAI	ACGGC	4 cut(s)	555, 614, 2181, 2192
BciT130I	CCWGG	3 cut(s)	30, 625, 1752
BciVI	GTATCC	1 cut(s)	2166
BcoDI	GTCTC	4 cut(s)	332, 1026, 2055, 2259
BfaI	CTAG	5 cut(s)	342, 1419, 1779, 2193, 2211
BfmI	CTRYAG	3 cut(s)	162, 891, 2133
BfrI	CTTAAG	1 cut(s)	442
BfuAI	ACCTGC	2 cut(s)	1870, 2020
BfuI	GTATCC	1 cut(s)	2166
BisI	GCNGC	8 cut(s)	123, 126, 165, 900, 1107, 1776, 1806, 2215
BlsI	GCNGC	8 cut(s)	124, 127, 166, 901, 1108, 1777, 1807, 2216
BmcAI	AGTACT	2 cut(s)	653, 1118
Bme1390I	CCNGG	3 cut(s)	30, 625, 1752
Bme18I	GGWCC	2 cut(s)	1478, 1564
BmgBI	CACGTC	1 cut(s)	1918
BmgT120I	GGNCC	8 cut(s)	395, 627, 1320, 1321, 1478, 1542, 1564, 1904
BmiI	GGNNCC	5 cut(s)	40, 1203, 1322, 1479, 2010
BmrFI	CCNGG	3 cut(s)	30, 625, 1752
BmsI	GCATC	6 cut(s)	208, 269, 886, 939, 1117, 2152
BmtI	GCTAGC	4 cut(s)	1422, 1782, 2196, 2214
BpiI	GAAGAC	1 cut(s)	251
BpmI	CTGGAG	1 cut(s)	1782
Bpu10I	CCTNAGC	2 cut(s)	34, 953
BsaJI	CCNNGG	6 cut(s)	28, 48, 624, 985, 1739, 1751
BsaWI	WCCGGW	2 cut(s)	1795, 2273
BsaXI	ACNNNNNCTCC	2 cut(s)	1023, 1053
Bsc4I	CCNNNNNNNGG	6 cut(s)	35, 577, 636, 695, 1918, 2090
Bse118I	RCCGGY	1 cut(s)	240
Bse1I	ACTGG	4 cut(s)	17, 700, 1669, 2287
Bse3DI	GCAATG	3 cut(s)	98, 725, 1182
BseBI	CCWGG	3 cut(s)	30, 625, 1752
BseDI	CCNNGG	6 cut(s)	28, 48, 624, 985, 1739, 1751
BseGI	GGATG	7 cut(s)	28, 411, 474, 729, 785, 2053, 2058
BseLI	CCNNNNNNNGG	6 cut(s)	35, 577, 636, 695, 1918, 2090
BseMI	GCAATG	3 cut(s)	98, 725, 1182
BseMII	CTCAG	3 cut(s)	48, 379, 957
BseNI	ACTGG	4 cut(s)	17, 700, 1669, 2287
BsePI	GCGCGC	1 cut(s)	1130
BseSI	GKGCMC	1 cut(s)	1324
BseXI	GCAGC	7 cut(s)	112, 134, 176, 886, 1118, 1762, 1817
BsgI	GTGCAG	2 cut(s)	1132, 2159
Bsh1236I	CGCG	2 cut(s)	1132, 1576
BshFI	GGCC	9 cut(s)	396, 440, 629, 1184, 1322, 1543, 1668, 1818, 1905
BshNI	GGYRCC	2 cut(s)	38, 2008
BsiSI	CCGG	4 cut(s)	241, 1233, 1796, 2274
BslFI	GGGAC	2 cut(s)	1491, 1996
BslI	CCNNNNNNNGG	6 cut(s)	35, 577, 636, 695, 1918, 2090
BsmAI	GTCTC	4 cut(s)	332, 1026, 2055, 2259
BsmBI	CGTCTC	1 cut(s)	1026
BsmFI	GGGAC	2 cut(s)	1491, 1996
BsnI	GGCC	9 cut(s)	396, 440, 629, 1184, 1322, 1543, 1668, 1818, 1905
Bsp120I	GGGCCC	1 cut(s)	1320
Bsp1286I	GDGCHC	1 cut(s)	1324
Bsp1407I	TGTACA	1 cut(s)	1993
Bsp143I	GATC	8 cut(s)	782, 887, 1201, 1534, 1637, 1735, 2181, 2234
Bsp19I	CCATGG	1 cut(s)	48
BspACI	CCGC	3 cut(s)	481, 643, 2215
BspANI	GGCC	9 cut(s)	396, 440, 629, 1184, 1322, 1543, 1668, 1818, 1905
BspCNI	CTCAG	3 cut(s)	47, 378, 956
BspFNI	CGCG	2 cut(s)	1132, 1576
BspLI	GGNNCC	5 cut(s)	40, 1203, 1322, 1479, 2010
BspMAI	CTGCAG	1 cut(s)	166
BspMI	ACCTGC	2 cut(s)	1870, 2020
BspOI	GCTAGC	4 cut(s)	1422, 1782, 2196, 2214
BspPI	GGATC	9 cut(s)	790, 895, 1196, 1209, 1542, 1645, 1730, 2176, 2242
BspQI	GCTCTTC	1 cut(s)	939
BspT107I	GGYRCC	2 cut(s)	38, 2008
BspTI	CTTAAG	1 cut(s)	442
BsrBI	CCGCTC	1 cut(s)	643
BsrDI	GCAATG	3 cut(s)	98, 725, 1182
BsrFI	RCCGGY	1 cut(s)	240
BsrGI	TGTACA	1 cut(s)	1993
BsrI	ACTGG	4 cut(s)	17, 700, 1669, 2287
BssAI	RCCGGY	1 cut(s)	240
BssECI	CCNNGG	6 cut(s)	28, 48, 624, 985, 1739, 1751
BssHII	GCGCGC	1 cut(s)	1130
BssMI	GATC	8 cut(s)	782, 887, 1201, 1534, 1637, 1735, 2181, 2234
BssNAI	GTATAC	1 cut(s)	1264
BssSI	CACGAG	1 cut(s)	1253
BssT1I	CCWWGG	2 cut(s)	48, 1739
Bst1107I	GTATAC	1 cut(s)	1264
Bst2BI	CACGAG	1 cut(s)	1253
Bst2UI	CCWGG	3 cut(s)	30, 625, 1752
Bst4CI	ACNGT	6 cut(s)	591, 620, 1037, 1068, 1245, 2137
Bst6I	CTCTTC	4 cut(s)	330, 450, 939, 1467
BstAFI	CTTAAG	1 cut(s)	442
BstAPI	GCANNNNNTGC	1 cut(s)	200
BstAUI	TGTACA	1 cut(s)	1993
BstDEI	CTNAG	5 cut(s)	34, 365, 943, 953, 1631
BstDSI	CCRYGG	2 cut(s)	48, 985
BstF5I	GGATG	7 cut(s)	28, 411, 474, 729, 785, 2053, 2058
BstFNI	CGCG	2 cut(s)	1132, 1576
BstHHI	GCGC	3 cut(s)	1132, 1134, 1576
BstKTI	GATC	8 cut(s)	785, 890, 1204, 1537, 1640, 1738, 2184, 2237
BstMAI	GTCTC	4 cut(s)	332, 1026, 2055, 2259
BstMBI	GATC	8 cut(s)	782, 887, 1201, 1534, 1637, 1735, 2181, 2234
BstMWI	GCNNNNNNNGC	8 cut(s)	95, 200, 386, 929, 1181, 1674, 1871, 1880
BstNI	CCWGG	3 cut(s)	30, 625, 1752
BstNSI	RCATGY	3 cut(s)	679, 878, 1426
BstSCI	CCNGG	3 cut(s)	28, 623, 1750
BstSFI	CTRYAG	3 cut(s)	162, 891, 2133
BstSLI	GKGCMC	1 cut(s)	1324
BstUI	CGCG	2 cut(s)	1132, 1576
BstV1I	GCAGC	7 cut(s)	112, 134, 176, 886, 1118, 1762, 1817
BstV2I	GAAGAC	1 cut(s)	251
BstX2I	RGATCY	6 cut(s)	887, 1201, 1534, 1637, 2181, 2234
BstXI	CCANNNNNNTGG	1 cut(s)	49
BstYI	RGATCY	6 cut(s)	887, 1201, 1534, 1637, 2181, 2234
BstZ17I	GTATAC	1 cut(s)	1264
BsuI	GTATCC	1 cut(s)	2166
BsuRI	GGCC	9 cut(s)	396, 440, 629, 1184, 1322, 1543, 1668, 1818, 1905
BtgI	CCRYGG	2 cut(s)	48, 985
BtgZI	GCGATG	3 cut(s)	292, 400, 881
BtrI	CACGTC	1 cut(s)	1918
BtsCI	GGATG	7 cut(s)	28, 411, 474, 729, 785, 2053, 2058
BtsI	GCAGTG	4 cut(s)	159, 824, 1770, 2217
BveI	ACCTGC	2 cut(s)	1870, 2020
CaiI	CAGNNNCTG	4 cut(s)	145, 1691, 1985, 2237
CfoI	GCGC	3 cut(s)	1132, 1134, 1576
Cfr10I	RCCGGY	1 cut(s)	240
Cfr13I	GGNCC	8 cut(s)	395, 627, 1320, 1321, 1478, 1542, 1564, 1904
CseI	GACGC	1 cut(s)	378
Csp6I	GTAC	8 cut(s)	39, 412, 652, 686, 856, 1117, 1994, 2009
CspCI	CAANNNNNGTGG	2 cut(s)	1848, 1883
CviAII	CATG	9 cut(s)	49, 676, 729, 875, 1157, 1249, 1423, 1531, 1991
CviQI	GTAC	8 cut(s)	39, 412, 652, 686, 856, 1117, 1994, 2009
DdeI	CTNAG	5 cut(s)	34, 365, 943, 953, 1631
DpnI	GATC	8 cut(s)	784, 889, 1203, 1536, 1639, 1737, 2183, 2236
DpnII	GATC	8 cut(s)	782, 887, 1201, 1534, 1637, 1735, 2181, 2234
DraI	TTTAAA	1 cut(s)	426
EaeI	YGGCCR	1 cut(s)	1816
Eam1104I	CTCTTC	4 cut(s)	330, 450, 939, 1467
EarI	CTCTTC	4 cut(s)	330, 450, 939, 1467
Eco130I	CCWWGG	2 cut(s)	48, 1739
Eco147I	AGGCCT	1 cut(s)	440
Eco24I	GRGCYC	1 cut(s)	1324
Eco47I	GGWCC	2 cut(s)	1478, 1564
Eco57I	CTGAAG	1 cut(s)	1113
EcoO109I	RGGNCCY	2 cut(s)	1321, 1478
EcoRII	CCWGG	3 cut(s)	28, 623, 1750
EcoT14I	CCWWGG	2 cut(s)	48, 1739
EcoT38I	GRGCYC	1 cut(s)	1324
ErhI	CCWWGG	2 cut(s)	48, 1739
Esp3I	CGTCTC	1 cut(s)	1026
FaeI	CATG	9 cut(s)	52, 679, 732, 878, 1160, 1252, 1426, 1534, 1994
FalI	AAGNNNNNCTT	8 cut(s)	255, 287, 638, 670, 1440, 1472, 1572, 1604
FaqI	GGGAC	2 cut(s)	1491, 1996
FatI	CATG	9 cut(s)	48, 675, 728, 874, 1156, 1248, 1422, 1530, 1990
FauNDI	CATATG	1 cut(s)	811
FblI	GTMKAC	1 cut(s)	1263
Fnu4HI	GCNGC	8 cut(s)	123, 126, 165, 900, 1107, 1776, 1806, 2215
FokI	GGATG	7 cut(s)	35, 418, 481, 736, 772, 2040, 2045
FriOI	GRGCYC	1 cut(s)	1324
Fsp4HI	GCNGC	8 cut(s)	123, 126, 165, 900, 1107, 1776, 1806, 2215
FspBI	CTAG	5 cut(s)	342, 1419, 1779, 2193, 2211
GlaI	GCGC	3 cut(s)	1131, 1133, 1575
GluI	GCNGC	8 cut(s)	123, 126, 165, 900, 1107, 1776, 1806, 2215
GsuI	CTGGAG	1 cut(s)	1782
HaeIII	GGCC	9 cut(s)	396, 440, 629, 1184, 1322, 1543, 1668, 1818, 1905
HapII	CCGG	4 cut(s)	241, 1233, 1796, 2274
HgaI	GACGC	1 cut(s)	378
HhaI	GCGC	3 cut(s)	1132, 1134, 1576
Hin1II	CATG	9 cut(s)	52, 679, 732, 878, 1160, 1252, 1426, 1534, 1994
Hin6I	GCGC	3 cut(s)	1130, 1132, 1574
HinP1I	GCGC	3 cut(s)	1130, 1132, 1574
HincII	GTYRAC	2 cut(s)	1042, 1623
HindII	GTYRAC	2 cut(s)	1042, 1623
HindIII	AAGCTT	1 cut(s)	348
HinfI	GANTC	5 cut(s)	142, 458, 941, 980, 1855
HpaI	GTTAAC	1 cut(s)	1042
HpaII	CCGG	4 cut(s)	241, 1233, 1796, 2274
HphI	GGTGA	1 cut(s)	1378
Hpy166II	GTNNAC	3 cut(s)	1042, 1264, 1623
Hpy188I	TCNGA	5 cut(s)	299, 598, 918, 946, 1642
Hpy188III	TCNNGA	8 cut(s)	332, 845, 938, 1193, 1709, 2170, 2185, 2262
Hpy8I	GTNNAC	3 cut(s)	1042, 1264, 1623
HpyAV	CCTTC	9 cut(s)	532, 922, 1034, 1088, 1423, 1491, 1549, 1895, 2028
HpyCH4III	ACNGT	6 cut(s)	591, 620, 1037, 1068, 1245, 2137
HpyCH4IV	ACGT	1 cut(s)	1917
HpyF10VI	GCNNNNNNNGC	8 cut(s)	95, 200, 386, 929, 1181, 1674, 1871, 1880
HpyF3I	CTNAG	5 cut(s)	34, 365, 943, 953, 1631
HpySE526I	ACGT	1 cut(s)	1917
Hsp92II	CATG	9 cut(s)	52, 679, 732, 878, 1160, 1252, 1426, 1534, 1994
HspAI	GCGC	3 cut(s)	1130, 1132, 1574
KpnI	GGTACC	2 cut(s)	42, 2012
KspAI	GTTAAC	1 cut(s)	1042
Kzo9I	GATC	8 cut(s)	782, 887, 1201, 1534, 1637, 1735, 2181, 2234
LguI	GCTCTTC	1 cut(s)	939
LmnI	GCTCC	5 cut(s)	377, 640, 989, 1553, 2020
Lsp1109I	GCAGC	7 cut(s)	112, 134, 176, 886, 1118, 1762, 1817
LweI	GCATC	6 cut(s)	208, 269, 886, 939, 1117, 2152
MaeI	CTAG	5 cut(s)	342, 1419, 1779, 2193, 2211
MaeII	ACGT	1 cut(s)	1917
MaeIII	GTNAC	4 cut(s)	505, 1852, 1949, 2027
MalI	GATC	8 cut(s)	784, 889, 1203, 1536, 1639, 1737, 2183, 2236
MbiI	CCGCTC	1 cut(s)	643
MboI	GATC	8 cut(s)	782, 887, 1201, 1534, 1637, 1735, 2181, 2234
MflI	RGATCY	6 cut(s)	887, 1201, 1534, 1637, 2181, 2234
MhlI	GDGCHC	1 cut(s)	1324
MlsI	TGGCCA	1 cut(s)	1818
MluNI	TGGCCA	1 cut(s)	1818
MlyI	GAGTC	3 cut(s)	467, 935, 1849
MmeI	TCCRAC	2 cut(s)	355, 813
Mox20I	TGGCCA	1 cut(s)	1818
MroXI	GAANNNNTTC	2 cut(s)	1244, 1382
MscI	TGGCCA	1 cut(s)	1818
MslI	CAYNNNNRTG	1 cut(s)	1161
Msp20I	TGGCCA	1 cut(s)	1818
MspA1I	CMGCKG	1 cut(s)	125
MspCI	CTTAAG	1 cut(s)	442
MspI	CCGG	4 cut(s)	241, 1233, 1796, 2274
MspR9I	CCNGG	3 cut(s)	30, 625, 1752
MvaI	CCWGG	3 cut(s)	30, 625, 1752
MvnI	CGCG	2 cut(s)	1132, 1576
MwoI	GCNNNNNNNGC	8 cut(s)	95, 200, 386, 929, 1181, 1674, 1871, 1880
NcoI	CCATGG	1 cut(s)	48
NdeI	CATATG	1 cut(s)	811
NdeII	GATC	8 cut(s)	782, 887, 1201, 1534, 1637, 1735, 2181, 2234
NheI	GCTAGC	4 cut(s)	1418, 1778, 2192, 2210
NlaIII	CATG	9 cut(s)	52, 679, 732, 878, 1160, 1252, 1426, 1534, 1994
NlaIV	GGNNCC	5 cut(s)	40, 1203, 1322, 1479, 2010
NmuCI	GTSAC	3 cut(s)	1852, 1949, 2027
NspI	RCATGY	3 cut(s)	679, 878, 1426
PaeI	GCATGC	1 cut(s)	878
PaqCI	CACCTGC	1 cut(s)	1870
PauI	GCGCGC	1 cut(s)	1130
PceI	AGGCCT	1 cut(s)	440
PciSI	GCTCTTC	1 cut(s)	939
PdmI	GAANNNNTTC	2 cut(s)	1244, 1382
PfeI	GAWTC	2 cut(s)	142, 980
PflMI	CCANNNNNTGG	1 cut(s)	695
PkrI	GCNGC	8 cut(s)	124, 127, 166, 901, 1108, 1777, 1807, 2216
PleI	GAGTC	3 cut(s)	466, 935, 1849
PpsI	GAGTC	3 cut(s)	466, 935, 1849
PpuMI	RGGWCCY	1 cut(s)	1478
PshBI	ATTAAT	1 cut(s)	1602
Psp5II	RGGWCCY	1 cut(s)	1478
Psp6I	CCWGG	3 cut(s)	28, 623, 1750
PspGI	CCWGG	3 cut(s)	28, 623, 1750
PspN4I	GGNNCC	5 cut(s)	40, 1203, 1322, 1479, 2010
PspOMI	GGGCCC	1 cut(s)	1320
PspPI	GGNCC	8 cut(s)	395, 627, 1320, 1321, 1478, 1542, 1564, 1904
PspPPI	RGGWCCY	1 cut(s)	1478
PsrI	GAACNNNNNNTAC	2 cut(s)	1749, 1781
PstI	CTGCAG	1 cut(s)	166
PstNI	CAGNNNCTG	4 cut(s)	145, 1691, 1985, 2237
PsuI	RGATCY	6 cut(s)	887, 1201, 1534, 1637, 2181, 2234
PteI	GCGCGC	1 cut(s)	1130
PvuII	CAGCTG	1 cut(s)	125
RsaI	GTAC	8 cut(s)	40, 413, 653, 687, 857, 1118, 1995, 2010
RsaNI	GTAC	8 cut(s)	39, 412, 652, 686, 856, 1117, 1994, 2009
RseI	CAYNNNNRTG	1 cut(s)	1161
SapI	GCTCTTC	1 cut(s)	939
SatI	GCNGC	8 cut(s)	123, 126, 165, 900, 1107, 1776, 1806, 2215
Sau3AI	GATC	8 cut(s)	782, 887, 1201, 1534, 1637, 1735, 2181, 2234
Sau96I	GGNCC	8 cut(s)	395, 627, 1320, 1321, 1478, 1542, 1564, 1904
ScaI	AGTACT	2 cut(s)	653, 1118
SchI	GAGTC	3 cut(s)	467, 935, 1849
ScrFI	CCNGG	3 cut(s)	30, 625, 1752
SduI	GDGCHC	1 cut(s)	1324
SfaNI	GCATC	6 cut(s)	208, 269, 886, 939, 1117, 2152
SfcI	CTRYAG	3 cut(s)	162, 891, 2133
SinI	GGWCC	2 cut(s)	1478, 1564
SmiMI	CAYNNNNRTG	1 cut(s)	1161
SmlI	CTYRAG	1 cut(s)	442
SmoI	CTYRAG	1 cut(s)	442
SphI	GCATGC	1 cut(s)	878
SseBI	AGGCCT	1 cut(s)	440
SsiI	CCGC	3 cut(s)	481, 643, 2215
SspI	AATATT	1 cut(s)	1600
SspMI	CTAG	5 cut(s)	342, 1419, 1779, 2193, 2211
StuI	AGGCCT	1 cut(s)	440
StyD4I	CCNGG	3 cut(s)	28, 623, 1750
StyI	CCWWGG	2 cut(s)	48, 1739
TaaI	ACNGT	6 cut(s)	591, 620, 1037, 1068, 1245, 2137
TaiI	ACGT	1 cut(s)	1920
TaqI	TCGA	2 cut(s)	69, 1395
TatI	WGTACW	4 cut(s)	411, 651, 1116, 1993
TauI	GCSGC	1 cut(s)	2217
TfiI	GAWTC	2 cut(s)	142, 980
TseFI	GTSAC	3 cut(s)	1852, 1949, 2027
TseI	GCWGC	7 cut(s)	122, 125, 164, 899, 1106, 1775, 1805
Tsp45I	GTSAC	3 cut(s)	1852, 1949, 2027
TspGWI	ACGGA	4 cut(s)	481, 2026, 2113, 2262
Van91I	CCANNNNNTGG	1 cut(s)	695
Vha464I	CTTAAG	1 cut(s)	442
VpaK11BI	GGWCC	2 cut(s)	1478, 1564
VspI	ATTAAT	1 cut(s)	1602
XapI	RAATTY	4 cut(s)	559, 611, 1391, 1885
XceI	RCATGY	3 cut(s)	679, 878, 1426
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1558
XmiI	GTMKAC	1 cut(s)	1263
XmnI	GAANNNNTTC	2 cut(s)	1244, 1382
XspI	CTAG	5 cut(s)	342, 1419, 1779, 2193, 2211
ZrmI	AGTACT	2 cut(s)	653, 1118

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.